Cmc01g0010501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0010501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr01: 5516653 .. 5518349 (+)
RNA-Seq Expression	Cmc01g0010501
Synteny	Cmc01g0010501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGCTAGTATAACTAATATAAATAAATTGTATGTTTTCAGTAATTTGATACTGACGAGTGTTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATATTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTATTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATCCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTTCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTAGAATCTCTGTTAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTTAACGAGTTACAGACTTTCGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTTGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCCAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTTTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGCGCTTCAACTTTGTTTACAGAAATCTTTTCTTTATTAGAAAATGTATATGTTGTTCCTAATTTAAAAAGGAACTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGAACATTAACATCTAAAGCCCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTATGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAATACCTTTTACTGGAAAAGGTCGTAGGGTCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTAA

mRNA sequence

ATGGAAAATGCTAGTATAACTAATATAAATAAATTGTATGTTTTCAGTAATTTGATACTGACGAGTGTTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATATTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTATTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATCCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTTCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTAGAATCTCTGTTAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTTAACGAGTTACAGACTTTCGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTTGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCCAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGCGCTTCAACTTTGTTTACAGAAATCTTTTCTTTATTAGAAAATGTATATGTTGTTCCTAATTTAAAAAGGAACTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGAACATTAACATCTAAAGCCCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTATGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAATACCTTTTACTGGAAAAGGTCGTAGGGTCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTAA

Coding sequence (CDS)

ATGGAAAATGCTAGTATAACTAATATAAATAAATTGTATGTTTTCAGTAATTTGATACTGACGAGTGTTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATATTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTATTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATCCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTTCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTAGAATCTCTGTTAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTTAACGAGTTACAGACTTTCGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTTGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCCAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGCGCTTCAACTTTGTTTACAGAAATCTTTTCTTTATTAGAAAATGTATATGTTGTTCCTAATTTAAAAAGGAACTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGAACATTAACATCTAAAGCCCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTATGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAATACCTTTTACTGGAAAAGGTCGTAGGGTCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTAA

Protein sequence

MENASITNINKLYVFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSDDDASWNWACRLSNCSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY

Homology

[Close]

BLAST of Cmc01g0010501 vs. NCBI nr
Match: KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 934.5 bits (2414), Expect = 4.2e-268
Identity = 491/552 (88.95%), Postives = 499/552 (90.40%), Query Frame = 0


Query: 14  VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRT 73
           VF NLI+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLV+ECPQVPAANATRT
Sbjct: 112 VFVNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRT 171

Query: 74  IREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPL 133
           +REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD L
Sbjct: 172 VREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDAL 231

Query: 134 KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAV 193
           KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAV
Sbjct: 232 KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAV 291

Query: 194 MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKW 253
           MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKW
Sbjct: 292 MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW 351

Query: 254 KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL 313
           KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Sbjct: 352 KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL 411

Query: 314 VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSA 373
           VLETCLVENDDSAWIIDS             +SW          R+           G  
Sbjct: 412 VLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGL 471

Query: 374 STLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN 433
                + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN
Sbjct: 472 RLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN 531

Query: 434 NLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGL 493
           NLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGL
Sbjct: 532 NLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGL 591

Query: 494 LSELEENSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFIT 543
           LSELEENSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFIT
Sbjct: 592 LSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFIT 651

[Close]

BLAST of Cmc01g0010501 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 3.0e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 3.0e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 3.0e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 926.8 bits (2394), Expect = 8.7e-266
Identity = 486/546 (89.01%), Postives = 493/546 (90.29%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-26
Identity = 143/553 (25.86%), Postives = 232/553 (41.95%), Query Frame = 0


Query: 32  KLNGNN-YASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARA 91
           K NG+N +++W+  +  +LI   L  VL  +  +     A        E WA  +E+A +
Sbjct: 10  KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69

Query: 92  YILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREH 151
            I   LS+ +        TAR I   L+ ++   +   K    K +Y   M+EG +   H
Sbjct: 70  AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129

Query: 152 --VLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNEL 211
             V N ++   +A + G  I+E  +   +L SL  S+    +  +  K    L  + + L
Sbjct: 130 LNVFNGLI-TQLANL-GVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 189

Query: 212 QTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAA 271
              E + K    +G+A +        RG     +S   SS N       G  G     A 
Sbjct: 190 LLNEKMRKKPENQGQALITEG-----RG-----RSYQRSSNN------YGRSG-----AR 249

Query: 272 AKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LLVL 331
            K+  ++K+    C++CNQ GH+KR+CP     K +    K D             +L +
Sbjct: 250 GKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFI 309

Query: 332 ---ETCL-VENDDSAWIIDSDDD--------------ASWNWACRLSNCSGSASTLFTEI 391
              E C+ +   +S W++D+                 A      ++ N S S      +I
Sbjct: 310 NEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDI 369

Query: 392 --------FSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLE 451
                     +L++V  VP+L+ NLIS   L    Y   F   K  + K  + I      
Sbjct: 370 CIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVAR 429

Query: 452 NNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNG 511
             LY  RT       N E     I Q +      + +  LWH R+ H++   ++ L K  
Sbjct: 430 GTLY--RT-------NAE-----ICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKS 489

Query: 512 LLSELEENSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFI 543
           L+S  +  ++  C+ CL GK  ++ F     R    L+LV+SD+CGPM +++ GG +YF+
Sbjct: 490 LISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFV 517

[Close]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-19
Identity = 129/563 (22.91%), Postives = 218/563 (38.72%), Query Frame = 0


Query: 34  NGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYIL 93
           +G  YA WK  I  +L   D+  V+    P            E  + W KA   A++ I+
Sbjct: 12  DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 94  ASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVRE--HV 153
             LS+       S +TAR+I+++L  ++ + S   +    K + + +++   S+    H+
Sbjct: 72  EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131

Query: 154 LNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTF 213
            + ++   +A   GA I+E  ++S +L + L S       A+       LT    + +  
Sbjct: 132 FDELISELLAA--GAKIEEMDKISHLLIT-LPSCYDGIITAIETLSEENLTLAFVKNRLL 191

Query: 214 ESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKT 273
           +  +KIK    + +        H             + N  +K          NL   + 
Sbjct: 192 DQEIKIKNDHNDTSKKVMNAIVH-------------NNNNTYKN---------NLFKNRV 251

Query: 274 TKKAKAAKG------ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDS 333
           TK  K  KG       C HC +EGH K++C  Y    K+    K      +     +   
Sbjct: 252 TKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHY----KRILNNKNKENEKQVQTATSHGI 311

Query: 334 AWIIDSDDDASWNWACRLSNCSGSASTLFTEIFSLLENVYVVPNLK-------------- 393
           A+++   ++ S    C     SG++  L  +     ++V VVP LK              
Sbjct: 312 AFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATK 371

Query: 394 ------------------------RNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SA 453
                                    NL+SVK L E   S+ F+ + V I KNG+ +  ++
Sbjct: 372 RGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNS 431

Query: 454 KLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLV 513
            + NN+ V+                   Q   +    K N  LWH R  HI+  ++  + 
Sbjct: 432 GMLNNVPVIN-----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIK 491

Query: 514 KNGLLSELE-----ENSLPVCESCLEGKMTKIPF--TGKGRRVKEPLELVHSDLCGPMNV 543
           +  + S+       E S  +CE CL GK  ++PF        +K PL +VHSD+CGP+  
Sbjct: 492 RKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITP 517

[Close]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 9.7e-10
Identity = 52/187 (27.81%), Postives = 87/187 (46.52%), Query Frame = 0


Query: 368 PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTE 427
           PN+  +L+S+  L  Q+ +  F  N      +G  +       + Y    L+ K L+ + 
Sbjct: 516 PNIAYDLLSLSELANQNITACFTRN-TLERSDGTVLAPIVKHGDFY---WLSKKYLIPSH 575

Query: 428 MFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLP------- 487
           + K  I    + K   K    L H  L H N   I++ +K   ++ L+E+ +        
Sbjct: 576 ISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTY 635

Query: 488 VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDY 543
            C  CL GK TK     KG R+K     EP + +H+D+ GP++   +    YFI+FTD+ 
Sbjct: 636 QCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEK 695

[Close]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot
Match: P25384 (Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-C PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 9.7e-10
Identity = 52/187 (27.81%), Postives = 87/187 (46.52%), Query Frame = 0


Query: 368 PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTE 427
           PN+  +L+S+  L  Q+ +  F  N      +G  +       + Y    L+ K L+ + 
Sbjct: 516 PNIAYDLLSLSELANQNITACFTRN-TLERSDGTVLAPIVKHGDFY---WLSKKYLIPSH 575

Query: 428 MFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLP------- 487
           + K  I    + K   K    L H  L H N   I++ +K   ++ L+E+ +        
Sbjct: 576 ISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTY 635

Query: 488 VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDY 543
            C  CL GK TK     KG R+K     EP + +H+D+ GP++   +    YFI+FTD+ 
Sbjct: 636 QCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEK 695

[Close]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot
Match: Q12472 (Transposon Ty2-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-DR1 PE=1 SV=3)

HSP 1 Score: 66.6 bits (161), Expect = 9.7e-10
Identity = 52/187 (27.81%), Postives = 87/187 (46.52%), Query Frame = 0


Query: 368 PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTE 427
           PN+  +L+S+  L  Q+ +  F  N      +G  +       + Y    L+ K L+ + 
Sbjct: 516 PNIAYDLLSLSELANQNITACFTRN-TLERSDGTVLAPIVKHGDFY---WLSKKYLIPSH 575

Query: 428 MFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLP------- 487
           + K  I    + K   K    L H  L H N   I++ +K   ++ L+E+ +        
Sbjct: 576 ISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTY 635

Query: 488 VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDY 543
            C  CL GK TK     KG R+K     EP + +H+D+ GP++   +    YFI+FTD+ 
Sbjct: 636 QCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEK 695

[Close]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 934.5 bits (2414), Expect = 2.0e-268
Identity = 491/552 (88.95%), Postives = 499/552 (90.40%), Query Frame = 0


Query: 14  VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRT 73
           VF NLI+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLV+ECPQVPAANATRT
Sbjct: 112 VFVNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVKECPQVPAANATRT 171

Query: 74  IREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPL 133
           +REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD L
Sbjct: 172 VREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDAL 231

Query: 134 KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAV 193
           KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAV
Sbjct: 232 KYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAV 291

Query: 194 MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKW 253
           MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKW
Sbjct: 292 MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW 351

Query: 254 KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL 313
           KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Sbjct: 352 KKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL 411

Query: 314 VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSA 373
           VLETCLVENDDSAWIIDS             +SW          R+           G  
Sbjct: 412 VLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGL 471

Query: 374 STLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN 433
                + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN
Sbjct: 472 RLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLEN 531

Query: 434 NLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGL 493
           NLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGL
Sbjct: 532 NLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGL 591

Query: 494 LSELEENSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFIT 543
           LSELEENSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFIT
Sbjct: 592 LSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFIT 651

[Close]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.4e-266
Identity = 487/546 (89.19%), Postives = 494/546 (90.48%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 926.8 bits (2394), Expect = 4.2e-266
Identity = 486/546 (89.01%), Postives = 493/546 (90.29%), Query Frame = 0


Query: 20  LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYE 79
           +TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYE
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 80  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPLKYIYNA 139
           RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHD LKYIYNA
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 140 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAY 199
           RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAY
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 200 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGG 259
           TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 260 QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 319
           QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241 QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 320 VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTE 379
           VENDDSAWIIDS             +SW          R+           G       +
Sbjct: 301 VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 380 IFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 439
            F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361 SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 440 TLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEE 499
           +LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEE
Sbjct: 421 SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 500 NSLPVCESCLEGKMTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 543
           NSLPVCESCLEGKMTK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481 NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

[Close]

BLAST of Cmc01g0010501 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 66.6 bits (161), Expect = 6.9e-11
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 434 TQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKI 493
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  ++
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 494 PFTGKGRRVKEPLELVHSDLCGPMNV 520
            F+      K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

The following BLAST results are available for this feature:

BLAST of Cmc01g0010501 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062993.1	4.2e-268	88.95	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	3.0e-266	89.19	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0047792.1	3.0e-266	89.19	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0031826.1	3.0e-266	89.19	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
TYK14550.1	8.7e-266	89.01	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0010501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.3e-26	25.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.0e-19	22.91	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12491	9.7e-10	27.81	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P25384	9.7e-10	27.81	Transposon Ty2-C Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q12472	9.7e-10	27.81	Transposon Ty2-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of Cmc01g0010501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4M1	2.0e-268	88.95	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7SMH8	1.4e-266	89.19	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5A7TWB9	1.4e-266	89.19	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5A7UGV2	1.4e-266	89.19	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]
A0A5D3CPJ6	4.2e-266	89.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]

BLAST of Cmc01g0010501 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00300.1	6.9e-11	38.37	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 281..297 e-value: 2.3E-4 score: 30.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 281..297 e-value: 1.0E-5 score: 25.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 282..297 score: 10.097754
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 441..490 e-value: 7.5E-13 score: 48.1
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 81..212 e-value: 1.7E-15 score: 57.0
None	No IPR available	GENE3D	4.10.60.10		coord: 248..312 e-value: 1.5E-7 score: 33.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..248
None	No IPR available	PANTHER	PTHR35317:SF16	ZINC FINGER, CCHC-TYPE-RELATED	coord: 27..304
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 27..304
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 498..542 e-value: 2.0E-6 score: 29.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 501..542
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 272..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0010501.1	Cmc01g0010501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding