Cmc01g0012261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0012261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	S-protein homolog
Location	CMiso1.1chr01: 8240418 .. 8240840 (+)
RNA-Seq Expression	Cmc01g0012261
Synteny	Cmc01g0012261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTTTTCAACATTTACACTATGTCTTTTGATATCTATGTTTTTTTCTAGCCTATTCACTACCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAGACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGACATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAGTATGATTTTTGCTATACGTGGGTGGATAAATGA

mRNA sequence

ATGGGTTCCTTTTCAACATTTACACTATGTCTTTTGATATCTATGTTTTTTTCTAGCCTATTCACTACCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAGACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGACATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAGTATGATTTTTGCTATACGTGGGTGGATAAATGA

Coding sequence (CDS)

ATGGGTTCCTTTTCAACATTTACACTATGTCTTTTGATATCTATGTTTTTTTCTAGCCTATTCACTACCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTCAACATAACAAATGCTCTAACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCCTTCACTTTTCGACCAGACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGACATTTACAAGGATTCAAGAGATAGAGATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTCTGTATGTTCCACTATGTTACCAAAAAGTATGATTTTTGCTATACGTGGGTGGATAAATGA

Protein sequence

MGSFSTFTLCLLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVDK

Homology

[Close]

BLAST of Cmc01g0012261 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 20  LFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFIG 79
           LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRP+FIG
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 139
           TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

Query: 140 K 141
           K
Sbjct: 121 K 121

[Close]

BLAST of Cmc01g0012261 vs. NCBI nr
Match: KAA0059530.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 19  SLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFI 78
           +LFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLG+HQLQPLGGYAFTFRP+FI
Sbjct: 78  NLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSADDDLGVHQLQPLGGYAFTFRPNFI 137

Query: 79  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVC 123
           GTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGEQGVC
Sbjct: 138 GTTLFYCTFQWLGWSYNFDIYKDSRDRDRCNDLCLWIVGEQGVC 181

[Close]

BLAST of Cmc01g0012261 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 1   MGSFSTFTLCLLISMFFSSLFTTEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLG 60
           M SFSTF L L IS+ F+++FT EGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  IHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 120
           +HQL  L  YAF FRP+F G+TLFYC F W G SH F+IY+D RDR +CN  LCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 QGVCMFHYVTKKYDFCYTW 138
           QG+CMF Y T  YD CYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Cmc01g0012261 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-38
Identity = 80/121 (66.12%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MGSFSTFTLCLLISMFFSSLFTT-EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLG 60
           M SFST    LL+S+FF++LFTT +G  F++P +TVNITN L   +QL V CKS DDDL 
Sbjct: 30  MNSFSTLAFALLMSLFFTTLFTTIDGSIFKDPPMTVNITNVLKSHNQLAVRCKSSDDDLR 89

Query: 61  IHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 120
           IHQL PLGGYAFTF+P+F G+T FYCTF+W G+SH FDIYKD+RDR +CN  LCLWIVGE
Sbjct: 90  IHQLPPLGGYAFTFQPNFWGSTQFYCTFEWSGFSHYFDIYKDNRDRTKCNNTLCLWIVGE 149

[Close]

BLAST of Cmc01g0012261 vs. NCBI nr
Match: XP_022975116.1 (S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975441.1 S-protein homolog 3-like, partial [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-37
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 13  ISMFFSSLFTT-EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAF 72
           +S+ F++LFTT +G  F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAF
Sbjct: 1   MSLSFTTLFTTIDGSIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 73  TFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGV 122
           TFRP+F GTT FYCTFQWPG+S  FDIYKD RDR +CN  LCLWIVG+QG+
Sbjct: 61  TFRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-23
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 34  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWS 93
           TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 138
           HSFDIYKD RD    ++C +  C+W +   G C F+  TK++D CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-23
Identity = 57/130 (43.85%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 11  LLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYA 70
           LLI + FS + T     +    + V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKM-VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYV 130
           F FR   +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF   
Sbjct: 76  FKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 131 TKKYDFCYTW 138
              ++ CY W
Sbjct: 136 DHAFNICYDW 144

[Close]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 11  LLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYA 70
           LLI + FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPDFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMFHY 130
           F FRP  + G TLF+C F WPG S  F+IY D RD  R       C+W +G+ G C F  
Sbjct: 76  FKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSE 135

Query: 131 VTKKYDFCYTW 138
           +   ++ CY W
Sbjct: 136 IDDAFNICYDW 146

[Close]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.8e-16
Identity = 48/137 (35.04%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 1   MGSFSTFTLCLLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGI 60
           M + S   + L I +F+         PF   +VTV  TN ++ +  LT+ C+S DDDLG 
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPFAKTVVTV--TNNISPQTTLTISCRSKDDDLGE 60

Query: 61  HQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQG 120
           H L     + + FRP +  TTLF C F W      FD Y+  RD+  C   C W +    
Sbjct: 61  HLLLHGQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYS-CNWSINADS 120

Query: 121 VCMFHYVTKKYDFCYTW 138
            C+     KK+D CY W
Sbjct: 121 ACISGNFNKKFDRCYPW 134

[Close]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-14
Identity = 48/128 (37.50%), Postives = 63/128 (49.22%), Query Frame = 0


Query: 12  LISMFFSSLFTT--EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGY 71
           ++  FF  LF +   G P       V +TN L     LT+HCKS  DDLGIH +     Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTN-LIGGPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  AFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTK 131
            F F+P+   +TLF+C+FQW     SFDIY   RD+  C+  C W +   G C      K
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD-CQWEIKPDGPCRLGKKAK 125

Query: 132 KYDFCYTW 138
               C+ W
Sbjct: 126 ----CFPW 127

[Close]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.5e-70
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 20  LFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFIG 79
           LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRP+FIG
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 80  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 139
           TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

Query: 140 K 141
           K
Sbjct: 121 K 121

[Close]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL
Match: A0A5A7UWN1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00420 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.5e-54
Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 19  SLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFI 78
           +LFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLG+HQLQPLGGYAFTFRP+FI
Sbjct: 78  NLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSADDDLGVHQLQPLGGYAFTFRPNFI 137

Query: 79  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVC 123
           GTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGEQGVC
Sbjct: 138 GTTLFYCTFQWLGWSYNFDIYKDSRDRDRCNDLCLWIVGEQGVC 181

[Close]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 94/139 (67.63%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 1   MGSFSTFTLCLLISMFFSSLFTTEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLG 60
           M SFSTF L L IS+ F+++FT EGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  IHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNG-LCLWIVGE 120
           +HQL  L  YAF FRP+F G+TLFYC F W G SH F+IY+D RDR +CN  LCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 QGVCMFHYVTKKYDFCYTW 138
           QG+CMF Y T  YD CYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL
Match: A0A6J1IDA7 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 13  ISMFFSSLFTT-EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAF 72
           +S+ F++LFTT +G  F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAF
Sbjct: 1   MSLSFTTLFTTIDGSIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 73  TFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGV 122
           TFRP+F GTT FYCTFQWPG+S  FDIYKD RDR +CN  LCLWIVG+QG+
Sbjct: 61  TFRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL
Match: A0A6J1IDI1 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.3e-37
Identity = 77/111 (69.37%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 13  ISMFFSSLFTT-EGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAF 72
           +S+FF++LFTT +   F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAF
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 73  TFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGV 122
           TFRP+F G+T FYCTFQWPG+S  FDIYKD RDR +CN  LCLWIVG+QG+
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Cmc01g0012261 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 110.9 bits (276), Expect = 8.2e-25
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 34  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWS 93
           TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  S
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTKKYDFCYTW 138
           HSFDIYKD RD    ++C +  C+W +   G C F+  TK++D CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Cmc01g0012261 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-24
Identity = 57/130 (43.85%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 11  LLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYA 70
           LLI + FS + T     +    + V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIKIAFSQVKTDFDVNWSTSKM-VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYV 130
           F FR   +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF   
Sbjct: 76  FKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSES 135

Query: 131 TKKYDFCYTW 138
              ++ CY W
Sbjct: 136 DHAFNICYDW 144

[Close]

BLAST of Cmc01g0012261 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23
Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 11  LLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYA 70
           LLI + FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++
Sbjct: 16  LLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWS 75

Query: 71  FTFRPDFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMFHY 130
           F FRP  + G TLF+C F WPG S  F+IY D RD  R       C+W +G+ G C F  
Sbjct: 76  FKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSE 135

Query: 131 VTKKYDFCYTW 138
           +   ++ CY W
Sbjct: 136 IDDAFNICYDW 146

[Close]

BLAST of Cmc01g0012261 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 56/141 (39.72%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 1   MGSFSTFTLCLLISMFFSSLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGI 60
           MGS  T  L  ++ MF S++ +           +V I N L     L  HCKS +DDLG 
Sbjct: 1   MGSLETCLLFFVMVMFMSAIMSRAS-------TSVVIYNDLGGGLPLRHHCKSREDDLGY 60

Query: 61  HQLQPLGGYAFTFRPDFIGTTLFYCTFQWPGWSHSFDIYKDSRDRD----RCNGLCLWIV 120
             L P   ++F F PD  G TLFYC F W   SH FDIYK SRD++     C   C W +
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCK-KCEWKI 120

Query: 121 GEQGVCMFHYVTKKYDFCYTW 138
            + G C F+  T  +D CY+W
Sbjct: 121 RKNGPCKFYKKTGMFDHCYSW 133

[Close]

BLAST of Cmc01g0012261 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 48/122 (39.34%), Postives = 60/122 (49.18%), Query Frame = 0


Query: 19  SLFTTEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPDFI 78
           S+  T    F NP  TV I N L     L  HCKS +DDLG   +   G ++F FRP   
Sbjct: 14  SIPPTPTSGFDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVF 73

Query: 79  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMFHYVTKKYDFCY 138
           G TLF+C F W    H FDIYK SRDR+        C W + + G C  +  +  +D C 
Sbjct: 74  GGTLFFCGFIWDKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCL 133

The following BLAST results are available for this feature:

BLAST of Cmc01g0012261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465559.1	1.3e-69	98.35	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
KAA0059530.1	1.8e-53	92.31	pumilio-like protein 15-like [Cucumis melo var. makuwa]	[more]
KGN61530.1	2.9e-48	67.63	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_023522352.1	3.6e-38	66.12	S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_022975116.1	2.3e-37	70.27	S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein h...	[more]

BLAST of Cmc01g0012261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.2e-23	47.22	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	7.5e-23	43.85	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	1.1e-21	40.46	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	6.8e-16	35.04	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
O23020	3.7e-14	37.50	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Cmc01g0012261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CP53	6.5e-70	98.35	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A5A7UWN1	8.5e-54	92.31	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00...	[more]
A0A0A0LI28	1.4e-48	67.63	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A6J1IDA7	1.1e-37	70.27	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1	[more]
A0A6J1IDI1	3.3e-37	69.37	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1	[more]

BLAST of Cmc01g0012261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	8.2e-25	47.22	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	5.3e-24	43.85	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	7.7e-23	40.46	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	1.9e-21	39.72	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.2e-18	39.34	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..137 e-value: 5.9E-32 score: 110.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 7..137
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 7..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0012261.1	Cmc01g0012261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane