Cmc01g0020841 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0020841
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr01: 19341835 .. 19344033 (-)
RNA-Seq Expression	Cmc01g0020841
Synteny	Cmc01g0020841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTCATTTGTTAAGAAGAAGGATGGATCGATACGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCATGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATATATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTGTGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTACATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCGGTGGGGGCAGTTACTATGTAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTTTGATGGTGGACTTTTGTTTGAGAGACGCCTCTATGTGCCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTATGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACCCTTAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAGTCAGCACACTTCGTTCCAGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCGAGATAGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTACGGGCACGAGGTTGGACTTTAGTACGACTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTATCCCCGGTTTGCTGGGGTGA

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTCATTTGTTAAGAAGAAGGATGGATCGATACGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCATGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATATATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTGTGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTTTGATGGTGGACTTTTGTTTGAGAGACGCCTCTATGTGCCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTATGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACCCTTAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAGTCAGCACACTTCGTTCCAGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCGAGATAGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTACGGGCACGAGGTTGGACTTTAGTACGACTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTATCCCCGGTTTGCTGGGGTGA

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTCATTTGTTAAGAAGAAGGATGGATCGATACGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAAACAGCGTTTCGTTCCAGATATGGGCACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCATGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGATTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATATATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTGTGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTTTGATGGTGGACTTTTGTTTGAGAGACGCCTCTATGTGCCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTATGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACCCTTAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAGTCAGCACACTTCGTTCCAGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCGAGATAGTGAGGTTGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTACGGGCACGAGGTTGGACTTTAGTACGACTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTATCCCCGGTTTGCTGGGGTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKKRGLAEAGQAVEFSLSFDGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCIPGLLG

Homology

[Close]

BLAST of Cmc01g0020841 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 644/693 (92.93%), Postives = 651/693 (93.94%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKKKDGS+RLCID RELNKVTVKNR
Sbjct: 574  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNR 633

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 634  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 693

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 694  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 753

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 754  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 813

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGL
Sbjct: 814  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGL 873

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 874  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 933

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 934  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 993

Query: 421  ----------KRGLAEAGQAVEFSLSFDGGLLFERRLYVPSDSAIKTELLSEAHSSPFSM 480
                      KRGLAE  QAVEFSLS DGGLLFERRL VPSD A+KTELLSEAHSSPFSM
Sbjct: 994  AQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFSM 1053

Query: 481  HPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGS KMYQDLK VYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 1054 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1113

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 1114 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPV 1173

Query: 601  SIVSDRDARFTSKFWKGLQTATGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRDAR TSKFWKGLQTA GTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1174 SIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1233

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC 668
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Sbjct: 1234 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC 1266

[Close]

BLAST of Cmc01g0020841 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1291.9 bits (3342), Expect = 0.0e+00
Identity = 647/726 (89.12%), Postives = 652/726 (89.81%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                       KRGLAEAGQAVEFSLS 
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGS KMY+D+K VYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA GTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
            FST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc01g0020841 vs. NCBI nr
Match: KAA0047130.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 640/698 (91.69%), Postives = 648/698 (92.84%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKK DG +RLCIDYRELNKVTVKN+
Sbjct: 438  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGLMRLCIDYRELNKVTVKNK 497

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIVMSFGLT
Sbjct: 498  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLT 557

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAP +FMDLMNRVFREFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 558  NAPTMFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFS 617

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWT+PSTVSEVRSFL LAGYYRRFVENF
Sbjct: 618  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTQPSTVSEVRSFLGLAGYYRRFVENF 677

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACE SFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGL
Sbjct: 678  SRIATPLTQLTRKGAPFVWSKACEGSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGL 737

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 738  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 797

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 798  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 857

Query: 421  ----------KRGLAEAGQAVEFSLSFDGGLLFERRLYVPSDSAIKTELLSEAHSSPFSM 480
                      KRGLAEAGQAVEFSLS DGGLLFERRL VPSDSA+KTELLS+AH+S FSM
Sbjct: 858  AQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSQAHNSSFSM 917

Query: 481  HPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGS KMYQDLK VYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 918  HPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 977

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 978  VSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1037

Query: 601  SIVSDRDARFTSKFWKGLQTATGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRD  FTSKFWKGLQTA GTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1038 SIVSDRDTHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1097

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCIPGLL 673
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC   L+
Sbjct: 1098 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSLV 1135

[Close]

BLAST of Cmc01g0020841 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1290.0 bits (3337), Expect = 0.0e+00
Identity = 646/726 (88.98%), Postives = 651/726 (89.67%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 952  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1011

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 1012 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1071

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 1072 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1131

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 1132 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1191

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGL
Sbjct: 1192 SRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFVIYSDASKKGL 1251

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1252 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1311

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRK                
Sbjct: 1312 KYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVSHSAALITRQAPLHR 1371

Query: 421  -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                       KRGLAEAGQAVEFSLS 
Sbjct: 1372 DLERAEIAVSVGAVTTQLAQLTVQSTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSS 1431

Query: 481  DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
            DGGLLFERRL VPSDSA+KTELLSEAHSSPFSMHPGS KMYQDLK VYWWRNMKREVAEF
Sbjct: 1432 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1491

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWEN+SMDFITGLPRTLRGF VIWVVVDRLT
Sbjct: 1492 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENMSMDFITGLPRTLRGFIVIWVVVDRLT 1551

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQTA GTRLD
Sbjct: 1552 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTAMGTRLD 1611

Query: 661  FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
            FST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFE
Sbjct: 1612 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFE 1671

[Close]

BLAST of Cmc01g0020841 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 646/726 (88.98%), Postives = 650/726 (89.53%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 149 MAPAELKELKVQLQKLLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 208

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 209 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 268

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 269 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 328

Query: 181 KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
           KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 329 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 388

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 389 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 448

Query: 301 GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 449 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 508

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 509 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 568

Query: 421 -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                      KR LAEAGQAVEFSLS 
Sbjct: 569 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRSLAEAGQAVEFSLSS 628

Query: 481 DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
           DGGLLFER L VPSDSA KTELLSEAHSSPFSMHPGS KMYQDLK VYWWRNMKREVAEF
Sbjct: 629 DGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 688

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 689 VSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 748

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
           KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTA GTRLD
Sbjct: 749 KSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDARFTSKFWKGLQTAMGTRLD 808

Query: 661 FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
           FST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFE
Sbjct: 809 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFE 868

[Close]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 240/717 (33.47%), Postives = 385/717 (53.70%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEF    V F+G+ +S+ G +     I+ V  W +P    E+R FL    Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V   S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  ---------------------KKRGLAE-------------AGQAVEFSLSFDGGLLFER 480
                                 K + + E               + VE ++    GLL   
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  R--LYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLV 540
            +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ +++++ E+V  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 600
            CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 601  PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFH 660
            P   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 661  PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 665
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 240/717 (33.47%), Postives = 385/717 (53.70%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEF    V F+G+ +S+ G +     I+ V  W +P    E+R FL    Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V   S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  ---------------------KKRGLAE-------------AGQAVEFSLSFDGGLLFER 480
                                 K + + E               + VE ++    GLL   
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  R--LYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLV 540
            +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ +++++ E+V  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 600
            CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 601  PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFH 660
            P   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 661  PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 665
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 240/717 (33.47%), Postives = 385/717 (53.70%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEF    V F+G+ +S+ G +     I+ V  W +P    E+R FL    Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V   S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  ---------------------KKRGLAE-------------AGQAVEFSLSFDGGLLFER 480
                                 K + + E               + VE ++    GLL   
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  R--LYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLV 540
            +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ +++++ E+V  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 600
            CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 601  PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFH 660
            P   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 661  PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 665
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 240/717 (33.47%), Postives = 385/717 (53.70%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEF    V F+G+ +S+ G +     I+ V  W +P    E+R FL    Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V   S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  ---------------------KKRGLAE-------------AGQAVEFSLSFDGGLLFER 480
                                 K + + E               + VE ++    GLL   
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  R--LYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLV 540
            +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ +++++ E+V  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 600
            CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 601  PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFH 660
            P   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 661  PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 665
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.6e-121
Identity = 240/717 (33.47%), Postives = 385/717 (53.70%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEF    V F+G+ +S+ G +     I+ V  W +P    E+R FL    Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V   S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  ---------------------KKRGLAE-------------AGQAVEFSLSFDGGLLFER 480
                                 K + + E               + VE ++    GLL   
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  R--LYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLV 540
            +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ +++++ E+V  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV 600
            CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 601  PGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLDFSTTFH 660
            P   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 661  PQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 665
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 644/693 (92.93%), Postives = 651/693 (93.94%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKKKDGS+RLCID RELNKVTVKNR
Sbjct: 574  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNR 633

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 634  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 693

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 694  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 753

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 754  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 813

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGL
Sbjct: 814  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGL 873

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 874  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 933

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 934  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 993

Query: 421  ----------KRGLAEAGQAVEFSLSFDGGLLFERRLYVPSDSAIKTELLSEAHSSPFSM 480
                      KRGLAE  QAVEFSLS DGGLLFERRL VPSD A+KTELLSEAHSSPFSM
Sbjct: 994  AQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFSM 1053

Query: 481  HPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGS KMYQDLK VYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 1054 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1113

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 1114 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPV 1173

Query: 601  SIVSDRDARFTSKFWKGLQTATGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRDAR TSKFWKGLQTA GTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1174 SIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1233

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC 668
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC
Sbjct: 1234 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC 1266

[Close]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1291.9 bits (3342), Expect = 0.0e+00
Identity = 647/726 (89.12%), Postives = 652/726 (89.81%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                       KRGLAEAGQAVEFSLS 
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGS KMY+D+K VYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA GTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
            FST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL
Match: A0A5A7TVD9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G001180 PE=4 SV=1)

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 640/698 (91.69%), Postives = 648/698 (92.84%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPV FVKK DG +RLCIDYRELNKVTVKN+
Sbjct: 438  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGLMRLCIDYRELNKVTVKNK 497

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIVMSFGLT
Sbjct: 498  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLT 557

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAP +FMDLMNRVFREFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 558  NAPTMFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFS 617

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWT+PSTVSEVRSFL LAGYYRRFVENF
Sbjct: 618  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTQPSTVSEVRSFLGLAGYYRRFVENF 677

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACE SFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGL
Sbjct: 678  SRIATPLTQLTRKGAPFVWSKACEGSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGL 737

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 738  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 797

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 798  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 857

Query: 421  ----------KRGLAEAGQAVEFSLSFDGGLLFERRLYVPSDSAIKTELLSEAHSSPFSM 480
                      KRGLAEAGQAVEFSLS DGGLLFERRL VPSDSA+KTELLS+AH+S FSM
Sbjct: 858  AQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSQAHNSSFSM 917

Query: 481  HPGSMKMYQDLKWVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGS KMYQDLK VYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 918  HPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 977

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 978  VSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1037

Query: 601  SIVSDRDARFTSKFWKGLQTATGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRD  FTSKFWKGLQTA GTRLDFST FHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1038 SIVSDRDTHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1097

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCIPGLL 673
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKC   L+
Sbjct: 1098 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSLV 1135

[Close]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 1290.0 bits (3337), Expect = 0.0e+00
Identity = 646/726 (88.98%), Postives = 651/726 (89.67%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 952  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1011

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 1012 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1071

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 1072 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1131

Query: 181  KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
            KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 1132 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1191

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDASKKGL
Sbjct: 1192 SRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTVPDGSGSFVIYSDASKKGL 1251

Query: 301  GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1252 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1311

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRK                
Sbjct: 1312 KYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVSHSAALITRQAPLHR 1371

Query: 421  -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                       KRGLAEAGQAVEFSLS 
Sbjct: 1372 DLERAEIAVSVGAVTTQLAQLTVQSTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSLSS 1431

Query: 481  DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
            DGGLLFERRL VPSDSA+KTELLSEAHSSPFSMHPGS KMYQDLK VYWWRNMKREVAEF
Sbjct: 1432 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1491

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWEN+SMDFITGLPRTLRGF VIWVVVDRLT
Sbjct: 1492 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENMSMDFITGLPRTLRGFIVIWVVVDRLT 1551

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIV DRDARFTSKFWKGLQTA GTRLD
Sbjct: 1552 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVFDRDARFTSKFWKGLQTAMGTRLD 1611

Query: 661  FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
            FST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFE
Sbjct: 1612 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFE 1671

[Close]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 646/726 (88.98%), Postives = 650/726 (89.53%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVSFVKKKDGSIRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPV FVKKKDGS+RLCIDYRELNKVTVKNR
Sbjct: 149 MAPAELKELKVQLQKLLDKGFIRSSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 208

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 209 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 268

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 269 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 328

Query: 181 KCEFWLKHVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLDLAGYYRRFVENF 240
           KCEFWLK VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL LAGYYRRFVENF
Sbjct: 329 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 388

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 389 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 448

Query: 301 GCVLMQQGKVVACASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVA ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 449 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 508

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 509 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 568

Query: 421 -------------------------------------------KRGLAEAGQAVEFSLSF 480
                                                      KR LAEAGQAVEFSLS 
Sbjct: 569 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRSLAEAGQAVEFSLSS 628

Query: 481 DGGLLFERRLYVPSDSAIKTELLSEAHSSPFSMHPGSMKMYQDLKWVYWWRNMKREVAEF 540
           DGGLLFER L VPSDSA KTELLSEAHSSPFSMHPGS KMYQDLK VYWWRNMKREVAEF
Sbjct: 629 DGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 688

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 689 VSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 748

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTATGTRLD 660
           KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTA GTRLD
Sbjct: 749 KSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDARFTSKFWKGLQTAMGTRLD 808

Query: 661 FSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 668
           FST FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFE
Sbjct: 809 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFE 868

[Close]

BLAST of Cmc01g0020841 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 7.2e-26
Identity = 57/131 (43.51%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 162 HLRIVLQTLRDNKLYAKFSKCEFWLKHVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 221
           HL +VLQ    ++ YA   KC F    +++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLDLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 281
            +E+R FL L GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSGSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc01g0020841 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053234.1	0.0e+00	92.93	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	89.12	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047130.1	0.0e+00	91.69	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0031931.1	0.0e+00	88.98	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026271.1	0.0e+00	88.98	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0020841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	2.6e-121	33.47	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.6e-121	33.47	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.6e-121	33.47	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.6e-121	33.47	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	2.6e-121	33.47	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0020841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDB1	0.0e+00	92.93	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]
A0A5A7U330	0.0e+00	89.12	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7TVD9	0.0e+00	91.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]
A0A5A7SQU8	0.0e+00	88.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SPZ2	0.0e+00	88.98	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]

BLAST of Cmc01g0020841 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.2e-26	43.51	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 437..493 e-value: 1.5E-15 score: 57.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 2.8E-28 score: 99.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.110008
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 502..670 e-value: 6.5E-44 score: 151.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 2.3E-86 score: 290.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 1.2E-29 score: 104.2
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 1.3E-33 score: 115.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.3E-86 score: 290.5
None	No IPR available	GENE3D	1.10.340.70		coord: 409..492 e-value: 8.1E-16 score: 60.0
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 14..404 coord: 460..666
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.52081E-95 score: 290.266
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..404 e-value: 7.95456E-58 score: 189.241
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 504..667 score: 18.790607
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 505..661

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0020841.1	Cmc01g0020841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding