Cmc01g0019811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0019811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr01: 17748756 .. 17750358 (+)
RNA-Seq Expression	Cmc01g0019811
Synteny	Cmc01g0019811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTAGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTAGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTATTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATAAGTAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCAGGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGTAGTGTTAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCAGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTAGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTAAGGCTCACAGTTCCCAATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACCGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

mRNA sequence

ATGTCTTTTAGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTAGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGGTTATTATCGACGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGTAGTGTTAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCAGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTAGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTAAGGCTCACAGTTCCCAATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACCGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Coding sequence (CDS)

ATGTCTTTTAGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTAGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGGTTATTATCGACGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGTAGTGTTAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCAGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTAGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTAAGGCTCACAGTTCCCAATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACCGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAACTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Protein sequence

MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGPPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Homology

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BLAST of Cmc01g0019811 vs. NCBI nr
Match: KAA0035938.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 715.3 bits (1845), Expect = 2.9e-202
Identity = 378/480 (78.75%), Postives = 386/480 (80.42%), Query Frame = 0


Query: 1   MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
           MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 54  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 113

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAG   
Sbjct: 114 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTCWTRPSTVSEVRSFLGLAGYYR 173

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 174 RFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 233

Query: 181 ---------------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH 240
                            + KELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH
Sbjct: 234 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH 293

Query: 241 SAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGL 300
           SAALITRQAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGL
Sbjct: 294 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL 353

Query: 301 AEAGQAVEFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRV 360
           AEAGQ  EFS+SSDG LLFE RLCVPSDSA+KTELL++AHSS FSMHPGSTKMYQDLKRV
Sbjct: 354 AEAGQTAEFSLSSDGGLLFESRLCVPSDSAIKTELLTEAHSSPFSMHPGSTKMYQDLKRV 413

Query: 361 YWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGPPRTLR 403
           YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITG PRTLR
Sbjct: 414 YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 473

[Close]

BLAST of Cmc01g0019811 vs. NCBI nr
Match: KAA0037817.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 705.3 bits (1819), Expect = 3.0e-199
Identity = 379/508 (74.61%), Postives = 386/508 (75.98%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 556  MSFCLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 615

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 616  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 675

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 676  RKACEDSFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 735

Query: 181  -------------------------------------------LLSTKELNMRQRRWLEL 240
                                                         + KELNMRQRRWLEL
Sbjct: 736  SHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLEL 795

Query: 241  VKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIVVLVGAVTIQLA 300
            VKDYDCEILYHPGKANVV DALSRKVSHSAALITRQA LHRDLERAEI V VGAVT+QLA
Sbjct: 796  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLA 855

Query: 301  QLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGRLLFERRLCVPSDSAVK 360
            QLT+Q TLRQR IDAQ NDPYLVEKRGLAEAGQAVEFS+SSDG LLFERRLCVPSDSAVK
Sbjct: 856  QLTIQPTLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVK 915

Query: 361  TELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG 403
            TELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG
Sbjct: 916  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG 975

[Close]

BLAST of Cmc01g0019811 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 700.7 bits (1807), Expect = 7.5e-198
Identity = 381/533 (71.48%), Postives = 388/533 (72.80%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDS VKTELLS+AHSS FSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

[Close]

BLAST of Cmc01g0019811 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 700.7 bits (1807), Expect = 7.5e-198
Identity = 381/533 (71.48%), Postives = 387/533 (72.61%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

[Close]

BLAST of Cmc01g0019811 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 700.3 bits (1806), Expect = 9.8e-198
Identity = 381/533 (71.48%), Postives = 387/533 (72.61%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHE HLR+VLQTLRDNK
Sbjct: 770  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNK 829

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 830  LYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 889

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 890  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 949

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 950  TSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1009

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 1010 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1069

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1070 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1129

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1130 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1189

[Close]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-38
Identity = 130/543 (23.94%), Postives = 219/543 (40.33%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M + ++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLL- 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG    L 
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --------------------------------------STKEL----------------- 240
                                                  S KE+                 
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  ------------------------NMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKV 300
                                    N R  RW   ++D++ EI Y PG AN + DALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSIS-SDGRLLFER-RLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQD 402
             L    + VE +I   DG L+  + ++ +P+D+ +   ++ K H     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

[Close]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-38
Identity = 130/543 (23.94%), Postives = 219/543 (40.33%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M + ++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLL- 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG    L 
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --------------------------------------STKEL----------------- 240
                                                  S KE+                 
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  ------------------------NMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKV 300
                                    N R  RW   ++D++ EI Y PG AN + DALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSIS-SDGRLLFER-RLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQD 402
             L    + VE +I   DG L+  + ++ +P+D+ +   ++ K H     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

[Close]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-38
Identity = 130/543 (23.94%), Postives = 219/543 (40.33%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M + ++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLL- 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG    L 
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --------------------------------------STKEL----------------- 240
                                                  S KE+                 
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  ------------------------NMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKV 300
                                    N R  RW   ++D++ EI Y PG AN + DALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSIS-SDGRLLFER-RLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQD 402
             L    + VE +I   DG L+  + ++ +P+D+ +   ++ K H     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

[Close]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-38
Identity = 130/543 (23.94%), Postives = 219/543 (40.33%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M + ++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLL- 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG    L 
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --------------------------------------STKEL----------------- 240
                                                  S KE+                 
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  ------------------------NMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKV 300
                                    N R  RW   ++D++ EI Y PG AN + DALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSIS-SDGRLLFER-RLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQD 402
             L    + VE +I   DG L+  + ++ +P+D+ +   ++ K H     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

[Close]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.2e-38
Identity = 130/543 (23.94%), Postives = 219/543 (40.33%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M + ++ A A F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGLL- 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG    L 
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --------------------------------------STKEL----------------- 240
                                                  S KE+                 
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  ------------------------NMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKV 300
                                    N R  RW   ++D++ EI Y PG AN + DALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSIS-SDGRLLFER-RLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQD 402
             L    + VE +I   DG L+  + ++ +P+D+ +   ++ K H     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

[Close]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL
Match: A0A5A7SZD6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE=4 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.4e-202
Identity = 378/480 (78.75%), Postives = 386/480 (80.42%), Query Frame = 0


Query: 1   MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
           MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 54  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 113

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAG   
Sbjct: 114 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTCWTRPSTVSEVRSFLGLAGYYR 173

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 174 RFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 233

Query: 181 ---------------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH 240
                            + KELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH
Sbjct: 234 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSH 293

Query: 241 SAALITRQAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGL 300
           SAALITRQAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGL
Sbjct: 294 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGL 353

Query: 301 AEAGQAVEFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRV 360
           AEAGQ  EFS+SSDG LLFE RLCVPSDSA+KTELL++AHSS FSMHPGSTKMYQDLKRV
Sbjct: 354 AEAGQTAEFSLSSDGGLLFESRLCVPSDSAIKTELLTEAHSSPFSMHPGSTKMYQDLKRV 413

Query: 361 YWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGPPRTLR 403
           YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITG PRTLR
Sbjct: 414 YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 473

[Close]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL
Match: A0A5A7T8B6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4066G00070 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.5e-199
Identity = 379/508 (74.61%), Postives = 386/508 (75.98%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 556  MSFCLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 615

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 616  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 675

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 676  RKACEDSFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK 735

Query: 181  -------------------------------------------LLSTKELNMRQRRWLEL 240
                                                         + KELNMRQRRWLEL
Sbjct: 736  SHEQNYPTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLEL 795

Query: 241  VKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIVVLVGAVTIQLA 300
            VKDYDCEILYHPGKANVV DALSRKVSHSAALITRQA LHRDLERAEI V VGAVT+QLA
Sbjct: 796  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLA 855

Query: 301  QLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGRLLFERRLCVPSDSAVK 360
            QLT+Q TLRQR IDAQ NDPYLVEKRGLAEAGQAVEFS+SSDG LLFERRLCVPSDSAVK
Sbjct: 856  QLTIQPTLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVK 915

Query: 361  TELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG 403
            TELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG
Sbjct: 916  TELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAG 975

[Close]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 3.6e-198
Identity = 381/533 (71.48%), Postives = 387/533 (72.61%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

[Close]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 3.6e-198
Identity = 381/533 (71.48%), Postives = 388/533 (72.80%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDS VKTELLS+AHSS FSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

[Close]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.7e-198
Identity = 381/533 (71.48%), Postives = 387/533 (72.61%), Query Frame = 0


Query: 1    MSFSLTNALAVFMDLMNRVFREFLDTLVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSF LTNA AVFMDLMNRVFREFLDT VIVFIDDILIYSKTEAEHE HLR+VLQTLRDNK
Sbjct: 770  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNK 829

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG--- 120
            LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAG   
Sbjct: 830  LYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 889

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 890  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 949

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 950  TSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1009

Query: 241  --------LLSTKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITR 300
                      + KELNMRQRRWLELVKDYDCEILYHPGKANVV DALSRKVSHSAALITR
Sbjct: 1010 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1069

Query: 301  QAPLHRDLERAEIVVLVGAVTIQLAQLTVQQTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEI V VGAVT+QLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1070 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1129

Query: 361  EFSISSDGRLLFERRLCVPSDSAVKTELLSKAHSSQFSMHPGSTKMYQDLKRVYWWRNMK 403
            EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSS FSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1130 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1189

[Close]

BLAST of Cmc01g0019811 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 5.5e-13
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 48  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 107
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSEVRSFLGLAG 118
            +E+R FLGL G
Sbjct: 63  TTELRGFLGLTG 74

The following BLAST results are available for this feature:

BLAST of Cmc01g0019811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035938.1	2.9e-202	78.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037817.1	3.0e-199	74.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	7.5e-198	71.48	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	7.5e-198	71.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	9.8e-198	71.48	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0019811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	6.2e-38	23.94	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.2e-38	23.94	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.2e-38	23.94	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.2e-38	23.94	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	6.2e-38	23.94	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0019811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZD6	1.4e-202	78.75	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE...	[more]
A0A5A7T8B6	1.5e-199	74.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5D3BPI1	3.6e-198	71.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	3.6e-198	71.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7V1N3	4.7e-198	71.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]

BLAST of Cmc01g0019811 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.5e-13	47.22	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 251..307 e-value: 3.3E-17 score: 62.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 315..402 e-value: 2.6E-15 score: 58.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 6..81 e-value: 2.1E-12 score: 47.0
None	No IPR available	GENE3D	1.10.340.70		coord: 216..306 e-value: 2.0E-18 score: 68.4
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 243..402
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.77668E-34 score: 123.86
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 5.8E-32 score: 112.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 318..402 score: 9.339043
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..144
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 319..401

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0019811.1	Cmc01g0019811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity