Cmc01g0013441 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGTCGCTCACTTAATCAATAGAATTCCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTCTGAGGTTCCTCTTTGTGTGTTTGGATGTATCGCTTATGTCCATAATTTTGGCCTTAATCAGACCAAATTTACCCTTCGGGCTCAGGCTTGTGTGTTTATTGGATATCCCCTTCACCAGTGCGGTTATAAATGTTTTCACCCGTCGTTTAGGAAATACTTTGTCACTATGGATGTTACTTTCTGTGAAAACGGACCCTACTTTCCTGTTAGCCATCCTCAGGGGGAGAGTGTGAGTGAATAG ATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGTCGCTCACTTAATCAATAGAATTCCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTCTGAGGTTCCTCTTTGTGTGTTTGGATGTATCGCTTATGTCCATAATTTTGGCCTTAATCAGACCAAATTTACCCTTCGGGCTCAGGCTTGTGTGTTTATTGGATATCCCCTTCACCAGTGCGGTTATAAATGTTTTCACCCGTCGTTTAGGAAATACTTTGTCACTATGGATGTTACTTTCTGTGAAAACGGACCCTACTTTCCTGTTAGCCATCCTCAGGGGGAGAGTGTGAGTGAATAG ATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGTCGCTCACTTAATCAATAGAATTCCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTCTGAGGTTCCTCTTTGTGTGTTTGGATGTATCGCTTATGTCCATAATTTTGGCCTTAATCAGACCAAATTTACCCTTCGGGCTCAGGCTTGTGTGTTTATTGGATATCCCCTTCACCAGTGCGGTTATAAATGTTTTCACCCGTCGTTTAGGAAATACTTTGTCACTATGGATGTTACTTTCTGTGAAAACGGACCCTACTTTCCTGTTAGCCATCCTCAGGGGGAGAGTGTGAGTGAATAG MLSTSLPSYLWGDAILTVAHLINRIPSRILHLQTPLDCLKESYPSTRLVSEVPLCVFGCIAYVHNFGLNQTKFTLRAQACVFIGYPLHQCGYKCFHPSFRKYFVTMDVTFCENGPYFPVSHPQGESVSE Homology
BLAST of Cmc01g0013441 vs. NCBI nr
Match: TYK08009.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65 Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Cmc01g0013441 vs. NCBI nr
Match: KAA0048248.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65 Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Cmc01g0013441 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 247.7 bits (631), Expect = 5.6e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Cmc01g0013441 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 247.7 bits (631), Expect = 5.6e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Cmc01g0013441 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 247.7 bits (631), Expect = 5.6e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-11 Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09 Identity = 38/116 (32.76%), Postives = 53/116 (45.69%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 38/109 (34.86%), Postives = 52/109 (47.71%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy TrEMBL
Match: A0A5D3CCG8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001520 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65 Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy TrEMBL
Match: A0A5A7TZ46 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001640 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65 Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.7e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.7e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Cmc01g0013441 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.7e-62 Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|