Cmc01g0010861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0010861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	CMiso1.1chr01: 5851954 .. 5854047 (+)
RNA-Seq Expression	Cmc01g0010861
Synteny	Cmc01g0010861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGTATTATTATTTTTGTTATAGGCTTTTTTTATGGCTCCGAAGAAAATATCCCTACGAATTTGGAAGAGGGTTTTTCCCGATGAAGATAAACCCTAATACTTTCCCTTCAATTAGCTCTGGATTCAGCTTCATAGCTTTTACCTAGGCAGGTGAGTTCGCTCGATTATTCTTCTCCATTTTTTGTTCTGTTGTTGTTTCTTCCATCTCACAAAGCAATTGATACATATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGACGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGAGAGCCATAAACTTGTCTATTTTGTTGTATACTATTAGAGATTGTGCTCTGCTATGTAGTAACGATAGTTTCCTTGCGAAATAGCAATGAAAGCTTTCCTCGTATCATCAAATTTATTTTATGCATATTGTTGTACTCTTTGCATTTCTTTTAGGCGTGTAAACATTTGGAGTTTGTTTGGCTCACTTGTGTTAAATAACTCTACCTCAATAAGGTTTTCTATTGAAATTTGTACATTTATCGACCTTATTCGCGCTATATCACATGCAAAACTACATCAATTACCAGTTTGGCACCTTGTAGTCATTTTTGAATACCCTAATAAAATAAAGTTAATTT

mRNA sequence

TTTAGTATTATTATTTTTGTTATAGGCTTTTTTTATGGCTCCGAAGAAAATATCCCTACGAATTTGGAAGAGGGTTTTTCCCGATGAAGATAAACCCTAATACTTTCCCTTCAATTAGCTCTGGATTCAGCTTCATAGCTTTTACCTAGGCAGGTGAGTTCGCTCGATTATTCTTCTCCATTTTTTGTTCTGTTGTTGTTTCTTCCATCTCACAAAGCAATTGATACATATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGACGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGAGAGCCATAAACTTGTCTATTTTGTTGTATACTATTAGAGATTGTGCTCTGCTATGTAGTAACGATAGTTTCCTTGCGAAATAGCAATGAAAGCTTTCCTCGTATCATCAAATTTATTTTATGCATATTGTTGTACTCTTTGCATTTCTTTTAGGCGTGTAAACATTTGGAGTTTGTTTGGCTCACTTGTGTTAAATAACTCTACCTCAATAAGGTTTTCTATTGAAATTTGTACATTTATCGACCTTATTCGCGCTATATCACATGCAAAACTACATCAATTACCAGTTTGGCACCTTGTAGTCATTTTTGAATACCCTAATAAAATAAAGTTAATTT

Coding sequence (CDS)

ATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGACGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGA

Protein sequence

MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW

Homology

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BLAST of Cmc01g0010861 vs. NCBI nr
Match: XP_008461525.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 974.2 bits (2517), Expect = 4.4e-280
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480
           GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK
Sbjct: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480

Query: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           QKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of Cmc01g0010861 vs. NCBI nr
Match: KAA0051010.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 968.8 bits (2503), Expect = 1.9e-278
Identity = 508/511 (99.41%), Postives = 508/511 (99.41%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDD---DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDD   DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of Cmc01g0010861 vs. NCBI nr
Match: XP_004139734.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN44834.2 hypothetical protein Csa_016619 [Cucumis sativus])

HSP 1 Score: 913.3 bits (2359), Expect = 9.3e-262
Identity = 473/508 (93.11%), Postives = 492/508 (96.85%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRK+H PFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKSHVPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQ+DKKLKL +RIRKILVQQPDRVMSLK+LG+FR+DLGLE+KRR+IA
Sbjct: 61  VVKRRKELPFDNVIQKDKKLKLALRIRKILVQQPDRVMSLKDLGRFRKDLGLERKRRIIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAF+LKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFALKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTD GLPLEFRDTICHRYPQYFRVVAT+RGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDLGLPLEFRDTICHRYPQYFRVVATKRGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPYISPYSDFSG+KA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYISPYSDFSGLKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTP KEKHAC VVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPPKEKHACAVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYR SQLIDKDRLLIIKEKLR LV VPR R RGASN DTKGGDT+QP+DMS
Sbjct: 361 DRDSVFLREAYRGSQLIDKDRLLIIKEKLRVLVTVPRLRGRGASNSDTKGGDTDQPNDMS 420

Query: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480
           GEEWSDVD+LLDDDDDEFDDDEFDDDNN AFEDDW+DEDDTPPSF+GD+DGESINIGSRK
Sbjct: 421 GEEWSDVDDLLDDDDDEFDDDEFDDDNNGAFEDDWNDEDDTPPSFDGDEDGESINIGSRK 480

Query: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           QKQVNDLQKV QS LSPVLPDG+ RE+W
Sbjct: 481 QKQVNDLQKVDQSPLSPVLPDGKHREKW 508

[Close]

BLAST of Cmc01g0010861 vs. NCBI nr
Match: XP_038900012.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 887.1 bits (2291), Expect = 7.1e-254
Identity = 468/508 (92.13%), Postives = 481/508 (94.69%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           M SKLLLY PK SLSISVPFILGHKSY SVKS+FWGKNL+ RNRND+LRK H PFQPIRA
Sbjct: 1   MGSKLLLYCPKPSLSISVPFILGHKSYCSVKSEFWGKNLEFRNRNDSLRKPHVPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKEL FDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELKFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLR+LVAVPRF+ RGA   D  G DT+QP DMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRSLVAVPRFQGRGAPKSDMDGEDTDQPDDMS 420

Query: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480
           GEEWSDVDN+ DDDDDEFDD +     + AFEDDW DEDDTPPSF+GD+DGESIN GSRK
Sbjct: 421 GEEWSDVDNVWDDDDDEFDDGD-----DGAFEDDWIDEDDTPPSFDGDRDGESINSGSRK 480

Query: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           QKQVN+LQKVGQS LSPVLPDGRPRERW
Sbjct: 481 QKQVNNLQKVGQSLLSPVLPDGRPRERW 503

[Close]

BLAST of Cmc01g0010861 vs. NCBI nr
Match: XP_022156569.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 833.2 bits (2151), Expect = 1.2e-237
Identity = 444/519 (85.55%), Postives = 473/519 (91.14%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSY------YSVKS-QFWGKNLDLRNRND----NLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y      +S+KS +FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQ 480
           G +TNQP D+SGE+WSDVDNLL DDDD+      +DD ++ ++D WSDEDDTPPSF+GD 
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDD------EDDGDDTYDDGWSDEDDTPPSFDGDG 480

Query: 481 DGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 DGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 1.1e-169
Identity = 334/540 (61.85%), Postives = 406/540 (75.19%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVK------------SQFWGKNLDLRNRN--- 60
           M+ KLLL + K  L +S       K+  SVK            SQF G+ L L N+    
Sbjct: 1   MEPKLLLSAHK-PLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFW 60

Query: 61  DNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGK 120
              RK     +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV QPDR+MSL+ LGK
Sbjct: 61  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 120

Query: 121 FRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLL 180
           +RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T+EAERLYL+E++IRNE+E +L
Sbjct: 121 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVL 180

Query: 181 VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELT 240
           V+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC RYPQYFRVV T RGPALELT
Sbjct: 181 VVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELT 240

Query: 241 HWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRD 300
           HWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSKSE RKISQFRD
Sbjct: 241 HWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 300

Query: 301 IPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRG 360
           + YISPY DFS +++GT +KEKHACGV+HE+L+LT EKRTLVDHLTHFREEFRFSQQLRG
Sbjct: 301 MQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 360

Query: 361 MLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASN 420
           MLIRHPD+FYVSLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG   
Sbjct: 361 MLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPR 420

Query: 421 GDTKGGDT----------NQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDW 480
            D +G +            +  +   EEWSDVD  L+ +D   DDD            DW
Sbjct: 421 KDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDD-----------GDW 480

Query: 481 SD---EDDTPPSFNGDQDGE---SINIG-SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           +D   E+D PP+F+ D + E   S+ IG S   ++ +  +K  +  L+PV PDG PRE+W
Sbjct: 481 TDDEGEEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-157
Identity = 328/527 (62.24%), Postives = 391/527 (74.19%), Query Frame = 0


Query: 1   MDSKLLLY---SPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQP 60
           MD+KLLL    SP A+L         H      KS F G +L L +    LR    P  P
Sbjct: 1   MDAKLLLLPFPSPPATL---------HHHPPPPKSLFLGASLPLLHPPPPLRLLR-PGAP 60

Query: 61  IR------AVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLG 120
            R      A VKRRKE+PFDNVIQRDKKLKLV+++R ILV  PDRVMSL++LG+FRRDLG
Sbjct: 61  RRLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLG 120

Query: 121 LEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRK 180
           L +KRRLIALLK+FP VFEVVEEG +SL+F+LT  AERLYL+EL ++NE EGL V KLRK
Sbjct: 121 LTRKRRLIALLKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRK 180

Query: 181 LLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPEL 240
           LLMMS DKRIL+EKIAHL+ D GLP EFRDTIC RYPQYFRVV  +RGP LELTHWDPEL
Sbjct: 181 LLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPEL 240

Query: 241 AVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISP 300
           AVSAAE+AEEENRARE +E+NLIIDRPLKFNRVKLP+GL LS+ E R+++QF+++PYISP
Sbjct: 241 AVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISP 300

Query: 301 YSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 360
           YSDFS +++G+ +KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQ LRGMLIRHP
Sbjct: 301 YSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHP 360

Query: 361 DMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGG 420
           DMFYVSLKGDRDSVFLREAY++SQL++K +L+++KEK+RALVAVPRF  RG      +  
Sbjct: 361 DMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEAD 420

Query: 421 DTNQPSDMSGEEWSDVDNLLDDDDDEFDDDE--------FDDDNNEAFEDDW-SDEDDTP 480
            TN  + M   E SDV+   DD+D+   D E           D +  + D W  + DD+P
Sbjct: 421 RTNGAAQML-SEGSDVE---DDEDEGLSDMEDLISEISGGKSDTDYHWGDGWVGENDDSP 480

Query: 481 PSFNGDQDGESI-NIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           P F  D DG S+  +    +K  N     G++ + PV PDGRPRERW
Sbjct: 481 PDFE-DDDGSSLKEVKVTMKKTANSAN--GKAHV-PVFPDGRPRERW 509

[Close]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 3.3e-153
Identity = 312/517 (60.35%), Postives = 379/517 (73.31%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRND--NLRKAHDPFQPI 60
           MD+KLLL  P A  + +           S KS F G  L    R     LR    P   +
Sbjct: 1   MDAKLLLPFPFAPAAAT----------RSPKSLFLGAPLPPPPRPPPFPLRLRPRPAAVV 60

Query: 61  -RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRR 120
            +A VKRRKE PFD VIQRDKKLKLV+++R ILV QPDRVMSL+ELG+FRRDLGL +KRR
Sbjct: 61  AQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRR 120

Query: 121 LIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSA 180
           LIALL++FP VF+VVEEG +SL+F+LT  AERLYL+EL++RNE EGL V KLRKLLMMS 
Sbjct: 121 LIALLRRFPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQ 180

Query: 181 DKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAE 240
           +KRIL+EK+AHL+ D GLP EFRDT+C RYPQYFRVV  +RGPALELTHWDPELAVSAAE
Sbjct: 181 EKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAE 240

Query: 241 LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG 300
           LAEEE+RARE EE+NLIIDRPLKFNRV+LPKGL L++ E R+I++F+++PYISPY+DFS 
Sbjct: 241 LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSH 300

Query: 301 IKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 360
           +++G+ +KEKHACGVVHEIL+LT+EKRTLVDHLTHFREEFRFSQ LRGM+IRHPDMFYVS
Sbjct: 301 LRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVS 360

Query: 361 LKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGA----SNGDTKGGDT 420
            KGDRDSVFLREAY+DSQL++K++L+++KEK+RALVAVPRF  R A       +   G  
Sbjct: 361 FKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSL 420

Query: 421 NQPSDMSGEEWSDVDNLLDDDDDEFDD-DEFDDDNNEAFEDDW-SDEDDTPPSFNGDQDG 480
                +S EE+ D D  L D +D   +      D +  + D W  + DD+PP F  D+  
Sbjct: 421 QSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGDGWFGENDDSPPDFGDDEVK 480

Query: 481 ESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
            ++ I                S   PV PDGRPRERW
Sbjct: 481 VAMKIAD---------GSANGSAPVPVFPDGRPRERW 498

[Close]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-37
Identity = 113/362 (31.22%), Postives = 200/362 (55.25%), Query Frame = 0


Query: 54  PFQPIRAVVKRR---KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDL 113
           PF     + K++   ++  +DN ++ +KK++ V++   +++ QP+  +++  L    R L
Sbjct: 33  PFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 92

Query: 114 GLE-KKRRLIALLKKFPAVFEVVEEGAFSLKF-KLTAEAERLYLEELKIRNEMEGLL--- 173
           GL  K+    A L KFP VFE+ E     + + +LT +A    L++  IR+E E +L   
Sbjct: 93  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKA----LDQ--IRHEHEAVLDQI 152

Query: 174 ---VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE--RGP 233
              V +LRKL+MMS   RI LE +   RT+FGLP +F  ++  ++PQ+FR++  E  R  
Sbjct: 153 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 212

Query: 234 ALELTHWDPELAVSAAELAEEENRARELEEKNLIID-RPLKFN-RVKLPKGLNLSKSEMR 293
            +E+   DP L++ A E      R RE+E +   ID   ++F+  V  P G  + K    
Sbjct: 213 YIEIVEKDPNLSICAIE------RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRI 272

Query: 294 KISQFRDIPYISPYSDFSGIKAGTPQK----EKHACGVVHEILNLTLEKRTLVDHLTHFR 353
            + +++ +PY SPY D SG    + +     EK +   +HE+L+LT+EK+  ++ + HFR
Sbjct: 273 AVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFR 332

Query: 354 EEFRFSQQLRGMLIRHPDMFYVSLKGD---RDSVFLREAYRDSQLIDKDRLLIIKEKLRA 394
                 ++L+  L++H  +FY+S +G+     +VFLRE Y+  +L++ + + + + +L  
Sbjct: 333 NVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAE 382

[Close]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.4e-23
Identity = 102/370 (27.57%), Postives = 174/370 (47.03%), Query Frame = 0


Query: 62  VKRRKELPFDNV--IQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLI 121
           +K +++  FDN+  I R  +LK V+ ++  +VQ+P+R + +  + K  R   +  K  + 
Sbjct: 29  MKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTK--IA 88

Query: 122 ALLKKFPAVFEVVEEGAFSLK-FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 181
             L+KFP++FE      ++L  F+LT EA  L  +E  +       L  +L+KL++MS D
Sbjct: 89  HFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKD 148

Query: 182 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE---RGPALELTHWDPELAVSA 241
             + L  +  ++   GLP ++           FR V  E   +G A++    D  L+V  
Sbjct: 149 NVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQ 208

Query: 242 AELAEEENRARELEEKNLIIDRPLKFNRVKLP-KGLNLSKSEMRKISQFRDIPYISPYSD 301
               ++      LEE    I+ PL       P KG  L       + +F+ +PY+SPY D
Sbjct: 209 KNAMKKRRGEVSLEE----IEFPL------FPSKGCRLRVKIEDWLMEFQKLPYVSPYDD 268

Query: 302 FSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 361
           +S +   +   EK   G +HE+L L +E       L   ++ F   Q++     RHP +F
Sbjct: 269 YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIF 328

Query: 362 YVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPR--FRSRGASNGDTKGGD 421
           Y+S+K    +  LRE YRD   ++   +L +++K   L+       +SR  S G    G 
Sbjct: 329 YLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRDEGV 386

Query: 422 TNQPSDMSGE 423
            ++  D+  E
Sbjct: 389 VDKDLDLDFE 386

[Close]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL
Match: A0A1S3CG79 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4 SV=1)

HSP 1 Score: 974.2 bits (2517), Expect = 2.2e-280
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480
           GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK
Sbjct: 421 GEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRK 480

Query: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           QKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 QKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL
Match: A0A5D3BY23 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00850 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 9.0e-279
Identity = 508/511 (99.41%), Postives = 508/511 (99.41%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDD---DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDD   DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL
Match: A0A6J1DTV5 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111023444 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.9e-238
Identity = 444/519 (85.55%), Postives = 473/519 (91.14%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSY------YSVKS-QFWGKNLDLRNRND----NLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y      +S+KS +FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQ 480
           G +TNQP D+SGE+WSDVDNLL DDDD+      +DD ++ ++D WSDEDDTPPSF+GD 
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDD------EDDGDDTYDDGWSDEDDTPPSFDGDG 480

Query: 481 DGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 DGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL
Match: A0A6J1H780 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461117 PE=4 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 3.0e-234
Identity = 440/520 (84.62%), Postives = 473/520 (90.96%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSFNGD 480
           GGD +QP  MSG+E SD+DNLLD      DDDEFDD+ + AFED+WSD EDDTPPSFNGD
Sbjct: 421 GGD-DQPDYMSGDESSDIDNLLD------DDDEFDDNEDGAFEDNWSDEEDDTPPSFNGD 480

Query: 481 QDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           +DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 RDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL
Match: A0A6J1KW65 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 3.1e-231
Identity = 437/520 (84.04%), Postives = 469/520 (90.19%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60
           MDS +L YSPKASLS+S+PF+L H++Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRAYFFENPSSSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K+  PFQPI A+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPITAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAE LYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSFNGD 480
           GGD +QP  MSGEE SD+DNLLD      D DEFDD+ + AFED+WSD EDDTPPSFN D
Sbjct: 421 GGD-DQPDYMSGEESSDIDNLLD------DGDEFDDNEDGAFEDNWSDEEDDTPPSFNVD 480

Query: 481 QDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           +DGESINI +RKQ QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 RDGESINIEARKQSQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of Cmc01g0010861 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 597.8 bits (1540), Expect = 8.1e-171
Identity = 334/540 (61.85%), Postives = 406/540 (75.19%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVK------------SQFWGKNLDLRNRN--- 60
           M+ KLLL + K  L +S       K+  SVK            SQF G+ L L N+    
Sbjct: 1   MEPKLLLSAHK-PLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFW 60

Query: 61  DNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGK 120
              RK     +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV QPDR+MSL+ LGK
Sbjct: 61  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 120

Query: 121 FRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLL 180
           +RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T+EAERLYL+E++IRNE+E +L
Sbjct: 121 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVL 180

Query: 181 VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELT 240
           V+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC RYPQYFRVV T RGPALELT
Sbjct: 181 VVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELT 240

Query: 241 HWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRD 300
           HWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSKSE RKISQFRD
Sbjct: 241 HWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 300

Query: 301 IPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRG 360
           + YISPY DFS +++GT +KEKHACGV+HE+L+LT EKRTLVDHLTHFREEFRFSQQLRG
Sbjct: 301 MQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 360

Query: 361 MLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASN 420
           MLIRHPD+FYVSLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG   
Sbjct: 361 MLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPR 420

Query: 421 GDTKGGDT----------NQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDW 480
            D +G +            +  +   EEWSDVD  L+ +D   DDD            DW
Sbjct: 421 KDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGNDDD-----------GDW 480

Query: 481 SD---EDDTPPSFNGDQDGE---SINIG-SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 509
           +D   E+D PP+F+ D + E   S+ IG S   ++ +  +K  +  L+PV PDG PRE+W
Sbjct: 481 TDDEGEEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of Cmc01g0010861 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 227.3 bits (578), Expect = 2.9e-59
Identity = 156/426 (36.62%), Postives = 242/426 (56.81%), Query Frame = 0


Query: 71  DNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 130
           D  + +  +++ V ++  +L+ +P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 131 V-----------VEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADK 190
           +             +    L  +LT+ A  L ++EL +++E+   L  KL+KLLM+S+ +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 191 RILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELA 250
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPELA       
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA------- 245

Query: 251 EEENRARELE-EKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGI 310
              N+    E ++ LI+DRPLKF R+ L +GLNL +     + +FR+ P + PY   S  
Sbjct: 246 ---NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDY 305

Query: 311 KAG-TPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 370
            A  + + EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FYVS
Sbjct: 306 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 365

Query: 371 LKGDRDSVFLREAYRDS-QLIDKDRLLIIKEKLRALVAV-PRFRSRGASNGDTKGGDTNQ 430
           +KG RDSVFL EAY D+  L+DKD  L+I+E+L  L+    R R      G T G  + +
Sbjct: 366 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVE 425

Query: 431 PSDMSGEEWSDVDNLLDDDDDEFDDDEFD-DDNNEAFEDDWSDEDDTPPSFNGDQDGESI 481
                 E   D D+ LDD+ ++  ++ FD +D    +  D  D+DD         +GES+
Sbjct: 426 EKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDD-----EAGVNGESV 476

[Close]

BLAST of Cmc01g0010861 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-46
Identity = 127/336 (37.80%), Postives = 189/336 (56.25%), Query Frame = 0


Query: 65  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 124
           +K+   D  I++DK+ KL  R+ K ++ +P +V+ L+ L K R  L L  K +  + ++ 
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEM 98

Query: 125 FPAVFEV----VEEGAFSLKFKLTAEAERLYL-EELKIRNEMEGLLVIKLRKLLMMSADK 184
            P++FE+    ++  +  ++F       R +L EE +I +E E LLV KL +LLMM+ DK
Sbjct: 99  NPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDK 158

Query: 185 RILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVA-TERGPA-LELTHWDPELAVSAAE 244
            I  +K+ H++ DFG P +F   +  +YP YFR+    E G + LEL  W+P+ A S  E
Sbjct: 159 VISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIE 218

Query: 245 LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG 304
           L     RA +   K  +  RP  +N VKLP G  L K        + +  YISPY D S 
Sbjct: 219 L-----RAEDETLKTGVRIRP-NYN-VKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSH 278

Query: 305 IKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 364
           +   + + EK   GVVHE+L+L+L KR  V  L  F +EFRFS     +  RH  +FY+S
Sbjct: 279 LDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLS 338

Query: 365 LKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALV 394
           LKG   +  LREAY+D +L+D+D LL IK+K   L+
Sbjct: 339 LKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365

[Close]

BLAST of Cmc01g0010861 vs. TAIR 10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 176.8 bits (447), Expect = 4.4e-44
Identity = 118/336 (35.12%), Postives = 183/336 (54.46%), Query Frame = 0


Query: 59  RAVVKRRKELP-FDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRR 118
           +++     +LP  ++++ RD   + ++R ++ + +QP+R++ L + GK  R+LG  + R+
Sbjct: 59  KSIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRK 118

Query: 119 LIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSA 178
           +   + K P +F+        +    T   E L  EE  +   ME   V  +RKLLMM+ 
Sbjct: 119 VTKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTK 178

Query: 179 DKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERG-PALELTHWDPELAVSAA 238
           DKRILL KI H R  FG+P +FRD +  +YP YFRVV    G   LEL +WD  LAVS  
Sbjct: 179 DKRILLSKIHHTRLLFGIPEDFRDRVA-KYPDYFRVVTGGDGNRVLELVNWDTNLAVSEL 238

Query: 239 E--LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSD 298
           E     +E++A+          R  KF  VK  K L L + + RK++     P +SPYSD
Sbjct: 239 ERLFMIDEDKAK----------RVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSD 298

Query: 299 FSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 358
              +   + + EK+  G+VHE LNLTLEKR  + H+  F++EF  ++Q   ML +    F
Sbjct: 299 GWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSF 358

Query: 359 YVSLKGDRDSVFLREAY-RDSQLIDKDRLLIIKEKL 390
           Y++      +VFL++AY  +  L+ KD  ++  EKL
Sbjct: 359 YLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEKL 382

[Close]

BLAST of Cmc01g0010861 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-40
Identity = 136/409 (33.25%), Postives = 212/409 (51.83%), Query Frame = 0


Query: 59  RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRL 118
           R+  KR +EL  +   ++ K    V+ + ++L  + D +M+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQEL--EIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 119 IALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 178
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMS D
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 179 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPA-LELTHWDPELAVSAAE 238
           K++ L+KI H R DFGLPL+FR    + +PQ+F+VV    G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 239 LAEEENRARELEEKNLIIDRPLKFN--------RVKLPKGLNLSKSEMRKISQFRDIPYI 298
                    ELE+K L I    +           +K P           KI  F+   Y+
Sbjct: 232 ---------ELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYL 291

Query: 299 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 358
           SPY+D  G++AG+ + +K A  V+HE+L+ TLEKR + DHLTHFR EF   Q+L  + ++
Sbjct: 292 SPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLK 351

Query: 359 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 418
           H  +FYVS +G R SVFL E Y   +LI+K  L++ KEKL         +    +  DT 
Sbjct: 352 HCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIQTYSDTL 411

Query: 419 GGDTNQPSDM-SGEEWSDVDNLLDDDDDEF--DDDEFD-DDNNEAFEDD 455
             +  +  +  SG+E   V    D D D+   DDDE D  + N+A+E++
Sbjct: 412 DMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVNDAYEEN 446

The following BLAST results are available for this feature:

BLAST of Cmc01g0010861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461525.1	4.4e-280	100.00	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
KAA0051010.1	1.9e-278	99.41	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 prote...	[more]
XP_004139734.1	9.3e-262	93.11	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN44834....	[more]
XP_038900012.1	7.1e-254	92.13	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida]	[more]
XP_022156569.1	1.2e-237	85.55	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]

BLAST of Cmc01g0010861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	1.1e-169	61.85	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	2.2e-157	62.24	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	3.3e-153	60.35	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	1.8e-37	31.22	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	9.4e-23	27.57	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of Cmc01g0010861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CG79	2.2e-280	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4...	[more]
A0A5D3BY23	9.0e-279	99.41	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1DTV5	5.9e-238	85.55	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110234...	[more]
A0A6J1H780	3.0e-234	84.62	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KW65	3.1e-231	84.04	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122...	[more]

BLAST of Cmc01g0010861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01037.1	8.1e-171	61.85	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	2.9e-59	36.62	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	3.6e-46	37.80	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	4.4e-44	35.12	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.7e-40	33.25	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..492
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..508
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 66..394 e-value: 1.0E-107 score: 359.8
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 42..450
IPR040293	Protein WHAT'S THIS FACTOR 1-like	PANTHER	PTHR31476:SF4	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 42..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0010861.1	Cmc01g0010861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0003723	RNA binding