Cmc01g0011161 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0011161
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description40S ribosomal protein S4
LocationCMiso1.1chr01: 6333807 .. 6336464 (+)
RNA-Seq ExpressionCmc01g0011161
SyntenyCmc01g0011161
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTGGATTTCTTTGTCTATGCTTGTGTTTTCCCGTCTTGGTAATCCATATACATAAATTTTTTGTCTGAAGTTAATGCCTATGGTTATGACAGGCAAGAGGGCTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTGTTGTTTTATTATTATTTTTTATTTTCTTTTTCTTTCCGGGTTTAGGCATTACAACATTTAGTTTTACTCTCTAATCTGTTTGTAGGCCCCCAAACCTTCGTCTGGTCCTCATAAGTCAAGGGAGTGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAATATGCTCTCACATACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCCGGACTGATAAGACTTTTCCTGCTGGTTTCATGGGTATGCTTGTCTTAAACTTTGTAACCTTATTAGTGTTTTATTTCAAATCATCCAATATATACTGACCCTTTTACATTAGTGCCTTTATAGAAGTTGTTACAGATTGCTTGCTAAATTGATCTTTTTATTCTCGGAATTGGCTGTTGATTTTATGAACTGAATTGGGGAAATAATGGAGTGATAACTCATCCATCCATATGGATTGTCTTCTTTTGGTTCTATTGCTTTCCATGCTCTCATATTAGGCTATTCCTAATGGTTGGTGGAGTTTGTTTTATAAGTTGTATATTATTTATTTTTGGTCGCTTGACTGTTAGTTCTCTATCGTCATTTTGGTTTAGCATTTTTTAACTATTCTTCTCAGTGGAGGATGCTATTTTTCAAACTGTTCTTTTTCTTCTAAAAGTGTTGTCTGTGAATGGGAATGGGCCAAATAGTTAGGAATGCAACTATAACTTTACCTGCCAAATTACCAAGTGCGAACAAAATGATATTGATGATATGTTCAAATGGTTTGATCATTGACTCATAAACATGTCCTGCTTGTAACTGCTTTGTATGTACGTTGCTTCATGTTTGTTCTGTTTGTTGCCTTTGTGTATAATTTTAAGCACATCACTAATTTTTGTCTGTTTCCCTCTTTAGACATTCTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGGTTAGCCACTGTTCTTCTGATATTGACCTTTGACCTGCTGTTTATTACAATCTTGTTGTATAAAGTGTACTAGATTCAAAGAAAATTATATGCAATTAAAAAGGAGGTTTTGGCATCGATGGTTCATAAATTATAGGGGAGAGGTTTAGCATTTGTTTGGTTGGATTATTGTATTCTATATTCATTCTGCATTTGTTAGTTTGATTTTTTGAAGTTAGATGCTCTTTTCAGATTCTTATCATGCGATGGTTATGTAGGGAAATAAAAGACTTTGAACTAGAGGTGATAGACGGTTTGGTTTTGTCGGTTTTGAAGCCAACCAATAACCAAACCTAACAGATCGATTTTACACATAAGGTATCCAGACCAGTGTCCAATAAAAGACAAAATCAGTGGATTGGTTTTATTTGGATTGATTTATTATTGGTTTGGTTCTTTGTTTTTGACATTTTCATTTCTTCTTCCAAATTTTATTCTTTCCACTTTGTTTTGAATTTCATTTTTGCTAGATTTAAATTAAAATTTGGACTATTTCTTTCTTTATAAATTGCAATTTGACATTTTTGTTTTCTTATTTTTTGACTATTCTCTAAATAAAAAGCATGCATGGTACGTAATAATTAGTCTTTTTTTCTAAAGAACAAATATTCATGCACCATAATAATTATAATACAAAAAGATACTGAAGAATGTATTTTTAGTAATATATCTACCATATGGTTCAGTTTGGTTTTCATTGGTTTTTCCCACAAAATTCCGAACCAAACCAGTATGTTTTGGTTTTTTAACAATACAAACCAAGAAGTCCAATTTGATACTAAAAACTAAACCAAACAAACCATTAGATTGGTTTAGATTGGTTTGGTTTTTCTATTTTTTGGTTTTTCTATTTTTTGGTTTTTTTGTATGATTCCTTTCTGAAGTAACAGGCTGGAGATGCTGGACACTGTTTGTTGTCCATGATATAATTGGACGGTTCAAAGGTTGACTTTCATATTATTTTTTTGCAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTTTGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAACGACACTATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATTAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGACATGAATTTGCAACTCGGCTGGGCAATGTGTTCACTATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGAAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTAAGACTTGGTGTATT

mRNA sequence

ATGCTCTCTGGATTTCTTTGTCTATGCTTGTGTTTTCCCGTCTTGGCAAGAGGGCTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCGTCTGGTCCTCATAAGTCAAGGGAGTGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAATATGCTCTCACATACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCCGGACTGATAAGACTTTTCCTGCTGGTTTCATGGACATTCTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTTTGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAACGACACTATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATTAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGACATGAATTTGCAACTCGGCTGGGCAATGTGTTCACTATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGAAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTAAGACTTGGTGTATT

Coding sequence (CDS)

ATGCTCTCTGGATTTCTTTGTCTATGCTTGTGTTTTCCCGTCTTGGCAAGAGGGCTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCGTCTGGTCCTCATAAGTCAAGGGAGTGCCTCCCCTTGATCCTTATATTGAGGAACCGGCTGAAATATGCTCTCACATACCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCCGGACTGATAAGACTTTTCCTGCTGGTTTCATGGACATTCTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTTTGATGGACGCACAATTCGTTATCCTGACCCTCTGATTAAGGCGAACGACACTATCAAGCTAGACCTTGAGTCTAACAAGATTGCTGATTTCATTAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTTATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGACATGAATTTGCAACTCGGCTGGGCAATGTGTTCACTATTGGTAAGGGGACTAAGCCATGGGTGTCCCTACCTAAGGGCAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGAAAGAGGCTGGCAAGCCAAGCCGCAGTTACTGCTTAA

Protein sequence

MLSGFLCLCLCFPVLARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Homology
[Close]
BLAST of Cmc01g0011161 vs. NCBI nr
Match: XP_008461503.1 (PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo] >KAA0052862.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 532.7 bits (1371), Expect = 1.9e-147
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. NCBI nr
Match: TYK04363.1 (40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 12  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 71

Query: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 135
           IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 72  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 131

Query: 136 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195
           KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
Sbjct: 132 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 191

Query: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 192 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 251

Query: 256 KGIKLSIIEEARKRLASQAAVTA 279
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 252 KGIKLSIIEEARKRLASQAAVTA 274

[Close]
BLAST of Cmc01g0011161 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 260/264 (98.48%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 528.9 bits (1361), Expect = 2.7e-146
Identity = 259/264 (98.11%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. NCBI nr
Match: XP_004150395.3 (40S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein Csa_016358 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 259/264 (98.11%), Postives = 263/264 (99.62%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQA VTA
Sbjct: 241 GKGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 504.2 bits (1297), Expect = 9.3e-142
Identity = 239/261 (91.57%), Postives = 257/261 (98.47%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-141
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.1e-141
Identity = 239/264 (90.53%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQR V+VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 241 GKGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 6.1e-141
Identity = 237/261 (90.80%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.5e-139
Identity = 239/261 (91.57%), Postives = 253/261 (96.93%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHV+VDGKVRTDKT+PAGFMD++SIPKTNE+FRLLYDTKGRF LH++  +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
            KGIKLSIIEEARKRLA+Q A
Sbjct: 241 RKGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match: A0A5A7UAW2 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00150 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 9.1e-148
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match: A0A1S3CEL9 (40S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500084 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 9.1e-148
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match: A0A5D3BXA6 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00330 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 12  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 71

Query: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 135
           IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 72  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 131

Query: 136 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195
           KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
Sbjct: 132 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 191

Query: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 192 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 251

Query: 256 KGIKLSIIEEARKRLASQAAVTA 279
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 252 KGIKLSIIEEARKRLASQAAVTA 274

[Close]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146
Identity = 259/263 (98.48%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 135
           IAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 136 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195
           KLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 256 KGIKLSIIEEARKRLASQAAVTA 279
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146
Identity = 258/264 (97.73%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKT+ENFRLLYDTKGRFRLHSVRDEEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           YKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAAVTA 279
           GKGIKLSIIEEARKRLASQAAVTA
Sbjct: 241 GKGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Cmc01g0011161 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 504.2 bits (1297), Expect = 6.6e-143
Identity = 239/261 (91.57%), Postives = 257/261 (98.47%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Cmc01g0011161 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.8 bits (1296), Expect = 8.7e-143
Identity = 239/261 (91.57%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRLASQ A
Sbjct: 241 GKGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Cmc01g0011161 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 501.5 bits (1290), Expect = 4.3e-142
Identity = 237/261 (90.80%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 195 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 254
           VMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240

Query: 255 GKGIKLSIIEEARKRLASQAA 276
           GKGIKL+IIEEARKRL++Q A
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Cmc01g0011161 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-131
Identity = 222/243 (91.36%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 33  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 92
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 93  DKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 152
           DKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 153 LNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 212
           LNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 213 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 272
           EKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 273 QAA 276
           Q A
Sbjct: 241 QQA 243

[Close]
BLAST of Cmc01g0011161 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 347.4 bits (890), Expect = 1.0e-95
Identity = 161/181 (88.95%), Postives = 175/181 (96.69%), Query Frame = 0 

Query: 15  LARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 74
           +ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 75  VIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 134
           VI+ILMQRH+ VDGKVRTDKT+PAGFMD++SIPKTNENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 135 YKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 194
           +KLCKVRS+QFGQKGIPYLNT+DGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKC 180

Query: 195 V 196
           V
Sbjct: 181 V 181

The following BLAST results are available for this feature:
BLAST of Cmc01g0011161 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461503.11.9e-14799.62PREDICTED: 40S ribosomal protein S4-3-like [Cucumis melo] >KAA0052862.1 40S ribo... [more]
TYK04363.12.4e-147100.0040S ribosomal protein S4-3-like [Cucumis melo var. makuwa][more]
XP_038900121.11.2e-14698.4840S ribosomal protein S4-3 [Benincasa hispida][more]
XP_038899765.12.7e-14698.1140S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_004150395.33.5e-14698.1140S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein ... [more]
BLAST of Cmc01g0011161 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYK69.3e-14291.5740S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P492041.2e-14191.5740S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
P463002.1e-14190.5340S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
Q93VH96.1e-14190.8040S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P462992.5e-13991.5740S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1[more]
BLAST of Cmc01g0011161 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAW29.1e-14899.6240S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A1S3CEL99.1e-14899.6240S ribosomal protein S4 OS=Cucumis melo OX=3656 GN=LOC103500084 PE=3 SV=1[more]
A0A5D3BXA61.2e-147100.0040S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7V1R92.9e-14698.4840S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0K4K72.9e-14697.7340S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1[more]
BLAST of Cmc01g0011161 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58420.16.6e-14391.57Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.18.7e-14391.57Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.14.3e-14290.80Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.22.6e-13191.36Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.21.0e-9588.95Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 188..215
e-value: 7.7E-4
score: 28.8
IPR005824KOWPFAMPF00467KOWcoord: 191..224
e-value: 1.5E-6
score: 28.0
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 56..120
e-value: 2.8E-4
score: 30.2
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 61..103
e-value: 2.9E-6
score: 26.9
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 65..126
e-value: 1.43956E-5
score: 40.3106
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 15..131
e-value: 5.2E-60
score: 202.6
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 226..272
e-value: 7.3E-26
score: 89.6
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 109..183
e-value: 5.9E-36
score: 122.2
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 17..53
e-value: 4.4E-19
score: 68.3
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 136..186
e-value: 2.6E-30
score: 106.0
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 189..259
e-value: 1.9E-39
score: 135.4
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 15..255
e-value: 3.7E-97
score: 322.2
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 16..234
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 235..278
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 21..252
score: 36.355793
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 16..234
coord: 235..278
NoneNo IPR availablePROSITEPS50889S4coord: 56..118
score: 8.833789
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 22..36
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 189..243
e-value: 3.32493E-31
score: 108.757

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0011161.1Cmc01g0011161.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding