Cmc01g0017721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0017721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr01: 15606282 .. 15607382 (+)
RNA-Seq Expression	Cmc01g0017721
Synteny	Cmc01g0017721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGAGAAGATGGCTTAAGTTTGTGAAGGATTACGACTGCGAGATTCTGTATCACCTGGGAAAGGCAAATGTAGTAGCTGATGCACTGAGTAGGAAGGTTGCCCATTCAACAGCGCTTATCACCAAGCAAGCTCCCTTACTCAGAGATTTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGAAAGTTACCTCACAGTTGACTCAATTGTCGGTGCAGCCGACCTTGAGACAGAGGATCATTGTTACTCAGCTAAATGATCCTTATTTGGTCGAGAAATGTCTATTAGCAGAGGCAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACTATGGCCTTACGTTTGAGGGACGTCTGTGCGTGCCCGAAGATAGTGCAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTTTCCATTTACTATGCACCCTAGAAGTACGAAGATGTACCAAGGTTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAAACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAAACAGAGGCCAACAGGGTTGTTGCAACCCTTAAGTGTGCCAGGATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACAGGACTGTTCAGGACTCAGAACTATACAGTCATTTGGGTTGTTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCTAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACCGAGATAGCGAGACTGCATGGAGTACCTGTATCTATCGTTTCTAACAAAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCATCTTGCATTGAGCACGAGGTTAGACTTCAGCACAGCTTTTTATCTCCAGACTGATAGCCAAACAGAAAGGTTGGACCAGATTTTAGAGGACATGCTGCGATCTTGTGTGCTAGAGTTTTCAGGGAGTTGGGACTCCTATTTACATTTGATGAAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCACCGTTTGAAGCTCTATATGGTAGGTGTTGCAGATCCCCTGTTTGTTGGGGGGAGATAGGCTAA

mRNA sequence

ATGAGACAGAGAAGATGGCTTAAGTTTGTGAAGGATTACGACTGCGAGATTCTGTATCACCTGGGAAAGGCAAATGTAGTAGCTGATGCACTGAGTAGGAAGGTTGCCCATTCAACAGCGCTTATCACCAAGCAAGCTCCCTTACTCAGAGATTTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGAAAGTTACCTCACAGTTGACTCAATTGTCGGTGCAGCCGACCTTGAGACAGAGGATCATTGTTACTCAGCTAAATGATCCTTATTTGGTCGAGAAATGTCTATTAGCAGAGGCAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACTATGGCCTTACGTTTGAGGGACGTCTGTGCGTGCCCGAAGATAGTGCAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTTTCCATTTACTATGCACCCTAGAAGTACGAAGATGTACCAAGGTTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAAACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAAACAGAGGCCAACAGGGTTGTTGCAACCCTTAAGTGTGCCAGGATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACAGGACTGTTCAGGACTCAGAACTATACAGTCATTTGGGTTGTTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCTAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACCGAGATAGCGAGACTGCATGGAGTACCTGTATCTATCGTTTCTAACAAAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCATCTTGCATTGAGCACGAGGTTAGACTTCAGCACAGCTTTTTATCTCCAGACTGATAGCCAAACAGAAAGGTTGGACCAGATTTTAGAGGACATGCTGCGATCTTGTGTGCTAGAGTTTTCAGGGAGTTGGGACTCCTATTTACATTTGATGAAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCACCGTTTGAAGCTCTATATGGTAGGTGTTGCAGATCCCCTGTTTGTTGGGGGGAGATAGGCTAA

Coding sequence (CDS)

ATGAGACAGAGAAGATGGCTTAAGTTTGTGAAGGATTACGACTGCGAGATTCTGTATCACCTGGGAAAGGCAAATGTAGTAGCTGATGCACTGAGTAGGAAGGTTGCCCATTCAACAGCGCTTATCACCAAGCAAGCTCCCTTACTCAGAGATTTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGAAAGTTACCTCACAGTTGACTCAATTGTCGGTGCAGCCGACCTTGAGACAGAGGATCATTGTTACTCAGCTAAATGATCCTTATTTGGTCGAGAAATGTCTATTAGCAGAGGCAGGGCAAGGTGAGGATTTCTCCATATCCTCTGACTATGGCCTTACGTTTGAGGGACGTCTGTGCGTGCCCGAAGATAGTGCAGTCAAGACAGAGCTTTTGTCTGAGGCTCACAGTTTTCCATTTACTATGCACCCTAGAAGTACGAAGATGTACCAAGGTTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAAACTTTGTCAGTAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAAACAGAGGCCAACAGGGTTGTTGCAACCCTTAAGTGTGCCAGGATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACAGGACTGTTCAGGACTCAGAACTATACAGTCATTTGGGTTGTTGTTGACAGACTCACGAAGTCAGCCCACTTTGTTCTAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACCGAGATAGCGAGACTGCATGGAGTACCTGTATCTATCGTTTCTAACAAAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCATCTTGCATTGAGCACGAGGTTAGACTTCAGCACAGCTTTTTATCTCCAGACTGATAGCCAAACAGAAAGGTTGGACCAGATTTTAGAGGACATGCTGCGATCTTGTGTGCTAGAGTTTTCAGGGAGTTGGGACTCCTATTTACATTTGATGAAGTTCGCCTATAATAACAGTTACCAGGCCACCATTGGTATGGCACCGTTTGAAGCTCTATATGGTAGGTGTTGCAGATCCCCTGTTTGTTGGGGGGAGATAGGCTAA

Protein sequence

MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSVGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLCVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVKAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEIG

Homology

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BLAST of Cmc01g0017721 vs. NCBI nr
Match: KAA0025113.1 (pol protein [Cucumis melo var. makuwa] >TYK19355.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 731.1 bits (1886), Expect = 4.7e-207
Identity = 355/366 (96.99%), Postives = 362/366 (98.91%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWLK VKDYDCEILYH GKANVVAD LSRKVAHSTALITKQAPLLRDFERAEIAVS
Sbjct: 1   MRQRRWLKLVKDYDCEILYHPGKANVVADVLSRKVAHSTALITKQAPLLRDFERAEIAVS 60

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAG+GEDFSISSDYGLTFEGRL
Sbjct: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGKGEDFSISSDYGLTFEGRL 120

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELLSEA+SFPFT+HP STKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV
Sbjct: 121 CVPEDSAVKTELLSEAYSFPFTVHPGSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST 240
           KAP+QRPTGLLQPLSVPGWKWES+SMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST
Sbjct: 181 KAPRQRPTGLLQPLSVPGWKWESMSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST 240

Query: 241 YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS 300
           YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS
Sbjct: 241 YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS 300

Query: 301 QTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV 360
           QTERL+QIL+DMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV
Sbjct: 301 QTERLNQILKDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV 360

Query: 361 CWGEIG 367
           CWGEIG
Sbjct: 361 CWGEIG 366

[Close]

BLAST of Cmc01g0017721 vs. NCBI nr
Match: KAA0041490.1 (hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 650.6 bits (1677), Expect = 8.1e-183
Identity = 319/367 (86.92%), Postives = 338/367 (92.10%), Query Frame = 0


Query: 1    MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
            MR RRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQAPLLRDFERAEIAVS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
            VG+VTSQL QLSVQPTLRQRIIV QLNDPYLVEK  L E GQGEDFSIS D GL FEGRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
            CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWRNMKREVA+FVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
            KAP+QRP GLLQPLSVPGWKWESVSMDFITGL +T + YTVIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
            TYTASKWGQLYMTEI RLHGVPVSI+S++D RFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
             +T+RL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMA FEALYG+CCRSP
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEALYGKCCRSP 1088

Query: 361  VCWGEIG 367
            VCWGE+G
Sbjct: 1089 VCWGEVG 1095

[Close]

BLAST of Cmc01g0017721 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 649.0 bits (1673), Expect = 2.4e-182
Identity = 316/367 (86.10%), Postives = 337/367 (91.83%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
           KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +T + +TVIWVVVDRLTKSAHFV GKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
           TYTASKWGQLYMTEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
            QTERL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 616

Query: 361 VCWGEIG 367
           VCWGE+G
Sbjct: 617 VCWGEVG 623

[Close]

BLAST of Cmc01g0017721 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 647.9 bits (1670), Expect = 5.3e-182
Identity = 315/367 (85.83%), Postives = 337/367 (91.83%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWL+ VKDYDCEILYH GKANVVAD+LSRKVAHS ALITKQ PLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 627 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
           KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +T + YTVIWVVVDRLTKSAHFV GKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
           TYTASKWGQLY+TEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 747 TYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALCTRLDFSTAFHPQTD 806

Query: 301 SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
            QTERL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 866

Query: 361 VCWGEIG 367
           VCWGE+G
Sbjct: 867 VCWGEVG 873

[Close]

BLAST of Cmc01g0017721 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 645.6 bits (1664), Expect = 2.6e-181
Identity = 315/367 (85.83%), Postives = 334/367 (91.01%), Query Frame = 0


Query: 1    MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
            MRQRRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQ PLLRDFERAEI VS
Sbjct: 969  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEITVS 1028

Query: 61   VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
            VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 1029 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 1088

Query: 121  CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
            CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 1089 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1148

Query: 181  KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQ-NYTVIWVVVDRLTKSAHFVLGKS 240
            KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +TQ  YTVIWVVVDRLTKSAHFV GKS
Sbjct: 1149 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAHFVPGKS 1208

Query: 241  TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
            TYTASKWGQLYMTEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 1209 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1268

Query: 301  SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
             QTERL+QILEDMLR+CVLEFS SWDS+LHLM+FAYNNSYQATI MAPFEALYG+CCRSP
Sbjct: 1269 GQTERLNQILEDMLRACVLEFSRSWDSHLHLMEFAYNNSYQATISMAPFEALYGKCCRSP 1328

Query: 361  VCWGEIG 367
            VCWGE+G
Sbjct: 1329 VCWGEVG 1335

[Close]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 95/351 (27.07%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 2    RQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSV 61
            R  RW  F++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLC 121
                + + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 919

Query: 122  VPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVK 181
            +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K
Sbjct: 920  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 979

Query: 182  APKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTY 241
            +   +P G LQP+      WES+SMDFIT L  +  Y  ++VVVDR +K A  V    + 
Sbjct: 980  SRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSI 1039

Query: 242  TASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQ 301
            TA +  +++   +    G P  I+++ D  FTS+ WK      +  + FS  +  QTD Q
Sbjct: 1040 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1099

Query: 302  TERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALY 353
            TER +Q +E +LR        +W  ++ L++ +YNN+  +   M PFE ++
Sbjct: 1100 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 95/351 (27.07%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 2    RQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSV 61
            R  RW  F++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLC 121
                + + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 919

Query: 122  VPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVK 181
            +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K
Sbjct: 920  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 979

Query: 182  APKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTY 241
            +   +P G LQP+      WES+SMDFIT L  +  Y  ++VVVDR +K A  V    + 
Sbjct: 980  SRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSI 1039

Query: 242  TASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQ 301
            TA +  +++   +    G P  I+++ D  FTS+ WK      +  + FS  +  QTD Q
Sbjct: 1040 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1099

Query: 302  TERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALY 353
            TER +Q +E +LR        +W  ++ L++ +YNN+  +   M PFE ++
Sbjct: 1100 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 95/351 (27.07%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 2    RQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSV 61
            R  RW  F++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLC 121
                + + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 919

Query: 122  VPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVK 181
            +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K
Sbjct: 920  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 979

Query: 182  APKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTY 241
            +   +P G LQP+      WES+SMDFIT L  +  Y  ++VVVDR +K A  V    + 
Sbjct: 980  SRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSI 1039

Query: 242  TASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQ 301
            TA +  +++   +    G P  I+++ D  FTS+ WK      +  + FS  +  QTD Q
Sbjct: 1040 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1099

Query: 302  TERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALY 353
            TER +Q +E +LR        +W  ++ L++ +YNN+  +   M PFE ++
Sbjct: 1100 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 95/351 (27.07%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 2    RQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSV 61
            R  RW  F++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLC 121
                + + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 919

Query: 122  VPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVK 181
            +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K
Sbjct: 920  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 979

Query: 182  APKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTY 241
            +   +P G LQP+      WES+SMDFIT L  +  Y  ++VVVDR +K A  V    + 
Sbjct: 980  SRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSI 1039

Query: 242  TASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQ 301
            TA +  +++   +    G P  I+++ D  FTS+ WK      +  + FS  +  QTD Q
Sbjct: 1040 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1099

Query: 302  TERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALY 353
            TER +Q +E +LR        +W  ++ L++ +YNN+  +   M PFE ++
Sbjct: 1100 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-39
Identity = 95/351 (27.07%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 2    RQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVSV 61
            R  RW  F++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRLC 121
                + + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 919

Query: 122  VPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQVK 181
            +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K
Sbjct: 920  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 979

Query: 182  APKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKSTY 241
            +   +P G LQP+      WES+SMDFIT L  +  Y  ++VVVDR +K A  V    + 
Sbjct: 980  SRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSI 1039

Query: 242  TASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDSQ 301
            TA +  +++   +    G P  I+++ D  FTS+ WK      +  + FS  +  QTD Q
Sbjct: 1040 TAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQ 1099

Query: 302  TERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALY 353
            TER +Q +E +LR        +W  ++ L++ +YNN+  +   M PFE ++
Sbjct: 1100 TERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL
Match: A0A5A7SKB9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00070 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.3e-207
Identity = 355/366 (96.99%), Postives = 362/366 (98.91%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWLK VKDYDCEILYH GKANVVAD LSRKVAHSTALITKQAPLLRDFERAEIAVS
Sbjct: 1   MRQRRWLKLVKDYDCEILYHPGKANVVADVLSRKVAHSTALITKQAPLLRDFERAEIAVS 60

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAG+GEDFSISSDYGLTFEGRL
Sbjct: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGKGEDFSISSDYGLTFEGRL 120

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELLSEA+SFPFT+HP STKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV
Sbjct: 121 CVPEDSAVKTELLSEAYSFPFTVHPGSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST 240
           KAP+QRPTGLLQPLSVPGWKWES+SMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST
Sbjct: 181 KAPRQRPTGLLQPLSVPGWKWESMSMDFITGLFRTQNYTVIWVVVDRLTKSAHFVLGKST 240

Query: 241 YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS 300
           YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS
Sbjct: 241 YTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTDS 300

Query: 301 QTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV 360
           QTERL+QIL+DMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV
Sbjct: 301 QTERLNQILKDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSPV 360

Query: 361 CWGEIG 367
           CWGEIG
Sbjct: 361 CWGEIG 366

[Close]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL
Match: A0A5A7TDX1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00780 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.9e-183
Identity = 319/367 (86.92%), Postives = 338/367 (92.10%), Query Frame = 0


Query: 1    MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
            MR RRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQAPLLRDFERAEIAVS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
            VG+VTSQL QLSVQPTLRQRIIV QLNDPYLVEK  L E GQGEDFSIS D GL FEGRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
            CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWRNMKREVA+FVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
            KAP+QRP GLLQPLSVPGWKWESVSMDFITGL +T + YTVIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
            TYTASKWGQLYMTEI RLHGVPVSI+S++D RFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
             +T+RL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMA FEALYG+CCRSP
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEALYGKCCRSP 1088

Query: 361  VCWGEIG 367
            VCWGE+G
Sbjct: 1089 VCWGEVG 1095

[Close]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 316/367 (86.10%), Postives = 337/367 (91.83%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQ PLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
           KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +T + +TVIWVVVDRLTKSAHFV GKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
           TYTASKWGQLYMTEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
            QTERL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 616

Query: 361 VCWGEIG 367
           VCWGE+G
Sbjct: 617 VCWGEVG 623

[Close]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 2.5e-182
Identity = 315/367 (85.83%), Postives = 337/367 (91.83%), Query Frame = 0


Query: 1   MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
           MRQRRWL+ VKDYDCEILYH GKANVVAD+LSRKVAHS ALITKQ PLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
           VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
           CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 627 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRT-QNYTVIWVVVDRLTKSAHFVLGKS 240
           KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +T + YTVIWVVVDRLTKSAHFV GKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
           TYTASKWGQLY+TEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 747 TYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALCTRLDFSTAFHPQTD 806

Query: 301 SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
            QTERL+QILEDMLR+CVLEFSGSWDS+LHLM+FAYNNSYQATIGMAPFEALYG+CCRSP
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 866

Query: 361 VCWGEIG 367
           VCWGE+G
Sbjct: 867 VCWGEVG 873

[Close]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.3e-181
Identity = 315/367 (85.83%), Postives = 334/367 (91.01%), Query Frame = 0


Query: 1    MRQRRWLKFVKDYDCEILYHLGKANVVADALSRKVAHSTALITKQAPLLRDFERAEIAVS 60
            MRQRRWL+ VKDYDCEILYH GKANVVADALSRKVAHS ALITKQ PLLRDFERAEI VS
Sbjct: 969  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEITVS 1028

Query: 61   VGKVTSQLTQLSVQPTLRQRIIVTQLNDPYLVEKCLLAEAGQGEDFSISSDYGLTFEGRL 120
            VG+VT+QL QLSVQPTLRQ+II  QLNDPYL EK  + E GQGEDFSISSD GL FEGRL
Sbjct: 1029 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 1088

Query: 121  CVPEDSAVKTELLSEAHSFPFTMHPRSTKMYQGLRCVYWWRNMKREVANFVSRCLVCQQV 180
            CVPEDSAVKTELL+EAHS PFTMHP STKMYQ LR VYWWR MKREVA+FVSRCLVCQQV
Sbjct: 1089 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1148

Query: 181  KAPKQRPTGLLQPLSVPGWKWESVSMDFITGLFRTQ-NYTVIWVVVDRLTKSAHFVLGKS 240
            KAP+Q P GLLQPLSVPGWKWESVSMDFITGL +TQ  YTVIWVVVDRLTKSAHFV GKS
Sbjct: 1149 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAHFVPGKS 1208

Query: 241  TYTASKWGQLYMTEIARLHGVPVSIVSNKDARFTSKFWKGLHLALSTRLDFSTAFYLQTD 300
            TYTASKWGQLYMTEI RLHGVPVSI+S++DARFTSKFWKGL LAL TRLDFSTAF+ QTD
Sbjct: 1209 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1268

Query: 301  SQTERLDQILEDMLRSCVLEFSGSWDSYLHLMKFAYNNSYQATIGMAPFEALYGRCCRSP 360
             QTERL+QILEDMLR+CVLEFS SWDS+LHLM+FAYNNSYQATI MAPFEALYG+CCRSP
Sbjct: 1269 GQTERLNQILEDMLRACVLEFSRSWDSHLHLMEFAYNNSYQATISMAPFEALYGKCCRSP 1328

Query: 361  VCWGEIG 367
            VCWGE+G
Sbjct: 1329 VCWGEVG 1335

The following BLAST results are available for this feature:

BLAST of Cmc01g0017721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025113.1	4.7e-207	96.99	pol protein [Cucumis melo var. makuwa] >TYK19355.1 pol protein [Cucumis melo var...	[more]
KAA0041490.1	8.1e-183	86.92	hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]	[more]
KAA0040942.1	2.4e-182	86.10	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	5.3e-182	85.83	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	2.6e-181	85.83	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0017721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.0e-39	27.07	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.0e-39	27.07	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.0e-39	27.07	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.0e-39	27.07	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.0e-39	27.07	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SKB9	2.3e-207	96.99	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00070 P...	[more]
A0A5A7TDX1	3.9e-183	86.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G...	[more]
A0A5A7TBV4	1.1e-182	86.10	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]
A0A5A7TVN9	2.5e-182	85.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7V646	1.3e-181	85.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc01g0017721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 191..364 e-value: 1.4E-34 score: 121.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 1.3E-14 score: 53.9
None	No IPR available	GENE3D	1.10.340.70		coord: 93..181 e-value: 5.6E-16 score: 60.5
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 119..350
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..355 score: 13.077947
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0017721.1	Cmc01g0017721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding