Cmc01g0022471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0022471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr01: 21748072 .. 21750790 (+)
RNA-Seq Expression	Cmc01g0022471
Synteny	Cmc01g0022471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTGACGTAAATAAGCAGACACGAGAGATACAAACCCTCGTAGCTTAGAGGGCGGCATCATATTTGTGCATTGTTAGTTTTGGGCCAACGTCTTTGAGAACGTACCAAGAACTACAAATCTGCGGCGAAAAGAGAGTTAGGGTTTAACTTAAGTTGTTGGGTCACGCAATTGAGGACGGCAGCTTCAGCCTTCAACCATTCCGATTAGGACTACTCCCCAAATTTCTCGTTGAACATGGCTTTCAAGACCAACACCGTTTCTTCCGCTACTTCTGCTGTTGCAATTTCTTCCGAAGCTAAGCTCTTTTCCTCTCTATTTACTCACTCTCCTCCCGTTCCATCATCAAATCCCCAAATTTCCTCTGCAAATAATTCTAAGTCCCTACATGCATCACCGGAGCGCAATTCCTTTCAACACGGGATTCCAATGTTCCTACACAAGTGCAAGACAGGTAGCATCTCTGTAACTCAAGCACACCAATTCTTTGACCTAATGATGCGTTCAATCTTTTCTTTCAATCGTTTACTTGCTGGACTTGCTAAGATTGAGCATTACTCTCAAGTGTTTTCTCTCTATAAAGAAATGCACCTTGCTGGACTTTCGCCCGATTTACTCACACTGAATATATTGATTAATTGCCTTTGTAATGTGAATCGGATTAACGAAGGTCTCGCGGCCATGGCGGGGATTATGAGGAGAGGTTACATTCCTGATGAAGTGACATTTACTACCTTGATTAAGGGCTTGTGTGTGCAGCATAGGATTATTGAAGCTACTAAGCTATTTATGAGAATGCAAAAGTTAGGTTGCACACCTAATGTGGTTACTTATGGAACTTTGATCAAGGGCCTATGTGCTATAGGGAATATTAACCTCGCACTTAAGTGGCATCAAGAAATGCTCAATGACACTAGTCCATATGTATTTAATTGTAGGCCTAATGTTATTTCCTACAGTATCATCATAGATGGGCTTTGTAAGGTTGGAAATTGGGAGGAGGCTATATGTTTATTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGTTGTCACATTTAGTGTGTTGATTGATATGCTTTGCAAGGAAGGACAGGTTATCGAAGCTAAGAAGTTGCTAGAGATGATGATTCAGATTGGTATTGTTCCTAATTTGTTTACTTACACTTCATTGATTAAGGGGTTTTGTTTGGCTGGTGACTTGAATAGTGCCAAGGAGTTGTTTGTTAGTATGCCAAGTAAGGGATATGAAGCTGATGTGATTAGTTACAATATGTTAATCAATGGGTATTGTAAAAACTTGAAAGTGGAAGAAGCAATGAAGCTTTACAGTGAAATGCTTCATGTGGGAATGTGGCCAGATATGAAAACATCTGGTGTCTTGTTAAAAGCGCTTTTTCTTGCCGGCAAGGTTAATGATGCAAAGGAACTATTTCGTGTCATTAAACCTTATGCTATTCCTGAAGATTTATGTATATGTTGTATTTTCTTAGATGGGTTGTGTAAGAATGGTTGTTTTTTTGAAGCGATGAAACTTTTTAATGAACTAAAATCTTACAACATGAAATTGGACATTGAAACCTTTGGTTGTCTAATTGATGGTCTGTGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTATTTGATAAACTATCCAAGGAAGGGATTCAACCGGATGCTATGGCTTATACCAGTATGATCCATGGGTTTTGTAAGGAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTTCTCCCGACTTAATTACTTATAGTATCCTTATGCGTGGTTTCTTCGAGAGTAATAAATTAGAGAAGGTGGTTCAACTCCTCCATAGGATGATTGAAAAGGATGTGTGGCCAGATGCTGGAATTTATGCTATAGTTGAAGACATGGTTTGCAAAGATGAAAAATATAAAGAATGGCTAGACTTGCTTCAAAGCTTTCTTGTCCAAAAGCATCGGAATGCCTATTTATAGACTTAGAAGCTATATGACTTGGAAATTTCTAGTCAGTTTCGAGAAAGAATGAAACACATTGGTTTCCATTTTCCATCTCTGTTATTAAACGAATATTTGAGTTATTCTTCACGAGCAGCATTCGTAGCGAGTTTGTTAAGAAATGGAGAGAGAGAGAGAGAGACTGACAGTGGAGTAATTATACTTGGGAGAATAGAAATCGCAAATCTTTTCCTAGAAAAGCTCAACCACCAGCGGGGAGGAGCACATCGATCCACGACATTGCAAGTGGGTGTGAGACCGGAGAAAATAGGGTGTTGTGTGAGAAAATGTGGAAACGAAAAAGTGCTGAACAACAGACGGACAAAAAGGGATTTGAGCCTTGATGCCTCATTCTATTCGAAAACCAACATTAAAGACTCACCTTTGTTTGACACTTTCAAACATAATACATAAGTATTAGTTTATTGATCAACTTCAAATGCCTAATTGTTGTAATGTTTGAAATGAGGCTGTTTCTTTCTCAAAGATATCACTTCTTTTTGTTTAAGAATTTCTTAAAGGTTGTCTTCTAGGCAAAGTTGAGCGCACGGATGTTGAGACTTTGCAACAAAAGTTTAAAAAGATGATAAATTTTGAGTTGTGAATTAAAATTATTCAATTGTTTAACATATTTAGTCAATCTACTTATAAAGATTGAATGAAATGTTAGGGTACTCTCATATTTAAGTAATGT

mRNA sequence

TGTTTGACGTAAATAAGCAGACACGAGAGATACAAACCCTCGTAGCTTAGAGGGCGGCATCATATTTGTGCATTGTTAGTTTTGGGCCAACGTCTTTGAGAACGTACCAAGAACTACAAATCTGCGGCGAAAAGAGAGTTAGGGTTTAACTTAAGTTGTTGGGTCACGCAATTGAGGACGGCAGCTTCAGCCTTCAACCATTCCGATTAGGACTACTCCCCAAATTTCTCGTTGAACATGGCTTTCAAGACCAACACCGTTTCTTCCGCTACTTCTGCTGTTGCAATTTCTTCCGAAGCTAAGCTCTTTTCCTCTCTATTTACTCACTCTCCTCCCGTTCCATCATCAAATCCCCAAATTTCCTCTGCAAATAATTCTAAGTCCCTACATGCATCACCGGAGCGCAATTCCTTTCAACACGGGATTCCAATGTTCCTACACAAGTGCAAGACAGGTCTCGCGGCCATGGCGGGGATTATGAGGAGAGGTTACATTCCTGATGAAGTGACATTTACTACCTTGATTAAGGGCTTGTGTGTGCAGCATAGGATTATTGAAGCTACTAAGCTATTTATGAGAATGCAAAAGTTAGGTTGCACACCTAATGTGGTTACTTATGGAACTTTGATCAAGGGCCTATGTGCTATAGGGAATATTAACCTCGCACTTAAGTGGCATCAAGAAATGCTCAATGACACTAGTCCATATGTATTTAATTGTAGGCCTAATGTTATTTCCTACAGTATCATCATAGATGGGCTTTGTAAGGTTGGAAATTGGGAGGAGGCTATATGTTTATTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGTTGTCACATTTAGTGTGTTGATTGATATGCTTTGCAAGGAAGGACAGGTTATCGAAGCTAAGAAGTTGCTAGAGATGATGATTCAGATTGGTATTGTTCCTAATTTGTTTACTTACACTTCATTGATTAAGGGGTTTTGTTTGGCTGGTGACTTGAATAGTGCCAAGGAGTTGTTTGTTAGTATGCCAAGTAAGGGATATGAAGCTGATGTGATTAGTTACAATATGTTAATCAATGGGTATTGTAAAAACTTGAAAGTGGAAGAAGCAATGAAGCTTTACAGTGAAATGCTTCATGTGGGAATGTGGCCAGATATGAAAACATCTGGTGTCTTGTTAAAAGCGCTTTTTCTTGCCGGCAAGGTTAATGATGCAAAGGAACTATTTCGTGTCATTAAACCTTATGCTATTCCTGAAGATTTATGTATATGTTGTATTTTCTTAGATGGGTTGTGTAAGAATGGTTGTTTTTTTGAAGCGATGAAACTTTTTAATGAACTAAAATCTTACAACATGAAATTGGACATTGAAACCTTTGGTTGTCTAATTGATGGTCTGTGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTATTTGATAAACTATCCAAGGAAGGGATTCAACCGGATGCTATGGCTTATACCAGTATGATCCATGGGTTTTGTAAGGAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTTCTCCCGACTTAATTACTTATAGTATCCTTATGCGTGGTTTCTTCGAGAGTAATAAATTAGAGAAGGTGGTTCAACTCCTCCATAGGATGATTGAAAAGGATGTGTGGCCAGATGCTGGAATTTATGCTATAGTTGAAGACATGGTTTGCAAAGATGAAAAATATAAAGAATGGCTAGACTTGCTTCAAAGCTTTCTTGTCCAAAAGCATCGGAATGCCTATTTATAGACTTAGAAGCTATATGACTTGGAAATTTCTAGTCAGTTTCGAGAAAGAATGAAACACATTGGTTTCCATTTTCCATCTCTGTTATTAAACGAATATTTGAGTTATTCTTCACGAGCAGCATTCGTAGCGAGTTTGTTAAGAAATGGAGAGAGAGAGAGAGAGACTGACAGTGGAGTAATTATACTTGGGAGAATAGAAATCGCAAATCTTTTCCTAGAAAAGCTCAACCACCAGCGGGGAGGAGCACATCGATCCACGACATTGCAAGTGGGTGTGAGACCGGAGAAAATAGGGTGTTGTGTGAGAAAATGTGGAAACGAAAAAGTGCTGAACAACAGACGGACAAAAAGGGATTTGAGCCTTGATGCCTCATTCTATTCGAAAACCAACATTAAAGACTCACCTTTGTTTGACACTTTCAAACATAATACATAAGTATTAGTTTATTGATCAACTTCAAATGCCTAATTGTTGTAATGTTTGAAATGAGGCTGTTTCTTTCTCAAAGATATCACTTCTTTTTGTTTAAGAATTTCTTAAAGGTTGTCTTCTAGGCAAAGTTGAGCGCACGGATGTTGAGACTTTGCAACAAAAGTTTAAAAAGATGATAAATTTTGAGTTGTGAATTAAAATTATTCAATTGTTTAACATATTTAGTCAATCTACTTATAAAGATTGAATGAAATGTTAGGGTACTCTCATATTTAAGTAATGT

Coding sequence (CDS)

ATGGCTTTCAAGACCAACACCGTTTCTTCCGCTACTTCTGCTGTTGCAATTTCTTCCGAAGCTAAGCTCTTTTCCTCTCTATTTACTCACTCTCCTCCCGTTCCATCATCAAATCCCCAAATTTCCTCTGCAAATAATTCTAAGTCCCTACATGCATCACCGGAGCGCAATTCCTTTCAACACGGGATTCCAATGTTCCTACACAAGTGCAAGACAGGTCTCGCGGCCATGGCGGGGATTATGAGGAGAGGTTACATTCCTGATGAAGTGACATTTACTACCTTGATTAAGGGCTTGTGTGTGCAGCATAGGATTATTGAAGCTACTAAGCTATTTATGAGAATGCAAAAGTTAGGTTGCACACCTAATGTGGTTACTTATGGAACTTTGATCAAGGGCCTATGTGCTATAGGGAATATTAACCTCGCACTTAAGTGGCATCAAGAAATGCTCAATGACACTAGTCCATATGTATTTAATTGTAGGCCTAATGTTATTTCCTACAGTATCATCATAGATGGGCTTTGTAAGGTTGGAAATTGGGAGGAGGCTATATGTTTATTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGTTGTCACATTTAGTGTGTTGATTGATATGCTTTGCAAGGAAGGACAGGTTATCGAAGCTAAGAAGTTGCTAGAGATGATGATTCAGATTGGTATTGTTCCTAATTTGTTTACTTACACTTCATTGATTAAGGGGTTTTGTTTGGCTGGTGACTTGAATAGTGCCAAGGAGTTGTTTGTTAGTATGCCAAGTAAGGGATATGAAGCTGATGTGATTAGTTACAATATGTTAATCAATGGGTATTGTAAAAACTTGAAAGTGGAAGAAGCAATGAAGCTTTACAGTGAAATGCTTCATGTGGGAATGTGGCCAGATATGAAAACATCTGGTGTCTTGTTAAAAGCGCTTTTTCTTGCCGGCAAGGTTAATGATGCAAAGGAACTATTTCGTGTCATTAAACCTTATGCTATTCCTGAAGATTTATGTATATGTTGTATTTTCTTAGATGGGTTGTGTAAGAATGGTTGTTTTTTTGAAGCGATGAAACTTTTTAATGAACTAAAATCTTACAACATGAAATTGGACATTGAAACCTTTGGTTGTCTAATTGATGGTCTGTGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTATTTGATAAACTATCCAAGGAAGGGATTCAACCGGATGCTATGGCTTATACCAGTATGATCCATGGGTTTTGTAAGGAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTTCTCCCGACTTAATTACTTATAGTATCCTTATGCGTGGTTTCTTCGAGAGTAATAAATTAGAGAAGGTGGTTCAACTCCTCCATAGGATGATTGAAAAGGATGTGTGGCCAGATGCTGGAATTTATGCTATAGTTGAAGACATGGTTTGCAAAGATGAAAAATATAAAGAATGGCTAGACTTGCTTCAAAGCTTTCTTGTCCAAAAGCATCGGAATGCCTATTTATAG

Protein sequence

MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQHGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLLQSFLVQKHRNAYL

Homology

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BLAST of Cmc01g0022471 vs. NCBI nr
Match: XP_008447194.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62720-like [Cucumis melo])

HSP 1 Score: 1016.5 bits (2627), Expect = 7.9e-293
Identity = 516/588 (87.76%), Postives = 516/588 (87.76%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ
Sbjct: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60

Query: 61  HGIPMFLHKCKT------------------------------------------------ 120
           HGIPMFLHKCKT                                                
Sbjct: 61  HGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKEMHLA 120

Query: 121 ------------------------GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                   GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA
Sbjct: 121 GLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
           IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE
Sbjct: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD
Sbjct: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP
Sbjct: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 517
           DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL
Sbjct: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 540

[Close]

BLAST of Cmc01g0022471 vs. NCBI nr
Match: KAA0041973.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17909.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1012.3 bits (2616), Expect = 1.5e-291
Identity = 514/588 (87.41%), Postives = 514/588 (87.41%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ
Sbjct: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60

Query: 61  HGIPMFLHKCKT------------------------------------------------ 120
           HGIPMFLHKCKT                                                
Sbjct: 61  HGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKEMHLA 120

Query: 121 ------------------------GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                   GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA
Sbjct: 121 GLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
           IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE DVISYNMLINGYCK LKVEE
Sbjct: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD
Sbjct: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP
Sbjct: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 517
           DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL
Sbjct: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 540

[Close]

BLAST of Cmc01g0022471 vs. NCBI nr
Match: XP_031745146.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 983.0 bits (2540), Expect = 9.7e-283
Identity = 481/516 (93.22%), Postives = 499/516 (96.71%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTV+SA+SAVAISSE KL SSLFTHSP V SSNPQISSANN KSLHASPER SFQ
Sbjct: 1   MAFKTNTVASASSAVAISSEVKLLSSLFTHSPAVLSSNPQISSANNPKSLHASPERISFQ 60

Query: 61  HGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGC 120
           HGIPMFLHKCKTGLAAMAGIMRRGYIPD VTFTTLIKGLCV+HRIIEATKLFMRMQKLGC
Sbjct: 61  HGIPMFLHKCKTGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGC 120

Query: 121 TPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 180
           TPNVVTYGTLIKGLCA+GNIN+ALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN
Sbjct: 121 TPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 180

Query: 181 WEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTS 240
           WEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI+AKKLLEMMIQIGIVPNLFTYTS
Sbjct: 181 WEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTS 240

Query: 241 LIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSEMLHVG 300
           LIKGFCL GDLNSAKELFVSMPSKGYE DVISYNMLINGYCK LKVEEAMKL++EMLHVG
Sbjct: 241 LIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVG 300

Query: 301 MWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAM 360
           MWPD+KTSGVLLKALFLAGKV+DAKELFRVIKPYA+P+DLCICCIFLDGLCKNG  FEAM
Sbjct: 301 MWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAM 360

Query: 361 KLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTSMIHGF 420
           KLFNEL+SYNMKLDIETFGCLIDGLCKAGKLETAWELF+KL +EGIQPDAMAY+SMIHGF
Sbjct: 361 KLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGF 420

Query: 421 CKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKDVWPDA 480
           CK+GQVDKANILFQKMEENGCSPDLITYSILMRGF+ESNKLEKVVQLLHRMIEKDVWPD 
Sbjct: 421 CKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDD 480

Query: 481 GIYAIVEDMVCKDEKYKEWLDLLQSFLVQKHRNAYL 517
           GIYAIVEDMVCKDEKYKEWLDLLQ F VQKHRN YL
Sbjct: 481 GIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHRNGYL 516

[Close]

BLAST of Cmc01g0022471 vs. NCBI nr
Match: XP_008447178.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 798.5 bits (2061), Expect = 3.4e-227
Identity = 392/515 (76.12%), Postives = 445/515 (86.41%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTV+SA+S VAISS+AK+ SSLFTHSP +PSSNPQI SAN+ KSLHA  ER S Q
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPTIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGIPMFLHKCK---TGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQK 120
           HG+PMF+H CK     L+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EATKLFMRM K
Sbjct: 61  HGLPMFIHNCKKVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPK 120

Query: 121 LGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCK 180
           LGC PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN++SY+IIID LCK
Sbjct: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCK 180

Query: 181 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNLFT 240
           +G W+EA  LFNEMVDQGV+P+VVTFS LIDMLCKEG VIEAKK LE M+  GIVP+LFT
Sbjct: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFT 240

Query: 241 YTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSEML 300
           YTSLI+GFCL GDL+SAKELF+SMPSKGYE DVISY +LI GYCK L +EEAMKLY +ML
Sbjct: 241 YTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKML 300

Query: 301 HVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGCFF 360
           HVG WPDMKT  VLLK LFLAGKV DAK+LF VIKPYA+PE+L IC +FLDGLCKNGC F
Sbjct: 301 HVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLF 360

Query: 361 EAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTSMI 420
           EAM+LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QPD + Y  MI
Sbjct: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420

Query: 421 HGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKDVW 480
           +GFCK+GQVD ANILFQ MEENGC+P+L TY  LM GF+++NKLE+VVQLLH+MI+KDV 
Sbjct: 421 NGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVS 480

Query: 481 PDAGIYAIVEDMVCKDEKYKEWLDLLQSFLVQKHR 513
             AGIY IVEDMV KDE+Y+EWLD+LQ F VQKH+
Sbjct: 481 LAAGIYTIVEDMVSKDERYREWLDILQRFPVQKHQ 515

[Close]

BLAST of Cmc01g0022471 vs. NCBI nr
Match: XP_031744953.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 [Cucumis sativus] >KAE8646080.1 hypothetical protein Csa_015913 [Cucumis sativus])

HSP 1 Score: 792.3 bits (2045), Expect = 2.4e-225
Identity = 385/511 (75.34%), Postives = 442/511 (86.50%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           M FK N+V+SA+S VAISS+AKLFSSLFTHSP +PSSNPQISSAN+ KSLHA  ER S Q
Sbjct: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60

Query: 61  HGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGC 120
           HG+PMF+H CK GL+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EAT+LF+RMQKLGC
Sbjct: 61  HGLPMFIHNCKKGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 120

Query: 121 TPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 180
            PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN+ SY+IIID LCK+G 
Sbjct: 121 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK 180

Query: 181 WEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTS 240
           W+EA  LFNEMVDQGV+P+VVTFS LID LCKEG VIEAKK LE M+  GIVP+LFT+TS
Sbjct: 181 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 240

Query: 241 LIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSEMLHVG 300
           LI+GFCL GDL+SAKELF+SMPSKGYE DVISY +LI GYCK   VEEAMKLY+EML VG
Sbjct: 241 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 300

Query: 301 MWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAM 360
            WPDMKT  VLLK LFLAGKV DAK+LF V+KP+A+P++L IC +FLDGLCKNGC FEAM
Sbjct: 301 KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM 360

Query: 361 KLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTSMIHGF 420
           +LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QPD + Y  MI+GF
Sbjct: 361 ELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF 420

Query: 421 CKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKDVWPDA 480
           CK GQVD ANILFQ MEENGC+P+L+TYS L+ GF+++NKLE+VV+LLH+MI+KDV   A
Sbjct: 421 CKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAA 480

Query: 481 GIYAIVEDMVCKDEKYKEWLDLLQSFLVQKH 512
            IY IVEDMV KDEK +EWLD+LQ F VQKH
Sbjct: 481 SIYTIVEDMVSKDEKCREWLDILQRFPVQKH 511

[Close]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-83
Identity = 171/452 (37.83%), Postives = 258/452 (57.08%), Query Frame = 0


Query: 87  PDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKW 146
           PD VT +TLI GLC++ R+ EA  L  RM + G  P+ VTYG ++  LC  GN  LAL  
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 147 HQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ--------- 206
            ++M         N + +V+ YSI+ID LCK G++++A+ LFNEM  +G++         
Sbjct: 233 FRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 292

Query: 207 --------------------------PNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGI 266
                                     P+VVTFS LID+  KEG+++EAK+L   MI  GI
Sbjct: 293 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 352

Query: 267 VPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMK 326
            P+  TY SLI GFC    L+ A ++F  M SKG E D+++Y++LIN YCK  +V++ M+
Sbjct: 353 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 412

Query: 327 LYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLC 386
           L+ E+   G+ P+  T   L+     +GK+N AKELF+ +    +P  +    I LDGLC
Sbjct: 413 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 472

Query: 387 KNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAM 446
            NG   +A+++F +++   M L I  +  +I G+C A K++ AW LF  LS +G++PD +
Sbjct: 473 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 532

Query: 447 AYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRM 504
            Y  MI G CK+G + +A++LF+KM+E+GC+PD  TY+IL+R     + L   V+L+  M
Sbjct: 533 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 592

[Close]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.6e-83
Identity = 167/476 (35.08%), Postives = 267/476 (56.09%), Query Frame = 0


Query: 57  NSFQHGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQ 116
           N + HG      +    +A +  ++  GY PD +TFTTLI GL + ++  EA  L  RM 
Sbjct: 163 NGYCHG-----KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 222

Query: 117 KLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEM---LNDTSPYVFN------------- 176
           + GC PN+VTYG ++ GLC  G+ +LAL    +M     +    +FN             
Sbjct: 223 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 282

Query: 177 -------------CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 236
                         RPNV++YS +I  LC  G W +A  L ++M+++ + PN+VTF+ LI
Sbjct: 283 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 342

Query: 237 DMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE 296
           D   KEG+ +EA+KL + MI+  I P++FTY SL+ GFC+   L+ AK++F  M SK   
Sbjct: 343 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 402

Query: 297 ADVISYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKEL 356
            DV++YN LI G+CK+ +VE+  +L+ EM H G+  D  T   L++ LF  G  ++A+++
Sbjct: 403 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 462

Query: 357 FRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCK 416
           F+ +    +P D+    I LDGLC NG   +A+++F+ ++   +KLDI  +  +I+G+CK
Sbjct: 463 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 522

Query: 417 AGKLETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLIT 476
           AGK++  W+LF  LS +G++P+ + Y +MI G C +  + +A  L +KM+E+G  P+  T
Sbjct: 523 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 582

Query: 477 YSILMRGFFESNKLEKVVQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
           Y+ L+R            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 583 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 310.8 bits (795), Expect = 2.8e-83
Identity = 170/448 (37.95%), Postives = 265/448 (59.15%), Query Frame = 0


Query: 57  NSFQHGIPMFLH-KCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRM 116
           N+  HG  +FLH K    +A +  ++ RG  PD  T+ T++ GLC +  I  A  L  +M
Sbjct: 189 NTLIHG--LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 248

Query: 117 QKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGL 176
           +K     +VV Y T+I  LC   N+N AL    EM N         RPNV++Y+ +I  L
Sbjct: 249 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK------GIRPNVVTYNSLIRCL 308

Query: 177 CKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNL 236
           C  G W +A  L ++M+++ + PNVVTFS LID   KEG+++EA+KL + MI+  I P++
Sbjct: 309 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 368

Query: 237 FTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSE 296
           FTY+SLI GFC+   L+ AK +F  M SK    +V++YN LI G+CK  +VEE M+L+ E
Sbjct: 369 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 428

Query: 297 MLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGC 356
           M   G+  +  T   L++ LF AG  + A+++F+ +    +P D+    I LDGLCK G 
Sbjct: 429 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 488

Query: 357 FFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTS 416
             +A+ +F  L+   M+ DI T+  +I+G+CKAGK+E  W+LF  LS +G++P+ + YT+
Sbjct: 489 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 548

Query: 417 MIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKD 476
           MI GFC++G  ++A+ LF++M+E+G  P+  TY+ L+R            +L+  M    
Sbjct: 549 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 608

Query: 477 VWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
              DA   ++V +M+      K +L++L
Sbjct: 609 FVGDASTISMVINMLHDGRLEKSYLEML 628

[Close]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 310.1 bits (793), Expect = 4.8e-83
Identity = 168/476 (35.29%), Postives = 266/476 (55.88%), Query Frame = 0


Query: 57  NSFQHGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQ 116
           N + HG      +    +A +  ++  GY PD +TFTTLI GL + ++  EA  L  RM 
Sbjct: 88  NGYCHG-----KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 147

Query: 117 KLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEM---LNDTSPYVFN------------- 176
           + GC PN+VTYG ++ GLC  G+I+LA     +M     +    +FN             
Sbjct: 148 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 207

Query: 177 -------------CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 236
                         RPNV++YS +I  LC  G W +A  L ++M+++ + PN+VTF+ LI
Sbjct: 208 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 267

Query: 237 DMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE 296
           D   KEG+ +EA+KL + MI+  I P++FTY SLI GFC+   L+ AK++F  M SK   
Sbjct: 268 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 327

Query: 297 ADVISYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKEL 356
            D+ +YN LI G+CK+ +VE+  +L+ EM H G+  D  T   L++ LF  G  ++A+++
Sbjct: 328 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 387

Query: 357 FRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCK 416
           F+ +    +P D+    I LDGLC NG   +A+++F+ ++   +KLDI  +  +I+G+CK
Sbjct: 388 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 447

Query: 417 AGKLETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLIT 476
           AGK++  W+LF  LS +G++P+ + Y +MI G C +  + +A  L +KM+E+G  PD  T
Sbjct: 448 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 507

Query: 477 YSILMRGFFESNKLEKVVQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
           Y+ L+R            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 508 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558

[Close]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.4e-82
Identity = 169/459 (36.82%), Postives = 263/459 (57.30%), Query Frame = 0


Query: 74  LAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKG 133
           +A +  ++  GY PD  TFTTLI GL + ++  EA  L  +M + GC P++VTYGT++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 134 LCAIGNINLALKWHQEMLN---DTSPYVFN--------------------------CRPN 193
           LC  G+I+LAL   ++M     +    ++N                           RP+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 194 VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLE 253
           V +YS +I  LC  G W +A  L ++M+++ + PNVVTFS LID   KEG+++EA+KL +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 254 MMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNL 313
            MI+  I P++FTY+SLI GFC+   L+ AK +F  M SK    +V++Y+ LI G+CK  
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 314 KVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICC 373
           +VEE M+L+ EM   G+  +  T   L+   F A   ++A+ +F+ +    +  ++    
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 374 IFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKE 433
           I LDGLCKNG   +AM +F  L+   M+ DI T+  +I+G+CKAGK+E  WELF  LS +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532

Query: 434 GIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKV 493
           G+ P+ +AY +MI GFC++G  ++A+ L +KM+E+G  P+  TY+ L+R        E  
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592

Query: 494 VQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL
Match: A0A1S3BGA8 (pentatricopeptide repeat-containing protein At1g62720-like OS=Cucumis melo OX=3656 GN=LOC103489704 PE=4 SV=1)

HSP 1 Score: 1016.5 bits (2627), Expect = 3.8e-293
Identity = 516/588 (87.76%), Postives = 516/588 (87.76%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ
Sbjct: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60

Query: 61  HGIPMFLHKCKT------------------------------------------------ 120
           HGIPMFLHKCKT                                                
Sbjct: 61  HGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKEMHLA 120

Query: 121 ------------------------GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                   GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA
Sbjct: 121 GLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
           IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE
Sbjct: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD
Sbjct: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP
Sbjct: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 517
           DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL
Sbjct: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 540

[Close]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL
Match: A0A5A7TFJ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001980 PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 7.2e-292
Identity = 514/588 (87.41%), Postives = 514/588 (87.41%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ
Sbjct: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60

Query: 61  HGIPMFLHKCKT------------------------------------------------ 120
           HGIPMFLHKCKT                                                
Sbjct: 61  HGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKEMHLA 120

Query: 121 ------------------------GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                   GLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA
Sbjct: 121 GLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
           IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE DVISYNMLINGYCK LKVEE
Sbjct: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD
Sbjct: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP
Sbjct: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 517
           DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL
Sbjct: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 540

[Close]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL
Match: A0A1S3BHF7 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489690 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.6e-227
Identity = 392/515 (76.12%), Postives = 445/515 (86.41%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTV+SA+S VAISS+AK+ SSLFTHSP +PSSNPQI SAN+ KSLHA  ER S Q
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPTIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGIPMFLHKCK---TGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQK 120
           HG+PMF+H CK     L+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EATKLFMRM K
Sbjct: 61  HGLPMFIHNCKKVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPK 120

Query: 121 LGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCK 180
           LGC PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN++SY+IIID LCK
Sbjct: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCK 180

Query: 181 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNLFT 240
           +G W+EA  LFNEMVDQGV+P+VVTFS LIDMLCKEG VIEAKK LE M+  GIVP+LFT
Sbjct: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFT 240

Query: 241 YTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSEML 300
           YTSLI+GFCL GDL+SAKELF+SMPSKGYE DVISY +LI GYCK L +EEAMKLY +ML
Sbjct: 241 YTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKML 300

Query: 301 HVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGCFF 360
           HVG WPDMKT  VLLK LFLAGKV DAK+LF VIKPYA+PE+L IC +FLDGLCKNGC F
Sbjct: 301 HVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLF 360

Query: 361 EAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTSMI 420
           EAM+LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QPD + Y  MI
Sbjct: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420

Query: 421 HGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKDVW 480
           +GFCK+GQVD ANILFQ MEENGC+P+L TY  LM GF+++NKLE+VVQLLH+MI+KDV 
Sbjct: 421 NGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVS 480

Query: 481 PDAGIYAIVEDMVCKDEKYKEWLDLLQSFLVQKHR 513
             AGIY IVEDMV KDE+Y+EWLD+LQ F VQKH+
Sbjct: 481 LAAGIYTIVEDMVSKDERYREWLDILQRFPVQKHQ 515

[Close]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL
Match: A0A5A7TFD7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001070 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 3.3e-220
Identity = 393/584 (67.29%), Postives = 446/584 (76.37%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           MAFKTNTV+SA+S VAISS+AK+ SSLFTHSP +PSSNPQI SAN+ KSLHA  ER S Q
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPSIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGIPMFLHKCKTG----------------------------------------------- 120
           HG+PMF+H CK G                                               
Sbjct: 61  HGLPMFIHNCKKGNITATQALQFFHLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLA 120

Query: 121 -------------------------LAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                    L+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EA
Sbjct: 121 GLSPNFFTLSILINCLCNVNRVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           TKLFMRM KLGC PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN++SY
Sbjct: 181 TKLFMRMPKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           +IIID LCK+G W+EA  LFNEMVDQGV+P+VVTFS LIDMLCKEG VIEAKK LE M+ 
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMML 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
            GIVP+LFTYTSLI+GFCL GDL+SAKELF+SMPSKGYE DVISY +LI GYCK L +EE
Sbjct: 301 RGIVPDLFTYTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLY +MLHVG WPDMKT  VLLK LFLAGKV DAK+LF VIKPYA+PE+L IC +FLD
Sbjct: 361 AMKLYYKMLHVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGC FEAM+LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QP
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 513
           D + Y  MI+GFCK+GQVD ANILFQ MEENGC+P+L TY  LM GF+++NKLE+VVQLL
Sbjct: 481 DVVTYCIMINGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLL 540

[Close]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL
Match: A0A0A0K7C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230920 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 3.0e-213
Identity = 380/576 (65.97%), Postives = 437/576 (75.87%), Query Frame = 0


Query: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60
           M FK N+V+SA+S VAISS+AKLFSSLFTHSP +PSSNPQISSAN+ KSLHA  ER S Q
Sbjct: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60

Query: 61  HGIPMFLHKCK------------------------------------------------- 120
           HG+PMF+H CK                                                 
Sbjct: 61  HGLPMFIHNCKKGNITSTQALQFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLA 120

Query: 121 -----------------------TGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180
                                   GL+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EA
Sbjct: 121 GLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240
           T+LF+RMQKLGC PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN+ SY
Sbjct: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240

Query: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300
           +IIID LCK+G W+EA  LFNEMVDQGV+P+VVTFS LID LCKEG VIEAKK LE M+ 
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300

Query: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEE 360
            GIVP+LFT+TSLI+GFCL GDL+SAKELF+SMPSKGYE DVISY +LI GYCK   VEE
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360

Query: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420
           AMKLY+EML VG WPDMKT  VLLK LFLAGKV DAK+LF V+KP+A+P++L IC +FLD
Sbjct: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420

Query: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480
           GLCKNGC FEAM+LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QP
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 505
           D + Y  MI+GFCK GQVD ANILFQ MEENGC+P+L+TYS L+ GF+++NKLE+VV+LL
Sbjct: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 540

[Close]

BLAST of Cmc01g0022471 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 9.0e-85
Identity = 171/452 (37.83%), Postives = 258/452 (57.08%), Query Frame = 0


Query: 87  PDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKW 146
           PD VT +TLI GLC++ R+ EA  L  RM + G  P+ VTYG ++  LC  GN  LAL  
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 147 HQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ--------- 206
            ++M         N + +V+ YSI+ID LCK G++++A+ LFNEM  +G++         
Sbjct: 233 FRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 292

Query: 207 --------------------------PNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGI 266
                                     P+VVTFS LID+  KEG+++EAK+L   MI  GI
Sbjct: 293 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 352

Query: 267 VPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMK 326
            P+  TY SLI GFC    L+ A ++F  M SKG E D+++Y++LIN YCK  +V++ M+
Sbjct: 353 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 412

Query: 327 LYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLC 386
           L+ E+   G+ P+  T   L+     +GK+N AKELF+ +    +P  +    I LDGLC
Sbjct: 413 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 472

Query: 387 KNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAM 446
            NG   +A+++F +++   M L I  +  +I G+C A K++ AW LF  LS +G++PD +
Sbjct: 473 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 532

Query: 447 AYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRM 504
            Y  MI G CK+G + +A++LF+KM+E+GC+PD  TY+IL+R     + L   V+L+  M
Sbjct: 533 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 592

[Close]

BLAST of Cmc01g0022471 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 311.6 bits (797), Expect = 1.2e-84
Identity = 167/476 (35.08%), Postives = 267/476 (56.09%), Query Frame = 0


Query: 57  NSFQHGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQ 116
           N + HG      +    +A +  ++  GY PD +TFTTLI GL + ++  EA  L  RM 
Sbjct: 163 NGYCHG-----KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 222

Query: 117 KLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEM---LNDTSPYVFN------------- 176
           + GC PN+VTYG ++ GLC  G+ +LAL    +M     +    +FN             
Sbjct: 223 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 282

Query: 177 -------------CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 236
                         RPNV++YS +I  LC  G W +A  L ++M+++ + PN+VTF+ LI
Sbjct: 283 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 342

Query: 237 DMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE 296
           D   KEG+ +EA+KL + MI+  I P++FTY SL+ GFC+   L+ AK++F  M SK   
Sbjct: 343 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 402

Query: 297 ADVISYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKEL 356
            DV++YN LI G+CK+ +VE+  +L+ EM H G+  D  T   L++ LF  G  ++A+++
Sbjct: 403 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 462

Query: 357 FRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCK 416
           F+ +    +P D+    I LDGLC NG   +A+++F+ ++   +KLDI  +  +I+G+CK
Sbjct: 463 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 522

Query: 417 AGKLETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLIT 476
           AGK++  W+LF  LS +G++P+ + Y +MI G C +  + +A  L +KM+E+G  P+  T
Sbjct: 523 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 582

Query: 477 YSILMRGFFESNKLEKVVQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
           Y+ L+R            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 583 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Cmc01g0022471 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-84
Identity = 170/448 (37.95%), Postives = 265/448 (59.15%), Query Frame = 0


Query: 57  NSFQHGIPMFLH-KCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRM 116
           N+  HG  +FLH K    +A +  ++ RG  PD  T+ T++ GLC +  I  A  L  +M
Sbjct: 189 NTLIHG--LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 248

Query: 117 QKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGL 176
           +K     +VV Y T+I  LC   N+N AL    EM N         RPNV++Y+ +I  L
Sbjct: 249 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK------GIRPNVVTYNSLIRCL 308

Query: 177 CKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQIGIVPNL 236
           C  G W +A  L ++M+++ + PNVVTFS LID   KEG+++EA+KL + MI+  I P++
Sbjct: 309 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 368

Query: 237 FTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNLKVEEAMKLYSE 296
           FTY+SLI GFC+   L+ AK +F  M SK    +V++YN LI G+CK  +VEE M+L+ E
Sbjct: 369 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 428

Query: 297 MLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLDGLCKNGC 356
           M   G+  +  T   L++ LF AG  + A+++F+ +    +P D+    I LDGLCK G 
Sbjct: 429 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 488

Query: 357 FFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQPDAMAYTS 416
             +A+ +F  L+   M+ DI T+  +I+G+CKAGK+E  W+LF  LS +G++P+ + YT+
Sbjct: 489 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 548

Query: 417 MIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLLHRMIEKD 476
           MI GFC++G  ++A+ LF++M+E+G  P+  TY+ L+R            +L+  M    
Sbjct: 549 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 608

Query: 477 VWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
              DA   ++V +M+      K +L++L
Sbjct: 609 FVGDASTISMVINMLHDGRLEKSYLEML 628

[Close]

BLAST of Cmc01g0022471 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 310.1 bits (793), Expect = 3.4e-84
Identity = 168/476 (35.29%), Postives = 266/476 (55.88%), Query Frame = 0


Query: 57  NSFQHGIPMFLHKCKTGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQ 116
           N + HG      +    +A +  ++  GY PD +TFTTLI GL + ++  EA  L  RM 
Sbjct: 88  NGYCHG-----KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 147

Query: 117 KLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEM---LNDTSPYVFN------------- 176
           + GC PN+VTYG ++ GLC  G+I+LA     +M     +    +FN             
Sbjct: 148 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 207

Query: 177 -------------CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 236
                         RPNV++YS +I  LC  G W +A  L ++M+++ + PN+VTF+ LI
Sbjct: 208 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 267

Query: 237 DMLCKEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYE 296
           D   KEG+ +EA+KL + MI+  I P++FTY SLI GFC+   L+ AK++F  M SK   
Sbjct: 268 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 327

Query: 297 ADVISYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKEL 356
            D+ +YN LI G+CK+ +VE+  +L+ EM H G+  D  T   L++ LF  G  ++A+++
Sbjct: 328 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 387

Query: 357 FRVIKPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCK 416
           F+ +    +P D+    I LDGLC NG   +A+++F+ ++   +KLDI  +  +I+G+CK
Sbjct: 388 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 447

Query: 417 AGKLETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLIT 476
           AGK++  W+LF  LS +G++P+ + Y +MI G C +  + +A  L +KM+E+G  PD  T
Sbjct: 448 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 507

Query: 477 YSILMRGFFESNKLEKVVQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
           Y+ L+R            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 508 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558

[Close]

BLAST of Cmc01g0022471 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 308.5 bits (789), Expect = 9.9e-84
Identity = 169/459 (36.82%), Postives = 263/459 (57.30%), Query Frame = 0


Query: 74  LAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKG 133
           +A +  ++  GY PD  TFTTLI GL + ++  EA  L  +M + GC P++VTYGT++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 134 LCAIGNINLALKWHQEMLN---DTSPYVFN--------------------------CRPN 193
           LC  G+I+LAL   ++M     +    ++N                           RP+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 194 VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLE 253
           V +YS +I  LC  G W +A  L ++M+++ + PNVVTFS LID   KEG+++EA+KL +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 254 MMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVISYNMLINGYCKNL 313
            MI+  I P++FTY+SLI GFC+   L+ AK +F  M SK    +V++Y+ LI G+CK  
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 314 KVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICC 373
           +VEE M+L+ EM   G+  +  T   L+   F A   ++A+ +F+ +    +  ++    
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 374 IFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKE 433
           I LDGLCKNG   +AM +F  L+   M+ DI T+  +I+G+CKAGK+E  WELF  LS +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532

Query: 434 GIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKV 493
           G+ P+ +AY +MI GFC++G  ++A+ L +KM+E+G  P+  TY+ L+R        E  
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592

Query: 494 VQLLHRMIEKDVWPDAGIYAIVEDMVCKDEKYKEWLDLL 504
            +L+  M       DA    +V +M+      K +LD+L
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

The following BLAST results are available for this feature:

BLAST of Cmc01g0022471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447194.1	7.9e-293	87.76	PREDICTED: pentatricopeptide repeat-containing protein At1g62720-like [Cucumis m...	[more]
KAA0041973.1	1.5e-291	87.41	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17909...	[more]
XP_031745146.1	9.7e-283	93.22	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 ...	[more]
XP_008447178.1	3.4e-227	76.12	PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-...	[more]
XP_031744953.1	2.4e-225	75.34	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 ...	[more]

BLAST of Cmc01g0022471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ83	1.3e-83	37.83	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9SXD8	1.6e-83	35.08	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]
Q9LQ14	2.8e-83	37.95	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9C8T7	4.8e-83	35.29	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]
Q9LQ16	1.4e-82	36.82	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc01g0022471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGA8	3.8e-293	87.76	pentatricopeptide repeat-containing protein At1g62720-like OS=Cucumis melo OX=36...	[more]
A0A5A7TFJ3	7.2e-292	87.41	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BHF7	1.6e-227	76.12	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isofor...	[more]
A0A5A7TFD7	3.3e-220	67.29	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K7C1	3.0e-213	65.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230920 PE=4 SV=1	[more]

BLAST of Cmc01g0022471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22470.1	9.0e-85	37.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	1.2e-84	35.08	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62930.1	2.0e-84	37.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63330.1	3.4e-84	35.29	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62910.1	9.9e-84	36.82	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 22..154 e-value: 9.4E-22 score: 79.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 232..320 e-value: 2.4E-26 score: 94.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 157..231 e-value: 4.2E-24 score: 87.5 coord: 345..514 e-value: 1.8E-44 score: 154.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 230..261 e-value: 1.1E-11 score: 44.3 coord: 371..400 e-value: 1.9E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 90..124 e-value: 2.3E-7 score: 28.5 coord: 446..478 e-value: 3.1E-6 score: 25.0 coord: 342..374 e-value: 3.1E-6 score: 25.0 coord: 125..152 e-value: 1.4E-4 score: 19.8 coord: 377..410 e-value: 7.5E-10 score: 36.4 coord: 236..269 e-value: 2.7E-7 score: 28.3 coord: 166..200 e-value: 5.7E-12 score: 43.0 coord: 271..300 e-value: 3.1E-8 score: 31.3 coord: 412..444 e-value: 4.5E-10 score: 37.1 coord: 201..234 e-value: 2.8E-6 score: 25.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 345..370 e-value: 1.4E-4 score: 21.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 269..315 e-value: 3.0E-13 score: 49.7 coord: 409..455 e-value: 3.0E-16 score: 59.4 coord: 163..212 e-value: 1.1E-19 score: 70.3 coord: 87..135 e-value: 1.9E-16 score: 60.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 444..478 score: 11.005202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 409..443 score: 13.855141
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 234..268 score: 11.673842
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 88..122 score: 11.893068
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 339..373 score: 9.108898
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 269..303 score: 13.098811
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..233 score: 12.364404
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 13.942831
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 374..408 score: 13.372844
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 123..153 score: 9.45966
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..55
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 80..261 coord: 161..507
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 347..476
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 132..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0022471.1	Cmc01g0022471.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0005515	protein binding