Cmc01g0012171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0012171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DEAD-box ATP-dependent RNA helicase 39
Location	CMiso1.1chr01: 8004416 .. 8026302 (+)
RNA-Seq Expression	Cmc01g0012171
Synteny	Cmc01g0012171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTCGGAAAAAAATCCAAAATATCAGGGGTTTTAGTTAGCAATGTCTTACCATGAAGCTAGGAAGATGGGAGAGCAATGAGGCGGCATAATAAAACCTCCATACTTCTTTTCTTCTCTACCATTCACTTTGCCCCGTCTTAAATTCAAGGCGAAACTTCTTCTTACACCAATTGAGAATAAAAAATCGCCATGGGAGGTACAGGAAGGACTCTCCTCTCGCTTTCAATCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCTAAATGTCTTCCACTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTCTTTCCTCTGCTACTACCGCCACAACCTCCACTGAATCCACGGAAGCAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACTAAGCCAACCAGAAACACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAACAAGAAGTTGGTTGAAAGTTTTGAAGAGTTGGGTTTAAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAAGTTCCCACTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGAAAGAGTGTGATTTTGGGTTCCCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGGTACTTTTAGTTTTTCTAATTCAACTGTATTTTTGTTGTGGGGTTCCCGTAAATATGTTGTAGACTAAACTATTTTCTAATATTTGGAGCCTGGTAGTGGTTGTGATATTTGCTTCGTGTTGTCACTGTACAGTTCTACATTTAGAAGGATTTTTTTTCCTAGTAACTATCTTCTATCTTGTCACATTATTCTATGAATTGCCTGATTCCATCTTTGATGCAAATTGGTTTGATCTTTTTCTTTTTCTTTTACTCTCCCTGTGTATAAGATGTTGGTATTGGCAGTGTAACCTATTGGATGACGACGTATGTATGTTGATTACTGTGTGTTCTTTACTTGTTTTATAGTATCCCAGTTGACTAATTAAGTAGTATTTGCGATTTCTGATTTGTTTGTTTTCAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAAGTTAATGAAGCCTAGGCGTCCTAGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTAGCTTTAGGTTGACTTGGTTTTATTACATTCTCTGCTATATAATTTTATATAGTATCCCATTAACGTCAAATGATTACAATAGGTGTTTCGTGTATCGAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTCAGGCAGGCAACATGGTCTATGGTGACATCAAATACTTGGTGCGGACCTAATATTGTGGTTTTGATTTTGCATTCAGTCCAGAATTACTTAAGTTCCCTGATATTGTTGTCCAGAATAATTTAAGTTCCCTGCATTGATTTTGTAAATTTTTCTTCTGAATATATGTGACACCGTCGTGATTGTGATATGTCATTTTAGTAGGTGCTTGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCTGACATTCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTGGTCACTGCAACAATGACAAAGGTATTCTTAGTTGCTATTGTGAAATAAATGATTTCTGAAAAATATGTAATAGTCTAAATGTTTAGATAGAACCATCATGGGTTGGTCTAGTGGTAAAAAAGGAGACATAGTCTCAATAACTCAACCAAGAGGTTTTGGATTCAATCCATGGTGGCCACCTACCTAGGAATAAATTTCCTACGAGTTTTCTTGACATCTGAATGTTACAAGGTTAGGTAGGTTGTCTTGTGAGATTAGTCGAGGTGTGTGTAAGTTGGTTCGGGGACTCGTGGATATTAAAAAAAGGTCTAAATGTTTAGACATATACTAGTGACGAGAGATCCAACACAAGAAACAATGAATTGATAACCCAGTTCAACAAAACTATGCCTACATCTGGGGACAAACTTGTCCAATAAGGAGTAATACTGATAATCAATAGTGTTAAATTTACATCAACACTACAAGGAATGTATTACACCGTTGAATGACTTAAGATACCCTAAGACATGCCTCCATCACCTTGAAGATTATCTTAGTTTAGGCTCTGCTAAACTCAATATCCTTCTTTTCTGCGGAAGATTACGCATTGAAACTCTCCCTCAATGTCTCCATCTCTTTTTCACGCCATCTGCAAAAGGGTGTGGCTCCACCAACAAGGTGCCTCCCTGAAAAACAGCTACTAAGCCTAAAAACCAACACAACCAACTACTAAAGATTGGAAATGTACAAAATAAAACAAAGATATATTATCATACAGTCTTACAAATGAGACAAAAAGGAACAACACCTATAAAGCGAATAAAGGAAAATTTCAAGCCAATTATTAATCAAGGAGCACTAACAATTTTAATTTTGATGTAATAGAATTCTTTTCTCCCTGTTGAGATCATATTGTTCTTCGAATCTGTATGGATTGATAACTTTGAGAAAAAATCCAAGGTAGGCCTGCTGAACCTGATGGAACCTTTCTTTGTAATTGCATTGATAAAATGATGTTAAATGTTAAAATCCTTTTGACAATATGTTCTATATGTGAGATCAGTTTCCTTGTCTACTTTCTAGTTGAGTCATTCGGTTTGATTTACAATTTCAGCATTTCTTGTCTCATTATACATTTTGATTTTTAAAATTCTCCTGCTCATTCGATCTGGCCATTGCTGCAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTCTGACTATGGTATTCTTTTTCTTGGGTACTTCTTAGTTTGGTTATGGACGTCCTGGTAAATATTAGCTTAGATTCTTAGACCACAATCTCCTTATTTCCATGAAGTTCATGGTTTTCTCGTTGGTTTGTGCCTCATACCCTCTTCACAACCAGGTTAAGAAATAGGGAAATTTGTACTCTTTATAAAGCATGGGGTCTAGTTCTATAACGAGCATAACCTTCTGGTTTAGTTGCATCACTGGGAGGTGGAGCCGTAAATAGACAGCCAGCGCTAGGCTGGAGGAAGGTGAATATGTAATATGTTGTCTGAAGATCATGTTTCTTTTGCCTAGACGAAGGGTTGAATGGATTGTATTGAAATTAACGACAAAGAACAAACACAAGATTTACGTGGAAACCATAGTAGAGGGAGAAAAACCACGGTGGAGAGATTTCTTATTATTTACTTATGCAACAAATAATACAAGAGGGGAAGATTAATAGGCAACAAGAGCTTAAGTTAAAAACGGAAAGAATAACTCTAACACACATAAAATACAAGAATTCCTTTGGGCTTTCAACACATAACAAGCCCACTAACCCTAACACTTCCCTTCAAGTTGGGACATAAATGTCAATAAGCCCAACTTGCTAACGTAGGAATCAAAGTTCTGTCTGTGAAGCCCTTTGGTAAAGAAGGTCAGCAACCTGTTGACCTGAGGAAATGTAAGGAATGCATATGCTACCATTGTCCAATCTTTCTTTAATAAAGTGTCTATCAATCTCCACATGTTTGGTTCTGTCATGTTGAACTGGATTATTAGCGATGCTAATAGCGGTCTTATTATCTCAAAATAATTTCATAGGCGCCTCATAGTTTTGACGAAGATGAGATAATACCTTTTATAGCCAAATCTTCGTACATATCCCCAAACTCATAGCCCTGTATTTAGCTTCAACACTGCTTCTGGCCACAATCCCATTGCTTTTCACTTCTCCAAGTTATGAGATTGCCCCACACAAAAGTAGAGTACCTAAATGTGGAATTTTTTGTCCATAAAAAACCCTATCTAGTCTGAATCAGTATAGGCCTCAATACACCGTCTGTTAGTTTTCCTGAATATCAACCTCTTACGAGGAGTAGTTTTCAAATACCTCAGAATTCTGTTAATTGCCTCTATACGTTCCTCATAAGGTCCCTAACGGTGTTTAACTTTGCAATGGGATAATGAGTCTTAGTGTAGTTGACCCCATAAGTCTAAGTAAACTCGTTTGCCAATAAATTAGCCTTGTGTCTGTCTAGAGTTCCATATGCTTTGTACTTGAGTTTAAACACCCATTTACATCCATCCCACAGCTGTATGCCCCTTAGGTAAAGCACAAAGCTCCTAAGTCCTGTTCTTTTCAAGTGCTCTCATCTCTTCCTTGTCTGCAGTTTTCCACTTAGAGCACTCTAAGGCAATGTGAATGTTCTTAGGTATCGTGGTGGAGTCAAGACTGGTTGTAAAAACTTTGAATTGGGGAGATAAATTCTCGTAAGAGACATAGTTATAGATGGAGTGTTTTGGTGCGGGACCTGGTACCTTTCCTCAGCGTAATAGGTATGTCAAGAGACAGATCATACTCATCAAGGTTACCTGAACGATCTTGTTTAGCCTCATCACTTATCGTTTCTGCCATGACTTCTATCTCATCAGCACTTCCTTTTTCACTCATATCTTCTAGAACAACTATATTAAACCTGTTATTCTGACTCATTTTACTGTCGACATATGAATCAATAGAATTAGTCATACCTTAATCTCGTGATGGTTTAGAATCTTGGATCGGAGCCAGGTAAGCAGTAGGGAACCTACTTCCTATCTGAGATTCCTCTTATAGTAGGTTATCCAGGGAACTTTGTTTGGAGGTAAGACCATGTTATGAGGATGGAGGTTAGGGAAGGGTAAGGTAACAAGAGTAGGACTAGTAGACTTGGAACCACACAGTTAGGCTCTTCACTCATATTTTACCTCTGAAGCAGGCTAACGGGAAAGAAAGGACGATCTTGAAGGAAGGTGTTACCCATGGAGACAAAGTACCTACGGGAAGGAGGATGGAAACATTTATAGCCCCATTGATGGAGAAGATACCTAACAAACACAAATGCCTGAGCCTAAGGGGCGAATTTGGTCTGGTTAGGGCCATGGTTATGAACGTAGGCCATGCACCCGAACACCTAAAGGGGAACATTAAAAATGAGACGGGTAGAGGGATAAAACTCCTTGAGACATTCAAAGGGGATCTAGAGGTGGAGGACACGAGAGGGCATCCGGTTGATAAGATGTGCTGCAGTAAGAATAACATTGTCCCACTATAGGAGGAAAGGGAAGTAGATAAGGGAAGGAGCTACTTCTATAAGGTGATAGTTTTTTCTCTCGGCAACTCTATTTTGTTGGGGTGTAAGCTCAGAAACTTTGGGGGATAATCCCTTTGAAGAACATGAACTCATTAAGGGTATGGTTTTGAAACTCAAAACCATTCAATTTGTAGAATTGCAATTTTTGCATTGAACTACATTTCTATATTGTGATCTAAGTCCCGAAATATGGAATCAACCTCGGCTTTGTCAGAGATGAGAAAGACCCTAGTAAGGCGGGTATGTTCATCAATGAAGGTCACAAACCACCATTTCCCAGGAGCGATAGCAACCTCGAATGGTCCCTAAACATCACTATGGATAAGGGTGAAATGTTGGTTTGGTTTGTATGGTTGTAAGGGAAAGAAGACCCGATGCTTTAGCCCGAATGCACACAATACAAGATAAGGTAGACACATCAACTTTAGAGGAGAGATGGGGAAATAAATGTTTCATATATTGAAAATTTAGGTGGCCTAAACGGGAATGCCACAACATACAATCTTTTTCAGAAGTAGTGAAGTACGAAAATAAAAAAACTAGTCCTAGAAGTGCTATTAGAGGTAGCATTATCGTGAAGGAGGTAGAGTCCTCTATTGTGTTCGGGCAATGCCAATCATCCTCCCCAAGCTCAAGTCTTGAAAAGAAACTAAATCATGTAAGAAAGTTGCTTTGTAGTTCAGCTCACGTTAATGTTGCTTATAGGTAGCAAATTATGAGAAATTCTAGACACATTAAACACATTCTATAAGGGTAGTCCTTCAAAGGGAAAAATTTGCCCCTTCCTAGCAATTTTGGCTAAGGAACCATCTGCAGTTCTATTTTTTCATTACCGGCACTAGGAATATAAGAAACAAAATTCTCAGAGGAACCTGTCAAATGATCTGCAACACTAAAATCCAGGATCTAGGGATTCTTCCCATCAACACTAATAAAACTGAGGGATTGAGACATACTTGATTGAGCAGTAGCTCCTAGTGTGGAAGAACTAGGATCATTCTGGTTTCCAGTGAGACCAGATGGTTGAGAGATACCAGCAGACTCACTCACATAAGCTCGTCCTGAATTATGTTTGTCGTTCGGAGAATGTTTCTTTCCTCATGGGGGATGACCGTATAATTTCCAACACTATTCTTTGGTGTGCACAATTTCTTGCAATGCTCACAGATAGGGACTGATTTCTTGTTGTGCTTCTCACTTTATGAGTAGAGGATCTCACACTAAAGGCAGCGAAATCAATGGCGAGAGTGGTTTGAATGTTCGTAGCCTCGTATGGTCCTTCTTAAGGCGGACTTCAGAACATACCTCCATTAGGGGGGAATAGGTCTTTGGCTCAGTATACGACCACGAACTACATCGAGCTTTGGGTATAGGTGTCACGCCCTGCCCCATATGCCACTTCCCACGGCCAGATGGAGGACATGTCGCCTAGACACTCGCTGCGTATCTCACTGGAGATGACTCGATGAACATCTAGTTAGTGAAACAACTTACTCCAACTTGTTTAATCGCATGGCCTTTGCCTCAAACCTTAGAGACTTAATTCAATAAAGCGGAAAAATCTACAACCTTTAGACTTACTCCATCGCTTAGCACTCTTGTCACAACAAAGAAATTCATTACTAAGCGGTAAGTACAAAAAATAAGCAGCGAATAAACATAACTTCTCTTTTTATTAACTTGACACTTTACACAAAGTCCAACTTAGCAGTTACATTCTTTTTCTCACTAGGCATAAAATTTAAAATTGAGTTCTGATCCACTTTTCTTTCTCTACCCCCCCCCCCCCCCCAATGTTGCTCCTTACAACGGGGTATTTAGAGGTGTAAAGACCTCATTTTCATCCTTCTCCTCAGTTGCCCATAAACCATTTCAGGGACAACCTTCAGGGCTTCCTTTCTTTGGCTCAGTTCCTTCACACTCATCATCTTCAGCCTCTCCAACCTTAATGCGTTGGACGACCTTCCTTCGGTCTGAGTGGGAGCCCCTAGCGTTAAGGAGTGAAGTTCTTACCCACTGACTCCTTAGATGCTAGGAAGATGACATGGCTTGAACGCCAAACAAGTTCGCATAACAATCGTTCCTCTCCCTCCTTTACTTGGCTTCTATGCCTGACAACCTGGGAGGGAAAACTTAAAACGTAAGTTGAAGACTTAGTTAGTGAGTGATGGGTTTAGGAAAACGTTTTTGGGAATACAATAGATTAAATAACAACAATAACAATAGTAACAACATCAACGACAACTTTAAGCTTCATAAACTTGAGCTTTTTATCGCATCAAACACAACCACGACAATTACAACGATTCCACGCGATTCAAGCCATCAGAGCAGTCGCTACTCATCACCGGGATCTGGGATTCACACTCACCAGCTTCTCGTGATTTACCTGGGATTTCCACTAGTGTCTTGTAATTTTCAATCTCTTCCCTGACTTGGGATTCACTTTCATCAGTGTCTTCACATATCATTTCTCGCTTAGATCTAGGATTCACTTTCACCAGCATTTAGCATTTCAAGAACACATCTCATACTCGCTCAGACCGAGGATTCACTTTCATTTGCATTTACCCACCTAGACTTAGGATTCACACTCACCAGCATTTTGCTTTAAACCTGGGATCTCCACTAGCATCTTGTGATAGATTAGTCATCATTACTCATCACAACACTAACATCACAACACTAACATCACAACACTAACATTACAAGAGAGGCGTTAGCTCAACATATCACTTTCAACGCATAACAAAGATATGACAACAAACATCAATGAAAGGATTACAAAAGAATGCTATTCATACAACATTCATAAGATACTTGCCGGTTTGTCAAGATCATAATTTTCAACGCTTATGTTATAAACAACATGCATTCATTTAGAAGGATGTGAAATCATTTACAATAGACATTCATTTTATAAGGATCACTCACAACAACACTTAGCCTAAACTCTTTCTCCCCTTAGCTTCTGGCTTCTGGCTTCCTCTTCTTGCCTTGTGGTTTCCTTCAACTGGCTTTCGAAATCTACTCTTAACAACTCAGTAGAACGTTTAGCAAATGTCATTCCCTTTTTTATCTGGTCTTTGGTCCTATTTATCGTGACCTTTCACATCCAATGGTCATTTTCTTGCTTTACATATGTCACCTTTTCATTTCGCCGTGTTCTGCAGCCAACTCAAACTTGACACTAAGCCAATAGACATTTTCCTTGAAACGCTAAACTTCTTTAAGTCGCTTGGCTCTCTGCTCGGGAAACATCAGATTTTTACTCTTCCTCAGAGGGTCGTCTAGTCACTAGGACAGTTGTAGACAATTTCTCTGTAAAGATCCATTTCCTATCAATGAGGGGAAGTTTGTTAAAATAGGATGCGACATTCACAATGCTTGCAATCATGGATTTGTTTTCTTAGAGTATAGAGGCGAGAGGCATTTTGATGCTTTAAATAAAGTTTTTGAGTCGTGCCCCATATATCCTTGGCAGTCGCAGCGTACAACAAGCGCTTGCCAATTTGTGGCTCCATTCTAGTGATTAATATGGCTTGAATGAGAGAATCTTTCCCTTTCCAAAAACGTCTTGGGAATCACCTGGTGGAGGGTGAGGTATCTCTTCTGTCAGAAAGCCAAATTTGTAGCGCCCCTTTAAGACCATTTTAATGGATTGTGACAGAGAAGTAATTCTGACCATTTAGCTTCTCCACTATAAAGACTCCTGTAGTTTCTGCCACAGAACCAGACATGTGAGTAGAAGGCAAATTAGGGAACGAAATTATCAGATTCTTAGAATACATCGGTGAGTTGGTTGGGATGACAAGACTAGATGTGTGTGTAGGGGCTCCAAGGGCTACCTCAAACACTGCAAGTTGCTGCTGAAACATAGCCGATTGTTATTGGGTGGTATCTTGTACTTTTTGTTTGAATTGGGCCGAGGGCTCACCAACTTCAAATTCTGATTGGTTATGAAAGTTACCAACACTGCGATGACCGTTGGATAGGTAGGACATAGTGTTGAGGAAGAAGTGGGTTTGGTTGACCTAGAGTTTGCGGTTGCACCAAGGATGGTGGGTTCATGTGTAGTGTTTGCGGCGGGGGCGCAAAAGCAGTGGAGTGGCTAGTTTTGGAGCGGCTACTCAAGGGCAGTATGGGGATTTTGCTGGGTTTGCTGCGGCGCATGGACAGAAGGGTTCAGCAGCGGCTTGTTCGGCTGTGGAGGAAGCTGAGGGGCGTGCGGTTGGAGGAGAGTACTGGTCGGTGTGGTCTGAAGGCGGCTTGTTGGGTGTTGGCGGCAGCGGCGATGGTGGCACTAATACTGGCAGCTGTCTTGCCTGACAGTGTGGTTTTCTGGAGGTTTCAAATTGGATTCCCAGGATTTTTTTTTTTAAGAAATCTGAACATGTGGCTGTGGATTAGTTACAACTCTATTTTAAACGACTTCAAATAATGATGGCTTTCCTACCCCTCATGGTTGTGTATGGTTAGGCCTGGTCACTTCTTTATGATAAAACTAAATGCCTTCAAGGTTAACAAATCATAGAATAGGGAATCTTTAGATAATTTCAAAAGAGAATTATGTTGCTTGATTGGATGGAAGAAAAAGGGGACCTTGATCGTAAAATGGTACAAAGAAATCCAGAATACAAGCTGATTTTCCCTCGACTGGTGGTGAAATATAACACTGCCTCCCTGTACAAGATTTTTCGCAATATATGATCGTTTTGGAAGAAAGCTTTGGATTATGTTAGGATTCTTAACCTGAAAGACAGAAAATTCCCAACAAGACAAAACAGAGGCGGTATTCTGATATAAAATATTGATAATAAAGATCAAAATATACACAAACAGATACCAAAAAATCCTGAAACCAGTAACAATAATAATGTCCAGCACCTTCGAGAAAGCTGGAAACTTCTCCTATGAAAGCTTGAAAGCTTTCACCCACAAAGACAATATAAAACCAATAAACAGCAATCTCTAAACATTCTCTATAAATACCCCAATCCCACAAAGGGCCCACGTTGATGTTTTCTTTCTCTCTCTGTCCCAGAATTACCATCAGCACTGTCATCTTTTATGTGTATGTGATATTGGGGTCTAACATCATCGCTCAACTTGAAATTCACCTTGTCCTCAAGGTGGAATGTGGGAAATTGTTTGCTTCATTACTTGTACTGATTCCTAAGAGGCTTCGCCATCCGGTAACCCCTTCCACTTCACTAACCACTCATTTGCGGCTGTCTCTCTATTTCATTGGATTCCCATGACAGTTTCAGACCTCAATTGCAATTCAAACTCTTCAGTCAACATAGGAGAGAAGTGTTGGACCCTTTGTGTTTGGGCCAATTTAAGTTTTAGTTGGGATATATGGAACACATAATGGATGCATGTTTCCGGTGGTAATTCTAGACGATATGCCACTTCATCAATTCTTTCAGTTACTCGGTAGGGTCCACAGAATTTTGAAGTGAGATTTTCACTTTTTTTCTTTGCTAAAGATCTTTGCCTATAAGGTCTCAACTTTAAATATACTTCCCCACGTGGAAAGTCAATTCTCTCTGATGTAGATTGACTTGCTTTTTCATTCTGTTTTGGGCCACTACCAAGTTTTCTTTCAATTAGTTAACTATTAAGTTCCTCTTCATCAACAGTTGATCGGCGTTGTTATTAACTGTTCTTTTCTGTCCATAAGAAATGATTGACGGAGGAGGTCTTTCATAAACAGCCTGGAAAGGTGTGGTTTTTTGTGGAGCTATGAAAGGTGGTGTTGTACCACAATTCTGCACATGGGGCACACTTGTTCCATTTTCCCGGTTGCTCATTACAATAACTTCTCAGAAAGTCTCCAAACACCTATTAACTCGTTCAGTTTGTGGATGGAAGGCAGTGCTTCTCTTTAACATGGTTTCCATGGCCGAAAACAAGGCTGTAGAAATTACTCAAAAAATTCTTATCCCTATTGATAATGTTGATTTTGGTATTCCTTGTTTACTCACGACCCTATCAATCAATACCTCCGCTACTTGTTTTGTTGTAAAGGGGTGTTTGAGAGGAATGAAGTGGTTTTGGTATCCCTATTGATGATGTTGTTATACGACCACTAAACTTGTTTTTAGAGATAAAGTCTTTTCTAAAAAGTTTCAATCCACCCTATCAAAGTCTTTTTCCGGATCAAGTTTTAAAATACAGCCCTTTTTCCGTTTTGCCTTATAATCTTCCACTGCCTCGTTAGCAATTAATATTGGGTCAAGAATCTACCTACCTTCAGTAAAAGCGCTTTGGATAGGACTTATAATTGCATCCATAACTTGTTTTAGACGTTTAGATAGAACCTTTGCAACTACCTTGTATGTTAAGGTAGTGAGACTGATTGGATGGAAATCCTTGACTAGAGTCGCATTCTCTTTTTTCTGCAATAAACAAATGAAGTTTTCTTGAATGTAAGCATTTAATCTTCCATTTATGTGAAAATCATCCATTAAGGATTTGAAGATATCCTTGAAATTAGACCAGTATTTGATTAGGAACTCCGCTATGAATCCATTCGGGCCCGGGGCTTTATTGCTGCCAAGTGCCTTCAAAGCTTTAAAAATTTCCTCCACTAAAAATTGGGTAACAAGAGCCACATTCTGAACTGAGGAAACACAAGACCAATTGCTATTAATAGCTATAAATCTGCTTCGGAATTCTTGTATAAAGTGTCTGAAAAAATTGTAGCCCAAGCCTTTCAATGTTGCAGAATGAAGTTGAAGCGACCCCATTATCATCTTTTAATTCTGTTACGAGGTTCCTTCTTTTCTTTGCATTTAAAAAGTAGTGGAAGAAACCCATATTCTCATCACCCAAAGGCAGCCAGTTGAGCTTACTTTGAATATAATTACGCTCTTCATTTTGGTAAATGCCAAGTAATTCAGCTTGCAGTGTTGTTCTAGAACGATCTCTTCTTCATTTAACCCAAACAACTCAGCCACAGAATCATATTTTTCTAATTCTAACAGCAAGATTTTCTTCCTTTTACCTTGGCTTGCGCTGCAAAATTCCAAGCTTTTACTACCATTTTAACTGATCTCAACTGTTCATGAAGAATGAAAACCGGCCCATCCACGGAAGTTTGAACTACCCACTGTTTCTGCAATAATCTGATTACATTTTCTGGACAGCAAACAGCTATTACAAAACCGAAAAGGAGAGGGACCCCAAAGAAAAGCACCACCCTCCAAGATTAAAGGAAAGTGATCTGAGAAGATACGTGCTTTGCGTGATACTCGAGAATTTTCAAAACGAACATCCCACTCTTGATTTATGAAGAATCTGTCTAATAATGATCTGGAAGGAGAAATACCATCTCTAGACCAAGTGAACCTTCCATTTTGCAATGGAATTTCCATGAGAGTGGCCGAATAACTTATTGAACAATGACATTCCTCTAGTGCTCCTGTCAATTGGAAATATTTCATGGGCCCAAGGAGTGATATTAAGATCCCCACCTACACACCAGGCCACTGCCGAACAAGTAGTTAAGGAAGACAATTCGGGCCAAACTTAATTTCCTTTCTCTGTATCCACGAGGGCCATAGACATTTGTAATCCAACATACTTTAAAGTGAGGCATTTGATAGACAGAGAGAAGCGCCTTTTAATAACCTCAGTTACCGAGATTTTACTCCTGTCCTACATGGTAAGAATTCCCCAGAAGAACCAACAGAAGCCACAAAATCCCGGCCAATATCCTTAGAACTCCATAGTGATTTTATGAAAACTGAGTTCACTGTATCCTTCTTAGACTCTTGAATTATGACTACATTCGGATTACAATTTTTGATAAACTTTTTGAGTGCTGCACGTTTAGAGGAATCATTCAAACCCCTAGTGTTCCAGGAAACAATCTTCATAATGGCTTGGAGAAGGAAAAGGTGGCTGCACTTCTAAATTAAGCCAGAATAAGACCACAATCACTTACTATAGATACCAAATCTTTAGGCAAATCCATTGGAATTTTATTAGAGGGAAATTCCTCATCATTGAACAAAGCGTTCAGGTCCGCCCCTTCAATTTCTGAGTCTAGTTTAAGGTCAACCTTATTGCTGGAATCAACTGAATCTTCACTACTAACGCTGATTGGAGAGGAAAATTCAAGCTGGTTTTTGAGAGAAAAATCATCTTGGGCAGCCTCACAGAAAAGATGCCTTTGAATTAGAGATGGTGGATGGAAAATTGAGACACTTGAAGAAGAATCAACATTTACTGACCTGATGAAGCATTCTGGAACCTGAATTTTAGAGCTGTACACTTCCAGAAGATCCAGGTTATTGGCAGAAACAGAGTGCTTGCTGAGGTGGTTCCGAAGAGAGTCCAAAGAGGGATTTTTAAGATCACAAACCCCACTAAATTCAGATTTTAGAACGGCAGTCCACACATTGTCGAAGGAAGTTTGTTTGCGGATAGAATGCTTAAGAATTTTTGGAACATGAGAGGCTTTACTACCTTTGGCATTCTTGAAACGGTTAGAAAAACCGAAATCTGAAGAAACTTGACCCCTTGGGCAAAATTTGTTATTACTCAAAGAGTTATTGAAGTGGGCTCTTTTTTCTTTATTCCCCTCATTTGATAATTTACAAAATGCCTCTTCAACTGCCGGAATAATAAAATTACAGTCATTAAAAGTGGATCCCACTTCCTTTTTGCTACAGCTGTCTGGCTTGGGTTCATCAAAATTAAAGAATTGGGGCTGTAAAGCTGGCCTCACATTTAATTCTTCTACAACATGGCTGCCGGCTGCTATATTAAGTTGGAGAGAATCTGAGTGGGGAGAGCTTGATAAACCGTTTGTTGCAGCATTAAATGGCAGGCTGACTATCTTTTCAATCTTCGAGGACTGATTTTCTCTCTCTTCTGGTGCTGCCTTTTCGTCTTCTAAGTGTGTTAAAAGACCATCTGCACGCTGATTTGAATTATTCCCTCTGAAACAGGGCTTTTCCGGCAGAGATTTAAGGACAGGTTCACTTTCTGGCCATTCAAGATCTTCATCTTTTCCCCCCAGCTTCCTTTGTGCCTCAAATGGGTTCCTTGAGATGGATGGAGCATTTTGATTGAGGAAGTTCCAATTCTCTGGAAGGCCATCCCCTTGTAGCTCTTCATCAATAATTACTCAATTTAGTCTACATAAATCAATAGGATTGGAAAAATCACTAAGAAATAAGTCATGTTAAACAATTACAGGGACTTCTAATGGTTCAAAATCCCCAAAATTAAGGAAGAAATTTCCACGGGTCTCCCTCTTTATTTCTATAGGTGCTGGTAAAAATCCACACAGATTTTTTCGAACTTCAATTCTTGCTTTTGAGCACTTTATCAAATTAAGTATTTCTAGAGCTATACTTTCCAATCCTCCAAAGTAGGCCCCAATTACTTCAAAAATATTTCTTCTCCATAAGTTGAGAGGAAGATTTTTAGTTGACAACCATCCTCCGAAACCTTCAATAAGAGTTGATTTGTTGTGTTTAGCATCGTTCCATTTTTCGAATAACAGATTGAAATTTTCCGTAATTGAACCATTTACCCTGAGCATAAATCATGTCTTCAATTCTTCCTTGGGTAACTTTAATGATGGCTTTGTCTCCAAATAAAGGATTGACACTGATTTTGGCTTGAAATAGGCCTTCTAGATGTGACACAATGTCCTTCCAATCATAAAAAATGAATAGTCTATTTAGAACCCATGGGTTATTGAAATCTTCCTCGAAAATGTCTAACTTTTCCACACCCAGAAGATATCTAAAATGTCTTAACTTTTCCACACCCAAAATTTATCTTCTGGTTGCAAAGCAGAATGATTTTTCTTAAGAGAGTGGGTAAGATTTCTAGGGGTAAAAGCCAAGCTCTGTTTTCCTGGAGTGAAAATAGAGTATATATTTTTCTTTGGAAACTTTACTTTGTCTGCCTAACTTGAACCTGACTTTGAGAGAAGGGAGGCCTGCGGTTTTGAATGGGCAGATTCGAATTGGAGAGAGGAGTGCCATGAGGTGTAATTATGAGTCATAAAAAAGGACCTGATCATATCATGAAAGGAAAACCAACCTTGCCACGATTCTCCTTAGTAAATATGGATGAAGGATTGTATTCCAGAGGTACTACGAACAGCACACCTTATGAACCAACCAGATGGAGTTAAGAACTTGGACAGTCTTGTTATTGCAGCACATCATTCCCAGATTTGCTGAAGAACTTCTAGGCTGATTCTTTGACTAGAACCGCTATTGAAATAATGAACCATTCCAATTGAGTCTTGGATAGACGGATGATTTTCTGGAAATCTACATCTTCAATGTGGAACCGCCTTTTTCGAACCATATGTAGTAGAAAGAGTCAACAATTTTGCAACTTTTAACTTCCATTTTTGGAAAAAATGGTGCTGGGGCTTCGGAGTGAGGGCCGCTTAGGGAGTTAGGAGAAGACATGACCGGAGATGCTGTGGTTGGAGTGAGAGGAGAGGAGGGTGGGTAAGAGGAGAGAGGAGGGAGAGAACTTACCTTTTCAGTACTCCGTTCAATTTGCGATAATCAATGCAGAACCTCCACCATCCATCCTTCTTTTTAACTAAGAGGACTGGACTTGAATAAGTGCTTCGGTTTGGTCTGATTATTTTAGCCTTCAACATTTCCATCACCAATTTTTCAGTTTCCTCTTTCTGTGTGTGGCCATATTTGTATTTTGACATCAATCAGTTTCTATTCTTCCAAGGTTAATATTCGATGATCCATTTCACGTTTCGATGGTAGTTTTCCCAGTGCTTCGGAAACATCTTTATAGTGATGCAACAATGCTTGAATCATTAGGAGACCTTCCTCTTCTCCTCTTTCGCTCGTTTCACTTTCTGCCTCTTCGCTTTTTTCATTTTCTTGGTTCTGCACTTCCACCAGATATCCACGATCTCCTTCTTCCCATGATTTAGTTAGAGTTTTCAAAGAACACTCAGCTGTGACTAGTGACGAGTCCCCATGGAGTATGATCGTTTTCTCTCCCATCATAAATGCGATCGACCTTGATGGTTAGTGTATACTCATAAACCCTTTCGAGCACAAGCAGGGGATGCCCAAAATTACATCCAATTGTCCCAAATTGATAGCCAAGAAGTTTGCCTTTATAGTCACTTCAGTCAACACCAGCTCCACCCTTCTGCATATGCCTTGTTCGAAGATGGCTGTTCCTGTCACCGAAGATGGCTGTTCTCATCACCAATCGTTACCCCAAACTAGGATCCTTCCATCATTGGTAAGTTTAACTCCCGAACAATATTCTGATGAATGAAGCTATGCGTGGCTCCGCTGTCGATCAAAATCACCACCTATCCCTTTTATTTTTCCCTTCAGTTTTATGGCCCCTTTGTCGGAAAAACCATGTAAGGACCTCAAGGAGATTTCCACATTGTCTCCTAGCTCCATAATTTTTCAGTTCCACGATTTCATTAGCCTCTGTTTTGACTTCTCCTTCTTCCTCGAGTTCCACTTTGACATTCGTAATATACAACCTCAGTTCTCTATTCTCTCTCATCTTGCCCCAGTGTCCTTGTGACCATTTGTCGTTACACCTGAAATACAGACCTTTATCAATCCTCATTTGTAACTCACTATCTGAGAGTCTCTTCGTCGATGCCTCCCCCGCTTCTTTCTTTACGAAATTCCCACGTGTGTTTAGAGTTATTTGTCTGGTTTGGGTCTCCTTGTCTTTTAATTCAGATTTTTCCATCTGGGGTATAGGGGCTTTCGTCAGCTGGGCTTTCATCGTATTAGCCCCTTGAAGCCCCAACTCATTCAAAGCCAGATTTTTGTGATCGTTCACCAACTGGGCTTCTCTCATACATTCATCCTTCTTCTTCGGATGCCGACTTACCACCTCTGCCCTCAGTTCCGGTGACAGCCCCATCACAAAGGCATCCATAAATGTGCTTTCTGCCATGTTTGGTGAGAGAGCTGAATACTTCAGAAATTTCTTCACATGATCTCCATAGGAACCATCTTTTTGGATATGGATTAGTCTGGCCCCCAAACTACCTTCCTCAGCCGGTGGTCGAACATTTTCTGTTTAAGGTCTTTCTGTTTAAGGTCTTCCCAGGATGTGACCTTCCTATTATTATTCCAATAGGACCAATCGACTTCTTTTTGCCCAAAGCTTACCACTGCCACTTTTACTTTCTCACTCTCTGCTAAGTCATTAAGTTGAAGAAATGCTTTGCTTGATATGCCAATGATTCCGGGTTCACCCAATTGAAGATTGGCATCTCAAGTTTTTTGTATTTTCTTTTATCTGAAGTCACATTTTCCATCAATGGCTCAGATTTCCCTTCTTCCATTTTCCCTTTTTTTCTTTAATACAGAAGCGTCCGGGGTTCCAGATTCTTCTCTATGTCTCATGGCCGTGCTCTCCTTTATCTTCTCAGTAAGTTGTTCCATCCCTTTTGTTTAATCCGATCAGTTAACTCTCTCAACTCCTTAACTTCCTTTTCATTGGATTCCATACTCTCTTCCTGTTGTTTTCGAGCCATAGACGTTGTTCTCCCAGGATGTTAAGGCTTTGTTACCAATTTGTTAGGATTCTTAAGCAGAAGATTCCCAACAAGACAAAACAGAGGCAGCACTCCGATATAATATATTGATAATAAAGATCAAATATACATAAACTGATACCAAGTAGTCCAGAAAACAGTAACAATAATGTCCAGCACCTTTGAGAAGGCTGGAAATTTCTCCTATGAATGCTTTCACCCAAAAAGTCAATATAAAACCTAAAAACAGCAATAACTGAACATTCTCTATAATCCCACAGAGGTCCCACATTGATGTTTTCTTTCTCTCTCTGCTCCCAGAATAACCATCAGCACTGTCAAATCCCTTTTCTGCCCCTTCTTTTATATTTATGTAATATTGGGGGTCTAACAGATCACAACATTCAATTTTAAGTCTTTCTGATCAAATTGCCATCCCTAACTCTTCTCACAATTGAGCAACAGAAAAGATTCTTGATGTAGATTACAAAACCATGCAGAAGAGGAAGAAATGTTCAAGAGTTAACAGTGGATATGAGATGTAAAGGAAAAGAAAGGGAAACCATAAATGGGTATCAGTATAGCAAAAAGCTAAAATACTCGAATTTTATTGAGCCAGGATTACAAAGTGGACCTTGGGAGTTAAAATTCTATATAGTATGTAGAAGTAACTGCCAACTGGCATGATTCTGAAATTTAACATCTGGAACTGAACTTATCCATAAGTTTCATCTGTCCTATTTAACGTTTGAAGATTTTCACTGATTTCACCTAAAGTAATTACTTCATCTGAGTTTGTAAGAAGTAATCTGTATAAGATTGATTCTCACTCTTTTTGCATTTCCAGTTGTCTTTCGATATCAGTCAGTATTCTCAAATTCCTCTAGACCCTCTTTTCTTTTCTTTTTTTTTGGCAGTTCTCCATTTGCTCAATGTATTTGACCTTTATGCAACAAAGGTCTGTTTGAAATGATATTTTAAATGTTCAAAGAAGTGTTTGTAAATTACAAACACAAGTATTTCTAAGCATTTAGAAAGTACTAAAAGAGGCTCTAAATACTATCGTATGCATTAAGTCTTATTGTTAAGACTTTGTTTGATAACCTTTTAGTTTTTTATATTTTGGTTTTTGAAATTAATCTTATAAACAGTACTTGCACTTTTGAGTTTCTTTTGTTTTACAATCTACTTTATCACAATGTTTTCAAAATCCATGGCAATTATGGAAACTAAACAACGTAATTTGAAAAAACTTTGTTTCTGTTACTGGAATTAGTCATTTTTCAAAATTAAAGCTAAAACTCATATGGTATCAAAAGGGGCGGGACAAATAGTTGACAAACGAAGCAATAGGGAAAGAAATTATAAACCTGCCAAATCCTTACTAACAAAATACATGCAAAAAGGCTGGAAGTCTTGAAGATCATATTATCTGCTTGAATTATTGCACTGGCCTTCATATTTGTTATTTCGTGATGATGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTGTTCTGCAACACTCTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCACGGAGAGGTGCCTGCACAGAAGAGGTAAGGAATTTCCACGATGAACTCCATTGCAATCTTATAAAATATACTCCAATGAACTCCATTGTAATCTTATAAAATATACTCTACTTATTGACAATGTTTCTAGCTGTTTCTTGATGTTCGTTTTGGGCTGCATTTAGTGTACTGGATTGGTGGGAGTTTTTTTATTCCAGAAGAAAACATACATTTTCGTTGATACAAAAAATTATAAAGAAACTGCTGTGACGTACATGGAAAAAAACAGCAAACAAATTCAGATTTTCATACGCATAGATATATTTTTGTCTACAATGATCAAGAAGCAACAGATTTAAACCTGCAGCAGAGTTTCCCCATTTATTGTTTTATTACTGTCTGAGGAATGAAATTAGACGGTATACTGTTTTAATACTGTCGGAGGAATGAAATTAGATCTCTGAACTTGAAATAGGAAAAAAGAGCAAATGAAGATTTCTTTAAAACCAGTCATCGTAGGACTTAAGCACAAATGTCATAACCCATGATTTGCACATGTCTTTTGAAATCAGGGTTGAGAATCTCAAGAAGTTCAAGAGTGATGATGGCGATTGTCCTACATTAGTCTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCTAATTCTGTAGGAGTTATTATCTTTTGAACAGTTTGGATTGTTTATTTTCACTTCTTTCTATGGCTATACTTTTCATTATCTTGCCTAATTAGCTTATAAATGATATTTTGTTTTGCCTTTTAGATCGACTACCTTCATCGCACTGGAAGAACCGCTCGCATGGGTGCAAAAGGTTTTTTGCTTGCTCTATGTGATGTACTTGATATTTTGTAATTCTGTTATTTCACATGGATTTAACTATATGTCCACTCATTGGGTGACTAGGAAGGAAAATACTTGAGCCTAACCACAAAATCAGTGAAAATGTGTTGAAATTCAATAACTGAATTTCCAAATTGAACTATAAAGTAACAAGTGTGACTTGAATTGAGCTTTACTCAAACAGTAATTGACATGACCTTATTTCCTAAAGGTCAAAAGTTCAATCCCTTGTCTCCACTTTTGTAAATAAAATAAGTAGCAAGTGTGATGAGAAGAATCGACTTACAAAAGTAAATAGCCTCATCCAACCATAATAATTCTTATAGCCATTAGTCTAAATTAATTAATTGATTGTCTTATCCAAAAAAAAGTACTAAATTTATTAAAGGTACAAAAAACTTCACCCTTTCCACATGTTAAGGTTGAATTTGATGAATAGGAAATATTAGGTAGAATTGACAGTTTGACACAATAAGGTGGAAGTTTTTTGAGCTAAATTACTTAACATTGAAGTTTGTGTATATTTAGTCTTTGACTTATGAAGTTTTGATAATTCACAAATCTATTAGACACGTGAACTTCTTTTCTAACTGGATTGTTTGTACATTTGTTGTAGGAAAGGTGACGAGCCTGGTTGGAAAAAAGGACGATATTTTGGCTACTCGCATAGAGGAAGCGATCCAGAAAAATGAGAGCTTGGAATCTCTAACTGCTGATAGCGTGCGGAGAGACATTGCACGGGATCGTATAACAGAGCATAAAACGAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGTAGAGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCTAAAGGTGAAACTGGAAAAGCATCATATTCAGAAAGGACCCAGAAGCCTGGTGTTCCAGTTTCTAAGCTTGTAAAATCGTCGAGGAATATCCCAAGAAAACCATCTTCCGAAACGAAGAAGCAAGTGGCTAGCAGAAGGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTTTGATAAGAGACGATCAGTGTCCAGTTAAGTGGAAGTCAGGTTTAAGATAATAATTCAACATAGTTGTATTTATATAAACTTCGGTAATTTTTTGTTTTAGTTCTTCAATGTGAAATGGCTTGAGTGCTAATTTATTGTTTTAGGAGTTCTCAATGGGGAAATGCCTGGATGAGTGTAAATCTGAGTACAAATCAGTTACAATCTTCCCAAGTCTCTTTTCCATCAATCATTTTCCTTTTTATTGTAATTTTTCTGTTTTGTGGATGGAAGCCACATTATCTTAAAACAAATTTAAAAACCGAATAATGTATGAAAAATCACTTGCTTTCTAAAAAGC

mRNA sequence

TTCTTTCGGAAAAAAATCCAAAATATCAGGGGTTTTAGTTAGCAATGTCTTACCATGAAGCTAGGAAGATGGGAGAGCAATGAGGCGGCATAATAAAACCTCCATACTTCTTTTCTTCTCTACCATTCACTTTGCCCCGTCTTAAATTCAAGGCGAAACTTCTTCTTACACCAATTGAGAATAAAAAATCGCCATGGGAGGTACAGGAAGGACTCTCCTCTCGCTTTCAATCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCTAAATGTCTTCCACTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTCTTTCCTCTGCTACTACCGCCACAACCTCCACTGAATCCACGGAAGCAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACTAAGCCAACCAGAAACACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAACAAGAAGTTGGTTGAAAGTTTTGAAGAGTTGGGTTTAAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAAGTTCCCACTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGAAAGAGTGTGATTTTGGGTTCCCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAAGTTAATGAAGCCTAGGCGTCCTAGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTGTTTCGTGTATCGAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTCAGGCAGGCAACATGGTCTATGGTGACATCAAATACTTGGTGCTTGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCTGACATTCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTGGTCACTGCAACAATGACAAAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTGTTCTGCAACACTCTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCACGGAGAGGTGCCTGCACAGAAGAGGGTTGAGAATCTCAAGAAGTTCAAGAGTGATGATGGCGATTGTCCTACATTAGTCTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCTAATTCTATCGACTACCTTCATCGCACTGGAAGAACCGCTCGCATGGGTGCAAAAGGAAAGGTGACGAGCCTGGTTGGAAAAAAGGACGATATTTTGGCTACTCGCATAGAGGAAGCGATCCAGAAAAATGAGAGCTTGGAATCTCTAACTGCTGATAGCGTGCGGAGAGACATTGCACGGGATCGTATAACAGAGCATAAAACGAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGTAGAGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCTAAAGGTGAAACTGGAAAAGCATCATATTCAGAAAGGACCCAGAAGCCTGGTGTTCCAGTTTCTAAGCTTGTAAAATCGTCGAGGAATATCCCAAGAAAACCATCTTCCGAAACGAAGAAGCAAGTGGCTAGCAGAAGGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTTTGATAAGAGACGATCAGTGTCCAGTTAAGTGGAAGTCAGGTTTAAGATAATAATTCAACATAGTTGTATTTATATAAACTTCGGTAATTTTTTGTTTTAGTTCTTCAATGTGAAATGGCTTGAGTGCTAATTTATTGTTTTAGGAGTTCTCAATGGGGAAATGCCTGGATGAGTGTAAATCTGAGTACAAATCAGTTACAATCTTCCCAAGTCTCTTTTCCATCAATCATTTTCCTTTTTATTGTAATTTTTCTGTTTTGTGGATGGAAGCCACATTATCTTAAAACAAATTTAAAAACCGAATAATGTATGAAAAATCACTTGCTTTCTAAAAAGC

Coding sequence (CDS)

ATGGGAGGTACAGGAAGGACTCTCCTCTCGCTTTCAATCTCCACAAACCTCTTAATCAGTTCTCGTCTTTCACCTCCTAAATGTCTTCCACTCCTCAAAATACCAAAACCCTTCAGAAATTTCTCAGGATTTAGGCCTCTTTCCTCTGCTACTACCGCCACAACCTCCACTGAATCCACGGAAGCAATCCAGGTGATTGAACCCTTGAAGCATTCTCAACTGCTTGAGAGGCTGAGGACTAGACATCTCAAAGAATCTGCTCCTAAAACTAAGCCAACCAGAAACACTCTGTCCCAGTCTGTGGGAAGTGCGGAGGATGAAATGAAGAAGTCTGAAAAGAAGAACAAGAAGTTGGTTGAAAGTTTTGAAGAGTTGGGTTTAAATGAGGAGGTGATGGGGGCTGTGAGGGAGATGGGCATTCAAGTTCCCACTGAGATTCAGTGCATTGGAATCCCAGCTGTTTTGGAAGGAAAGAGTGTGATTTTGGGTTCCCATACTGGCTCTGGTAAAACTCTGGCTTACTTGCTACCCCTTGTTCAGTTGCTGAGGCGAGATGAAGAATTGTTTGGTAAGTTAATGAAGCCTAGGCGTCCTAGAGCTGTTGTTCTATGTCCCACAAGGGAACTATCTGAACAGGTGTTTCGTGTATCGAAATCTATCAGTCATCATGCACGATTTAGGTCTACCATGGTAAGTGGTGGTGGTCGGCTAAGGCCACAAGAGGACTCATTAAGTAATCCAATAGACATGGTGGTGGGGACTCCTGGGAGAGTCCTTCAACATATTCAGGCAGGCAACATGGTCTATGGTGACATCAAATACTTGGTGCTTGATGAGGCAGACACCATGTTTGATCATGGATTTGGACCTGACATTCGCAAGTTTATTGGCCCATTAAAGCATCGTGCTTCATCACATGATGACCAAGGATTCCAAACTATATTGGTCACTGCAACAATGACAAAGGCAGTTCAAAAGCTGATTGATGAGGAGTTTCAAGGCATTGTGCATTTACGTACATCAACTTTGCATAAAAAGATTGCATCTGCTCGTCATGATTTCATCAAACTTTCTGGTTCTGAAAACAAGCTGGAAGCCTTATTGCAGGTTCTTGAACCAAGTTTGGCAAAAGGAAATAGGGTAATGGTGTTCTGCAACACTCTAAATTCCAGCCGTGCTGTGGATCATTTTCTTGGTGAAAATCAAATTTCTACAGTCAATTACCACGGAGAGGTGCCTGCACAGAAGAGGGTTGAGAATCTCAAGAAGTTCAAGAGTGATGATGGCGATTGTCCTACATTAGTCTGCACAGACTTGGCTGCTAGAGGACTGGACTTGGATGTGGATCATGTCATCATGTTTGATTTTCCTTCTAATTCTATCGACTACCTTCATCGCACTGGAAGAACCGCTCGCATGGGTGCAAAAGGAAAGGTGACGAGCCTGGTTGGAAAAAAGGACGATATTTTGGCTACTCGCATAGAGGAAGCGATCCAGAAAAATGAGAGCTTGGAATCTCTAACTGCTGATAGCGTGCGGAGAGACATTGCACGGGATCGTATAACAGAGCATAAAACGAAAAATGCAAAACTGATCAAGGCTTCAACTGGGAGTAGAGCTAAATCAGCAACATCAGCGCCAAAATCTTCAAGTGTCCATTCTAAAGGTGAAACTGGAAAAGCATCATATTCAGAAAGGACCCAGAAGCCTGGTGTTCCAGTTTCTAAGCTTGTAAAATCGTCGAGGAATATCCCAAGAAAACCATCTTCCGAAACGAAGAAGCAAGTGGCTAGCAGAAGGCGGCCTGGGAGTGCCATCAAATCGTCAGGTCAGAAACTAAATGTAGTTGGATTTAGAGGCCGAAGCAACCAGTTTGATAAGAGACGATCAGTGTCCAGTTAA

Protein sequence

MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTESTEAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS

Homology

[Close]

BLAST of Cmc01g0012171 vs. NCBI nr
Match: XP_008461901.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo])

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540
           SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540

Query: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600
           KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR
Sbjct: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600

Query: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS
Sbjct: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 633

[Close]

BLAST of Cmc01g0012171 vs. NCBI nr
Match: TYK14098.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa])

HSP 1 Score: 1203.0 bits (3111), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540
           SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540

Query: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600
           KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR
Sbjct: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600

Query: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 633
           RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS
Sbjct: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 632

[Close]

BLAST of Cmc01g0012171 vs. NCBI nr
Match: XP_004139692.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KAE8646174.1 hypothetical protein Csa_016020 [Cucumis sativus])

HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 609/634 (96.06%), Postives = 620/634 (97.79%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLS+STNLLISSRLSPPKCLPLLKIPKPFRNFSGFRP+SSAT ATTSTEST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           E IQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKK KKL E
Sbjct: 61  ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVP+EIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SR 540
           SLVGKKD+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S 
Sbjct: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540

Query: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600
           AKSATSAPKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR
Sbjct: 541 AKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASR 600

Query: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           +RPGSAIKSSGQKLNVVGFRGRSNQ   RRSVSS
Sbjct: 601 KRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSVSS 634

[Close]

BLAST of Cmc01g0012171 vs. NCBI nr
Match: XP_038898304.1 (DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida])

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 587/634 (92.59%), Postives = 602/634 (94.95%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGR LLSLSISTNLLISSRLSPPKCL LL+IPKPFRNFSGFRPL SATTATTSTES 
Sbjct: 1   MGGTGRALLSLSISTNLLISSRLSPPKCLSLLEIPKPFRNFSGFRPLCSATTATTSTESV 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           E  QVIEPLKHSQLLERLRTRHLKESA KT P      +SVG AEDEMKKSEKK KKLVE
Sbjct: 61  ETAQVIEPLKHSQLLERLRTRHLKESASKTMP------KSVGRAEDEMKKSEKKKKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
            FEELGLNEEVMGAVREMGI+VPTEIQCIGIPAVLE KSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 RFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEEKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLM+PRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMRPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKAST-GSR 540
           SLV KKDDILATRIEEAI+KNESLESLTAD+VRRDIARDRI E KTKNAKL+KAS+  SR
Sbjct: 481 SLVAKKDDILATRIEEAIRKNESLESLTADNVRRDIARDRIMEQKTKNAKLVKASSERSR 540

Query: 541 AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASR 600
           AKS+TSA KSSSVHSKGE+GKAS + RTQKPGVPVSK  KSSRNI RKPSSE+KK VASR
Sbjct: 541 AKSSTSALKSSSVHSKGESGKASSTPRTQKPGVPVSK-SKSSRNIQRKPSSESKKHVASR 600

Query: 601 RRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           RRPGSAIKS+ QKLNVVGFRGRSNQ DKRRSVSS
Sbjct: 601 RRPGSAIKSTSQKLNVVGFRGRSNQSDKRRSVSS 627

[Close]

BLAST of Cmc01g0012171 vs. NCBI nr
Match: XP_022143665.1 (DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia])

HSP 1 Score: 1038.1 bits (2683), Expect = 3.1e-299
Identity = 559/638 (87.62%), Postives = 586/638 (91.85%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLL+ SR+SPPKC PLLKIPKP R FSGFRPL SAT  TT TES 
Sbjct: 1   MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKK-LV 120
           E  QVIEPLKHS LLERLR RHLKESA KTK  R+TLS SVG AEDEM K+EKK KK LV
Sbjct: 61  ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120

Query: 121 ESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
           ESFEELGLNEEVMGAVREMGI+VPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180

Query: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
           QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240

Query: 241 QEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 300
           QEDSLSNPI+MVVGTPGRVLQHI+AGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300

Query: 301 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
           KHRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360

Query: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
           SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420

Query: 421 NLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKV 480
           NLKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480

Query: 481 TSLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKAST-GS 540
           TSLV KKD ILATRIEEAI+KNESLESLTAD+VRRDIARDRITE KTK AKL++ S+  S
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540

Query: 541 RAKSATSA--PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQV 600
           +AKS+++A   KSSS+ S+G +GKA    ++QK  V VSK V SSRN PRKPSS +KK +
Sbjct: 541 KAKSSSAAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPSSGSKKPM 600

Query: 601 A-SRRRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           A SRRRPG AIKS+G KLNVVGFRGRSNQ DKR+SVSS
Sbjct: 601 ASSRRRPGIAIKSTGPKLNVVGFRGRSNQSDKRQSVSS 638

[Close]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 758.4 bits (1957), Expect = 6.3e-218
Identity = 423/630 (67.14%), Postives = 497/630 (78.89%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           M G  RT+LSLS+S++L   S++  P   P L++ KP R    FRPL SA  ATTS+ +T
Sbjct: 1   MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKP-RFHHAFRPLYSA-AATTSSPTT 60

Query: 61  EAIQVIEP--LKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKL 120
           E   V +P  LKH+ LLERLR RHLKESA   KP +   S  VG  E+      KK+KKL
Sbjct: 61  ET-NVTDPDQLKHTILLERLRLRHLKESA---KPPQQRPSSVVGVEEE--SSIRKKSKKL 120

Query: 121 VESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 180
           VE+F+ELGL+EEVMGA++E+ I+VPTEIQCIGIPAV+E KSV+LGSHTGSGKTLAYLLP+
Sbjct: 121 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 180

Query: 181 VQLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 240
           VQL+R DE   GK  KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG R+R
Sbjct: 181 VQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIR 240

Query: 241 PQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 300
           PQEDSL+N IDMVVGTPGR+LQHI+ GNMVYGDI YLVLDEADTMFD GFGP+IRKF+ P
Sbjct: 241 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 300

Query: 301 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 360
           L  RA   +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTSTLHKKIA+ARHDFIKLS
Sbjct: 301 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLS 360

Query: 361 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 420
           G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RV
Sbjct: 361 GGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRV 420

Query: 421 ENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 480
           ENLKKFK ++GDCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 421 ENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGK 480

Query: 481 VTSLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIK---AS 540
           VTSLV +KD +LA RIEEA++ NESLESLT D+VRRD AR  IT+ K ++ K I+     
Sbjct: 481 VTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQ 540

Query: 541 TGSRAKSATSAPKSSSVHSKGETGKASYS--ERTQKPGVPVSKLVKSSRNIPRKPSSETK 600
             SR K ++S+P + S   K    K+S S   + +K   P  K  K  R I +   S   
Sbjct: 541 RNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGS--- 600

Query: 601 KQVASRRRPGSAIKSSGQKLNVVGFRGRSN 624
           + +A+R + GS  +  G+KL+VVGFRG+S+
Sbjct: 601 RSIAARGKTGSD-RRPGKKLSVVGFRGKSS 616

[Close]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 2.1e-205
Identity = 402/631 (63.71%), Postives = 463/631 (73.38%), Query Frame = 0


Query: 27  KCLPLLKIPKPFRNFSGFRPLSSATTATTSTESTEAIQV---------IEPLKHSQLLER 86
           +CL L + P P       R   + TT TT+     A+             P +H  LLER
Sbjct: 9   RCLMLTR-PSPLLRLRLLRAALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLER 68

Query: 87  LRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVESFEELGLNEEVMGAVRE 146
           LR RHLK     T           G      +  +K+  ++V+SFEELGL EEVM A+ E
Sbjct: 69  LRQRHLKGVPAATPRPAQREKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGE 128

Query: 147 MGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLLRRDEELFGKLMKPRR 206
           MGI  PTEIQC+G+PAVL G SV+LGSHTGSGKTLAYLLPLVQLLRRDE + G  MKPRR
Sbjct: 129 MGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRR 188

Query: 207 PRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGR 266
           PRAVVLCPTREL+EQVFRV+KSISHHARFRSTMVSGG R+RPQEDSL+ P+DMVVGTPGR
Sbjct: 189 PRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGR 248

Query: 267 VLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVT 326
           +L HI+ GNMVYGDIKYLVLDEADTMFD GFGPDIRKF+ PLK+RA+   DQGFQT+LVT
Sbjct: 249 ILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVT 308

Query: 327 ATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAK 386
           ATMTKAVQKLIDEEF+GIVHLRT+T  K++A+ARHDFIKLSGSENKLEALLQVLEPSLAK
Sbjct: 309 ATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAK 368

Query: 387 GNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCT 446
           GN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPA++RVENL KF++++GDCPTLVCT
Sbjct: 369 GNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCT 428

Query: 447 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEA 506
           DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLV KKD  LATRIEEA
Sbjct: 429 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEA 488

Query: 507 IQKNESLESLTADSVRRDIARDRITEHK--------------------TKNAKLIKASTG 566
           ++KNESLE+LT ++VRR     + T  K                    TK+++++K +T 
Sbjct: 489 MKKNESLEALTTNNVRRAAVNPQYTSTKGRPSALKVVNQKGRRGVALQTKSSRIVKDTTS 548

Query: 567 SRAKS-ATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQV 624
           SR +S   S P+S S  S    GKA              K V+S++  P K SS + K  
Sbjct: 549 SRRRSPIRSQPRSKSTSS----GKA--------------KPVRSAK--PSKSSSPSPKVA 608

[Close]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot
Match: Q0DVX2 (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 7.5e-54
Identity = 136/407 (33.42%), Postives = 214/407 (52.58%), Query Frame = 0


Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SF+E+G ++E++GA+R  G   P+ IQ +    VLEGKS I+G  +GSGKTLAYL P+VQ
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRLRP 240
            LR++E        PR PR VVL PT EL+ QV    +SIS     FRS + +GG R + 
Sbjct: 301 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKT 360

Query: 241 QEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 300
           Q +SL   +D+++ TPGR L  +Q G +   +++ +VLDE D ++         +    +
Sbjct: 361 QLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYG-------EESFEQV 420

Query: 301 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
            H+  +      Q + VTAT+   +   + E F     +    +H+  +      +  SG
Sbjct: 421 LHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSG 480

Query: 361 SE-----------NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGE-----NQI 420
            +           NK  AL++++E S  +  + ++FCN + + R V++ L       +QI
Sbjct: 481 DDNEEKNPETAFSNKKSALVKIIEESPVR--KTIIFCNKIETCRKVENALRRVDRKASQI 540

Query: 421 STVNYHGEVPAQKRVENLKKF-KSDDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSI 480
             + +H  +  Q+R+ N+K+F      D   LVCTD A+RG+D  +V+HV++FD+P +  
Sbjct: 541 KVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPS 600

Query: 481 DYLHRTGRTAR-MGAKGKVTSLVGKKDDILATRIEEAIQKNESLESL 508
           +Y+ R GRTAR     GK       K   LA R+ E   K   L  +
Sbjct: 601 EYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDV 638

[Close]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot
Match: Q4IF76 (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP2 PE=3 SV=2)

HSP 1 Score: 203.4 bits (516), Expect = 7.8e-51
Identity = 124/369 (33.60%), Postives = 194/369 (52.57%), Query Frame = 0


Query: 117 KLVESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLL 176
           K VE+F+E G    VM  V+  G   PT IQ  G P  L G+ V+  + TGSGKTL Y L
Sbjct: 133 KPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCL 192

Query: 177 PLVQLLRRDEELFGKLMKP-RRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGG 236
           P +  +         L+ P   P  +VL PTREL+ Q+    K     +R R+T V GG 
Sbjct: 193 PSIVHINAQ-----PLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGV 252

Query: 237 RLRPQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKF 296
              PQ   LS  +++ + TPGR++  ++AG      + YLVLDEAD M D GF P IRK 
Sbjct: 253 PKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI 312

Query: 297 IGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFI 356
           IG ++           QT++ +AT  K V+ L  +  Q  + +   ++           +
Sbjct: 313 IGQIR--------PDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIV 372

Query: 357 KLSGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPA 416
           ++     K + +++ +E  +  K N++++F  T   +  +  FL ++    ++ HG+   
Sbjct: 373 EVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQ 432

Query: 417 QKRVENLKKFKSDDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARM 476
            +R   L +FK+  G  P +V TD+A+RG+D+ ++ HV+ +D+P+NS DY+HR GRT R 
Sbjct: 433 NERDWVLDQFKT--GKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRA 486

Query: 477 GAKGKVTSL 483
           GA G   +L
Sbjct: 493 GAMGTAITL 486

[Close]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot
Match: Q5B0J9 (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.9e-50
Identity = 132/401 (32.92%), Postives = 208/401 (51.87%), Query Frame = 0


Query: 107 EMKKSEKKNKKLVESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHT 166
           EM    +   + VE+F+E G  + V+  V+  G + PT IQ  G P  L G+ V+  + T
Sbjct: 127 EMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAET 186

Query: 167 GSGKTLAYLLPLVQLLRRDEELFGKLMKP-RRPRAVVLCPTRELSEQVFRVSKSISHHAR 226
           GSGKTL+Y LP +  +         L+ P   P  ++L PTREL+ Q+          +R
Sbjct: 187 GSGKTLSYCLPAIVHINAQ-----PLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSR 246

Query: 227 FRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFD 286
            R+T V GG    PQ   LS  +++ + TPGR++  ++AG      + YLVLDEAD M D
Sbjct: 247 IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLD 306

Query: 287 HGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHK 346
            GF P IRK I  ++           QT + +AT  K V++L  +     + +   ++  
Sbjct: 307 MGFEPQIRKIISQIR--------PDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDL 366

Query: 347 KIASARHDFIKLSGSENKLEALLQVLEPSLA-KGNRVMVFCNTLNSSRAVDHFLGENQIS 406
                    +++     K + +++ LE  +  +GN+ +VF  T   +  +  FL ++   
Sbjct: 367 SANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWP 426

Query: 407 TVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDY 466
            ++ HG+   Q+R   L +FK+  G  P +V TD+A+RG+D+ D+ HVI +D+P+NS DY
Sbjct: 427 ALSIHGDKQQQERDWVLNEFKT--GKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDY 486

Query: 467 LHRTGRTARMGAKGKV----TSLVGKKDDILATRIEEAIQK 501
           +HR GRT R GAKG      T+   K+   L T + EA Q+
Sbjct: 487 VHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQ 512

[Close]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL
Match: A0A1S3CFM7 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 PE=4 SV=1)

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540
           SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540

Query: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600
           KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR
Sbjct: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600

Query: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS
Sbjct: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 633

[Close]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL
Match: A0A5D3CSB8 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00130 PE=4 SV=1)

HSP 1 Score: 1203.0 bits (3111), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST
Sbjct: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE
Sbjct: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540
           SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRA 540

Query: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600
           KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR
Sbjct: 541 KSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRR 600

Query: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 633
           RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS
Sbjct: 601 RPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 632

[Close]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL
Match: A0A6J1CPE5 (DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC111013516 PE=4 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 1.5e-299
Identity = 559/638 (87.62%), Postives = 586/638 (91.85%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLSISTNLL+ SR+SPPKC PLLKIPKP R FSGFRPL SAT  TT TES 
Sbjct: 1   MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKK-LV 120
           E  QVIEPLKHS LLERLR RHLKESA KTK  R+TLS SVG AEDEM K+EKK KK LV
Sbjct: 61  ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120

Query: 121 ESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
           ESFEELGLNEEVMGAVREMGI+VPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180

Query: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
           QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240

Query: 241 QEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPL 300
           QEDSLSNPI+MVVGTPGRVLQHI+AGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300

Query: 301 KHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
           KHRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360

Query: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
           SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420

Query: 421 NLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKV 480
           NLKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480

Query: 481 TSLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKAST-GS 540
           TSLV KKD ILATRIEEAI+KNESLESLTAD+VRRDIARDRITE KTK AKL++ S+  S
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540

Query: 541 RAKSATSA--PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQV 600
           +AKS+++A   KSSS+ S+G +GKA    ++QK  V VSK V SSRN PRKPSS +KK +
Sbjct: 541 KAKSSSAAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPSSGSKKPM 600

Query: 601 A-SRRRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 634
           A SRRRPG AIKS+G KLNVVGFRGRSNQ DKR+SVSS
Sbjct: 601 ASSRRRPGIAIKSTGPKLNVVGFRGRSNQSDKRQSVSS 638

[Close]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL
Match: A0A6J1IQ01 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC111477141 PE=4 SV=1)

HSP 1 Score: 1035.8 bits (2677), Expect = 7.5e-299
Identity = 556/634 (87.70%), Postives = 580/634 (91.48%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLS+STNLLIS+R+SPPKCL LLKIPKP RNFSGFRPL SAT+ATT+ EST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSATTNAEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           E  Q IEPLKHS LLERLRTRHL ESA KTKP        VGS E++MKK EKK KKLVE
Sbjct: 61  ETTQAIEPLKHSILLERLRTRHLNESASKTKPV-------VGSGEEKMKKPEKK-KKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGA+REM I+VPTEIQ IGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENK+EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQ+RVEN
Sbjct: 361 ENKMEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKG VT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDR-ITEHKTKNAKLIKAS-TGS 540
           SLV KKD ILATRIEEAI+KNESLESLTAD+VRRDIARDR ITE K KN KL+K S   +
Sbjct: 481 SLVTKKDHILATRIEEAIRKNESLESLTADNVRRDIARDRMITEQKMKNEKLVKVSKERT 540

Query: 541 RAKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVAS 600
           RAKS+TSA K SSVHSK E+GKAS   +TQK GV VSKL K SRN+PRKPSSE KKQV S
Sbjct: 541 RAKSSTSAAKPSSVHSKDESGKASSPVKTQKSGVRVSKLTKPSRNVPRKPSSEPKKQVTS 600

Query: 601 RRRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 633
           RR+  + IK SGQKLNVVGFRGRS+Q DKRRSVS
Sbjct: 601 RRQSRNGIKPSGQKLNVVGFRGRSSQSDKRRSVS 626

[Close]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL
Match: A0A6J1F9C3 (DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443261 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 1.0e-295
Identity = 554/635 (87.24%), Postives = 581/635 (91.50%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           MGGTGRTLLSLS+STNLLIS+R+SPPKCL LLKIPKP RNFSGFRPL SAT+A TS EST
Sbjct: 1   MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSAATSAEST 60

Query: 61  EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
           E  Q IEPLKHS LLERLRTRHL ESA KTK        +VGS E++MKK EKK KKLVE
Sbjct: 61  ETTQAIEPLKHSILLERLRTRHLNESASKTK-------LAVGSGEEKMKKPEKK-KKLVE 120

Query: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
           SFEELGLNEEVMGA+REM I+VPTEIQ IGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180

Query: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
           LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240

Query: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
           EDSLSNPIDMVVGTPGRVLQHI AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300

Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
           HRASSHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS
Sbjct: 301 HRASSHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360

Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
           ENK+EALLQVLEPSLAKGNR+MVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQ+RVEN
Sbjct: 361 ENKMEALLQVLEPSLAKGNRIMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVEN 420

Query: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
           LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKG VT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVT 480

Query: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDR-ITEHKTKNAKLIKAS-TGS 540
           SLV KKD+ILATRIEEAI+KNESLESLTAD+VRRDIAR+R ITE KTKN K +K S   +
Sbjct: 481 SLVTKKDNILATRIEEAIRKNESLESLTADNVRRDIARERMITEQKTKNEKFVKVSKERN 540

Query: 541 RAKSATS-APKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVA 600
           RAKS+TS A K SSVHSK E+GKAS   +TQK GV VSK  K SRN+PRKPSSE KKQVA
Sbjct: 541 RAKSSTSPAAKPSSVHSKDESGKAS-PAKTQKSGVRVSKSTKPSRNVPRKPSSEPKKQVA 600

Query: 601 SRRRPGSAIKSSGQKLNVVGFRGRSNQFDKRRSVS 633
           SRR+P + IK SGQKLNVVGFRGRS+Q DKRRSVS
Sbjct: 601 SRRQPRNGIKPSGQKLNVVGFRGRSSQSDKRRSVS 626

[Close]

BLAST of Cmc01g0012171 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 758.4 bits (1957), Expect = 4.4e-219
Identity = 423/630 (67.14%), Postives = 497/630 (78.89%), Query Frame = 0


Query: 1   MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
           M G  RT+LSLS+S++L   S++  P   P L++ KP R    FRPL SA  ATTS+ +T
Sbjct: 1   MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKP-RFHHAFRPLYSA-AATTSSPTT 60

Query: 61  EAIQVIEP--LKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKL 120
           E   V +P  LKH+ LLERLR RHLKESA   KP +   S  VG  E+      KK+KKL
Sbjct: 61  ET-NVTDPDQLKHTILLERLRLRHLKESA---KPPQQRPSSVVGVEEE--SSIRKKSKKL 120

Query: 121 VESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 180
           VE+F+ELGL+EEVMGA++E+ I+VPTEIQCIGIPAV+E KSV+LGSHTGSGKTLAYLLP+
Sbjct: 121 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 180

Query: 181 VQLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLR 240
           VQL+R DE   GK  KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG R+R
Sbjct: 181 VQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIR 240

Query: 241 PQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 300
           PQEDSL+N IDMVVGTPGR+LQHI+ GNMVYGDI YLVLDEADTMFD GFGP+IRKF+ P
Sbjct: 241 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 300

Query: 301 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 360
           L  RA   +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTSTLHKKIA+ARHDFIKLS
Sbjct: 301 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLS 360

Query: 361 GSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRV 420
           G E+KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RV
Sbjct: 361 GGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRV 420

Query: 421 ENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGK 480
           ENLKKFK ++GDCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGK
Sbjct: 421 ENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGK 480

Query: 481 VTSLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIK---AS 540
           VTSLV +KD +LA RIEEA++ NESLESLT D+VRRD AR  IT+ K ++ K I+     
Sbjct: 481 VTSLVSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQ 540

Query: 541 TGSRAKSATSAPKSSSVHSKGETGKASYS--ERTQKPGVPVSKLVKSSRNIPRKPSSETK 600
             SR K ++S+P + S   K    K+S S   + +K   P  K  K  R I +   S   
Sbjct: 541 RNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGS--- 600

Query: 601 KQVASRRRPGSAIKSSGQKLNVVGFRGRSN 624
           + +A+R + GS  +  G+KL+VVGFRG+S+
Sbjct: 601 RSIAARGKTGSD-RRPGKKLSVVGFRGKSS 616

[Close]

BLAST of Cmc01g0012171 vs. TAIR 10
Match: AT3G06980.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-50
Identity = 135/411 (32.85%), Postives = 220/411 (53.53%), Query Frame = 0


Query: 120 ESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 179
           ++F E+G +E++M A++E     P  IQ +    V++GKS I+   +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433

Query: 180 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRLR 239
           Q LR +E        P  PR +VL PT EL+ QV    +SIS     FRS +V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493

Query: 240 PQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGP 299
            Q ++L   +D+++ TPGR    +  G +   +++  +LDE D +    FG D  +F   
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDIL----FGDD--EFEAA 553

Query: 300 LKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLS 359
           L++  +S      Q + VTAT+   +   + E F     +    +H+   +     +  S
Sbjct: 554 LQNLINSSPVTA-QYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCS 613

Query: 360 GS-----------ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL-----GENQ 419
           G            +NK  ALLQ++E +    ++ ++FCN + + R V++        E Q
Sbjct: 614 GDDNAEKTPETAFQNKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKERQ 673

Query: 420 ISTVNYHGEVPAQKRVENLKKFKSD--DGDCPTLVCTDLAARGLDLD-VDHVIMFDFPSN 479
           +  + +H  +  + R+ N+++F S   + +   LVCTD A+RG+D   VDHV++FDFP +
Sbjct: 674 LHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRD 733

Query: 480 SIDYLHRTGRTARMGAKGKVTS---LVGKKDDILATRIEEAIQKNESLESL 508
             +Y+ R GRTAR GA+GK  +   +VGK+   LA RI E  +K   +  +
Sbjct: 734 PSEYVRRVGRTAR-GARGKGKAFIFVVGKQVG-LARRIIERNEKGHPVHDV 773

[Close]

BLAST of Cmc01g0012171 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 188.0 bits (476), Expect = 2.4e-47
Identity = 123/372 (33.06%), Postives = 192/372 (51.61%), Query Frame = 0


Query: 107 EMKKSEKKNKKLVESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHT 166
           E+    K   K V+SF ++G  + V+  V++ G   PT IQ  G P  ++G+ +I  + T
Sbjct: 86  EITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAET 145

Query: 167 GSGKTLAYLLPLVQLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARF 226
           GSGKTL+YLLP +  +         L     P  +VL PTREL+ Q+ + +      ++ 
Sbjct: 146 GSGKTLSYLLPAIVHVNAQP----MLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKI 205

Query: 227 RSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDH 286
           ++T + GG    PQ   L   +++V+ TPGR++  +++ N     + YLVLDEAD M D 
Sbjct: 206 KTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDM 265

Query: 287 GFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKK 346
           GF P IRK +        SH     QT+  +AT  K V++L  +       +   +   K
Sbjct: 266 GFDPQIRKIV--------SHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLK 325

Query: 347 IASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTV 406
              A    + +     K   L+++LE  +  G+R++VF +T      +   L  +    +
Sbjct: 326 ANRAIRQIVDVISESQKYNKLVKLLE-DIMDGSRILVFLDTKKGCDQITRQLRMDGWPAL 385

Query: 407 NYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLH 466
           + HG+    +R   L +F+S  G  P +  TD+AARGLD+ DV +VI +DFP +  DY+H
Sbjct: 386 SIHGDKSQAERDWVLSEFRS--GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 442

Query: 467 RTGRTARMGAKG 478
           R GRT R GAKG
Sbjct: 446 RIGRTGRAGAKG 442

[Close]

BLAST of Cmc01g0012171 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 4.1e-47
Identity = 125/393 (31.81%), Postives = 199/393 (50.64%), Query Frame = 0


Query: 119 VESFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPL 178
           V +F E+ L E +   +R      PT +Q   IP +LEG+ ++  + TGSGKT A+  P+
Sbjct: 158 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 217

Query: 179 VQLLRRDEELFGKLMKPR-----RPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSG 238
           +  + +D+     + +PR      P AV+L PTREL+ Q+   +K  S+    +  +  G
Sbjct: 218 ISGIMKDQH----VQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYG 277

Query: 239 GGRLRPQEDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIR 298
           G  +  Q   L   +D++V TPGR+   ++   +    I++L LDEAD M D GF P IR
Sbjct: 278 GTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIR 337

Query: 299 KFIGPLKHRASSHDDQGF-QTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKK--IASA 358
           K +  +         +G  QT+L +AT  + +Q+L  +     + L    +     +   
Sbjct: 338 KIVEQM-----DMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQ 397

Query: 359 RHDFIKLSGSENKLEALLQVLEPSLAKGNR--VMVFCNTLNSSRAVDHFLGENQISTVNY 418
           R +F+  S   + L  LL     +  +G +   +VF  T   + +++++L  N     + 
Sbjct: 398 RVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSI 457

Query: 419 HGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRT 478
           HG+   Q+R   LK FKS  G  P LV TD+AARGLD+  V HV+ FD P++  DY+HR 
Sbjct: 458 HGDRTQQEREVALKAFKS--GRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 517

Query: 479 GRTARMGAKGKVTSLVGKKDDILATRIEEAIQK 501
           GRT R G  G  T+     +  LA  + E +Q+
Sbjct: 518 GRTGRAGKSGLATAFFNDGNTSLARPLAELMQE 539

[Close]

BLAST of Cmc01g0012171 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-46
Identity = 133/413 (32.20%), Postives = 201/413 (48.67%), Query Frame = 0


Query: 83  LKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVESFEELGLNEEVMGAVREMGIQV 142
           L  SAP ++     LS    S   E+  S  +    + SFE  G   E++  V   G   
Sbjct: 126 LPSSAPASE-----LSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA 185

Query: 143 PTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLP---LVQLLRRDEELFGKLMKPRRPR 202
           PT IQ    P  ++G+ ++  + TGSGKTL YL+P    +Q +R D  +         P 
Sbjct: 186 PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRM--------GPT 245

Query: 203 AVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVL 262
            +VL PTREL+ Q+   +      +R   T + GG    PQ   L    D+VV TPGR+ 
Sbjct: 246 ILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLN 305

Query: 263 QHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTAT 322
             ++   +    I YLVLDEAD M D GF P IRK +  +  +         QT++ TAT
Sbjct: 306 DILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR--------QTLMYTAT 365

Query: 323 MTKAVQKLIDEEFQGIVHLRTSTLHKKIAS---ARH-DFIKLSGSENKLEALLQVLEPSL 382
             K V+K+  +       +    + + +A+    +H + +     + +LE +L+  EP  
Sbjct: 366 WPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEP-- 425

Query: 383 AKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLV 442
             G++V++FC+T      +   L   Q      HG+    +R   L +F+S  G  P LV
Sbjct: 426 --GSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRS--GRTPVLV 485

Query: 443 CTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKD 488
            TD+AARGLD+ D+  V+ +DFP+   DY+HR GRT R GA G+  +  G +D
Sbjct: 486 ATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510

The following BLAST results are available for this feature:

BLAST of Cmc01g0012171 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461901.1	0.0e+00	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo]	[more]
TYK14098.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa]	[more]
XP_004139692.1	0.0e+00	96.06	DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-bo...	[more]
XP_038898304.1	0.0e+00	92.59	DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida]	[more]
XP_022143665.1	3.1e-299	87.62	DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia]	[more]

BLAST of Cmc01g0012171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X76	6.3e-218	67.14	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q5VRY0	2.1e-205	63.71	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0DVX2	7.5e-54	33.42	DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4IF76	7.8e-51	33.60	ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 1...	[more]
Q5B0J9	3.9e-50	32.92	ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38...	[more]

BLAST of Cmc01g0012171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFM7	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 P...	[more]
A0A5D3CSB8	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CPE5	1.5e-299	87.62	DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IQ01	7.5e-299	87.70	DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC1114771...	[more]
A0A6J1F9C3	1.0e-295	87.24	DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Cmc01g0012171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	4.4e-219	67.14	RH39	[more]
AT3G06980.1	1.0e-50	32.85	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	2.4e-47	33.06	DEA(D/H)-box RNA helicase family protein	[more]
AT2G42520.1	4.1e-47	31.81	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G01540.2	1.6e-46	32.20	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..569
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 602..618
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	PANTHER	PTHR47960:SF19	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39	coord: 32..550
None	No IPR available	PANTHER	PTHR47960	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	coord: 32..550
None	No IPR available	CDD	cd00268	DEADc	coord: 131..330 e-value: 1.93647E-73 score: 232.332
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 351..483 e-value: 1.21145E-41 score: 145.343
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 139..358 e-value: 3.0E-46 score: 169.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 151..338 score: 27.654823
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 392..474 e-value: 1.1E-24 score: 98.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 363..474 e-value: 9.1E-25 score: 87.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 363..520 score: 16.758076
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 344..569 e-value: 7.5E-41 score: 142.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 83..339 e-value: 3.1E-68 score: 231.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 151..485
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 144..327 e-value: 6.7E-41 score: 140.0
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 120..148 score: 11.872265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0012171.1	Cmc01g0012171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity