Cmc01g0017221 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0017221
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr01: 15171316 .. 15173750 (+)
RNA-Seq ExpressionCmc01g0017221
SyntenyCmc01g0017221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATAG

mRNA sequence

ATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATAG

Coding sequence (CDS)

ATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATAG

Protein sequence

MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQREYVSIATKRDIGRETVPSTWQKRRRLNKGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQ
Homology
[Close]
BLAST of Cmc01g0017221 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 224  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 283

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 284  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 343

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 344  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 403

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 404  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 463

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 464  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 523

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 524  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 583

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 584  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 643

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 644  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 703

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 704  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 763

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 764  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 823

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 824  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 883

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 884  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 943

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 944  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1003

[Close]
BLAST of Cmc01g0017221 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 5.8e-125
Identity = 263/732 (35.93%), Postives = 402/732 (54.92%), Query Frame = 0 

Query: 78   TMRVGTGHVVSAIAVGGLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSLTF 137
            T+++G         +G   +C++ +    L+L++V  VPDL+ NLIS   L    Y   F
Sbjct: 321  TVKMGNTSYSKIAGIGD--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYF 380

Query: 138  NVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHL 197
               K  + K  + I        LY   +   +  LN    + ++               L
Sbjct: 381  ANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISV--------------DL 440

Query: 198  WHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELV 257
            WH R+GH++   ++ L K  L+S  +  ++  C+ CL GK  +  F     R    L+LV
Sbjct: 441  WHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLV 500

Query: 258  HSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTI 317
            +SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +
Sbjct: 501  YSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKL 560

Query: 318  KTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAH 377
            K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  A 
Sbjct: 561  KRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAK 620

Query: 378  LPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNP 437
            LP SFWG AVQTA Y++N  PS  ++ E P ++W  ++ S  H +++GC   AHV +   
Sbjct: 621  LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 680

Query: 438  KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNEL 497
             KL+ +S  C+F+GY     G   +DP   KV  S +  F  E  +R     S+ V N +
Sbjct: 681  TKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGI 740

Query: 498  ----------------SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTHQP 557
                            ++ TT+  +   E+P             +  V H       HQP
Sbjct: 741  IPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQP 800

Query: 558  QSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLEL 617
                  RRS R      RY S TE + +  D    +P + K+ +   +K++ +KAM  E+
Sbjct: 801  L-----RRSERPRVESRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEEM 860

Query: 618  ESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEET 677
            ES+  N  + LV+ P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E 
Sbjct: 861  ESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEI 920

Query: 678  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKIC 737
            FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +C
Sbjct: 921  FSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVC 980

Query: 738  KLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILL 776
            KLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L+
Sbjct: 981  KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1026

[Close]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 333.6 bits (854), Expect = 6.1e-90
Identity = 237/785 (30.19%), Postives = 376/785 (47.90%), Query Frame = 0 

Query: 104  LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SAKLENNLYVLRS 163
            + LE+V    +   NL+SVK L E   S+ F+ + V I KNG+ +  ++ + NN+ V+  
Sbjct: 343  ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVIN- 402

Query: 164  LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-- 223
                             Q   +    K N  LWH R GHI+  ++  + +  + S+    
Sbjct: 403  ----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLL 462

Query: 224  ---ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFI 283
               E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         YF+
Sbjct: 463  NNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDVCGPITPVTLDDKNYFV 522

Query: 284  TFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYL 343
             F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + + + 
Sbjct: 523  IFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFC 582

Query: 344  MECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCV 403
            ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV TA Y++N +
Sbjct: 583  VKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRI 642

Query: 404  PSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG 463
            PS+++   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +FVGY P G
Sbjct: 643  PSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNG 702

Query: 464  --------------------------TRGGYFYD--------------PKDNKVFVST-- 523
                                      +R   F                P D++  + T  
Sbjct: 703  FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 762

Query: 524  --------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTRVV 583
                    N  FL++    E+K       KI+  E              K++ E +   +
Sbjct: 763  PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFL 822

Query: 584  EEPSALTRVVHVGSSTRTHQPQSLREP------------------------RRSGRVTNL 643
             E     R  H+  S  +  P   RE                         RRS R+   
Sbjct: 823  NESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTK 882

Query: 644  P-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 703
            P I Y     +L   V++   I  + P +F +     DK  W +A+N EL +   N+ W 
Sbjct: 883  PQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWT 942

Query: 704  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 763
            +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA + S 
Sbjct: 943  ITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSF 1002

Query: 764  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 777
            R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      +CKLN++IYGLK
Sbjct: 1003 RFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLK 1062

[Close]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-80
Identity = 234/839 (27.89%), Postives = 365/839 (43.50%), Query Frame = 0 

Query: 68   SWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE 127
            S  Q  TG   + V  G  +     G   L  +   L L N+  VP++ +NLISV  L  
Sbjct: 349  SLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCN 408

Query: 128  ------QSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQN 187
                  + +  +F V  +     GV +   K ++ LY               +  A +Q 
Sbjct: 409  ANGVSVEFFPASFQVKDL---NTGVPLLQGKTKDELY--------------EWPIASSQP 468

Query: 188  KRLKISPKENA--HLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKR 247
              L  SP   A    WH RLGH   + +  ++ N  LS L   +    C  CL  K  K 
Sbjct: 469  VSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKV 528

Query: 248  PFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEK 307
            PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  E 
Sbjct: 529  PFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKET 588

Query: 308  FKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERR 367
            F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SER+
Sbjct: 589  FITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERK 648

Query: 368  NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 427
            +R +++   +++S+A +P ++W YA   AVY++N +P+  +  E+P +   G   +    
Sbjct: 649  HRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKL 708

Query: 428  RIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE- 487
            R++GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E  
Sbjct: 709  RVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENC 768

Query: 488  ----------DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EEPSA 547
                        ++E +  S  V    S  TT P+   V                  PSA
Sbjct: 769  FPFSNYLATLSPVQEQRRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSA 828

Query: 548  LTRVVHVGSS----------------------------------TRTHQ----------- 607
              R   V SS                                  T+TH            
Sbjct: 829  PFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTN 888

Query: 608  ------PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIEDPLT 667
                   QSL  P +S   +  P    S + T              L  I + + + PL 
Sbjct: 889  ESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLN 948

Query: 668  F------------------------------KKAMEDVDKDEWIKAMNLELESMYFNSVW 727
                                           + A++ +  + W  AM  E+ +   N  W
Sbjct: 949  THSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTW 1008

Query: 728  DLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLK 772
            DLV  P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    
Sbjct: 1009 DLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKST 1068

[Close]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-78
Identity = 231/842 (27.43%), Postives = 368/842 (43.71%), Query Frame = 0 

Query: 68   SWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE 127
            S+ Q  TG   + +  G  +     G   L      L L  V  VP++ +NLISV  L  
Sbjct: 328  SFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCN 387

Query: 128  ------QSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQN 187
                  + +  +F V  +     GV +   K ++ LY     +S+A+    MF +  +  
Sbjct: 388  TNRVSVEFFPASFQVKDL---NTGVPLLQGKTKDELYEWPIASSQAV---SMFASPCS-- 447

Query: 188  KRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPF 247
                   K     WH RLGH +L  +  ++ N  L  L   + L  C  C   K  K PF
Sbjct: 448  -------KATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF 507

Query: 248  TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFK 307
            +     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  + F 
Sbjct: 508  SNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFI 567

Query: 308  EYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNR 367
             +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R
Sbjct: 568  IFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHR 627

Query: 368  TLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRI 427
             +++M  +++S+A +P ++W YA   AVY++N +P+  +  ++P +   G+  +    ++
Sbjct: 628  HIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKV 687

Query: 428  WGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE--- 487
            +GC  +  +   N  KLE +SK C F+GY               +++ S +  F E    
Sbjct: 688  FGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFP 747

Query: 488  ------DHIREHKPRSKIVLNELSKETTEPSTRVV------------------EEPSAL- 547
                        + RS    N  S  TT P+T +V                    PS L 
Sbjct: 748  FSTTNFGVSTSQEQRSDSAPNWPS-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLC 807

Query: 548  ----------------------TRVVHVG--SSTRTHQPQ-----------------SLR 607
                                  T   H G   + + HQ Q                 S  
Sbjct: 808  TTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPN 867

Query: 608  EPRRSGRVTNLPIRYMSLTETLTVISDGDI------------------------------ 667
             P ++  +   PI    +    T IS+ +                               
Sbjct: 868  SPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVN 927

Query: 668  ----------------------------EDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 727
                                         +P T  +AM+D   D W +AM  E+ +   N
Sbjct: 928  THSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGN 987

Query: 728  SVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVA 772
              WDLV   P  V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV 
Sbjct: 988  HTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVI 1047

[Close]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-27
Identity = 104/401 (25.94%), Postives = 176/401 (43.89%), Query Frame = 0 

Query: 91  AVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICS 150
           A+G L    Q            P++  +L+S+  L  Q+ +  F  N      +G  +  
Sbjct: 494 AIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRN-TLERSDGTVLAP 553

Query: 151 AKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERL 210
                + Y    L+ K L+ + + K  I    + K   K    L H  LGH N   I++ 
Sbjct: 554 IVKHGDFY---WLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKS 613

Query: 211 VKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDL 270
           +K   ++ L+E+ +         C  CL GK TK     KG R K     EP + +H+D+
Sbjct: 614 LKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDI 673

Query: 271 CGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKT 330
            GP++   +    YFI+FTD+ +R+ +VY +  + E   L  F    A ++N  +  +  
Sbjct: 674 FGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLV 733

Query: 331 FRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLP 390
            + DRG EY +     +    GI +  +     + +GV+ER NRTLL+  R+++  + LP
Sbjct: 734 IQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLP 793

Query: 391 NSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKL 450
           N  W  AV+ +  I N + S   ++   +   G  G  +     +G P  V  +NP  K+
Sbjct: 794 NHLWFSAVEFSTIIRNSLVSPK-NDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKI 853

Query: 451 EPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEED 476
            PR      +   + + G   Y P   K   +TN   L+++
Sbjct: 854 HPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDN 888

[Close]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 225  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKK 284

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 285  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 344

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 345  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 404

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 405  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 464

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 465  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 524

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 525  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 584

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 585  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 644

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 645  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 704

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 705  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 764

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 765  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 824

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 825  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 884

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 885  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 944

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 945  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1004

[Close]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 750/811 (92.48%), Postives = 756/811 (93.22%), Query Frame = 0 

Query: 1    MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKPKLQR-----------------EYVSIAT 60
            MPSSSGNKKWKKKKGGQGNKANLAAAKTTKK K  +                 +Y++   
Sbjct: 224  MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 283

Query: 61   KRDIGR-----------ETVPSTWQKRRRLN-------KGISSWRQLETGEMTMRVGTGH 120
            K   G+           E   S W              +GISSWRQLETGEMTMRVGTGH
Sbjct: 284  KAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGH 343

Query: 121  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 180
            VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG
Sbjct: 344  VVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNG 403

Query: 181  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 240
            VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN
Sbjct: 404  VEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLN 463

Query: 241  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 300
            RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK
Sbjct: 464  RIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVK 523

Query: 301  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 360
            ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY
Sbjct: 524  ARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEY 583

Query: 361  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 420
            MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ
Sbjct: 584  MDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQ 643

Query: 421  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 480
            TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG
Sbjct: 644  TAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVG 703

Query: 481  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 540
            YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE
Sbjct: 704  YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEE 763

Query: 541  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 600
            PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK
Sbjct: 764  PSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFK 823

Query: 601  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 660
            KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK
Sbjct: 824  KAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFK 883

Query: 661  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 720
            ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET
Sbjct: 884  ARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEET 943

Query: 721  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 777
            IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR
Sbjct: 944  IYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKR 1003

[Close]
BLAST of Cmc01g0017221 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-45
Identity = 87/221 (39.37%), Postives = 139/221 (62.90%), Query Frame = 0 

Query: 559 EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 618
           ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 619 GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 678
           G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 679 NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 738
           NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 739 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIK 776
           Q   +   + +I       +++YVDDI++  N+   + ++K
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELK 301

[Close]
BLAST of Cmc01g0017221 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-16
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0 

Query: 531 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 590
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 591 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 650
             W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 651 LKSIRILLSIA 662
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

[Close]
BLAST of Cmc01g0017221 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.2 bits (165), Expect = 3.4e-11
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0 

Query: 179 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 238
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 239 PFTGKGHRAKEPLELVHSDLCGPMNV 265
            F+   H  K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]
BLAST of Cmc01g0017221 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 3.9e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0 

Query: 359 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 418
           NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 419 RIWGCPAHVLENNPKKLEPRSK 440
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:
BLAST of Cmc01g0017221 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048404.10.0e+0092.48gag/pol protein [Cucumis melo var. makuwa][more]
TYK14550.10.0e+0092.48gag/pol protein [Cucumis melo var. makuwa][more]
KAA0054490.10.0e+0092.48gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035879.10.0e+0092.48gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... [more]
KAA0047792.10.0e+0092.48gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc01g0017221 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109785.8e-12535.93Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041466.1e-9030.19Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW21.2e-8027.89Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.4e-7827.43Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q124911.1e-2725.94Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc01g0017221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SMH80.0e+0092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ60.0e+0092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7TWB90.0e+0092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031... [more]
A0A5D3CSZ60.0e+0092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... [more]
A0A5A7TZD70.0e+0092.48Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013... [more]
BLAST of Cmc01g0017221 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.11.6e-4539.37cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.16.0e-1637.40Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00300.13.4e-1139.53Gag-Pol-related retrotransposon family protein [more]
ATMG00710.13.9e-0735.37Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..533
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 195..771
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 590..776
e-value: 3.4E-62
score: 210.2
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 248..349
e-value: 5.4E-11
score: 42.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 246..411
score: 23.412086
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 186..235
e-value: 2.6E-14
score: 52.8
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 243..419
e-value: 1.4E-39
score: 137.5
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 590..768
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 245..405

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0017221.1Cmc01g0017221.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding