Cmc01g0022951 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0022951
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr01: 22416749 .. 22417492 (+)
RNA-Seq ExpressionCmc01g0022951
SyntenyCmc01g0022951
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAAAAGAAAGGATTAATAGAGAAATATCTCTAACAAGAGAATCTCGAACCATTTCCCCAGGAATTCTCAAAGAACAGTAACATAAATTTCTTCAGCAACTCAATTTGAAATCAAAAGACAGACAGATCCATAATGCTTCGAAATTTACAAACCTCCACCATATCTTCTCCTCCTCCTCCTCCAAAATTCTTGAGAAATTGCTTCCCAATTTCATACTACACCAACAGCCAATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAATAGACCGCCAATTCCGCCGTCTGGCCGGAACCCCTGCTCTCATTTTTCGCTGCCCGGTGATGGAAGGCATTGCCGTTGATGGATGAAGGGATCGGAGCTCAGGGGAGATTGTGTGCATGTTCTTAATTTCTTGAGGTTCTTTGTTTTTTTACCAACGACCTCTTTTGGCGTAGCCATTAGCAAAACTATAAAATACAACTTTTGCTTACGTCAAATTTCGTTGTAAAATACTAAAATTATTGTTCATCTTCATCATGCTATGAATGATGTTTCATGTTTGTAACGGATCAGCAATAATAAACTCGAAAAAAGCTCTTCCTTTTTA

mRNA sequence

GAGAGAGAAAAGAAAGGATTAATAGAGAAATATCTCTAACAAGAGAATCTCGAACCATTTCCCCAGGAATTCTCAAAGAACAGTAACATAAATTTCTTCAGCAACTCAATTTGAAATCAAAAGACAGACAGATCCATAATGCTTCGAAATTTACAAACCTCCACCATATCTTCTCCTCCTCCTCCTCCAAAATTCTTGAGAAATTGCTTCCCAATTTCATACTACACCAACAGCCAATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAATAGACCGCCAATTCCGCCGTCTGGCCGGAACCCCTGCTCTCATTTTTCGCTGCCCGGTGATGGAAGGCATTGCCGTTGATGGATGAAGGGATCGGAGCTCAGGGGAGATTGTGTGCATGTTCTTAATTTCTTGAGGTTCTTTGTTTTTTTACCAACGACCTCTTTTGGCGTAGCCATTAGCAAAACTATAAAATACAACTTTTGCTTACGTCAAATTTCGTTGTAAAATACTAAAATTATTGTTCATCTTCATCATGCTATGAATGATGTTTCATGTTTGTAACGGATCAGCAATAATAAACTCGAAAAAAGCTCTTCCTTTTTA

Coding sequence (CDS)

ATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAA

Protein sequence

MAFSPFKSPVLLHCASHSPSSAKLRDNYHAPLRQELTDRFCPNDRASASASACDRDGEAD
Homology
[Close]
BLAST of Cmc01g0022951 vs. NCBI nr
Match: KGN44698.1 (hypothetical protein Csa_015514 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-12
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1   MAFSPFK----SPVLLHCASHSPSSAKLRDN-YHAPLRQELTDRFCPNDRASASASACD- 60
           MAFSPFK    SP+LLH ASHSPSS KLRDN  HAP RQELTD FCPN RASASA   D 
Sbjct: 36  MAFSPFKSIPNSPILLHYASHSPSSPKLRDNTTHAPRRQELTDPFCPNGRASASAFDRDG 95

[Close]
BLAST of Cmc01g0022951 vs. ExPASy TrEMBL
Match: A0A0A0K5D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372920 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-12
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1   MAFSPFK----SPVLLHCASHSPSSAKLRDN-YHAPLRQELTDRFCPNDRASASASACD- 60
           MAFSPFK    SP+LLH ASHSPSS KLRDN  HAP RQELTD FCPN RASASA   D 
Sbjct: 36  MAFSPFKSIPNSPILLHYASHSPSSPKLRDNTTHAPRRQELTDPFCPNGRASASAFDRDG 95

The following BLAST results are available for this feature:
BLAST of Cmc01g0022951 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44698.13.2e-1274.24hypothetical protein Csa_015514 [Cucumis sativus][more]
BLAST of Cmc01g0022951 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc01g0022951 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5D01.6e-1274.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372920 PE=4 SV=1[more]
BLAST of Cmc01g0022951 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0022951.1Cmc01g0022951.1mRNA