Cmc01g0013131 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0013131
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L21
LocationCMiso1.1chr01: 9683285 .. 9688463 (-)
RNA-Seq ExpressionCmc01g0013131
SyntenyCmc01g0013131
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCTAAAACAAACGCGCACACACACACACAACACAAGACCTTCAGCAGGTCTCTCTAATGGCGTCTCTTACTCTTTCCCTCTGCGCCAATTTCTCTCTTCAATGCCGACTCTCCACCAACCATAGTCTACCTTTATCCACCCCGTTTCCCTCTTCTAGTTCCAACCATCATTTCCCCCTTTCCACTTCATCATCTTCCCTCAAGCTCTCTTCTTCCCGCTCTGCATTCTCCTTCCTCCTCAACTCCTCCGACTCTGAAACCGCCGTAATCGACTCTGACCCTGACGCTTCTCAAGCCCTTGAAATCCCCTCCCAACAGACCCCCAACCGCGAGGAAATCTTTGCGGTTGTTATGGTTAGTGTTTAATTTCACTGCTTTCCTTCTGTATTTGGCTAAAATGCTGGACTTCGGTATTGCGGAGTCATCGTTTATAATATGCTTAATTCCATTGCTGCCTGTATGTGTGTGTATATGTGAATTTGTTTCCAAACAGATTGGATCCCGCCAATATATAGTCTTTCCAGGGCGTTATATTCATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGGTGGGTTTTCTTATTATTCCATTCGTTTTATATTTTGATTATTTGAGTTGCTTGCTGAATTATGTTATACTTATGGAGATCAGAGTATGCATGCTTTGTTTGAATTTTTAGGTAGCACTAACATACTGTGCTCAACAGTGACTTGCATTGTTGTTTCTCTTTATGTACTTGGCAACTTCTTTCCGAATAGTTACCTAAGAAGTAAAAAAGTGATAGAGTTTTAGAAATTGATTGGGAGACTTTAGAGTTTAGATATTATTCGAGTAAAAGTGCCATCGTCTGTTCTCATGGTTACTCTTGTCAAAGTAATTGAGTTTCCATTTTTCATTTTGGTATTAATTCGTTTGGCGGTCTTCCTAAGTTAGAACCATCAGACAATATTAATATAATTTTTTTTAGAAAACTGCGGTTGGAATTTAAAAGAGAATAATGATTAGAGTCTGAAAACAAGAGATATAGAACAACTCTGTTATGGTATCTTTCTACTTTATACTAATTACTTGTACCATTATGGATATGTCTCCATCACCAAGGTCGGCCACTGTTGGATAAATTTAGGTCTTTTATGGTCCTAAGCTTGCTTTTGCTAGTGAAAATTGGTTTCAACACAAAATTTAATATAGAGCTTGCGTATCTAGCATGCTTAAATAGATTTTAGATATTTTGAGCAATATGCCTATTATCAAACATTTGACTTATCCAAGAGGGGTTTGAGATCTGGATGTCTCGACCAACTGCATAAAAGTGATGGCTTGAGAATTTGAAGGTGTGCGTGCGTCTGCTTTATATTATTTTGTGAATGATGTTGCTGCTTGGCTTAGCATGCTATTCAATAGGACATCAAGGGGAAAAAGTGTAAGTTGGCAAGAACATATCCTGTGGAAAGATACTTGGGTATGAACCTCTTCCTAGAAAATTCCCCCTTGATCTTCGATCTTCGATCTTTCTCTAAAAATGGATGGGGCTCCGGCATTGCGAAAGAATTTTGGAATTCAAATGTTGGATCCTGGAATTTGAGGTTTAGAACAAGCTAGAGAGATGCGGAAATTGAAGAATATCGAGCCCATCTACACTGCCTCTTTATAACATAATTTGAACATAAAGTCGAGTTCTTTCTCTGAGAGCTCTCACACAAGGCTATAAATACTTAAGATAAGCTCCAGTTTTCTGAGAATGGCCCATATGATTTTGTCTTCACATTGTTGTACACTCTACCATTAACAACTTTCTGAATCACAGAATCATCTTTTACTATCACGTGTTTTTGCAAAGACCAATTGGAACTATCTCTTCTCATCCTTCAACTGGCAAACAGTTCTCCCTTAAGACCCAAGGCGTTCACGCCTTAGGAGAGAGCCTTCTGCGGGCTCATTGGGCTAGAAAGAAATACAAGAGTCTTCCAAGATAAGGATTTCTCTTACTCTAGATTTTTTTGTCCTATAGTTAACCCAGTTGTGATTCGGTGTAAATGCTCCCTCCTTCATCACTATAGCTTTTCCATCCTCCTTTCTAATGGTAGGGATCTTTTGTAGCTCTCCCTTTTGAGATCTCCCTTTTGAGATTTTCCTCTCTTGTAGTTTCATACAATCGTGAAATTGTTTCTCATCCATACAAATAAAAGTAAAATAATAAAAAGAGAATAAATTAGAACTAGTGAATGTTGTTAAGTTTGGTAGAAATTTTGAGAATTGAGATAATTTAGATAAGTCATTCATGAGTAGTGGTGCTAGAGCTTGGTCTTGGGGCAGTGTCTTAAGTCAAAACAATTTGACAGGAGTGTCTTTACAGCCTAATTTTCTTTTCCTTTATATTTCATCAAATAATAATAATAACAACAATAATGTATTATTATGAAAAAAAAATAAATAAAAAAAAAACCTTTAGAAGAAGATGGGTTCCTTTTATATGATTCTGTTACAGATTTCATGAATCATGGGTGTTTTTCAGTTTTCTTTCAATTAGTTCTTTATGATCAATTGACTATGAATCTCAACACTTATCTCTTATTCTTTTTGATACAAAGAGTTTGTCTTTTCTCTTACTCCATCGATTTTTGCACGTTCGTTCATTGACTCTCAAGTCATCCAACCATCCTTGTGATTTTCCTTAGCTCATCTGTTGATCCTTTATTTATTTTTGCCAACATGAGTATAACTCTACTGGCTTGTACCGAACTAAGGTTTGATCCCCCACCACACATATTTGTTGATCTTTTTCTATCTCCTGGTCTTCATTTCTTCATGGAGGCTAAAATCTCATAGAAACTTTGGTTTTTTCCTAGTGTCCAAAGTTGTTAAGTGTATGGTTTTGAGACCCTGCTTGTGTATGTCATACAATAAGGTTAGCCTAAGATTTGGATTGTGTTCTATGAAGGTGTCACTCCACGATAAAAGTTTGGAATATGTTTCTTGAGAAAATTTTGCATTGGTTTGGTTTCTTAAGACTTTATTGCTATATAATAAGGGAACGTGCTCGCTAATCCTCCTTTGCGTAGCATAAAAGTGGGTGGGTTTCTTTGATAGCAGGAGGTCGTGTTTTTCTTTGGGTATTTCACTACAATTTTACAGTTTTTTGGGGGGTACTTGGCTTGTTTTTCTTTTTCTATTCTTAAAAGAGACAGATTCATTTAATAGAGAAATTAAGAATAAGATATATTACAAGTTATTGTTCAAAGCACTTTAATGGGGAAAAATAATGTTTTCTGGGTAATTACTAAAGGAGTTGGAAAGAATACACTCCAATATGGAACTGAAGAAACTGCCCTATTCTAAAAAGTACCTGTAGAAAGTTCGATCTCCTGAAAATTATTATATTTCTACCTAACTACATCCTTTTTTTTAAAGTACAACTTGGGGGTAAGGGGAATTGAACCTGGGGCCTCTTGTCCTTGGAAATATACATGTGTCAGTTAAGCTAAGCTCATATTGGCAACCTAACTACATCTTGAATAGTCTTCACCGCATTGTTATCAAATTCTGCTTTACCCCTTTTAGCAAAGTCCCTCAAAGGTGTCCTATAGTTTCTTTGATGTTCTTTGGGAGGCACCAGCGGATGTTAAAGATTTGGAATAAAACATTGGACATTTTGCCGGTTGGAAGTAGATTCGCAACTGAGGAAGGGATGATCACAAATTCACAACAATTTCATATTTCTTTTTGCATAAAATGTATCAATTGAGAAATAAGTAAATGCTATAACGTGACCTTTTTACTTTGCCATTAATATTGGTTCCTTCCATTGTGATCAAAGGCAGAACATGTTAACGATGTTTTTCTAATTCAGCTTCGAGGGAGATTTTCCTATATATTTTTTTCATAACAGAGTTTACTGTCGATCCAGCTGCTAGAGAAAGGTCGTGAAGTTATTAATATTTTCGCATCTTCCATCCTCTTTTTTTAAATAGCATTTTCTTGGTGGCAATGGGGAGTAATCCATTCTTCTATGTCACCTTTCAGGAGATTTCTTCTGAATTTCACTTTTAAGAGCTTGAACAAGCAATGTATCAAAAGAAGAAATGAGCTTTAGAAATTTGACGAGATTATGGTACCTTATCTATTGACCAAAATTTATGTGAAAGCCTGCACATACGCATTTACCTAAGTTGTGAATATTGATTTAGGTTGTAGTGTTTAGATTCAGCATTGATTAGCTTGATGACTAACGATCATCAGGCTTATTGCGTAGTAGCAGATCTTGTCTCATCTAATGTATGTGCAATTCATTTTGTAATACGGTGATTGTCTTAAATTTTTCTAATTTTTTTTTTTTTTGTGCAGATAACTCTGAACAAGGTTTTGCTCGTGGGAACAAAAACTCAGACATACATTGGAAAACCAGTAGTTACAAATGCCGCCGTTCATGCTGTTGTTGAGGAGCAGGTAATGCATCAAATTCGTTATCATCCCTTCATCAGAATAGAAAGAGGAAGAAGACCAAAGGAATAGAACAATGCTTCTTTTTTGCTTGGATTGTCTTCTTGTTTTTGTTTCTCTCCCTAAGTGGTCATTTGTTTCTCTTAATCAGGGATTAGATGACAAGGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGACGAAACATTGGGCACCGTCAGGTATTTTTCGGTCTTAGCCGCTCACTTCTCACTACCATTGTTTTACCACACAAATTTGCAGTATGTTGGGATTAGCCTTCATACCTCTCTCTCCCTGATGTGCATAAGTTTAGGAAAATTATTTGAATCCACGTTTGTCTATGTAGTTTCTAAACCTCCTCTTTTTTTGGAATATGTTTCTTCATCTGTTTTTACCCATATGATGCAGCCCAATACGCGAATTAGGATAACTGAAATCTCTGGATATCAAGATTACCCAGCAACCACGCTCGAGTCGTAGGAACAAATTCCGATGCTTTGAAGTTCCCTATTTCTTGCTCAAAATTCCCCTTTTTTGTATGTAAGTTCTTGTGATTTAAAATGTTTCAGTTGAGTTGTTTCTATCTGATAATGAATCTCAGAAGATCCTCCGGTGACCATTATGTCAAAATTTGAAGGAAATATATTGCTAATATGGAGTCCTAGGAATGTACTAATTTGTAGCTTAATATTAAAGGGTATCCAAA

mRNA sequence

TGGCTAAAACAAACGCGCACACACACACACAACACAAGACCTTCAGCAGGTCTCTCTAATGGCGTCTCTTACTCTTTCCCTCTGCGCCAATTTCTCTCTTCAATGCCGACTCTCCACCAACCATAGTCTACCTTTATCCACCCCGTTTCCCTCTTCTAGTTCCAACCATCATTTCCCCCTTTCCACTTCATCATCTTCCCTCAAGCTCTCTTCTTCCCGCTCTGCATTCTCCTTCCTCCTCAACTCCTCCGACTCTGAAACCGCCGTAATCGACTCTGACCCTGACGCTTCTCAAGCCCTTGAAATCCCCTCCCAACAGACCCCCAACCGCGAGGAAATCTTTGCGGTTGTTATGATTGGATCCCGCCAATATATAGTCTTTCCAGGGCGTTATATTCATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGATAACTCTGAACAAGGTTTTGCTCGTGGGAACAAAAACTCAGACATACATTGGAAAACCAGTAGTTACAAATGCCGCCGTTCATGCTGTTGTTGAGGAGCAGGGATTAGATGACAAGGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGACGAAACATTGGGCACCGTCAGCCCAATACGCGAATTAGGATAACTGAAATCTCTGGATATCAAGATTACCCAGCAACCACGCTCGAGTCGTAGGAACAAATTCCGATGCTTTGAAGTTCCCTATTTCTTGCTCAAAATTCCCCTTTTTTGTATGTAAGTTCTTGTGATTTAAAATGTTTCAGTTGAGTTGTTTCTATCTGATAATGAATCTCAGAAGATCCTCCGGTGACCATTATGTCAAAATTTGAAGGAAATATATTGCTAATATGGAGTCCTAGGAATGTACTAATTTGTAGCTTAATATTAAAGGGTATCCAAA

Coding sequence (CDS)

ATGGCGTCTCTTACTCTTTCCCTCTGCGCCAATTTCTCTCTTCAATGCCGACTCTCCACCAACCATAGTCTACCTTTATCCACCCCGTTTCCCTCTTCTAGTTCCAACCATCATTTCCCCCTTTCCACTTCATCATCTTCCCTCAAGCTCTCTTCTTCCCGCTCTGCATTCTCCTTCCTCCTCAACTCCTCCGACTCTGAAACCGCCGTAATCGACTCTGACCCTGACGCTTCTCAAGCCCTTGAAATCCCCTCCCAACAGACCCCCAACCGCGAGGAAATCTTTGCGGTTGTTATGATTGGATCCCGCCAATATATAGTCTTTCCAGGGCGTTATATTCATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGATAACTCTGAACAAGGTTTTGCTCGTGGGAACAAAAACTCAGACATACATTGGAAAACCAGTAGTTACAAATGCCGCCGTTCATGCTGTTGTTGAGGAGCAGGGATTAGATGACAAGGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGACGAAACATTGGGCACCGTCAGCCCAATACGCGAATTAGGATAACTGAAATCTCTGGATATCAAGATTACCCAGCAACCACGCTCGAGTCGTAG

Protein sequence

MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES
Homology
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BLAST of Cmc01g0013131 vs. NCBI nr
Match: XP_008461961.1 (PREDICTED: 50S ribosomal protein L21, chloroplastic [Cucumis melo] >KAA0048736.1 50S ribosomal protein L21 [Cucumis melo var. makuwa] >TYK31599.1 50S ribosomal protein L21 [Cucumis melo var. makuwa])

HSP 1 Score: 393.3 bits (1009), Expect = 1.3e-105
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60
           MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL
Sbjct: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60

Query: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120
           LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG
Sbjct: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120

Query: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180
           ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN
Sbjct: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180

Query: 181 IGHRQPNTRIRITEISGYQDYPATTLES 209
           IGHRQPNTRIRITEISGYQDYPATTLES
Sbjct: 181 IGHRQPNTRIRITEISGYQDYPATTLES 208

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BLAST of Cmc01g0013131 vs. NCBI nr
Match: XP_004149413.1 (50S ribosomal protein L21, chloroplastic [Cucumis sativus] >KAE8646150.1 hypothetical protein Csa_015984 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 5.0e-97
Identity = 195/208 (93.75%), Postives = 200/208 (96.15%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60
           MASLTLSLCANFSLQCRLSTNH+LPLSTPFPSS+SNHHFPLSTS SSLKLSSSR +FSFL
Sbjct: 1   MASLTLSLCANFSLQCRLSTNHNLPLSTPFPSSNSNHHFPLSTSPSSLKLSSSRPSFSFL 60

Query: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120
           LNSSDSETA+IDSDP  SQ LEIPS   PNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG
Sbjct: 61  LNSSDSETALIDSDPADSQTLEIPS--PPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120

Query: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180
           A+VNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN
Sbjct: 121 ADVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180

Query: 181 IGHRQPNTRIRITEISGYQDYPATTLES 209
           IGHRQPNTRIRITEISGYQDYPATTLES
Sbjct: 181 IGHRQPNTRIRITEISGYQDYPATTLES 206

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BLAST of Cmc01g0013131 vs. NCBI nr
Match: XP_038899803.1 (50S ribosomal protein L21, chloroplastic [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 6.2e-87
Identity = 181/212 (85.38%), Postives = 190/212 (89.62%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHH---FPLSTS-SSSLKLSSSRSA 60
           MASLTLSLCANFS  CR+ST H+LP STP   S+S+HH   F LS+S SSS  + SSR A
Sbjct: 1   MASLTLSLCANFSTHCRISTKHNLPSSTPIFPSNSHHHSFNFELSSSFSSSFSIPSSRPA 60

Query: 61  FSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQ 120
           FSFLL SS+SE AVIDS+P ASQ LEIPS+Q P REEIFAVVMIGSRQYIVFPGRYIHTQ
Sbjct: 61  FSFLLKSSESEAAVIDSEPAASQTLEIPSEQAPKREEIFAVVMIGSRQYIVFPGRYIHTQ 120

Query: 121 RLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKN 180
           RLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKN
Sbjct: 121 RLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKN 180

Query: 181 YRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           YRRNIGHRQPNTRIRITEISGYQDYPATTLES
Sbjct: 181 YRRNIGHRQPNTRIRITEISGYQDYPATTLES 212

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BLAST of Cmc01g0013131 vs. NCBI nr
Match: KAG6607629.1 (50S ribosomal protein L21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037229.1 50S ribosomal protein L21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 3.3e-80
Identity = 170/216 (78.70%), Postives = 188/216 (87.04%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTP-FPSSS--SNHHFPLSTSSSSLKLS-----S 60
           MASLTL+LC++F+  CRLST H+ P STP FPS+S   + +F LSTSSSS KLS     S
Sbjct: 1   MASLTLTLCSHFASHCRLSTKHNFPSSTPNFPSNSHYDSFNFALSTSSSSRKLSSSSVTS 60

Query: 61  SRSAFSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRY 120
           S SA  FLL SS+SE AVI+S+P ASQ +E+PS++ P REEIFAVVMIGSRQYIVFPGRY
Sbjct: 61  SHSALPFLLKSSESEAAVIESEPAASQTVEVPSEEAPKREEIFAVVMIGSRQYIVFPGRY 120

Query: 121 IHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYK 180
           IHTQRLKGANVNDKITLNKVLLVGTKT+ YIGKP+VTNAAVHAVVEEQGLD KVIVFKYK
Sbjct: 121 IHTQRLKGANVNDKITLNKVLLVGTKTEAYIGKPIVTNAAVHAVVEEQGLDKKVIVFKYK 180

Query: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           KKKNYRRNIGHRQPNTRIRITEISGYQDYPA+TLES
Sbjct: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPASTLES 216

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BLAST of Cmc01g0013131 vs. NCBI nr
Match: XP_022926213.1 (50S ribosomal protein L21, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 170/216 (78.70%), Postives = 187/216 (86.57%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTP-FPSSS--SNHHFPLSTSSSSLKLS-----S 60
           MASLTLSLC++F+  CRLST  + P STP FPS+S   + +F LSTSSSS KLS     S
Sbjct: 1   MASLTLSLCSHFASHCRLSTKQNFPSSTPNFPSNSPYDSFNFALSTSSSSHKLSSSSVTS 60

Query: 61  SRSAFSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRY 120
           S SA  FLL SS+SE AVI+S+P ASQ +E+PS++ P REEIFAVVMIGSRQYIVFPGRY
Sbjct: 61  SHSALPFLLKSSESEAAVIESEPAASQTVEVPSEEAPKREEIFAVVMIGSRQYIVFPGRY 120

Query: 121 IHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYK 180
           IHTQRLKGANVNDKITLNKVLLVGTKT+ YIGKP+VTNAAVHAVVEEQGLD KVIVFKYK
Sbjct: 121 IHTQRLKGANVNDKITLNKVLLVGTKTEAYIGKPIVTNAAVHAVVEEQGLDKKVIVFKYK 180

Query: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           KKKNYRRNIGHRQPNTRIRITEISGYQDYPA+TLES
Sbjct: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPASTLES 216

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BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match: P51412 (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 116/210 (55.24%), Postives = 150/210 (71.43%), Query Frame = 0 

Query: 2   ASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFLL 61
           +S TLSLC+ FS  C +++  S  +       S N   PL+   S    S+SR+AF+   
Sbjct: 4   SSATLSLCSTFSAHCNVNSRRSSTILCSLSKPSLNLAKPLTGFLSPSTASTSRTAFTVAP 63

Query: 62  NSSDSETAVIDSDPDASQALEI-------PSQQTPNREEIFAVVMIGSRQYIVFPGRYIH 121
             ++S   V++++P+ +    +        +++   REEIFAV+M+G RQYIVFPGRY++
Sbjct: 64  KFAES---VVEAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLY 123

Query: 122 TQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKK 181
           TQRLK ANV+D+I LNKVLLVGTKT TYIGKPVVTNA VHAVVE QGL+DKV+VFKYK K
Sbjct: 124 TQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPK 183

Query: 182 KNYRRNIGHRQPNTRIRITEISGYQDYPAT 205
           K YRRNIGHRQPNTRIRIT I+GY++YPA+
Sbjct: 184 KKYRRNIGHRQPNTRIRITGITGYEEYPAS 210

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BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match: P24613 (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-47
Identity = 129/237 (54.43%), Postives = 150/237 (63.29%), Query Frame = 0 

Query: 1   MASLTL-----SLCANFSLQCRLS--TNHSLPLSTPF------PSSSSNHHFPLSTSSSS 60
           MAS TL     SLCA   L   L+    +  PLS PF      PS S     P++     
Sbjct: 1   MASATLAFSCSSLCATLKLPQNLNPLLLNVPPLSKPFSGVVSPPSLSRLSLLPVAAKRRR 60

Query: 61  LK--LSSSRSAFSFLLNSSDSETAVIDSDPDASQALE-------------IPSQ-QTPNR 120
            +      ++ F       + +  + D  PD  QA E             +P +   P R
Sbjct: 61  FQEIPEELKAEFEEFQRPPNQKPQLSDVLPDDFQAPEPGTPEYNDIINQFLPKKGPPPPR 120

Query: 121 EEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNA 180
           EEIFAVV+IGSRQYIV PGR+I+TQRLKGA VNDKI LNKVLLVGTK  TYIG P+VTNA
Sbjct: 121 EEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNA 180

Query: 181 AVHAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           AVHAVVEEQ LDDKVIVFKYKKKKNYRRNIGHRQP TRI+IT I+GY+DYPA+TLE+
Sbjct: 181 AVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTLEA 237

[Close]
BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match: Q8L9A0 (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL21M PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.8e-27
Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 0 

Query: 92  EEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNA 151
           E +FA+V IGS Q+ V  G  I T++LK  ++NDK+ L KVLL+G+ +QT IG+P++ +A
Sbjct: 138 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDA 197

Query: 152 AVHAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQ 200
            VHAVVEE  LD+KV++FK K++KNYRR  GHRQ  T++RIT+I G +
Sbjct: 198 TVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIE 245

[Close]
BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match: B8E0B4 (50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=rplU PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.3e-18
Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 0 

Query: 94  IFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAV 153
           +F VV  G +QY V  G  ++ ++LK ANV D++ L+KVLLVG + +  IG+P V  A V
Sbjct: 1   MFVVVETGGKQYKVSVGSMVNVEKLK-ANVGDEVVLDKVLLVGKEDEVIIGQPYVEGAKV 60

Query: 154 HAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEI 196
            A V  Q    KVIVFK+K+KK+YRR  GHRQP T++ I EI
Sbjct: 61  IAKVVRQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSIKEI 101

[Close]
BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match: A0LPF7 (50S ribosomal protein L21 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rplU PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 0 

Query: 94  IFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAV 153
           ++AV+  G RQY V PG+ +  ++L G  V DK+TL++VLL    T   +G+PV+ N AV
Sbjct: 1   MYAVLKSGGRQYEVRPGQVVKVEKLLG-EVGDKVTLDQVLLFSDGTDIQVGQPVLANIAV 60

Query: 154 HAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEI 196
              + EQG   K+++FK+K++K+YR+  GHRQ  T +R+ EI
Sbjct: 61  QGQIVEQGRHRKIVIFKHKRRKDYRKKQGHRQHYTAVRVEEI 101

[Close]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match: A0A5A7U3C6 (50S ribosomal protein L21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G001040 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.4e-106
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60
           MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL
Sbjct: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60

Query: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120
           LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG
Sbjct: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120

Query: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180
           ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN
Sbjct: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180

Query: 181 IGHRQPNTRIRITEISGYQDYPATTLES 209
           IGHRQPNTRIRITEISGYQDYPATTLES
Sbjct: 181 IGHRQPNTRIRITEISGYQDYPATTLES 208

[Close]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match: A0A1S3CFS1 (50S ribosomal protein L21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500436 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.4e-106
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60
           MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL
Sbjct: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFL 60

Query: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120
           LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG
Sbjct: 61  LNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLKG 120

Query: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180
           ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN
Sbjct: 121 ANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRRN 180

Query: 181 IGHRQPNTRIRITEISGYQDYPATTLES 209
           IGHRQPNTRIRITEISGYQDYPATTLES
Sbjct: 181 IGHRQPNTRIRITEISGYQDYPATTLES 208

[Close]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match: A0A6J1EHE5 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433392 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 170/216 (78.70%), Postives = 187/216 (86.57%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTP-FPSSS--SNHHFPLSTSSSSLKLS-----S 60
           MASLTLSLC++F+  CRLST  + P STP FPS+S   + +F LSTSSSS KLS     S
Sbjct: 1   MASLTLSLCSHFASHCRLSTKQNFPSSTPNFPSNSPYDSFNFALSTSSSSHKLSSSSVTS 60

Query: 61  SRSAFSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRY 120
           S SA  FLL SS+SE AVI+S+P ASQ +E+PS++ P REEIFAVVMIGSRQYIVFPGRY
Sbjct: 61  SHSALPFLLKSSESEAAVIESEPAASQTVEVPSEEAPKREEIFAVVMIGSRQYIVFPGRY 120

Query: 121 IHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYK 180
           IHTQRLKGANVNDKITLNKVLLVGTKT+ YIGKP+VTNAAVHAVVEEQGLD KVIVFKYK
Sbjct: 121 IHTQRLKGANVNDKITLNKVLLVGTKTEAYIGKPIVTNAAVHAVVEEQGLDKKVIVFKYK 180

Query: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           KKKNYRRNIGHRQPNTRIRITEISGYQDYPA+TLES
Sbjct: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPASTLES 216

[Close]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match: A0A6J1CPA7 (50S ribosomal protein L21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013483 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79
Identity = 164/209 (78.47%), Postives = 180/209 (86.12%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTP-FPSSSSNHHFPLSTSSSSLKLSSSRSAFSF 60
           MASLTLSLCA F+  CR+S+  +LP STP FPS+S +  F L+ S SS    SSR+   F
Sbjct: 1   MASLTLSLCATFATHCRISSKQNLPSSTPIFPSNSHHDSFNLALSCSSSSHPSSRAPLPF 60

Query: 61  LLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRYIHTQRLK 120
           +L SS+SE AVI+S+P ASQ +E+P +Q P REEIFAVVMIGSRQYIVFPGRYIHTQRLK
Sbjct: 61  VLRSSESEAAVIESEPAASQIVEVPPEQAPKREEIFAVVMIGSRQYIVFPGRYIHTQRLK 120

Query: 121 GANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKKNYRR 180
           GANVNDKITLNKVLLVGTKT TYIGKPVVTNAAVHA+VEEQGLDDKVIVFKYKKKKNYRR
Sbjct: 121 GANVNDKITLNKVLLVGTKTHTYIGKPVVTNAAVHAIVEEQGLDDKVIVFKYKKKKNYRR 180

Query: 181 NIGHRQPNTRIRITEISGYQDYPATTLES 209
           NIGHRQPNTRIRITEISGYQDYPA TLES
Sbjct: 181 NIGHRQPNTRIRITEISGYQDYPAATLES 209

[Close]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match: A0A6J1IX10 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480675 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.5e-78
Identity = 168/216 (77.78%), Postives = 186/216 (86.11%), Query Frame = 0 

Query: 1   MASLTLSLCANFSLQCRLSTNHSLPLSTP-FPSSS--SNHHFPLSTSSSSLKLS-----S 60
           MASLTLSLC++F+  CR+ST  + P STP FPS+S   + +F LSTSSSS KLS     S
Sbjct: 1   MASLTLSLCSHFASHCRVSTKQNFPSSTPNFPSNSHYDSFNFALSTSSSSHKLSSSSVTS 60

Query: 61  SRSAFSFLLNSSDSETAVIDSDPDASQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRY 120
           S SA  FLL SS+SE AVI+S+  ASQ +E+PS++ P REEIFAVVMIGSRQYIVFPGRY
Sbjct: 61  SHSALPFLLKSSESEAAVIESELAASQTVEVPSEEAPKREEIFAVVMIGSRQYIVFPGRY 120

Query: 121 IHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYK 180
           IHTQRLKGANVNDKITLNKVLLVGTKT+ YIGKP+VTNAAVHAVVEEQGLD KVIVFKYK
Sbjct: 121 IHTQRLKGANVNDKITLNKVLLVGTKTEAYIGKPIVTNAAVHAVVEEQGLDKKVIVFKYK 180

Query: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPATTLES 209
           KKKNYRRNIGHRQPNTRIRITEISGYQDYPA+TLES
Sbjct: 181 KKKNYRRNIGHRQPNTRIRITEISGYQDYPASTLES 216

[Close]
BLAST of Cmc01g0013131 vs. TAIR 10
Match: AT1G35680.1 (Ribosomal protein L21 )

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53
Identity = 116/210 (55.24%), Postives = 150/210 (71.43%), Query Frame = 0 

Query: 2   ASLTLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFLL 61
           +S TLSLC+ FS  C +++  S  +       S N   PL+   S    S+SR+AF+   
Sbjct: 4   SSATLSLCSTFSAHCNVNSRRSSTILCSLSKPSLNLAKPLTGFLSPSTASTSRTAFTVAP 63

Query: 62  NSSDSETAVIDSDPDASQALEI-------PSQQTPNREEIFAVVMIGSRQYIVFPGRYIH 121
             ++S   V++++P+ +    +        +++   REEIFAV+M+G RQYIVFPGRY++
Sbjct: 64  KFAES---VVEAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLY 123

Query: 122 TQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKK 181
           TQRLK ANV+D+I LNKVLLVGTKT TYIGKPVVTNA VHAVVE QGL+DKV+VFKYK K
Sbjct: 124 TQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPK 183

Query: 182 KNYRRNIGHRQPNTRIRITEISGYQDYPAT 205
           K YRRNIGHRQPNTRIRIT I+GY++YPA+
Sbjct: 184 KKYRRNIGHRQPNTRIRITGITGYEEYPAS 210

[Close]
BLAST of Cmc01g0013131 vs. TAIR 10
Match: AT4G30930.1 (Ribosomal protein L21 )

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28
Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 0 

Query: 92  EEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTQTYIGKPVVTNA 151
           E +FA+V IGS Q+ V  G  I T++LK  ++NDK+ L KVLL+G+ +QT IG+P++ +A
Sbjct: 138 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDA 197

Query: 152 AVHAVVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQ 200
            VHAVVEE  LD+KV++FK K++KNYRR  GHRQ  T++RIT+I G +
Sbjct: 198 TVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIE 245

The following BLAST results are available for this feature:
BLAST of Cmc01g0013131 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461961.11.3e-105100.00PREDICTED: 50S ribosomal protein L21, chloroplastic [Cucumis melo] >KAA0048736.1... [more]
XP_004149413.15.0e-9793.7550S ribosomal protein L21, chloroplastic [Cucumis sativus] >KAE8646150.1 hypothe... [more]
XP_038899803.16.2e-8785.3850S ribosomal protein L21, chloroplastic [Benincasa hispida][more]
KAG6607629.13.3e-8078.7050S ribosomal protein L21, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
XP_022926213.11.6e-7978.7050S ribosomal protein L21, chloroplastic-like [Cucurbita moschata][more]
BLAST of Cmc01g0013131 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514121.8e-5255.2450S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL2... [more]
P246132.2e-4754.4350S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 P... [more]
Q8L9A09.8e-2753.7050S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL2... [more]
B8E0B46.3e-1850.0050S ribosomal protein L21 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX... [more]
A0LPF74.1e-1743.1450S ribosomal protein L21 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MP... [more]
BLAST of Cmc01g0013131 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3C66.4e-106100.0050S ribosomal protein L21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CFS16.4e-106100.0050S ribosomal protein L21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500436... [more]
A0A6J1EHE57.9e-8078.7050S ribosomal protein L21, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1CPA72.3e-7978.4750S ribosomal protein L21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1IX102.5e-7877.7850S ribosomal protein L21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
BLAST of Cmc01g0013131 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G35680.11.3e-5355.24Ribosomal protein L21 [more]
AT4G30930.16.9e-2853.70Ribosomal protein L21 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001787Ribosomal protein L21TIGRFAMTIGR00061TIGR00061coord: 95..196
e-value: 4.2E-27
score: 92.5
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 94..197
score: 22.473799
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 95..195
e-value: 2.4E-31
score: 107.9
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 1..207
NoneNo IPR availablePANTHERPTHR21349:SF250S RIBOSOMAL PROTEIN L21, CHLOROPLASTICcoord: 1..207
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 166..188
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 94..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0013131.1Cmc01g0013131.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding