Cmc01g0014211 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTTCTGGGATCTGGCACTATTCATCTTACCCCATCATTTTCTCTGTCTTCTGTGTTATATTTGCCTAACTTATCCTATAATTTAATTTCTATTAGTCAACTTACTCATGACCTTAATTCTATTGTCTTGTTCTTTCCTGATTATTGCTTGTTTCAAGATTGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTTGGGAGGCCTTTATCTCTTTAATCACCAAGTACAGCAAGTTGTGGCGTGTCCTGTCGTTCCTTCTCCCTTTGAAGTTCATTATCGCTTGGGTCATCTATCTTTGTTCGTGTTGAAGAAACTTTATCCCGTATTTAGGTCTTTGTCCTCTTTAAATTGTGGTTCGTGTAAATTTGCTAAATTTCATCGTCTTAGTTTGAGTCCTCGAGTCAATAAACGAGCAAGTGCTCCATTTGAGTTAGTTCATTCTAATATTTGGGGTCCATGTCCAGTTGTATCTCAAACAAACTTTCGTTATTTTGTTACATTTATTGACGATCATTCTTGTCTAACTTGGTTATATTTAATGAAAAATCGTTCTAAGTTATTATCTCATTTTGTGTCTTTCATGCTTAAATAA ATGTCTGTTCTGGGATCTGGCACTATTCATCTTACCCCATCATTTTCTCTGTCTTCTGTGTTATATTTGCCTAACTTATCCTATAATTTAATTTCTATTAGTCAACTTACTCATGACCTTAATTCTATTGTCTTGTTCTTTCCTGATTATTGCTTGTTTCAAGATTGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTTGGGAGGCCTTTATCTCTTTAATCACCAAGTACAGCAAGTTGTGGCGTGTCCTGTCGTTCCTTCTCCCTTTGAAGTTCATTATCGCTTGGGTCATCTATCTTTGTTCGTGTTGAAGAAACTTTATCCCGTATTTAGGTCTTTGTCCTCTTTAAATTGTGGTTCGTGTAAATTTGCTAAATTTCATCGTCTTAGTTTGAGTCCTCGAGTCAATAAACGAGCAAGTGCTCCATTTGAGTTAGTTCATTCTAATATTTGGGGTCCATGTCCAGTTGTATCTCAAACAAACTTTCGTTATTTTGTTACATTTATTGACGATCATTCTTGTCTAACTTGGTTATATTTAATGAAAAATCGTTCTAAGTTATTATCTCATTTTGTGTCTTTCATGCTTAAATAA ATGTCTGTTCTGGGATCTGGCACTATTCATCTTACCCCATCATTTTCTCTGTCTTCTGTGTTATATTTGCCTAACTTATCCTATAATTTAATTTCTATTAGTCAACTTACTCATGACCTTAATTCTATTGTCTTGTTCTTTCCTGATTATTGCTTGTTTCAAGATTGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTTGGGAGGCCTTTATCTCTTTAATCACCAAGTACAGCAAGTTGTGGCGTGTCCTGTCGTTCCTTCTCCCTTTGAAGTTCATTATCGCTTGGGTCATCTATCTTTGTTCGTGTTGAAGAAACTTTATCCCGTATTTAGGTCTTTGTCCTCTTTAAATTGTGGTTCGTGTAAATTTGCTAAATTTCATCGTCTTAGTTTGAGTCCTCGAGTCAATAAACGAGCAAGTGCTCCATTTGAGTTAGTTCATTCTAATATTTGGGGTCCATGTCCAGTTGTATCTCAAACAAACTTTCGTTATTTTGTTACATTTATTGACGATCATTCTTGTCTAACTTGGTTATATTTAATGAAAAATCGTTCTAAGTTATTATCTCATTTTGTGTCTTTCATGCTTAAATAA MSVLGSGTIHLTPSFSLSSVLYLPNLSYNLISISQLTHDLNSIVLFFPDYCLFQDCVTKKIIGRGYELGGLYLFNHQVQQVVACPVVPSPFEVHYRLGHLSLFVLKKLYPVFRSLSSLNCGSCKFAKFHRLSLSPRVNKRASAPFELVHSNIWGPCPVVSQTNFRYFVTFIDDHSCLTWLYLMKNRSKLLSHFVSFMLK Homology
BLAST of Cmc01g0014211 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90 Identity = 167/195 (85.64%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of Cmc01g0014211 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65 Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of Cmc01g0014211 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65 Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of Cmc01g0014211 vs. NCBI nr
Match: XP_031744756.1 (uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65 Identity = 123/144 (85.42%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of Cmc01g0014211 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 3.7e-65 Identity = 123/143 (86.01%), Postives = 130/143 (90.91%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.3e-16 Identity = 62/193 (32.12%), Postives = 96/193 (49.74%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14 Identity = 58/192 (30.21%), Postives = 97/192 (50.52%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.5e-11 Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 47.0 bits (110), Expect = 2.9e-04 Identity = 40/120 (33.33%), Postives = 56/120 (46.67%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy TrEMBL
Match: A0A438H537 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4131 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 6.0e-61 Identity = 118/194 (60.82%), Postives = 146/194 (75.26%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy TrEMBL
Match: A5AWD0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019194 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60 Identity = 117/194 (60.31%), Postives = 146/194 (75.26%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy TrEMBL
Match: A0A438GAA6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2601 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60 Identity = 117/194 (60.31%), Postives = 146/194 (75.26%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy TrEMBL
Match: B0FBS2 (Uncharacterized protein OS=Vitis hybrid cultivar OX=241073 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60 Identity = 117/194 (60.31%), Postives = 146/194 (75.26%), Query Frame = 0
BLAST of Cmc01g0014211 vs. ExPASy TrEMBL
Match: A0A438DZQ8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3537 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.9e-60 Identity = 116/194 (59.79%), Postives = 145/194 (74.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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