Cmc01g0012351 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0012351
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr01: 8393258 .. 8394316 (+)
RNA-Seq Expression	Cmc01g0012351
Synteny	Cmc01g0012351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACATCCCAGGTAAAGTAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGTACATTCAGCAGCGCTGATCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGGAGTCTCAGTAGGAGAGGTTACCTCACAGTTTGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGAGCAAGGCGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTAAGGGGCGCCTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGATTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTTAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCTGGGTTGTTACAACCCTTGAGTGTTCCAGGATGGAAATGGGAAAGCGTGTCGATGGACTTCATCACGGGACTGCCCAAAACCCTAAAAGGCTATATAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGAAGTACCCGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGTTACCAGGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTAA

mRNA sequence

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACATCCCAGGTAAAGTAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGTACATTCAGCAGCGCTGATCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGGAGTCTCAGTAGGAGAGGTTACCTCACAGTTTGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGAGCAAGGCGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTAAGGGGCGCCTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGATTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTTAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCTGGGTTGTTACAACCCTTGAGTGTTCCAGGATGGAAATGGGAAAGCGTGTCGATGGACTTCATCACGGGACTGCCCAAAACCCTAAAAGGCTATATAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGAAGTACCCGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGTTACCAGGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTAA

Coding sequence (CDS)

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACATCCCAGGTAAAGTAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGTACATTCAGCAGCGCTGATCACCAAGCAAGCCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGGAGTCTCAGTAGGAGAGGTTACCTCACAGTTTGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGAGCAAGGCGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTAAGGGGCGCCTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGATTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTTAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCTGGGTTGTTACAACCCTTGAGTGTTCCAGGATGGAAATGGGAAAGCGTGTCGATGGACTTCATCACGGGACTGCCCAAAACCCTAAAAGGCTATATAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGAAGTACCCGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGTTACCAGGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTAA

Protein sequence

MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSVGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRLCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL

Homology

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BLAST of Cmc01g0012351 vs. NCBI nr
Match: KAA0040692.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 681.4 bits (1757), Expect = 4.1e-192
Identity = 332/352 (94.32%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
           MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60

Query: 61  VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
           VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VETEQGEDFSISSDDGLMF+GRL
Sbjct: 61  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRL 120

Query: 121 CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 180

Query: 181 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
           TYTASKWGQLYMTEIVRLH VPVSIISDRD  FTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDAHFTSKFWKGLQLALGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
           GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 352

[Close]

BLAST of Cmc01g0012351 vs. NCBI nr
Match: KAA0041490.1 (hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 680.2 bits (1754), Expect = 9.2e-192
Identity = 335/352 (95.17%), Postives = 338/352 (96.02%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            MR RRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQAPLLRDFERAEI VS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVTSQ AQLSVQPTLRQRIIVAQLNDPYLVEKRRLVET QGEDFSIS DDGLMF+GRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLYMTEIVRLH VPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            G+T+RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMA FEAL
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEAL 1080

[Close]

BLAST of Cmc01g0012351 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 2.7e-191
Identity = 331/352 (94.03%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
           MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
           VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGEDFSISSDDGLMF+GRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLKG+ VIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
           TYTASKWGQLYMTEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
           GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 608

[Close]

BLAST of Cmc01g0012351 vs. NCBI nr
Match: KAA0042912.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.0e-190
Identity = 329/352 (93.47%), Postives = 335/352 (95.17%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 836  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 895

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGEDFSISSDDGLMF+GRL
Sbjct: 896  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 955

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED+AVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 956  CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1015

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQPLSVPGWKWESVSM FITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 1016 KAPRQHPAGLLQPLSVPGWKWESVSMGFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1075

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLY+TEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 1076 TYTASKWGQLYITEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1135

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 1136 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1187

[Close]

BLAST of Cmc01g0012351 vs. NCBI nr
Match: KAA0066264.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.0e-190
Identity = 328/352 (93.18%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            +RQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 943  IRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1002

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVT++ AQLSVQPTLRQ+II AQLNDPYL EKRR+VETEQGEDFSISSDDGLMF+GRL
Sbjct: 1003 VGEVTAELAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRL 1062

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 1063 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1122

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQPLSVPGWKWE+VSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 1123 KAPRQHPAGLLQPLSVPGWKWENVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1182

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLYMTEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 1183 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1242

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            GQTERLNQILEDMLRACVLEFS SWDSHLHLMEF+YNNSYQATIGMAPFEAL
Sbjct: 1243 GQTERLNQILEDMLRACVLEFSESWDSHLHLMEFSYNNSYQATIGMAPFEAL 1294

[Close]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-47
Identity = 108/351 (30.77%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSV 61
            R  RW   ++D++ EI Y PG  N +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMF--KGR 121
                    Q+S+    + +++    ND  L+    L   ++  + +I   DGL+   K +
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQT 301
             + TA +  +++   ++     P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 351
            DGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

[Close]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-47
Identity = 108/351 (30.77%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSV 61
            R  RW   ++D++ EI Y PG  N +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMF--KGR 121
                    Q+S+    + +++    ND  L+    L   ++  + +I   DGL+   K +
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQT 301
             + TA +  +++   ++     P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 351
            DGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

[Close]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-47
Identity = 108/351 (30.77%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSV 61
            R  RW   ++D++ EI Y PG  N +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMF--KGR 121
                    Q+S+    + +++    ND  L+    L   ++  + +I   DGL+   K +
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQT 301
             + TA +  +++   ++     P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 351
            DGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

[Close]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-47
Identity = 108/351 (30.77%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSV 61
            R  RW   ++D++ EI Y PG  N +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMF--KGR 121
                    Q+S+    + +++    ND  L+    L   ++  + +I   DGL+   K +
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQT 301
             + TA +  +++   ++     P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 351
            DGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

[Close]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-47
Identity = 108/351 (30.77%), Postives = 179/351 (51.00%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVSV 61
            R  RW   ++D++ EI Y PG  N +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF-- 859

Query: 62   GEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMF--KGR 121
                    Q+S+    + +++    ND  L+    L   ++  + +I   DGL+   K +
Sbjct: 860  ------VNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQ 919

Query: 122  LCVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQ 181
            + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C  CQ 
Sbjct: 920  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 979

Query: 182  VKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGK 241
             K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP  
Sbjct: 980  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1039

Query: 242  STYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQT 301
             + TA +  +++   ++     P  II+D D  FTS+ WK         + FS  + PQT
Sbjct: 1040 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1099

Query: 302  DGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE 351
            DGQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE
Sbjct: 1100 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

[Close]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL
Match: A0A5A7TB66 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00060 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 2.0e-192
Identity = 332/352 (94.32%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
           MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60

Query: 61  VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
           VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VETEQGEDFSISSDDGLMF+GRL
Sbjct: 61  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRL 120

Query: 121 CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 180

Query: 181 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 181 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
           TYTASKWGQLYMTEIVRLH VPVSIISDRD  FTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 241 TYTASKWGQLYMTEIVRLHGVPVSIISDRDAHFTSKFWKGLQLALGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
           GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 352

[Close]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL
Match: A0A5A7TDX1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00780 PE=4 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 4.4e-192
Identity = 335/352 (95.17%), Postives = 338/352 (96.02%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            MR RRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQAPLLRDFERAEI VS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVTSQ AQLSVQPTLRQRIIVAQLNDPYLVEKRRLVET QGEDFSIS DDGLMF+GRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLYMTEIVRLH VPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            G+T+RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMA FEAL
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEAL 1080

[Close]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 331/352 (94.03%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
           MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
           VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGEDFSISSDDGLMF+GRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ PAGLLQPLSVPGWKWESVSMDFITGLPKTLKG+ VIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
           TYTASKWGQLYMTEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
           GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 608

[Close]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL
Match: A0A5A7VG30 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003060 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.4e-190
Identity = 328/352 (93.18%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            +RQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 943  IRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1002

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVT++ AQLSVQPTLRQ+II AQLNDPYL EKRR+VETEQGEDFSISSDDGLMF+GRL
Sbjct: 1003 VGEVTAELAQLSVQPTLRQKIIAAQLNDPYLTEKRRMVETEQGEDFSISSDDGLMFEGRL 1062

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 1063 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1122

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQPLSVPGWKWE+VSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 1123 KAPRQHPAGLLQPLSVPGWKWENVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1182

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLYMTEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 1183 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1242

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            GQTERLNQILEDMLRACVLEFS SWDSHLHLMEF+YNNSYQATIGMAPFEAL
Sbjct: 1243 GQTERLNQILEDMLRACVLEFSESWDSHLHLMEFSYNNSYQATIGMAPFEAL 1294

[Close]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL
Match: A0A5A7THM7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004320 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.4e-190
Identity = 329/352 (93.47%), Postives = 335/352 (95.17%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYIPGKVNVVADALSRKVVHSAALITKQAPLLRDFERAEIGVS 60
            MRQRRWLELVKDYDCEILY PGK NVVADALSRKV HSAALITKQ PLLRDFERAEI VS
Sbjct: 836  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 895

Query: 61   VGEVTSQFAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSDDGLMFKGRL 120
            VGEVT+Q AQLSVQPTLRQ+II AQLNDPYL EKRR+VET QGEDFSISSDDGLMF+GRL
Sbjct: 896  VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 955

Query: 121  CVPEDSAVKTELLIEAHSSPFTMHPGSMKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPED+AVKTELL EAHSSPFTMHPGS KMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 956  CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1015

Query: 181  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYIVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ PAGLLQPLSVPGWKWESVSM FITGLPKTLKGY VIWVVVDRLTKSAHFVPGKS
Sbjct: 1016 KAPRQHPAGLLQPLSVPGWKWESVSMGFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1075

Query: 241  TYTASKWGQLYMTEIVRLHEVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 300
            TYTASKWGQLY+TEIVRLH VPVSIISDRD RFTSKFWKGLQLALGTRLDFSTAFHPQTD
Sbjct: 1076 TYTASKWGQLYITEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1135

Query: 301  GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 353
            GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL
Sbjct: 1136 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEAL 1187

The following BLAST results are available for this feature:

BLAST of Cmc01g0012351 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040692.1	4.1e-192	94.32	pol protein [Cucumis melo var. makuwa]	[more]
KAA0041490.1	9.2e-192	95.17	hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]	[more]
KAA0040942.1	2.7e-191	94.03	pol protein [Cucumis melo var. makuwa]	[more]
KAA0042912.1	3.0e-190	93.47	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066264.1	3.0e-190	93.18	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0012351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.7e-47	30.77	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.7e-47	30.77	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.7e-47	30.77	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.7e-47	30.77	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.7e-47	30.77	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB66	2.0e-192	94.32	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00060 PE...	[more]
A0A5A7TDX1	4.4e-192	95.17	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G...	[more]
A0A5A7TBV4	1.3e-191	94.03	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]
A0A5A7VG30	1.4e-190	93.18	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7THM7	1.4e-190	93.47	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44...	[more]

BLAST of Cmc01g0012351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 191..352 e-value: 7.3E-41 score: 141.6
None	No IPR available	GENE3D	1.10.340.70		coord: 89..181 e-value: 1.9E-17 score: 65.3
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 119..350
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 127..182 e-value: 4.0E-16 score: 58.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..352 score: 18.854795
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0012351.1	Cmc01g0012351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding