Cmc01g0022551 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0022551
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease T(2)
Location	CMiso1.1chr01: 21856673 .. 21858957 (+)
RNA-Seq Expression	Cmc01g0022551
Synteny	Cmc01g0022551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAGTGATTGTTGCTTTTGCTAGTTGTATTGTATAAATAAATTTAGCATTTTTGGTCTCCATAGAGTTGTCGTTGTGTTGGGGGGTGGAGCAATTTACGGATCACCATGCTCTCTCTCTCCGCCATTCCCATCATATTTCTTCTTCAATTCACCATATTTCTTGCATCAAATACCTTGAATCATGCTTCAGGTGCCGTAATTTTCCAGACCAAGGACGGTCGAGAGCAGAGAGAATTCGATTACTTCAAATTGGCGCTACAATGGCCTGGTACTATCTGCAAGAGCACTCGCCATTGTTGTTCCTCCAACGCATGTTGCAATCGGTGATTGCCTCTTCTATTTTTCCTACCATTTAGATATTAGATTTACCCCCTTTAGAATAATGCTTAATTCATCCTTCCCTTTTGTTTTAGGATTCTGTTTAGTTGTTATTTGCTGTAAAATTTGTTGCTTGATGTGAAAAAGAGGTAGAAATTACGTAGTTTGTGTATTATGCATCTTCGTAACTTCCGCCTTCTTTTCGCTCAGTTGTTGGATATGATTTTGGTGGGTGATAGGGAATCAAAGTGAAATGTCAAAAAGTACTGATATACCTGATTTTCATATCTTGGGAAAGTATGCGACACCCTTTAGATATCCTAGATTGGTCACCCACAATTTCCCTAGTTTATAGTGTACCTTTTGTGTCATCTATTAATTTTGGAAGACTTCTTCTATAGGAGAGATGCTGGACCTTCAACTTTTTGTACTAGAAAAGAAAATGATTAGTGCCTCATTTTTGAATTGATGGCTTTATGTATGAACAACAGGGTTTGCCTCTTTCAGTCTGTTAGGATATCCTTTTCACTCTATATTTAATTAGGCTTCTTCCAGGTTCCTCTTTATTGAATGTAATAAAACTCTCTCTAGTTGTTTATTGAATGTAAGGCTGTTAAATACATTTAAGTTATAGTAGCTGTCCAATAACCTTTCATGGATTTAAATTTGAGCATCTTTTTGCACCAACATCTACATTTCATGTTATTGCCATTAGGCAATTGGGCAGTTCAGCGTTGAAGGAATAACAGAGATGACAAAAAAAAGTAGCTGAGAAAAAGGTTGTTAGAGAACATTGATAGAATAAGAATTTAAAGTTTTTGTCTATCTGTTGTAACTTGTTTTCATATTTTCTTGAGCGTTCTAAATTCTATGGATGTTCTTTTTCATTGTTCATAAACTTACATTCGTTTTATCTCTTCTTTGGTAGATCTGGTGCTTTTGCTGACTTTACTATTCGTAAGTTGAAGATATGATTGCATTGCTTTCACAATTCCAGACTAAGCACAAACAACTTGATACGGAATGGAGATATATAGATACGACGACAATACATTTTAAGAATACACATGATTTTAATATCTTCATGCATCTCAATCATTCTCATTTTCAAAATATTTTTCAATTTATGATATATTACATTTGACAGAGAGTGAAACAAGCAGTAAACATGTGATTTTTGAAGAAGCTGAAGACATTTTTCTAGTGGTGCAATGCCCTACAACGAGATATTTGATAAGCTCTATAACCAAATTGACGTTTCTGTAAATGATTCAATATTTCATGAATAAAATAAAGTTGTGCATGCTCATGTACTGATATCAGTTAAAATAGTTTGATGTATATAGACCTCACAACTTATAGTCTCTTGCTTGTGTGATAGATGGGTTATGGCCTGATTACAATGATGGAACATGGCCTGCATGTTGCAATGGAAAAATTTTTGATGAGAAGGAGGTATGTTATTAAAATTAGGCTGTTGATATCCGAAGATATATTATCTGTACAAAAATTGGATCTGGGTAGCCCTATTTCTTCAAATGTTTAAATAGTTGCAACCATGCTAGGCTCATCCTCAAAAGCTTGAACCAAGAAACCCATGTATCTTATGGTAAAGCATTAGTGCAAGTTGAAGAGCTAAAACAAAAAAATTTCTGCCTGATTTTCATATGTTACTGTTAGTTTTATATTGATCATTGTGCTGTTTAATTTGTTCTTGTAATTGATACATTGTTTGTGATAAGTCATTTTTGTAACATCTTGCATCTTTTAATCTTGCAGATTCGTACTTTACTTGATCCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCTTCGACTTGCCATGGTTCGAAGGGATCATTTTGGGCTCATGAGGTGACCATCACTTATACAAGACATATTTGGTGTAAATTTGCACTTATGATACCCATGTTTTAACTGATGGTTCTTTTTTCCCCC

mRNA sequence

TATAGTGATTGTTGCTTTTGCTAGTTGTATTGTATAAATAAATTTAGCATTTTTGGTCTCCATAGAGTTGTCGTTGTGTTGGGGGGTGGAGCAATTTACGGATCACCATGCTCTCTCTCTCCGCCATTCCCATCATATTTCTTCTTCAATTCACCATATTTCTTGCATCAAATACCTTGAATCATGCTTCAGGTGCCGTAATTTTCCAGACCAAGGACGGTCGAGAGCAGAGAGAATTCGATTACTTCAAATTGGCGCTACAATGGCCTGGTACTATCTGCAAGAGCACTCGCCATTGTTGTTCCTCCAACGCATGTTGCAATCGATCTGGTGCTTTTGCTGACTTTACTATTCATGGGTTATGGCCTGATTACAATGATGGAACATGGCCTGCATGTTGCAATGGAAAAATTTTTGATGAGAAGGAGATTCGTACTTTACTTGATCCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCTTCGACTTGCCATGGTTCGAAGGGATCATTTTGGGCTCATGAGGTGACCATCACTTATACAAGACATATTTGGTGTAAATTTGCACTTATGATACCCATGTTTTAACTGATGGTTCTTTTTTCCCCC

Coding sequence (CDS)

ATGCTCTCTCTCTCCGCCATTCCCATCATATTTCTTCTTCAATTCACCATATTTCTTGCATCAAATACCTTGAATCATGCTTCAGGTGCCGTAATTTTCCAGACCAAGGACGGTCGAGAGCAGAGAGAATTCGATTACTTCAAATTGGCGCTACAATGGCCTGGTACTATCTGCAAGAGCACTCGCCATTGTTGTTCCTCCAACGCATGTTGCAATCGATCTGGTGCTTTTGCTGACTTTACTATTCATGGGTTATGGCCTGATTACAATGATGGAACATGGCCTGCATGTTGCAATGGAAAAATTTTTGATGAGAAGGAGATTCGTACTTTACTTGATCCCCTGAAGAAATATTGGCCATCTTTGAGTTGTAGTTCACCTTCGACTTGCCATGGTTCGAAGGGATCATTTTGGGCTCATGAGGTGACCATCACTTATACAAGACATATTTGGTGTAAATTTGCACTTATGATACCCATGTTTTAA

Protein sequence

MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKFALMIPMF

Homology

[Close]

BLAST of Cmc01g0022551 vs. NCBI nr
Match: XP_008447208.1 (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKF 155
           SLSCSSPSTCHGSKGSFWAHE    + +H  C +
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE----WEKHGTCSY 150

[Close]

BLAST of Cmc01g0022551 vs. NCBI nr
Match: TYK17921.1 (ribonuclease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.3 bits (778), Expect = 6.3e-79
Identity = 143/157 (91.08%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDG+EQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGQEQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGK FDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKNFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKFALM 158
           SLSCSSPSTCHGSKGSFWAHE        I C+F  M
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHESLSL----IGCEFVTM 153

[Close]

BLAST of Cmc01g0022551 vs. NCBI nr
Match: KAA0041985.1 (ribonuclease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.3 bits (778), Expect = 6.3e-79
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDG+EQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGQEQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGK FDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKNFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHE 142
           SLSCSSPSTCHGSKGSFWAHE
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE 141

[Close]

BLAST of Cmc01g0022551 vs. NCBI nr
Match: XP_004148942.1 (ribonuclease 2 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.7e-74
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPI+FLLQFTIF++S   NHASGA+IF TKDG+EQREFDYFKLALQWPGT+CK 
Sbjct: 1   MLSLSAIPILFLLQFTIFISSTPFNHASGAIIFHTKDGQEQREFDYFKLALQWPGTVCKG 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSN CCNRSGAF DFTIHGLWPDYNDGTWPACCNGKIFDEKEI TLLDPLKKYWP
Sbjct: 61  TRHCCSSNGCCNRSGAFGDFTIHGLWPDYNDGTWPACCNGKIFDEKEILTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKF 155
           SLSCSSPSTCHGSKGSFWAHE    + +H  C +
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE----WEKHGTCSY 150

[Close]

BLAST of Cmc01g0022551 vs. NCBI nr
Match: XP_038900059.1 (ribonuclease 2-like [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 6.5e-68
Identity = 120/154 (77.92%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           ML LS +P IFLLQF++ LAS +LN  S A+IF  KDGR+QREFDYFKLALQWPGTICK+
Sbjct: 1   MLPLSVVPFIFLLQFSLSLASTSLNQPSDAIIFPIKDGRQQREFDYFKLALQWPGTICKA 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACC GK F+EKEI TLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCAGKKFNEKEIHTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKF 155
           SLSC+SPSTCHG+KGSFWAHE    + +H  C +
Sbjct: 121 SLSCNSPSTCHGAKGSFWAHE----WEKHGTCSY 150

[Close]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-44
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 39  REQREFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACC 98
           R QREFDYF L+LQWPGT C+ TRHCCS NACC  S A   FTIHGLWPDYNDG+WP+CC
Sbjct: 27  RSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCC 86

Query: 99  NGKIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
               F EKEI TL+D L+KYWPSLSC SPS+C+G KGSFW HE
Sbjct: 87  YRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE 129

[Close]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-19
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 43  EFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCN-GK 102
           +FD+F    QWPG+ C + + CC  N+        ADF IHGLWP+Y DGT+P+ C+  K
Sbjct: 29  DFDFFYFVQQWPGSYCDTQKKCCYPNS----GKPAADFGIHGLWPNYKDGTYPSNCDASK 88

Query: 103 IFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
            FD   I  LL  +KK WP+L+C S     GS  +FW HE
Sbjct: 89  PFDSSTISDLLTSMKKSWPTLACPS-----GSGEAFWEHE 119

[Close]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 42  REFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCN-G 101
           ++FD+F    QWPG+ C + + CC            ADF IHGLWP+ NDGT+P+ C+  
Sbjct: 27  KDFDFFYFVQQWPGSYCDTKQSCCYPTT----GKPAADFGIHGLWPNNNDGTYPSNCDPN 86

Query: 102 KIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
             +D+ +I  L+  +++ WP+L+C S     GS  +FW+HE
Sbjct: 87  SPYDQSQISDLISSMQQNWPTLACPS-----GSGSTFWSHE 118

[Close]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.1e-17
Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 42  REFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCN-G 101
           ++FD+F   LQWPG  C S   CC            ADF IHGLWP+Y  G WP  CN  
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQT----GKPAADFGIHGLWPNYKTGGWPQNCNPD 79

Query: 102 KIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
             FD+  +  L+  L++ WP+LSC S     G K  FW HE
Sbjct: 80  SRFDDLRVSDLMSDLQREWPTLSCPSND---GMK--FWTHE 111

[Close]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-16
Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 42  REFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGK 101
           ++FD+F    QWP + C + R CC             DF+IHGLWP+Y DG WP  C+ +
Sbjct: 26  QDFDFFYFVQQWPASYCDTRRSCCYPTT----GKPDEDFSIHGLWPNYKDGKWPQNCDRE 85

Query: 102 -IFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
              DE E   L+  ++K WPSL+C S     G K  FW+HE
Sbjct: 86  SSLDESEFSDLISTMEKNWPSLACPSSD---GLK--FWSHE 117

[Close]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL
Match: A0A1S3BHR4 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103489711 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.4e-81
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKF 155
           SLSCSSPSTCHGSKGSFWAHE    + +H  C +
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE----WEKHGTCSY 150

[Close]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL
Match: A0A5A7TKN5 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004250 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDG+EQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGQEQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGK FDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKNFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHE 142
           SLSCSSPSTCHGSKGSFWAHE
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE 141

[Close]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL
Match: A0A5D3D100 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002160 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79
Identity = 143/157 (91.08%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDG+EQREFDYFKLALQWPGTICKS
Sbjct: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGQEQREFDYFKLALQWPGTICKS 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGK FDEKEIRTLLDPLKKYWP
Sbjct: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKNFDEKEIRTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKFALM 158
           SLSCSSPSTCHGSKGSFWAHE        I C+F  M
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHESLSL----IGCEFVTM 153

[Close]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL
Match: A0A0A0K5E4 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_7G374550 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 129/154 (83.77%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MLSLSAIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKS 60
           MLSLSAIPI+FLLQFTIF++S   NHASGA+IF TKDG+EQREFDYFKLALQWPGT+CK 
Sbjct: 1   MLSLSAIPILFLLQFTIFISSTPFNHASGAIIFHTKDGQEQREFDYFKLALQWPGTVCKG 60

Query: 61  TRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWP 120
           TRHCCSSN CCNRSGAF DFTIHGLWPDYNDGTWPACCNGKIFDEKEI TLLDPLKKYWP
Sbjct: 61  TRHCCSSNGCCNRSGAFGDFTIHGLWPDYNDGTWPACCNGKIFDEKEILTLLDPLKKYWP 120

Query: 121 SLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKF 155
           SLSCSSPSTCHGSKGSFWAHE    + +H  C +
Sbjct: 121 SLSCSSPSTCHGSKGSFWAHE----WEKHGTCSY 150

[Close]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL
Match: A0A6J1JVW6 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111488355 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.4e-62
Identity = 112/151 (74.17%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 7   IPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKSTRHCCS 66
           IP IFLLQFT+ +AS +LN +S A+I Q KDGREQRE DYFKL LQWPGT+CK T  CCS
Sbjct: 2   IPFIFLLQFTVSVASTSLNDSSDAIISQIKDGREQRELDYFKLTLQWPGTVCKGTDSCCS 61

Query: 67  SNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWPSLSCSS 126
           SNACCNRSG FADFTIHGLWPDYNDGTWP+CCNG  FDEKEI TLLDPLKKYWPSLSCSS
Sbjct: 62  SNACCNRSGGFADFTIHGLWPDYNDGTWPSCCNGTSFDEKEIHTLLDPLKKYWPSLSCSS 121

Query: 127 PSTCHGSKGSFWAHEVTITYTRHIWCKFALM 158
            STCHG KGSFWAHE    + +H  C + ++
Sbjct: 122 -STCHGGKGSFWAHE----WEKHGTCSYPVI 147

[Close]

BLAST of Cmc01g0022551 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 180.6 bits (457), Expect = 9.7e-46
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 39  REQREFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACC 98
           R QREFDYF L+LQWPGT C+ TRHCCS NACC  S A   FTIHGLWPDYNDG+WP+CC
Sbjct: 27  RSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCC 86

Query: 99  NGKIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
               F EKEI TL+D L+KYWPSLSC SPS+C+G KGSFW HE
Sbjct: 87  YRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE 129

[Close]

BLAST of Cmc01g0022551 vs. TAIR 10
Match: AT2G39780.2 (ribonuclease 2 )

HSP 1 Score: 180.6 bits (457), Expect = 9.7e-46
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 39  REQREFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACC 98
           R QREFDYF L+LQWPGT C+ TRHCCS NACC  S A   FTIHGLWPDYNDG+WP+CC
Sbjct: 27  RSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCC 86

Query: 99  NGKIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
               F EKEI TL+D L+KYWPSLSC SPS+C+G KGSFW HE
Sbjct: 87  YRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE 129

[Close]

BLAST of Cmc01g0022551 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 39  REQREFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACC 98
           R Q +FD+F   LQWPG  C ++R CC   +        ADF IHGLWP+YN G+WP+ C
Sbjct: 23  RPQEDFDFFYFVLQWPGAYCDTSRACCYPTS----GKPAADFGIHGLWPNYNGGSWPSNC 82

Query: 99  N-GKIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHEVTITYTRHIWCKFALM 158
           +    FD  +I  L+  LKK WP+LSC S         +FW HE    + +H  C  ++M
Sbjct: 83  DPDSQFDRSQISDLVSSLKKNWPTLSCPS-----NEGFNFWEHE----WEKHGTCSESVM 129

[Close]

BLAST of Cmc01g0022551 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 43  EFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCN-GK 102
           +FD+F    QWPG+ C + + CC  N+        ADF IHGLWP+Y DGT+P+ C+  K
Sbjct: 29  DFDFFYFVQQWPGSYCDTQKKCCYPNS----GKPAADFGIHGLWPNYKDGTYPSNCDASK 88

Query: 103 IFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
            FD   I  LL  +KK WP+L+C S     GS  +FW HE
Sbjct: 89  PFDSSTISDLLTSMKKSWPTLACPS-----GSGEAFWEHE 119

[Close]

BLAST of Cmc01g0022551 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-18
Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 42  REFDYFKLALQWPGTICKSTRHCCSSNACCNRSGAFADFTIHGLWPDYNDGTWPACCN-G 101
           ++FD+F   LQWPG  C S   CC            ADF IHGLWP+Y  G WP  CN  
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQT----GKPAADFGIHGLWPNYKTGGWPQNCNPD 79

Query: 102 KIFDEKEIRTLLDPLKKYWPSLSCSSPSTCHGSKGSFWAHE 142
             FD+  +  L+  L++ WP+LSC S     G K  FW HE
Sbjct: 80  SRFDDLRVSDLMSDLQREWPTLSCPSND---GMK--FWTHE 111

The following BLAST results are available for this feature:

BLAST of Cmc01g0022551 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447208.1	1.9e-80	92.86	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
TYK17921.1	6.3e-79	91.08	ribonuclease 2-like [Cucumis melo var. makuwa]	[more]
KAA0041985.1	6.3e-79	98.58	ribonuclease 2-like [Cucumis melo var. makuwa]	[more]
XP_004148942.1	2.7e-74	83.77	ribonuclease 2 [Cucumis sativus]	[more]
XP_038900059.1	6.5e-68	77.92	ribonuclease 2-like [Benincasa hispida]	[more]

BLAST of Cmc01g0022551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42814	1.4e-44	71.84	Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1	[more]
P42813	2.6e-19	45.00	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80022	2.4e-17	38.61	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42815	7.1e-17	42.57	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
P80196	2.7e-16	40.59	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]

BLAST of Cmc01g0022551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHR4	9.4e-81	92.86	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103489711 PE=3 SV=1	[more]
A0A5A7TKN5	3.0e-79	98.58	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004...	[more]
A0A5D3D100	3.0e-79	91.08	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00...	[more]
A0A0A0K5E4	1.3e-74	83.77	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_7G374550 PE=3 SV=1	[more]
A0A6J1JVW6	4.4e-62	74.17	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111488355 PE=3 SV=1	[more]

BLAST of Cmc01g0022551 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39780.1	9.7e-46	71.84	ribonuclease 2	[more]
AT2G39780.2	9.7e-46	71.84	ribonuclease 2	[more]
AT1G14220.1	2.9e-21	40.83	Ribonuclease T2 family protein	[more]
AT2G02990.1	1.8e-20	45.00	ribonuclease 1	[more]
AT1G26820.1	5.0e-18	42.57	ribonuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 44..141 e-value: 1.6E-19 score: 70.7
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 27..152
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 40..158 e-value: 5.0E-35 score: 123.4
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 43..141
None	No IPR available	PANTHER	PTHR11240:SF53	RIBONUCLEASE 2-LIKE ISOFORM X1	coord: 27..152
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 80..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0022551.1	Cmc01g0022551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding