Cmc01g0022781 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0022781
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	CMiso1.1chr01: 22109721 .. 22110800 (+)
RNA-Seq Expression	Cmc01g0022781
Synteny	Cmc01g0022781

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGCAAGATATTCAGAAGACAACTTTTAGAATGCATGAAGGACATTATGAGTTTCTTGTCATGTCCTTCGGTTTGATCAATGCACCAGCTACTTTCCAGACTTATATGAATACTATTTTCAAACCTTATCAGAGGAAGTTTGTTCTAGTATTCTTCGATGACATATTGGTTTACAGCAAGAATGAGAAAAAGCATGTGAATCATTTGGAAAAGGTTCTTTCAACTTTGAGAGATCATGCATTATATGTTCATAGAAAAAACTGTAGTTTTGCTCGGCTGAAGATTGAATATTTGGGGCATATAATTTCTGGAGGAGTGGAAGTGGATCTAGAAAAAGTCAGATCCATAGCTGATTGGCCGGTACCGACGAATGTTAGAGAAGTTCGTGGATTCCTCGGGTTTATCCGGTTATTACAGAAGGTTTGTGCAGAACTACGGATCCATAGCAGCCCCATTAACCCAGCTACTTAAAAAGGGGGATTCGTGTGGAATAAAGAAGCTGAAGAAGCGTTTGAAAAGTTAAAGAGAACTATGTCATCTCTACCAGTATTAGCTCTTCCCAATTTTGATCAGCCCTTTGAGATCGAAACAGATGCTTCGGGTGTTGGAGTGGGTGCTGTATTGACACAGTTGAACAGGCCTATTGCTTTTTACAGCCGTACATTGTCCATGAGAGATAAAGCAAAACTAGTCTATGAAAGAGAGTTAATAGTTGTGGTTCTTGCTGTCCAACATTGGCGTCCATACTTATTAGGGACAAGGTTTATTGTTAAAACAGATCAGAAGTCACTTAAGTTCCTTTTGGAGCAAAGAGCTATTCAGCCGCAGTATCAGAAATGGGTAGCCAAGTTACTTGAATATTCATTCAAAGTGGTGTATAAACCTGGTCTCGAAAACAGAGCAGCTGATGCCTTGTCAAGGAAACCATCAGAAGTACTGAATTGCGGGATCTCTGCTCCCATCTTAATTGATCTAAAAACTATTAAAGAAGAAGTGGATAAGGATGAGAAGCTGGAGATGTTAATCACTGAGTGGAAGAAAACAATAACCAGAAGCACAATAACTTTTCAGTGA

mRNA sequence

ATGGTGGAGCAAGATATTCAGAAGACAACTTTTAGAATGCATGAAGGACATTATGAGTTTCTTGTCATGTCCTTCGGTTTGATCAATGCACCAGCTACTTTCCAGACTTATATGAATACTATTTTCAAACCTTATCAGAGGAAGTTTGTTCTAGTATTCTTCGATGACATATTGGTTTACAGCAAGAATGAGAAAAAGCATGTGAATCATTTGGAAAAGGTTCTTTCAACTTTGAGAGATCATGCATTATATGTTCATAGAAAAAACTGTAGTTTTGCTCGGCTGAAGATTGAATATTTGGGGCATATAATTTCTGGAGGAGTGGAAGTGGATCTAGAAAAAGTCAGATCCATAGCTGATTGGCCGGTACCGACGAATGTTAGAGAAGTTCGTGGATTCCTCGGGTTTATCCGGTTATTACAGAAGCCCTTTGAGATCGAAACAGATGCTTCGGGTGTTGGAGTGGGTGCTGTATTGACACAGTTGAACAGGCCTATTGCTTTTTACAGCCGTACATTGTCCATGAGAGATAAAGCAAAACTAGTCTATGAAAGAGAGTTAATAGTTGTGGTTCTTGCTGTCCAACATTGGCGTCCATACTTATTAGGGACAAGGTTTATTGTTAAAACAGATCAGAAGTCACTTAAGTTCCTTTTGGAGCAAAGAGCTATTCAGCCGCAGTATCAGAAATGGGTAGCCAAGTTACTTGAATATTCATTCAAAGTGGTGTATAAACCTGGTCTCGAAAACAGAGCAGCTGATGCCTTGTCAAGGAAACCATCAGAAGTACTGAATTGCGGGATCTCTGCTCCCATCTTAATTGATCTAAAAACTATTAAAGAAGAAGTGGATAAGGATGAGAAGCTGGAGATGTTAATCACTGAGTGGAAGAAAACAATAACCAGAAGCACAATAACTTTTCAGTGA

Coding sequence (CDS)

ATGGTGGAGCAAGATATTCAGAAGACAACTTTTAGAATGCATGAAGGACATTATGAGTTTCTTGTCATGTCCTTCGGTTTGATCAATGCACCAGCTACTTTCCAGACTTATATGAATACTATTTTCAAACCTTATCAGAGGAAGTTTGTTCTAGTATTCTTCGATGACATATTGGTTTACAGCAAGAATGAGAAAAAGCATGTGAATCATTTGGAAAAGGTTCTTTCAACTTTGAGAGATCATGCATTATATGTTCATAGAAAAAACTGTAGTTTTGCTCGGCTGAAGATTGAATATTTGGGGCATATAATTTCTGGAGGAGTGGAAGTGGATCTAGAAAAAGTCAGATCCATAGCTGATTGGCCGGTACCGACGAATGTTAGAGAAGTTCGTGGATTCCTCGGGTTTATCCGGTTATTACAGAAGCCCTTTGAGATCGAAACAGATGCTTCGGGTGTTGGAGTGGGTGCTGTATTGACACAGTTGAACAGGCCTATTGCTTTTTACAGCCGTACATTGTCCATGAGAGATAAAGCAAAACTAGTCTATGAAAGAGAGTTAATAGTTGTGGTTCTTGCTGTCCAACATTGGCGTCCATACTTATTAGGGACAAGGTTTATTGTTAAAACAGATCAGAAGTCACTTAAGTTCCTTTTGGAGCAAAGAGCTATTCAGCCGCAGTATCAGAAATGGGTAGCCAAGTTACTTGAATATTCATTCAAAGTGGTGTATAAACCTGGTCTCGAAAACAGAGCAGCTGATGCCTTGTCAAGGAAACCATCAGAAGTACTGAATTGCGGGATCTCTGCTCCCATCTTAATTGATCTAAAAACTATTAAAGAAGAAGTGGATAAGGATGAGAAGCTGGAGATGTTAATCACTGAGTGGAAGAAAACAATAACCAGAAGCACAATAACTTTTCAGTGA

Protein sequence

MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVYSKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISGGVEVDLEKVRSIADWPVPTNVREVRGFLGFIRLLQKPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIVVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITFQ

Homology

[Close]

BLAST of Cmc01g0022781 vs. NCBI nr
Match: KAA0042009.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK17945.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 567.8 bits (1462), Expect = 5.8e-158
Identity = 300/359 (83.57%), Postives = 304/359 (84.68%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVEQDIQKTTFRMHEGHYEFLVMSFGL NAPATFQT MNTIFKPYQRKFVLVFFDDILVY
Sbjct: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLTNAPATFQTLMNTIFKPYQRKFVLVFFDDILVY 60

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD 120
           SKNEKKHVNHLEKVLSTLRDHALYV+RKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD
Sbjct: 61  SKNEKKHVNHLEKVLSTLRDHALYVNRKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD 120

Query: 121 WPVPTNVREVRGFLG------------------FIRLLQK-------------------- 180
           WPVPTNVREVRGFLG                    +LL+K                    
Sbjct: 121 WPVPTNVREVRGFLGLSGYYRRFVQNYGSIAAPLTQLLKKGGFVWNKEAEEAFEKLKRTM 180

Query: 181 -------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV 240
                        PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV
Sbjct: 181 SSLPVLALPNFDQPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV 240

Query: 241 VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE 300
           VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE
Sbjct: 241 VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE 300

Query: 301 NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITFQ 309
           NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKL+MLITEWKKTITRSTITFQ
Sbjct: 301 NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLQMLITEWKKTITRSTITFQ 359

[Close]

BLAST of Cmc01g0022781 vs. NCBI nr
Match: TYK27013.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 441.0 bits (1133), Expect = 8.2e-120
Identity = 232/359 (64.62%), Postives = 267/359 (74.37%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 528 MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTVFKPYLRKFVLVFFDDILVY 587

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
           SKNE  HV HL KVLS+LR+H+L+ ++K CSFA+LK+EYLGHIISG GVEVD +K+RSIA
Sbjct: 588 SKNEDDHVVHLGKVLSSLREHSLHANKKKCSFAQLKVEYLGHIISGKGVEVDPKKIRSIA 647

Query: 121 DWPVPTNVREVRGFLGFI------------------RLLQK------------------- 180
           DWP  TNVRE RGFLG I                  +LL+K                   
Sbjct: 648 DWPTATNVRETRGFLGLIGYYRRFVKHYGSIPAPLTQLLKKGGFAWNKEAEEAFEQLKGA 707

Query: 181 --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                         PFEIETDASGV +GAVLTQ+N+PIAFYS TL+MRD+AK VYEREL+
Sbjct: 708 MISLPVLALPNFEQPFEIETDASGVRIGAVLTQMNKPIAFYSHTLAMRDRAKPVYERELM 767

Query: 241 VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
            VVLAVQ WRP LLGT+F+VKTD+KSLKFLLEQR IQPQYQKWVAKLL YSF+VVYKPGL
Sbjct: 768 AVVLAVQRWRPNLLGTKFVVKTDKKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVVYKPGL 827

Query: 301 ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
           EN+AADALSRKP E++NCG+SAP L+DL TIK+EV+KDE L+  IT  +   T+ +I F
Sbjct: 828 ENKAADALSRKPMEIMNCGMSAPTLVDLTTIKKEVEKDEMLQKTITTEQTDTTKKSIKF 886

[Close]

BLAST of Cmc01g0022781 vs. NCBI nr
Match: KAA0058382.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] >TYK26879.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 434.9 bits (1117), Expect = 5.9e-118
Identity = 230/344 (66.86%), Postives = 257/344 (74.71%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           M E+DI KT F  HEGHYEFLVM FGL NA ATFQ  MN +FKPY RKFVLVFFDDIL+Y
Sbjct: 89  MEEKDIPKTAFGTHEGHYEFLVMLFGLTNASATFQALMNNVFKPYLRKFVLVFFDDILIY 148

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIIS-GGVEVDLEKVRSIA 120
           SKNE++H++HL  VLS LR+H LY  +K CSFA+ +IEYLGHIIS GGVEVD EK+RSI 
Sbjct: 149 SKNEEEHMSHLGIVLSALREHTLYASKKECSFAQSRIEYLGHIISRGGVEVDQEKIRSIV 208

Query: 121 DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
           DWPVP N RE+RGFLG                   I+LL+K                   
Sbjct: 209 DWPVPKNAREIRGFLGLTGYYRRFVHHCGSIAAPLIQLLKKGGLYGTLKLKKPLESSMVS 268

Query: 181 -----------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIVVV 240
                      PFEIETDASGVGVGAVLTQLNRP+AF+S TL+MRD+AKLVYEREL+VVV
Sbjct: 269 LPVLALPNFNQPFEIETDASGVGVGAVLTQLNRPVAFFSHTLAMRDRAKLVYERELMVVV 328

Query: 241 LAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLENR 296
           LAVQ WRPYLLGT+F+VKTDQKSLKFLLEQR IQPQYQKWVAKLL Y F+VVYK GLEN+
Sbjct: 329 LAVQRWRPYLLGTKFVVKTDQKSLKFLLEQRTIQPQYQKWVAKLLGYLFEVVYKSGLENK 388

[Close]

BLAST of Cmc01g0022781 vs. NCBI nr
Match: TYK01195.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 4.7e-115
Identity = 226/359 (62.95%), Postives = 260/359 (72.42%), Query Frame = 0


Query: 1    MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
            MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 665  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVY 724

Query: 61   SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
            SKNE  H+ HL KVLS+LR+H+LY ++K CSFA+LK+EYLGHIISG GVEVD EK+RSIA
Sbjct: 725  SKNEDDHIVHLGKVLSSLREHSLYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIA 784

Query: 121  DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
             WP  TNVRE +GFLG                    +LL+K                   
Sbjct: 785  AWPTTTNVRETQGFLGLTGYNRRFVKHYGSIAAPLTQLLKKGGFTWNKEAEEAFEQLKGA 844

Query: 181  --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                          PFEIETDASGVGVGAVLTQ+N+PIAFYS TL+MRD+AK VYERE +
Sbjct: 845  MISLPVLALPNFEQPFEIETDASGVGVGAVLTQMNKPIAFYSHTLAMRDRAKPVYEREFM 904

Query: 241  VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
             VVLAVQ WRPYLLGT+ +VKT+QKSLKF  EQR IQPQYQKWVAKLL YSF+VVYKP L
Sbjct: 905  AVVLAVQRWRPYLLGTKSVVKTNQKSLKF--EQRTIQPQYQKWVAKLLGYSFEVVYKPSL 964

Query: 301  ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
            EN+AADALSRKP E++NCG+S P L+D  TIKEEV+KDE L+  IT  +   T+ ++ F
Sbjct: 965  ENKAADALSRKPMEIMNCGMSVPTLVDPTTIKEEVEKDEMLQKTITTEQTDTTKKSLKF 1021

[Close]

BLAST of Cmc01g0022781 vs. NCBI nr
Match: KAA0062661.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 4.7e-115
Identity = 226/359 (62.95%), Postives = 260/359 (72.42%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 631 MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVY 690

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
           SKNE  H+ HL KVLS+LR+H+LY ++K CSFA+LK+EYLGHIISG GVEVD EK+RSIA
Sbjct: 691 SKNEDDHIVHLGKVLSSLREHSLYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIA 750

Query: 121 DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
            WP  TNVRE +GFLG                    +LL+K                   
Sbjct: 751 AWPTTTNVRETQGFLGLTGYNRRFVKHYGSIAAPLTQLLKKGGFTWNKEAEEAFEQLKGA 810

Query: 181 --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                         PFEIETDASGVGVGAVLTQ+N+PIAFYS TL+MRD+AK VYERE +
Sbjct: 811 MISLPVLALPNFEQPFEIETDASGVGVGAVLTQMNKPIAFYSHTLAMRDRAKPVYEREFM 870

Query: 241 VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
            VVLAVQ WRPYLLGT+ +VKT+QKSLKF  EQR IQPQYQKWVAKLL YSF+VVYKP L
Sbjct: 871 AVVLAVQRWRPYLLGTKSVVKTNQKSLKF--EQRTIQPQYQKWVAKLLGYSFEVVYKPSL 930

Query: 301 ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
           EN+AADALSRKP E++NCG+S P L+D  TIKEEV+KDE L+  IT  +   T+ ++ F
Sbjct: 931 ENKAADALSRKPMEIMNCGMSVPTLVDPTTIKEEVEKDEMLQKTITTEQTDTTKKSLKF 987

[Close]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44
Identity = 107/312 (34.29%), Postives = 162/312 (51.92%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           M E+ I KT F    GHYE+L M FGL NAPATFQ  MN I +P   K  LV+ DDI+++
Sbjct: 311 MDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIF 370

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIIS-GGVEVDLEKVRSIA 120
           S +  +H+N ++ V + L D  L +    C F + +  +LGHI++  G++ +  KV++I 
Sbjct: 371 STSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIV 430

Query: 121 DWPVPTNVREVRGFLG---------------------------------------FIRL- 180
            +P+PT  +E+R FLG                                       F +L 
Sbjct: 431 SYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLK 490

Query: 181 -------------LQKPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERE 240
                         +K F + TDAS + +GAVL+Q   PI+F SRTL+  +      E+E
Sbjct: 491 ALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKE 550

Query: 241 LIVVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKP 259
           L+ +V A + +R YLLG +F++ +D + L++L   +    + ++W  +L EY FK+ Y  
Sbjct: 551 LLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIK 610

[Close]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-39
Identity = 101/312 (32.37%), Postives = 151/312 (48.40%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           M  + + KT F    GHYE+L M FGL NAPATFQ  MN I +P   K  LV+ DDI+V+
Sbjct: 312 MDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVF 371

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIIS-GGVEVDLEKVRSIA 120
           S +  +H+  L  V   L    L +    C F + +  +LGH+++  G++ + EK+ +I 
Sbjct: 372 STSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 121 DWPVPTNVREVRGFLG---------------------------------------FIRL- 180
            +P+PT  +E++ FLG                                       F +L 
Sbjct: 432 KYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLK 491

Query: 181 -------------LQKPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERE 240
                          K F + TDAS V +GAVL+Q   P+++ SRTL+  +      E+E
Sbjct: 492 YLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKE 551

Query: 241 LIVVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKP 259
           L+ +V A + +R YLLG  F + +D + L +L   +    +  +W  KL E+ F + Y  
Sbjct: 552 LLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIK 611

[Close]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 105/325 (32.31%), Postives = 161/325 (49.54%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           + E D +KT+F ++ G YEF  + FGL NA + FQ  ++ + +    K   V+ DD++++
Sbjct: 287 LAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIF 346

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIIS-GGVEVDLEKVRSIA 120
           S+NE  HV H++ VL  L D  + V ++   F +  +EYLG I+S  G + D EKV++I 
Sbjct: 347 SENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQ 406

Query: 121 DWPVPTNVREVRGFLG-------------------------------------------- 180
           ++P P  V +VR FLG                                            
Sbjct: 407 EYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNE 466

Query: 181 -----FIRL---------------LQKPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSM 240
                F RL                +KPF++ TDAS  G+GAVL+Q  RPI   SRTL  
Sbjct: 467 TQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQ 526

Query: 241 RDKAKLVYERELIVVVLAVQHWRPYLLGTRFI-VKTDQKSLKFLLEQRAIQPQYQKWVAK 260
            ++     EREL+ +V A+   + +L G+R I + TD + L F +  R    + ++W + 
Sbjct: 527 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSY 586

[Close]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-34
Identity = 92/316 (29.11%), Postives = 151/316 (47.78%), Query Frame = 0


Query: 5   DIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVYSKNE 64
           D  K  FR   G +E+LVM +G+  APA FQ ++NTI    +   V+ + DDIL++SK+E
Sbjct: 516 DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65  KKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLG-HIISGGVEVDLEKVRSIADWPV 124
            +HV H++ VL  L++  L +++  C F + +++++G HI   G     E +  +  W  
Sbjct: 576 SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125 PTNVREVRGFLGFIRLLQ------------------------------------------ 184
           P N +E+R FLG +  L+                                          
Sbjct: 636 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185 ----------KPFEIETDASGVGVGAVLTQLN-----RPIAFYSRTLSMRDKAKLVYERE 244
                     K   +ETDAS V VGAVL+Q +      P+ +YS  +S       V ++E
Sbjct: 696 PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245 LIVVVLAVQHWRPYLLGT--RFIVKTDQKSL--KFLLEQRAIQPQYQKWVAKLLEYSFKV 259
           ++ ++ +++HWR YL  T   F + TD ++L  +   E      +  +W   L +++F++
Sbjct: 756 MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

[Close]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-34
Identity = 92/316 (29.11%), Postives = 151/316 (47.78%), Query Frame = 0


Query: 5   DIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVYSKNE 64
           D  K  FR   G +E+LVM +G+  APA FQ ++NTI    +   V+ + DDIL++SK+E
Sbjct: 516 DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65  KKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLG-HIISGGVEVDLEKVRSIADWPV 124
            +HV H++ VL  L++  L +++  C F + +++++G HI   G     E +  +  W  
Sbjct: 576 SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125 PTNVREVRGFLGFIRLLQ------------------------------------------ 184
           P N +E+R FLG +  L+                                          
Sbjct: 636 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185 ----------KPFEIETDASGVGVGAVLTQLN-----RPIAFYSRTLSMRDKAKLVYERE 244
                     K   +ETDAS V VGAVL+Q +      P+ +YS  +S       V ++E
Sbjct: 696 PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245 LIVVVLAVQHWRPYLLGT--RFIVKTDQKSL--KFLLEQRAIQPQYQKWVAKLLEYSFKV 259
           ++ ++ +++HWR YL  T   F + TD ++L  +   E      +  +W   L +++F++
Sbjct: 756 MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

[Close]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL
Match: A0A5A7TKU3 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002420 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.8e-158
Identity = 300/359 (83.57%), Postives = 304/359 (84.68%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVEQDIQKTTFRMHEGHYEFLVMSFGL NAPATFQT MNTIFKPYQRKFVLVFFDDILVY
Sbjct: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLTNAPATFQTLMNTIFKPYQRKFVLVFFDDILVY 60

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD 120
           SKNEKKHVNHLEKVLSTLRDHALYV+RKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD
Sbjct: 61  SKNEKKHVNHLEKVLSTLRDHALYVNRKNCSFARLKIEYLGHIISGGVEVDLEKVRSIAD 120

Query: 121 WPVPTNVREVRGFLG------------------FIRLLQK-------------------- 180
           WPVPTNVREVRGFLG                    +LL+K                    
Sbjct: 121 WPVPTNVREVRGFLGLSGYYRRFVQNYGSIAAPLTQLLKKGGFVWNKEAEEAFEKLKRTM 180

Query: 181 -------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV 240
                        PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV
Sbjct: 181 SSLPVLALPNFDQPFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIV 240

Query: 241 VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE 300
           VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE
Sbjct: 241 VVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLE 300

Query: 301 NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITFQ 309
           NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKL+MLITEWKKTITRSTITFQ
Sbjct: 301 NRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLQMLITEWKKTITRSTITFQ 359

[Close]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL
Match: A0A5D3DTQ1 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00210 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.0e-120
Identity = 232/359 (64.62%), Postives = 267/359 (74.37%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 528 MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTVFKPYLRKFVLVFFDDILVY 587

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
           SKNE  HV HL KVLS+LR+H+L+ ++K CSFA+LK+EYLGHIISG GVEVD +K+RSIA
Sbjct: 588 SKNEDDHVVHLGKVLSSLREHSLHANKKKCSFAQLKVEYLGHIISGKGVEVDPKKIRSIA 647

Query: 121 DWPVPTNVREVRGFLGFI------------------RLLQK------------------- 180
           DWP  TNVRE RGFLG I                  +LL+K                   
Sbjct: 648 DWPTATNVRETRGFLGLIGYYRRFVKHYGSIPAPLTQLLKKGGFAWNKEAEEAFEQLKGA 707

Query: 181 --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                         PFEIETDASGV +GAVLTQ+N+PIAFYS TL+MRD+AK VYEREL+
Sbjct: 708 MISLPVLALPNFEQPFEIETDASGVRIGAVLTQMNKPIAFYSHTLAMRDRAKPVYERELM 767

Query: 241 VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
            VVLAVQ WRP LLGT+F+VKTD+KSLKFLLEQR IQPQYQKWVAKLL YSF+VVYKPGL
Sbjct: 768 AVVLAVQRWRPNLLGTKFVVKTDKKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVVYKPGL 827

Query: 301 ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
           EN+AADALSRKP E++NCG+SAP L+DL TIK+EV+KDE L+  IT  +   T+ +I F
Sbjct: 828 ENKAADALSRKPMEIMNCGMSAPTLVDLTTIKKEVEKDEMLQKTITTEQTDTTKKSIKF 886

[Close]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL
Match: A0A5D3DTU9 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2133G00210 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.8e-118
Identity = 230/344 (66.86%), Postives = 257/344 (74.71%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           M E+DI KT F  HEGHYEFLVM FGL NA ATFQ  MN +FKPY RKFVLVFFDDIL+Y
Sbjct: 89  MEEKDIPKTAFGTHEGHYEFLVMLFGLTNASATFQALMNNVFKPYLRKFVLVFFDDILIY 148

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIIS-GGVEVDLEKVRSIA 120
           SKNE++H++HL  VLS LR+H LY  +K CSFA+ +IEYLGHIIS GGVEVD EK+RSI 
Sbjct: 149 SKNEEEHMSHLGIVLSALREHTLYASKKECSFAQSRIEYLGHIISRGGVEVDQEKIRSIV 208

Query: 121 DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
           DWPVP N RE+RGFLG                   I+LL+K                   
Sbjct: 209 DWPVPKNAREIRGFLGLTGYYRRFVHHCGSIAAPLIQLLKKGGLYGTLKLKKPLESSMVS 268

Query: 181 -----------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELIVVV 240
                      PFEIETDASGVGVGAVLTQLNRP+AF+S TL+MRD+AKLVYEREL+VVV
Sbjct: 269 LPVLALPNFNQPFEIETDASGVGVGAVLTQLNRPVAFFSHTLAMRDRAKLVYERELMVVV 328

Query: 241 LAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGLENR 296
           LAVQ WRPYLLGT+F+VKTDQKSLKFLLEQR IQPQYQKWVAKLL Y F+VVYK GLEN+
Sbjct: 329 LAVQRWRPYLLGTKFVVKTDQKSLKFLLEQRTIQPQYQKWVAKLLGYLFEVVYKSGLENK 388

[Close]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL
Match: A0A5D3BPU7 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00410 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.3e-115
Identity = 226/359 (62.95%), Postives = 260/359 (72.42%), Query Frame = 0


Query: 1    MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
            MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 665  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVY 724

Query: 61   SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
            SKNE  H+ HL KVLS+LR+H+LY ++K CSFA+LK+EYLGHIISG GVEVD EK+RSIA
Sbjct: 725  SKNEDDHIVHLGKVLSSLREHSLYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIA 784

Query: 121  DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
             WP  TNVRE +GFLG                    +LL+K                   
Sbjct: 785  AWPTTTNVRETQGFLGLTGYNRRFVKHYGSIAAPLTQLLKKGGFTWNKEAEEAFEQLKGA 844

Query: 181  --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                          PFEIETDASGVGVGAVLTQ+N+PIAFYS TL+MRD+AK VYERE +
Sbjct: 845  MISLPVLALPNFEQPFEIETDASGVGVGAVLTQMNKPIAFYSHTLAMRDRAKPVYEREFM 904

Query: 241  VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
             VVLAVQ WRPYLLGT+ +VKT+QKSLKF  EQR IQPQYQKWVAKLL YSF+VVYKP L
Sbjct: 905  AVVLAVQRWRPYLLGTKSVVKTNQKSLKF--EQRTIQPQYQKWVAKLLGYSFEVVYKPSL 964

Query: 301  ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
            EN+AADALSRKP E++NCG+S P L+D  TIKEEV+KDE L+  IT  +   T+ ++ F
Sbjct: 965  ENKAADALSRKPMEIMNCGMSVPTLVDPTTIKEEVEKDEMLQKTITTEQTDTTKKSLKF 1021

[Close]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL
Match: A0A5A7VAG8 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001800 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.3e-115
Identity = 226/359 (62.95%), Postives = 260/359 (72.42%), Query Frame = 0


Query: 1   MVEQDIQKTTFRMHEGHYEFLVMSFGLINAPATFQTYMNTIFKPYQRKFVLVFFDDILVY 60
           MVE+DI KT FR HEGHYEFLVM FGL NAPATFQ  MNT+FKPY RKFVLVFFDDILVY
Sbjct: 631 MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVY 690

Query: 61  SKNEKKHVNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLGHIISG-GVEVDLEKVRSIA 120
           SKNE  H+ HL KVLS+LR+H+LY ++K CSFA+LK+EYLGHIISG GVEVD EK+RSIA
Sbjct: 691 SKNEDDHIVHLGKVLSSLREHSLYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIA 750

Query: 121 DWPVPTNVREVRGFLG------------------FIRLLQK------------------- 180
            WP  TNVRE +GFLG                    +LL+K                   
Sbjct: 751 AWPTTTNVRETQGFLGLTGYNRRFVKHYGSIAAPLTQLLKKGGFTWNKEAEEAFEQLKGA 810

Query: 181 --------------PFEIETDASGVGVGAVLTQLNRPIAFYSRTLSMRDKAKLVYERELI 240
                         PFEIETDASGVGVGAVLTQ+N+PIAFYS TL+MRD+AK VYERE +
Sbjct: 811 MISLPVLALPNFEQPFEIETDASGVGVGAVLTQMNKPIAFYSHTLAMRDRAKPVYEREFM 870

Query: 241 VVVLAVQHWRPYLLGTRFIVKTDQKSLKFLLEQRAIQPQYQKWVAKLLEYSFKVVYKPGL 300
            VVLAVQ WRPYLLGT+ +VKT+QKSLKF  EQR IQPQYQKWVAKLL YSF+VVYKP L
Sbjct: 871 AVVLAVQRWRPYLLGTKSVVKTNQKSLKF--EQRTIQPQYQKWVAKLLGYSFEVVYKPSL 930

Query: 301 ENRAADALSRKPSEVLNCGISAPILIDLKTIKEEVDKDEKLEMLITEWKKTITRSTITF 308
           EN+AADALSRKP E++NCG+S P L+D  TIKEEV+KDE L+  IT  +   T+ ++ F
Sbjct: 931 ENKAADALSRKPMEIMNCGMSVPTLVDPTTIKEEVEKDEMLQKTITTEQTDTTKKSLKF 987

[Close]

BLAST of Cmc01g0022781 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 68  VNHLEKVLSTLRDHALYVHRKNCSFARLKIEYLG--HIISG-GVEVDLEKVRSIADWPVP 127
           +NHL  VL     H  Y +RK C+F + +I YLG  HIISG GV  D  K+ ++  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 128 TNVREVRGFLG 136
            N  E+RGFLG
Sbjct: 61  KNTTELRGFLG 71

The following BLAST results are available for this feature:

BLAST of Cmc01g0022781 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042009.1	5.8e-158	83.57	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK17945.1 Tran...	[more]
TYK27013.1	8.2e-120	64.62	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0058382.1	5.9e-118	66.86	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] >TYK26879.1 Transposon T...	[more]
TYK01195.1	4.7e-115	62.95	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0062661.1	4.7e-115	62.95	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0022781 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.2e-44	34.29	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.5e-39	32.37	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10401	9.6e-39	32.31	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P0CT41	5.5e-34	29.11	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.5e-34	29.11	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0022781 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKU3	2.8e-158	83.57	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DTQ1	4.0e-120	64.62	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3DTU9	2.8e-118	66.86	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3BPU7	2.3e-115	62.95	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7VAG8	2.3e-115	62.95	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cmc01g0022781 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-11	47.89	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..29 e-value: 3.0E-36 score: 126.7
None	No IPR available	GENE3D	3.10.20.370		coord: 140..210 e-value: 1.3E-7 score: 33.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 142..287
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..138
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 142..287 coord: 3..138
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 145..260 e-value: 8.07228E-48 score: 154.573
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..104 e-value: 1.41061E-42 score: 142.734
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..104 e-value: 3.0E-36 score: 126.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 14..104 e-value: 3.2E-19 score: 69.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..104 score: 11.663481
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 141..238 e-value: 2.5E-26 score: 92.0
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0022781.1	Cmc01g0022781.1	mRNA