Cmc01g0020661 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTTGATGTGGATGACGCCGGTCCTCAGTCGAAGCTCGAAAGCAAAGGGATCCGAATTTGGTCCTGCACAGAGCGTACGACGATAATTTTTCACAGAGAGAAAGAGAAGAGAGAGAGTTTTGATTCTGAATCAATCAACCCCATCTCCCTCTTTCTTTCTCTCTTCATTTCCGTCTTCATCCTTTCAAGAATTTGTTTCTAAATCCTTCAAATCCACCCAAGTTCCGGTCCGATCCCATCCTCCCCCCCTTTTTTATGCTTCATTCATTGATCCAAAATTATTGATTTTTGTTTGATGAATCTTATCTTGATTACCCACTTGCATCTTTTATGTGTTAAACTCCGTTTTCACGGGATCCTTATTGCTTGGGTTCTTATTTTTATTATTATTTCCATCTTTTTATACATTTTCATGCTTCTTTTGATCCAACCAGTTAATTATTGATTGAATGATTATGTAACATATAAACTATGTATTGGGGAACAGATGTGGTTGGGGAATGTGAGGAGATTTCTCTAGAGAAGTTTGGGGTCTCATTGGATTTTATTTTATTAGAGCAATTGTTGGTGATATGGTGTAATATTCACGTTTTTTTATTTCAAATTTAATTTATTGTGTTTGCAATGGTAACAGGAGATGCATTTTCATTAACCTGCTGTGTTATAAATTGATTGTTTTGCCTGGTATAGTTGAGCTTAATTTTGTTAAGTCTTTACTGTTTTTGGTACTCAAGTTTACTGATTTTTGAACTTGTAATAAAAGGAGGGAAGTAAACGTTTTTATCATCTTTAGTGGTGTAGTTTGATTGGGATTAGTCATTAGTTCCTCCAAAAGTTTTTTTTTGCAATGTTTGAACGTGGACTGTTGCTAATTTGATATCTTATTTCTACAGCACTCTGTAGGAACGATGATTAAGCTTTTTAAAGTAAAGGAAAAGCAGAGAGAGATTGCAGCTAATGCCAATGGAGTACCTCCTGTCAAGAAGCAAACTGCTGGAGAATTGCGTCTTCAAAAAGGTAGTTACTTATTTTCATCTTTGATGAAGAACTGTTGACCTTGAAGCCAACCGTGAAGCATCGAGTTTTGTCATTCTATGGTTTGTTGATTGTTGATGGGTAGTCATTCTTTTTATAGAGCTGTTTATGAGAACCTATTTGGTTTGTTCTTTTCATTAGTATTGTAGTATCCATTGTACTCACTAATGTTCAGATCAGGTTCGTGTTATTAATTGTTTTTTTTTCAAACATGATATTGCATGGCCACGAGGACATAGATCATCTTTTGGTCCTGTGCCGGTCTCTCTTTTTCCTGGAACTTTATTGCTAAATCACTTTTAGTCTAGAATTAGCTTCTATCAGCCGAATGAGCTGAGAATATTACCAAGGTAGGGCGGTTACCTTGTGACATGATACAGTCAAAGTTTTGGACTCTTACTAGCTTCCACTTGGTGTAAACTCTGGAACTTTCTGTAATTGTTTTAGTTCAGTGGTTTATGTATTGAGGCCAACTGGAATAGTTTTTATAATCTGTGGCCTTGAACGCAAGTTAGCTTTCATCTTCTTGTGTTTTCTTTTCTTTGCTGAGTGATGTTTCTTATTCCAATTTGCGGTTGTGTATCATAAATATAATATAGACATTAGTTCATTTTCCTATTACTATGGTGTTATACAAGTACTTGTGTTATTTTGATATAATAGCAACTTTAAGTTTTTTTTTTTGTTATGTCATGTTTTGTTTTATTTGGTCTTCTTGTTGTACTTGGAGTTCAAGGAGTTTTTACTTTTAATTGTAGATATCAGTGAATTGAACCTACCAAAAACGTGTAGTATATCATTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCATCCTGACGAAGGATATTATCTGTAAGTAGTCTCTAGTAGATATTGTTTTTCAGTTTAGTTCTAAAATATGTGCTTCTCAAGTGGAAATGCATGTGCAAGACATAACAATTCCTGAATCTCAAACATGCATGATGCATCTTATTATTCATTTGAAAAACACTGGGAGCAGAAGATATATGCATGGATGCCATATCATTTCTATCAATGAGGCCTCAATGGAACTTTGGATTGGACTTAATTCAACTGTCTATAAGCTGTGTATTTGAGCACTGCTTTTTTCATGATGTAATCATCATTTATTGGTAAAAATGTTTGTTCATCCCAGCTGTTCCTAGGTAATGAACTTATAAATCCTTCATTTTCTTGTTAACAGAGGTGGTACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACCAAGGTAACGATGCTGACCTTGTCAGCTAATTTGTTTGTTGGATATAGCTTAACACATTTGGCTTGCAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATATGGATTGTTTCATCTTTTCACGGTATTTAATGATTGTACCATTGTCTAGCTTTACTACTTCAAACATTTGCTCATACTCGAATGACTCGATTGGAATATTTCAAATAAAATATTTCAAATAAAATATTTCAAATTTCAAATACCTTTAACACAATGGAATATTTGCATAAATTCTAAAGAGTTGAAACCTCAAAGTTACTAGTTTGTAGGGTTTTCTTAATTACAATTTATATTTTCCATTCTTGCAGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCGGCTGTTTTAAGAGATAACCCGAAGATGTTCGAATTCAACGTGAGAAGAGCCATGGCTGGGGGTTATGTGGGACAAACTTACTTCACACGTTGCATGTAAGATTCTACATGAATTGTAAAGCAACATATACATTATTTGAAGCATGGGCTCTGCAAGGTCGTTGAACTTCTCTGGTAAGTTAATGTCTAATGTGTTGAGGACTGTCTGATCACCGATGCAACACAAAGTCCTTTGTGATGGAGGTAGAACTTTGTTGTGTGTTTGAAGTATTGGTTTCAAATGGACGTTGGGACTGGTAACTGAAACTCTTATCTGTGTATGTATTTTCCTCTAATCTATCTTGAAAAGACAGGTCGCTCTTTTGCTATCAGTTGAAAGTACAAGGTATGTTTTTTGAGCCTCCCTTCTTTTCTTTTATCAGAGTCTACTACCTACTATGGGTGTAAATTTACTGAATTGTTGAATCACAATGATTTATTTCCTTATATATATTTCAACTTTGTAAAAATCTCTGTTAGTTTCACATTTTGTCATCATCACAAGATTGGAAAGTTCAATCATTTCCTTCTTTACGTGCTCAGACCCTTT TTTCTTTGATGTGGATGACGCCGGTCCTCAGTCGAAGCTCGAAAGCAAAGGGATCCGAATTTGGTCCTGCACAGAGCGTACGACGATAATTTTTCACAGAGAGAAAGAGAAGAGAGAGAGTTTTGATTCTGAATCAATCAACCCCATCTCCCTCTTTCTTTCTCTCTTCATTTCCGTCTTCATCCTTTCAAGAATTTGTTTCTAAATCCTTCAAATCCACCCAAGTTCCGCACTCTGTAGGAACGATGATTAAGCTTTTTAAAGTAAAGGAAAAGCAGAGAGAGATTGCAGCTAATGCCAATGGAGTACCTCCTGTCAAGAAGCAAACTGCTGGAGAATTGCGTCTTCAAAAAGATATCAGTGAATTGAACCTACCAAAAACGTGTAGTATATCATTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCATCCTGACGAAGGATATTATCTAGGTGGTACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACCAAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATATGGATTGTTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCGGCTGTTTTAAGAGATAACCCGAAGATGTTCGAATTCAACGTGAGAAGAGCCATGGCTGGGGGTTATGTGGGACAAACTTACTTCACACGTTGCATGTAAGATTCTACATGAATTGTAAAGCAACATATACATTATTTGAAGCATGGGCTCTGCAAGGTCGTTGAACTTCTCTGGTAAGTTAATGTCTAATGTGTTGAGGACTGTCTGATCACCGATGCAACACAAAGTCCTTTGTGATGGAGGTAGAACTTTGTTGTGTGTTTGAAGTATTGGTTTCAAATGGACGTTGGGACTGGTAACTGAAACTCTTATCTGTGTATGTATTTTCCTCTAATCTATCTTGAAAAGACAGGTCGCTCTTTTGCTATCAGTTGAAAGTACAAGGTATGTTTTTTGAGCCTCCCTTCTTTTCTTTTATCAGAGTCTACTACCTACTATGGGTGTAAATTTACTGAATTGTTGAATCACAATGATTTATTTCCTTATATATATTTCAACTTTGTAAAAATCTCTGTTAGTTTCACATTTTGTCATCATCACAAGATTGGAAAGTTCAATCATTTCCTTCTTTACGTGCTCAGACCCTTT ATGATTAAGCTTTTTAAAGTAAAGGAAAAGCAGAGAGAGATTGCAGCTAATGCCAATGGAGTACCTCCTGTCAAGAAGCAAACTGCTGGAGAATTGCGTCTTCAAAAAGATATCAGTGAATTGAACCTACCAAAAACGTGTAGTATATCATTTCCTAATGGCAAGGATGACTTGATGAACTTTGAGGTCACTATTCATCCTGACGAAGGATATTATCTAGGTGGTACGTTTCTCTTCTCTTTCCAAGTTTCCCCTGTCTACCCTCACGAGCCACCAAAAGTGAAGTGCAAGACCAAGGTGTATCATCCTAATATTGACTTGGAAGGAAATGTTTGTCTCAATATTTTAAGAGAGGACTGGAAGCCCGTTCTGAATATCAACACTATAATATATGGATTGTTTCATCTTTTCACGCAACCAAATCATGAAGACCCCCTCAACCACGATGCTGCGGCTGTTTTAAGAGATAACCCGAAGATGTTCGAATTCAACGTGAGAAGAGCCATGGCTGGGGGTTATGTGGGACAAACTTACTTCACACGTTGCATGTAA MIKLFKVKEKQREIAANANGVPPVKKQTAGELRLQKDISELNLPKTCSISFPNGKDDLMNFEVTIHPDEGYYLGGTFLFSFQVSPVYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNHEDPLNHDAAAVLRDNPKMFEFNVRRAMAGGYVGQTYFTRCM Homology
BLAST of Cmc01g0020661 vs. NCBI nr
Match: KAA0036519.1 (NEDD8-conjugating enzyme Ubc12-like [Cucumis melo var. makuwa] >TYK13462.1 NEDD8-conjugating enzyme Ubc12-like [Cucumis melo var. makuwa]) HSP 1 Score: 388.3 bits (996), Expect = 3.8e-104 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. NCBI nr
Match: XP_008447054.1 (PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Cucumis melo]) HSP 1 Score: 388.3 bits (996), Expect = 3.8e-104 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. NCBI nr
Match: XP_004148299.1 (NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucumis sativus] >XP_011659067.1 NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucumis sativus] >XP_031744190.1 NEDD8-conjugating enzyme Ubc12 isoform X2 [Cucumis sativus] >KGN44318.1 hypothetical protein Csa_016775 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 2.4e-103 Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. NCBI nr
Match: XP_031744189.1 (NEDD8-conjugating enzyme Ubc12 isoform X1 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 2.4e-103 Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. NCBI nr
Match: XP_038888942.1 (NEDD8-conjugating enzyme Ubc12-like [Benincasa hispida] >XP_038888944.1 NEDD8-conjugating enzyme Ubc12-like [Benincasa hispida]) HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy Swiss-Prot
Match: Q9SDY5 (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 3.9e-88 Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy Swiss-Prot
Match: Q9ZU75 (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=RCE2 PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 4.8e-86 Identity = 152/185 (82.16%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy Swiss-Prot
Match: Q6DCZ9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 7.9e-65 Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy Swiss-Prot
Match: Q6P8D9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 7.9e-65 Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy Swiss-Prot
Match: A3KN22 (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64 Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy TrEMBL
Match: A0A5D3CPZ9 (NEDD8-conjugating enzyme Ubc12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold179G00220 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy TrEMBL
Match: A0A1S3BHD5 (NEDD8-conjugating enzyme Ubc12-like OS=Cucumis melo OX=3656 GN=LOC103489610 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy TrEMBL
Match: A0A0A0K481 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G253730 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103 Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy TrEMBL
Match: A0A6J1C2V1 (NEDD8-conjugating enzyme Ubc12-like OS=Momordica charantia OX=3673 GN=LOC111007951 PE=3 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 5.5e-101 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cmc01g0020661 vs. ExPASy TrEMBL
Match: A0A6J1JMG9 (NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita maxima OX=3661 GN=LOC111486523 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.5e-100 Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of Cmc01g0020661 vs. TAIR 10
Match: AT4G36800.1 (RUB1 conjugating enzyme 1 ) HSP 1 Score: 325.5 bits (833), Expect = 2.8e-89 Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Cmc01g0020661 vs. TAIR 10
Match: AT4G36800.2 (RUB1 conjugating enzyme 1 ) HSP 1 Score: 325.5 bits (833), Expect = 2.8e-89 Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Cmc01g0020661 vs. TAIR 10
Match: AT2G18600.1 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 318.5 bits (815), Expect = 3.4e-87 Identity = 152/185 (82.16%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Cmc01g0020661 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 107.8 bits (268), Expect = 9.1e-24 Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 0
BLAST of Cmc01g0020661 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 107.8 bits (268), Expect = 9.1e-24 Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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