Cmc01g0012181 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCTACGAAAGAAGAAAACGTGGCTAAGTCTTGTTCACTCCTTCAACTTCCAACGGTTTCGGAGTCTACTACGGACCTTACCAACTCCATAATTCCCCCATTAATATGGAAGCTGCAACTCTCCAGCTTCGAATCCACATCTCCATTGGAACACTCGCAATGTTTCTTCTCAAGGCATTCATCTCTCACTTTTCTTTTGTTACACCCCCCAAATCTTTGATTCTGTGTTGAGATTTTTTGTGTTTTGAACTCTTACCCTATTCCCCTTGTTGCGTCCAGGCATGGAGACTATCAGCTTTTGGGGTCTATGGCTACCTCAACTTCACCAAATCTGCATTCATGTAAAATTCTTGTTAACCATTTTTTGTCAATTTTAGTCCTTGTCTCTATAATTTTAGAAGTTGGAATTTAGTACCTGTGATGTGATAAAATATCACTGATTTTTCTGATTGATTGATGAAACGTTCCTAAATAGTCTCTATCAGAGTTTAGTCCCTACCCGAACGCTTTGATAAAACCTAACTAATTATGACGGTTTTGTCAATCCGCGGGACTAATTTGATTCTAAATTTCTCCGGATCATGGGGCCAAATTTGTAATTTTACTTTAATTTTTTAATGGAAGTTGTTTGATTTGGTCATGTTTGGACTCAAAATGAAATTGCATTGGTAATTTGGAAACAATTCTCTGTGAGTTTCATTTCGGAATCGAAGGATATGATGTAGATATGGTACAAAATGGTTGGCCAAGGAGTACTTTTAGAAACAACTTTTGCCAAAAACCTTGATTATTTCGCTTTGTTTATGGTGGCTTGTCTATTGATCATTCTTTGGATGCTTACTTTCTTGAAGAAATTCAAGAAAGTAATTCAGGTTGGAATTCTTATACAATTTTACCCTGTACCTTGCTTAGAAAACCCCGTTTATTTTAACAGTTCCTTTTTTGTGATTTTAACCATGAACAACTTTATAAATATGTTTCTAATTTCGCTTATGTAATTAACTCTTAACTTATTTATGACTATAGTGAACATTCTAAGATGTTCAAACCAGAGGATATGCAAACGAACATTGAAGGGAAAAATTGCATTGTTACCGGGGCGAATTCCGGGATTGGATATGCAACTGCAGAGGGTTTAGCATCACGGTCTTGATTTCTTTTTCCCATTTTTTTTTCTGTTATATTTGTTGAGTCGACATGGAACAAAGCTTATGTAAAAAAACTAGTGATTCATTGTGGAAGCATGAAATTTCTGCCGTTTTTGCAGTGGAGCTACTGTCTACATGATATGCCGCAGCAAGGAAAGAGGAGAAGCTGCTCTTTCCGAGATAAAGTCTAAAACAGGAAACCAAAATGTTCATTTGGAGGTAGTTCTTTTCCAACCACCATTCACTACAGCATGCGGTTTCTATAATAAATCTGATATCAAAATTGAAATCATGCTGGCTTCTAGGTGTCCTTAGTATCATTTTCTTTTGTTAGGATACCTCCTAATAAACATTTAAGAACAACACGGAAACTCAAGAACACTTGACTACGGAAATACGCTGTAATATTATAAGAAAAAACCAGATAACCTAAACTTTCGAGAGAGCTAGTGTCTCCCAAATTCTCCAAAGAAAATCCCACAAAAATCTTTACACCTTGCTGCCAACCCAATTCCTCTGTCTACTTATATAATTTTTAACAAGCTTACTACCTATTTACTAACATCCCCCTTCTAATAGGCATACTAATAATCTGACTATTTCCATAACTAGGAGGGTCTTACTTTTTTCCTACTTTGTGGTAGACACTCAACCTTTTTGTAACTTCTTTCTTGTAAATGATATGTGTGGCAAATCTTTTAGGATATGCTATATTTAATAATATTAAGGGATAGTTTGAATGATAAGTATAGTAGGTTTGTCTCAATTTAACTGTGGGATAACTAGAAGCAGTGAAGCACCTATTAATTCTATTATCGAGTTTGGTTTTCTTTTTTTAAATAATACATTATAACCTTAGCTCCCTTATTATTTAATAACTTTTCTTTAGTTTGCAGGTCTGTGATCTTTCCTCAATCAGGGACATTAAGTCATTTTCCTCAAATTTTATTTCAAAGAATGTCCCAGTCCACGTTCTGGTAATGAATCTGTCTTTGTAATATATTCCTTTTATGTTCTAAAAATTATATGTTTTAGTCTATTTTTGCATTATGCCTGCAAAATCATCATCATTTACTTCATGTTAGATCTGGTCATTTTGTCAATGTAAGGTATCTCCTTACTATTAATGATATTACCATTATAAGAAAGGGCCCTAAAGATGTTCAACTCCTGCCGACATCGGAGTGCTGGTTCTCTCCTCCTCGACCTACTTCTTTTGTACAGACAAAAAGCGTATATTTCCTATTCACTAAACATTATTATATATACTGATGACATGCATTCCCGTATGCTCTCTCTGTGGTCCGCCCAATGCTAACTAACCTTCGCACATAATTTTCCTTCTTACCTCTCCAAGAATACTTTCAGCATATTGGGGGCCTAGAACCCTTGCTATCTATTAATTTGTCACTTTTAACATCATGAAAACAGTATCCTTTGGACTTTGATTTCGAAGACCTTTTGTATTCCATTAGTAGCATTTTACTTAATTGGACCCTCTTCAAGTTGGGGTGTTTTGGTGGCCGGTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTGTATCCTCTTATATTTTTTCATTTTTTTCTCATTGAAAGTTGTTGTCTCTATTAAAAAAAAATAATCATGAAAACAGTGGGTTTTATTTTCTCCCTCATCCTTGATACAAAAGTGTTTGATTTCTATTACTAACTGTAAATAGGTTAACAATGCTGGATTGCTTGAGAAAAATCGGATTACGACGTCTGAAGGGTATGATCTCCTTTATTTGTGTGCTTTTACTAAGCTCTTCTCTCTATCTATATTTTTTGTTTCTCCCAAAATTCTTAATAATTTCTGAATTCCAGGTTCGAATTGAACTTTGCTGTGAATGTTTTAGGCACTTATGCAATGACTGAATCATTGTTGCCATTGCTGGAGAAAGCTGCACCTGATGCAAAGGTCATCACAGTTTCTTCTGGTGGAATGTATTCAGTTCCCTTAACCGATGATCTGCAGGTAGGCTTCCTTTTTAAACTTCTCTGCCTTCCCCATTTGCGGACCTGATATAGTGATTCTTTTATTTGTTTCCTTGTAGTTTAGTGAAGACCAATTTGATGGGGCCATACAGTATGCACTTAACAAACGAGTTCAGGTTAGTAATGCTGCATATAGTGTTCTAAAATCACTATGCTTTTGATTTACTGTATGCTGTTACAATGCATTGTTTTATGGTTTTCTCTTACCAGTGTTAAAAATTTTAGTTCTTTTTAATAGGATCAAAGTTGAGAAGAAATGTAAGAATACAAGTGGCATAAAAGAGAAAAAAAATTAAACCCACAAAAAGGGAGCCTTACAAAATGGCACTTCAGTCGAGTAAAATAAGACCTTAATGATAGCTGCAGAAAAGCGTCACTACTAAAGCCGGTAGATAAACATAGAACTTTACAAAGGACCAAACATCACTTGAAACCTTTTCACGTCCTCCAAAGATTCTATTGTTCTTCTTACTCCAAAGACCCCAATCTGAAACTTTTGTTTTTTATTGAATATCTATTTTAAACTATTTGTTAAATTATAAATTTAATATGTGATGTCTTGTATAATTCTTACTTATTCTTATACAAGTAAAAGCTTTTATTTTTATCTGTTAATTTGAATCTTACTTTTGTCTAATCTTTATCACTAGCATTACTGTGTTTTAATTAAATTTTTTTACATGTGTAGATTGATAAATTGATCAGGACTCAAATTTATTAACAAACTATTATTGCCACTTAATTTTGATGAAAATTTTCACGAAGTTTTTATAAATCCAAAAGGAATAGAAGCTAAATTGTTACGTATTATAGTTTATAGACAGATTTGTTACCAACTAAAGTTCAGGGAACAAAAAGTATTTGATAAAAGAATCGATGATGTGACATGTTCATTGGAACTTTGAATTATACTTTTTTCTAGTCTCTAACGCTTATATGTGCAAAGAAAGTAAAACCAATGTATATATGAAACCCAATAAAGTGACATGAATAGATGTGTGTAATTTAACCTCGCTTGACACTGTTAAGATTACTTGATTTAGTCATTGCCGCTAGTGAATGAAGCTTCCTTTTCAGGTGGCTTTAACAGAGAAATGGGCAGAGATGTACTCTAAAAAAGGGATTGGATTCTACTCGATGCACCCCGGTTGGGCCGAAACACCCGGAGTGACTAAATCTTTACCGAGTTTCTCTAAATCGTAAGGATAGCTAGCAAAATCTTTGTTCTTTGAAGTGAACTTCTAATAGTTTTCGATTATCAATTTGGCATTTGATCATTTCAGTCTCTCGGGGAAGCTAAGAACGAGCGAGGAAGGGGCCGATACGATTATTTGGTTGGCTTTACAGCCAAAAGAGAAGTTGGTACCTGGAGCATTCTACTTTGATAGAAGGGTAGCACCAAAGCATTTAGCTTTTGCCGCTACGCAGTCTTCTCATACAGCAATGGGCTCTATATATGATCATCTTCGTTCTTTGTCTGGCTTGGCTCAATAATCTAAACGAGTTGAGAAAACACACTTAGTTAATATTGTAGTATTTGTTGTATCGTATGTTATTGACTAGAAGATAACTCAGGAAACACATAAACAACACAGAAAAAACATCTGACTTTGTTAACCTAGTTTGATGACACAACATTTACATTGGAAGGTCCTTGACCCATGATAATAGATAATATATTGTTTTGTGTAATATTTGATGATTATGATGTCATGACTCAAAAGTACAACAATCTTTATCTAACTTAACATGTATACAAAATGATTTG TGTGCTACGAAAGAAGAAAACGTGGCTAAGTCTTGTTCACTCCTTCAACTTCCAACGGTTTCGGAGTCTACTACGGACCTTACCAACTCCATAATTCCCCCATTAATATGGAAGCTGCAACTCTCCAGCTTCGAATCCACATCTCCATTGGAACACTCGCAATGTTTCTTCTCAAGGCATGGAGACTATCAGCTTTTGGGGTCTATGGCTACCTCAACTTCACCAAATCTGCATTCATTGAACATTCTAAGATGTTCAAACCAGAGGATATGCAAACGAACATTGAAGGGAAAAATTGCATTGTTACCGGGGCGAATTCCGGGATTGGATATGCAACTGCAGAGGGTTTAGCATCACGTGGAGCTACTGTCTACATGATATGCCGCAGCAAGGAAAGAGGAGAAGCTGCTCTTTCCGAGATAAAGTCTAAAACAGGAAACCAAAATGTTCATTTGGAGGTCTGTGATCTTTCCTCAATCAGGGACATTAAGTCATTTTCCTCAAATTTTATTTCAAAGAATGTCCCAGTCCACGTTCTGGTTAACAATGCTGGATTGCTTGAGAAAAATCGGATTACGACGTCTGAAGGGTTCGAATTGAACTTTGCTGTGAATGTTTTAGGCACTTATGCAATGACTGAATCATTGTTGCCATTGCTGGAGAAAGCTGCACCTGATGCAAAGGTCATCACAGTTTCTTCTGGTGGAATGTATTCAGTTCCCTTAACCGATGATCTGCAGTTTAGTGAAGACCAATTTGATGGGGCCATACAGTATGCACTTAACAAACGAGTTCAGGTGGCTTTAACAGAGAAATGGGCAGAGATGTACTCTAAAAAAGGGATTGGATTCTACTCGATGCACCCCGGTTGGGCCGAAACACCCGGAGTGACTAAATCTTTACCGAGTTTCTCTAAATCTCTCTCGGGGAAGCTAAGAACGAGCGAGGAAGGGGCCGATACGATTATTTGGTTGGCTTTACAGCCAAAAGAGAAGTTGGTACCTGGAGCATTCTACTTTGATAGAAGGGTAGCACCAAAGCATTTAGCTTTTGCCGCTACGCAGTCTTCTCATACAGCAATGGGCTCTATATATGATCATCTTCGTTCTTTGTCTGGCTTGGCTCAATAATCTAAACGAGTTGAGAAAACACACTTAGTTAATATTGTAGTATTTGTTGTATCGTATGTTATTGACTAGAAGATAACTCAGGAAACACATAAACAACACAGAAAAAACATCTGACTTTGTTAACCTAGTTTGATGACACAACATTTACATTGGAAGGTCCTTGACCCATGATAATAGATAATATATTGTTTTGTGTAATATTTGATGATTATGATGTCATGACTCAAAAGTACAACAATCTTTATCTAACTTAACATGTATACAAAATGATTTG ATGGAAGCTGCAACTCTCCAGCTTCGAATCCACATCTCCATTGGAACACTCGCAATGTTTCTTCTCAAGGCATGGAGACTATCAGCTTTTGGGGTCTATGGCTACCTCAACTTCACCAAATCTGCATTCATTGAACATTCTAAGATGTTCAAACCAGAGGATATGCAAACGAACATTGAAGGGAAAAATTGCATTGTTACCGGGGCGAATTCCGGGATTGGATATGCAACTGCAGAGGGTTTAGCATCACGTGGAGCTACTGTCTACATGATATGCCGCAGCAAGGAAAGAGGAGAAGCTGCTCTTTCCGAGATAAAGTCTAAAACAGGAAACCAAAATGTTCATTTGGAGGTCTGTGATCTTTCCTCAATCAGGGACATTAAGTCATTTTCCTCAAATTTTATTTCAAAGAATGTCCCAGTCCACGTTCTGGTTAACAATGCTGGATTGCTTGAGAAAAATCGGATTACGACGTCTGAAGGGTTCGAATTGAACTTTGCTGTGAATGTTTTAGGCACTTATGCAATGACTGAATCATTGTTGCCATTGCTGGAGAAAGCTGCACCTGATGCAAAGGTCATCACAGTTTCTTCTGGTGGAATGTATTCAGTTCCCTTAACCGATGATCTGCAGTTTAGTGAAGACCAATTTGATGGGGCCATACAGTATGCACTTAACAAACGAGTTCAGGTGGCTTTAACAGAGAAATGGGCAGAGATGTACTCTAAAAAAGGGATTGGATTCTACTCGATGCACCCCGGTTGGGCCGAAACACCCGGAGTGACTAAATCTTTACCGAGTTTCTCTAAATCTCTCTCGGGGAAGCTAAGAACGAGCGAGGAAGGGGCCGATACGATTATTTGGTTGGCTTTACAGCCAAAAGAGAAGTTGGTACCTGGAGCATTCTACTTTGATAGAAGGGTAGCACCAAAGCATTTAGCTTTTGCCGCTACGCAGTCTTCTCATACAGCAATGGGCTCTATATATGATCATCTTCGTTCTTTGTCTGGCTTGGCTCAATAA MEAATLQLRIHISIGTLAMFLLKAWRLSAFGVYGYLNFTKSAFIEHSKMFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASRGATVYMICRSKERGEAALSEIKSKTGNQNVHLEVCDLSSIRDIKSFSSNFISKNVPVHVLVNNAGLLEKNRITTSEGFELNFAVNVLGTYAMTESLLPLLEKAAPDAKVITVSSGGMYSVPLTDDLQFSEDQFDGAIQYALNKRVQVALTEKWAEMYSKKGIGFYSMHPGWAETPGVTKSLPSFSKSLSGKLRTSEEGADTIIWLALQPKEKLVPGAFYFDRRVAPKHLAFAATQSSHTAMGSIYDHLRSLSGLAQ Homology
BLAST of Cmc01g0012181 vs. NCBI nr
Match: XP_008461902.1 (PREDICTED: dehydrogenase/reductase SDR family member 12 isoform X1 [Cucumis melo] >XP_016902772.1 PREDICTED: dehydrogenase/reductase SDR family member 12 isoform X1 [Cucumis melo] >XP_016902773.1 PREDICTED: dehydrogenase/reductase SDR family member 12 isoform X1 [Cucumis melo]) HSP 1 Score: 669.1 bits (1725), Expect = 2.0e-188 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
BLAST of Cmc01g0012181 vs. NCBI nr
Match: XP_004139691.1 (dehydrogenase/reductase SDR family member 12 [Cucumis sativus]) HSP 1 Score: 636.3 bits (1640), Expect = 1.5e-178 Identity = 320/340 (94.12%), Postives = 330/340 (97.06%), Query Frame = 0
BLAST of Cmc01g0012181 vs. NCBI nr
Match: XP_038899726.1 (dehydrogenase/reductase SDR family member 12 [Benincasa hispida]) HSP 1 Score: 630.6 bits (1625), Expect = 8.1e-177 Identity = 315/340 (92.65%), Postives = 327/340 (96.18%), Query Frame = 0
BLAST of Cmc01g0012181 vs. NCBI nr
Match: XP_023535216.1 (dehydrogenase/reductase SDR family member 12 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 609.8 bits (1571), Expect = 1.5e-170 Identity = 303/340 (89.12%), Postives = 319/340 (93.82%), Query Frame = 0
BLAST of Cmc01g0012181 vs. NCBI nr
Match: KAG6592207.1 (Dehydrogenase/reductase SDR family member 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 609.0 bits (1569), Expect = 2.5e-170 Identity = 303/340 (89.12%), Postives = 319/340 (93.82%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy Swiss-Prot
Match: A6QP05 (Dehydrogenase/reductase SDR family member 12 OS=Bos taurus OX=9913 GN=DHRS12 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 4.6e-66 Identity = 140/314 (44.59%), Postives = 189/314 (60.19%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy Swiss-Prot
Match: A0PJE2 (Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens OX=9606 GN=DHRS12 PE=2 SV=2) HSP 1 Score: 240.4 bits (612), Expect = 3.1e-62 Identity = 135/305 (44.26%), Postives = 179/305 (58.69%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy Swiss-Prot
Match: Q8TC12 (Retinol dehydrogenase 11 OS=Homo sapiens OX=9606 GN=RDH11 PE=1 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 3.9e-33 Identity = 87/255 (34.12%), Postives = 144/255 (56.47%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy Swiss-Prot
Match: Q96NR8 (Retinol dehydrogenase 12 OS=Homo sapiens OX=9606 GN=RDH12 PE=1 SV=3) HSP 1 Score: 140.6 bits (353), Expect = 3.3e-32 Identity = 94/264 (35.61%), Postives = 146/264 (55.30%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy Swiss-Prot
Match: Q9QYF1 (Retinol dehydrogenase 11 OS=Mus musculus OX=10090 GN=Rdh11 PE=1 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 4.3e-32 Identity = 88/288 (30.56%), Postives = 157/288 (54.51%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy TrEMBL
Match: A0A1S4E3H2 (dehydrogenase/reductase SDR family member 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500396 PE=4 SV=1) HSP 1 Score: 669.1 bits (1725), Expect = 9.9e-189 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy TrEMBL
Match: A0A6J1F992 (dehydrogenase/reductase SDR family member 12 OS=Cucurbita moschata OX=3662 GN=LOC111443262 PE=4 SV=1) HSP 1 Score: 608.6 bits (1568), Expect = 1.6e-170 Identity = 302/340 (88.82%), Postives = 319/340 (93.82%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy TrEMBL
Match: A0A6J1IKU6 (dehydrogenase/reductase SDR family member 12 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477154 PE=4 SV=1) HSP 1 Score: 606.3 bits (1562), Expect = 7.9e-170 Identity = 303/339 (89.38%), Postives = 317/339 (93.51%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy TrEMBL
Match: A0A6J1INJ9 (dehydrogenase/reductase SDR family member 12 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477154 PE=4 SV=1) HSP 1 Score: 598.2 bits (1541), Expect = 2.1e-167 Identity = 303/349 (86.82%), Postives = 317/349 (90.83%), Query Frame = 0
BLAST of Cmc01g0012181 vs. ExPASy TrEMBL
Match: A0A0A0K9G2 (Helicase C-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G291710 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 8.2e-167 Identity = 297/317 (93.69%), Postives = 307/317 (96.85%), Query Frame = 0
BLAST of Cmc01g0012181 vs. TAIR 10
Match: AT4G09750.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 499.6 bits (1285), Expect = 2.0e-141 Identity = 241/320 (75.31%), Postives = 276/320 (86.25%), Query Frame = 0
BLAST of Cmc01g0012181 vs. TAIR 10
Match: AT4G11410.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 107.5 bits (267), Expect = 2.2e-23 Identity = 77/262 (29.39%), Postives = 135/262 (51.53%), Query Frame = 0
BLAST of Cmc01g0012181 vs. TAIR 10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.9e-23 Identity = 81/259 (31.27%), Postives = 129/259 (49.81%), Query Frame = 0
BLAST of Cmc01g0012181 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.9e-22 Identity = 74/256 (28.91%), Postives = 128/256 (50.00%), Query Frame = 0
BLAST of Cmc01g0012181 vs. TAIR 10
Match: AT4G23420.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 100.9 bits (250), Expect = 2.1e-21 Identity = 76/266 (28.57%), Postives = 128/266 (48.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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