Cmc01g0012731 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAAGAAAACCCAAGAGTTGTGGATATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAGATTCCTACTCTTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCGTCCAAAAGGAAGTCCCCCCCTCCACCACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCCACGACCAAGAAAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAGTCACCACCTCCACCACCACCAAGAAAGCGTGATAACAAGTCACCTCCACCACCGCCACCAAAGAAACACGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTTCACCACGATCCCCTCACAATTAATTAGGTCAATATAAGGAATTCTCATCGACTATAAACCAAAAGAAGGTGATATATTAAATAATACACAACTCAATCCATTACTCAAACATATGCGTACATCTCAACATGCAATATCTTACGTGAAGTTTTATGTTTCTTTTGCAGGAAAAAGAATAAAGAAGTGAAGAAGTATGTATTTAGGTCAACTAAAGAAAACAACTTAAAAGTGTAAAAAAGAAGGTTGTTTTCATCTATTTGCTATACCTATGATTCTACGTGTTTTCTACGTGTGTCTTTAGTATTCCGTTGATTAAATAAAAGTCCATCTTACTTTCGTGTGTTTCCTAGGGAAAAAAAGAATCAGCTCTTCTTATTCTTATGCGACACATGAAATATTAAATAGA AATTAAGAAAACCCAAGAGTTGTGGATATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAGATTCCTACTCTTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCGTCCAAAAGGAAGTCCCCCCCTCCACCACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCCACGACCAAGAAAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAGTCACCACCTCCACCACCACCAAGAAAGCGTGATAACAAGTCACCTCCACCACCGCCACCAAAGAAACACGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTTCACCACGATCCCCTCACAATTAATTAGGTCAATATAAGGAATTCTCATCGACTATAAACCAAAAGAAGGAAAAAGAATAAAGAAGTGAAGAAGTATGTATTTAGGTCAACTAAAGAAAACAACTTAAAAGTGTAAAAAAGAAGGTTGTTTTCATCTATTTGCTATACCTATGATTCTACGTGTTTTCTACGTGTGTCTTTAGTATTCCGTTGATTAAATAAAAGTCCATCTTACTTTCGTGTGTTTCCTAGGGAAAAAAAGAATCAGCTCTTCTTATTCTTATGCGACACATGAAATATTAAATAGA ATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAGATTCCTACTCTTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCGTCCAAAAGGAAGTCCCCCCCTCCACCACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCCACGACCAAGAAAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAGTCACCACCTCCACCACCACCAAGAAAGCGTGATAACAAGTCACCTCCACCACCGCCACCAAAGAAACACGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTTCACCACGATCCCCTCACAATTAATTAG MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKKHDNKSPPPPPPKEKTPPRPRKSPPPPPPRKHDNKSPPPPPPRKRDNKSPPPPPPKKHEYDSYPPPPPPRKHKDKSPLHHDPLTIN Homology
BLAST of Cmc01g0012731 vs. NCBI nr
Match: KAA0068050.1 (hypothetical protein E6C27_scaffold4741G00020 [Cucumis melo var. makuwa] >TYK31538.1 hypothetical protein E5676_scaffold172G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 304.7 bits (779), Expect = 5.2e-79 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of Cmc01g0012731 vs. NCBI nr
Match: XP_011659754.2 (extensin-3-like [Cucumis sativus] >KAE8646189.1 hypothetical protein Csa_016540 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35 Identity = 127/209 (60.77%), Postives = 144/209 (68.90%), Query Frame = 0
BLAST of Cmc01g0012731 vs. NCBI nr
Match: XP_021978126.2 (extensin-3 [Helianthus annuus] >KAF5796234.1 putative Extensin domain-containing protein [Helianthus annuus]) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12 Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 0
BLAST of Cmc01g0012731 vs. NCBI nr
Match: XP_022039692.1 (extensin-3-like [Helianthus annuus] >KAF5807649.1 hypothetical protein HanXRQr2_Chr05g0235981 [Helianthus annuus]) HSP 1 Score: 81.6 bits (200), Expect = 7.2e-12 Identity = 97/180 (53.89%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of Cmc01g0012731 vs. NCBI nr
Match: BBN11654.1 (hypothetical protein Mp_5g13720 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 79.7 bits (195), Expect = 2.7e-11 Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy Swiss-Prot
Match: Q9FLQ7 (Formin-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=FH20 PE=2 SV=3) HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04 Identity = 61/122 (50.00%), Postives = 65/122 (53.28%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy TrEMBL
Match: A0A5A7VLF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00210 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.5e-79 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy TrEMBL
Match: A0A251U7B1 (Putative extensin 3 OS=Helianthus annuus OX=4232 GN=ATEXT3 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 5.4e-13 Identity = 91/172 (52.91%), Postives = 110/172 (63.95%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy TrEMBL
Match: A0A5J5BV08 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002715 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.9e-11 Identity = 87/147 (59.18%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy TrEMBL
Match: A0A7I8L3Z0 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_11015308 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 84/137 (61.31%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of Cmc01g0012731 vs. ExPASy TrEMBL
Match: A0A6J1FDF6 (extensin-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443007 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-10 Identity = 92/185 (49.73%), Postives = 108/185 (58.38%), Query Frame = 0
BLAST of Cmc01g0012731 vs. TAIR 10
Match: AT5G07740.1 (actin binding ) HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05 Identity = 61/122 (50.00%), Postives = 65/122 (53.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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