Cmc01g0012551 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCTTTCTTGCTTTCTCAATCTCATCACTTTCTCCCCTCTCTTCTCTGATCAGTCGCCAACGCGTGTGAACTCGTCGCCGTGCTATCATCGGAGGCAGCTTCTTCCGTTGCCGCATCGCGCTCGTGCCCGCTGGAAACCCTTTAAACAACAAATGGAGATGAAGAACGAGTCGATTGAGCTGGGCAGTGGATCTGATCGGTTTGCAAGAAGGGGTTGGGCGGCGGTGTCTGAAGAACGGGGAGGCGAAGGTCTGGTAGATTTTGAGCGATTGGATCTGATTTTTGTTGAAATCGATCGAGAATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGGCAAGATTTTGTATCTCTTCTTTATTAGATCCTTAAAACTGATTTATCTTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCAGCTTATATTACTCTTTAGGGAAATTTTGTTTCCATTAATATTTGTTCTGTTTTTTAATGATTGGAACCTTGAGAAGGGTTTACGTTTATTTCTTTGCTGAAAGAATCTATGGAATGTTGCTCGAAGGGCCAACAAACATTATGGGAATTTTGGAAGCCTAAATTTGCTTGTGCTTCAGCTCAAATAGTTTTGCTTTTGGTGTGCATTATAGTTGCCTTTTTCCATTCAGAATTTGTGATGCTTTGTGGTTCTGTATTATTAGAGAATAATAATACAGGTTATTTGTATTATCAAGGTTAAATTTGTCTTCTCCCCTTTCTCTCTTCTTTGCATAATTTTCTTTTTTCTTTTGGTTGTTGTTAAAAGTTGGTGTCTTTTATTAGAGAATACACCACCCCCCTCGTAAAAGTTGGTAAAAAGTATTGTTTATTAACGTACCCATTCATAATAGAAATTCTGTCATATTCCAACAATATTAAGTTAATATTTCTAAAGTAGATAATATGATATTATTCACGACCACGACCACATACAGTTCTGATAGGTCCCACATGCATGTTTTTGTTGCAGACATTGTCAGAAGGCTTTGCTATGATTGGTCGTCCAGGCAAGGTTAGATATTTTCAAATTTTTACTTGTTTAAGTTATGATTCTTAGTAATTTTGTATATAATCTTATTTTGGAAAGTAACCAAGGATATGTTTTGGGAATGATTCTAAAATAGTCAAAATCACTCTTAAACATGTTTCTTATCATCTAAAACTAATTTTATTAATTTGTATGATCGATTTGAATATATAAAAAAAGATTAATAATTTCAAAACCAGTCTCACAAACATGCACTGTTAGGAACCAGAAACTTATAGCTTGCCCATTTGTTGCTTATGTTATTTGCAGGGTTCTATCTATAAGCCATCAAAGCTTCCACCTGCTCCACTAGATTATAATCGGACTTTTTTCAAAATTTATTGTTATAAGTTCATTATATTTCATGACTTGAAGTGGATATTTTATGGTTCTCTTCCCTTGAACAATATTTTAAATCTCTATGTTTCTCTCATCTCACAGGGTTCTCCTTTTTGCAAACTTGTTCGTGAAGTGCTTGTAGAGTTGGAGTTACCACATTTAGTACGTTGGTAAAGTCTCTTATACCGTTCATTTTTCAAGGCACACTATTATTAATTACATACACTCACTTATTAATATCGTCTAGGATCTTTGCATATAAATCTTTGTCAATATGGCAATGGCCTTTTAGGTGGTGTAAGCGGTAGAAGGAAAAAAGATTACTAAGTGTGAATATTGAGTATTAGTAAGAAAATATTGGGACTGATATTTTGATATTTTGATATTTCTACTAGCAACTAGGTCATAACATTGTTACTTATCAATTCAACCATCTTGATGTCTTTTACAGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCATACCCTCATCTTTGTGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTACTTTGCTATTAGTTGCAGTTTTAGTTATTGC TCCCTTTCTTGCTTTCTCAATCTCATCACTTTCTCCCCTCTCTTCTCTGATCAGTCGCCAACGCGTGTGAACTCGTCGCCGTGCTATCATCGGAGGCAGCTTCTTCCGTTGCCGCATCGCGCTCGTGCCCGCTGGAAACCCTTTAAACAACAAATGGAGATGAAGAACGAGTCGATTGAGCTGGGCAGTGGATCTGATCGGTTTGCAAGAAGGGGTTGGGCGGCGGTGTCTGAAGAACGGGGAGGCGAAGGTCTGGTAGATTTTGAGCGATTGGATCTGATTTTTGTTGAAATCGATCGAGAATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGACATTGTCAGAAGGCTTTGCTATGATTGGTCGTCCAGGCAAGGGTTCTCCTTTTTGCAAACTTGTTCGTGAAGTGCTTGTAGAGTTGGAGTTACCACATTTAGTACGTTGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCATACCCTCATCTTTGTGACAAGATCTTGAAGTTGGTCATTTGTGAAGCGTTCTACTTTGCTATTAGTTGCAGTTTTAGTTATTGC ATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGACATTGTCAGAAGGCTTTGCTATGATTGGTCGTCCAGGCAAGGGTTCTCCTTTTTGCAAACTTGTTCGTGAAGTGCTTGTAGAGTTGGAGTTACCACATTTAGTACGTTGGGAGTTATCACTAAACAAATGA MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYETLSEGFAMIGRPGKGSPFCKLVREVLVELELPHLVRWELSLNK Homology
BLAST of Cmc01g0012551 vs. NCBI nr
Match: XP_038898720.1 (dnaJ homolog subfamily B member 1 [Benincasa hispida]) HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24 Identity = 65/87 (74.71%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Cmc01g0012551 vs. NCBI nr
Match: XP_008466370.1 (PREDICTED: dnaJ homolog subfamily B member 4 [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 1.0e-23 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Cmc01g0012551 vs. NCBI nr
Match: KAA0038790.1 (dnaJ-like protein subfamily B member 4 [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23 Identity = 61/87 (70.11%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of Cmc01g0012551 vs. NCBI nr
Match: XP_004136336.1 (dnaJ homolog subfamily B member 1 [Cucumis sativus] >KGN60126.1 hypothetical protein Csa_001601 [Cucumis sativus]) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Cmc01g0012551 vs. NCBI nr
Match: XP_022136157.1 (dnaJ homolog subfamily B member 4 [Momordica charantia]) HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23 Identity = 63/87 (72.41%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy Swiss-Prot
Match: Q5XGU5 (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis OX=8355 GN=dnajb6-b PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17 Identity = 38/57 (66.67%), Postives = 52/57 (91.23%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy Swiss-Prot
Match: Q5FWN8 (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis OX=8355 GN=dnajb6-a PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 39/57 (68.42%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy Swiss-Prot
Match: O75190 (DnaJ homolog subfamily B member 6 OS=Homo sapiens OX=9606 GN=DNAJB6 PE=1 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 39/57 (68.42%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy Swiss-Prot
Match: Q4R7Y5 (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis OX=9541 GN=DNAJB6 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 39/57 (68.42%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy Swiss-Prot
Match: Q5R8H0 (DnaJ homolog subfamily B member 6 OS=Pongo abelii OX=9601 GN=DNAJB6 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.3e-17 Identity = 39/57 (68.42%), Postives = 50/57 (87.72%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy TrEMBL
Match: A0A1S3CR26 (dnaJ homolog subfamily B member 4 OS=Cucumis melo OX=3656 GN=LOC103503797 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.9e-24 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy TrEMBL
Match: A0A5A7T6C0 (DnaJ-like protein subfamily B member 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003450 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23 Identity = 61/87 (70.11%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy TrEMBL
Match: A0A0A0LJC9 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878950 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy TrEMBL
Match: A0A6J1C4S9 (dnaJ homolog subfamily B member 4 OS=Momordica charantia OX=3673 GN=LOC111007916 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23 Identity = 63/87 (72.41%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Cmc01g0012551 vs. ExPASy TrEMBL
Match: A0A6J1FQ10 (dnaJ homolog subfamily B member 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446207 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Cmc01g0012551 vs. TAIR 10
Match: AT1G10350.1 (DNAJ heat shock family protein ) HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24 Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Cmc01g0012551 vs. TAIR 10
Match: AT4G28480.1 (DNAJ heat shock family protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23 Identity = 48/59 (81.36%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Cmc01g0012551 vs. TAIR 10
Match: AT4G28480.2 (DNAJ heat shock family protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23 Identity = 48/59 (81.36%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Cmc01g0012551 vs. TAIR 10
Match: AT3G08910.1 (DNAJ heat shock family protein ) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Cmc01g0012551 vs. TAIR 10
Match: AT5G01390.1 (DNAJ heat shock family protein ) HSP 1 Score: 104.8 bits (260), Expect = 4.1e-23 Identity = 47/59 (79.66%), Postives = 56/59 (94.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|