Cmc01g0009901 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAATTTAGTCTCTAAACTTTGAGATTTGTGTTTATTAACTTTTAAAGTTTTTTAAAATTCATGGATCTACTAGACACAGGTCGTATTAGACTTGAAATTCAAGTTACCAAGGTCCTCAACATTTGGGCTTGTCTTCTACCAAAGGTTTGAACTTTGAGATCATAGTTCATAGATAAGTTATGAACAATATCATCTTTTGTTCATTGTTTCAAGCTTTGGTCACGTTATGAACAATATCATCTTCTGTTCATTGTTTCAAGCTTTGGTCACGTTATGAACAATATCATTGTGATCAGTTTTTCAATTGCATGCAGGTATTATCTACAGGGACCTAAAACCTGAAAACATTCTACTCCAGAAAGACGGACATATCATCCTCACTGATTTTGATTTATCATTTAAGACGTCTAACATACAAGTAAAATTACGTTTCCTAGTTGAGAGATGTTTACATTTCCTTTCTTTTTTGTTAAGGCATTTGACAGAGATTTATACCTTTCCTGCAGACCATAGAATCTTCACCCCCAAGAAAGAAGACATGTAGGCACAAATCATTGCCAACGTTCGTCGTTAAACCTATGGTGGAACTCAATTCATTCATTGGAACTGAAGAGTACATTGCCCCAGTATGATCCATCTCAATCTGCTATAGACGACTTTAGCCACTCAAAGAATGTTAATAATTATCTCTTTCATTTTTCTTCCAAGTTCATATCATCTGTTTTATTGTAGGAGATCATAATGGGTGCAGGCCATGGTAGTTCTATTGACTGGTGGACTCTAGGTAAGAATACATATACATCTTTTTGTTCTTTGGCACAAGTAGTGGAAGTTTATCTAGATGAATACTGAATTCACACTTTATTAAGTGTTGGGCTCAAGGAGTTAAATTGGGGGAAGTGATGTTGTTGGGCTCAAGGAGTCCAAATAAGTTCATGGGCCCTATGTGTCAAAACACATCAATACCGTACGAGTAAAAGTTTTAATAACTTCTTACATTGTACCTTACAATGTCACAACTCTCTAGACTTCACAACTTCATTCTTCCCTCGTGTTATAGTAAATTGTGAGTTAATATTCAAGTTAGTTTTTATTAAAAGGTTAGGGAACTTTTTACTGAAAGACAAATAAAACATTTGAAAGTTGGGACACTGACGTAGAATGAATTATTCAAAACTATAGTAAAGAATGGCTTATCAACTATTTGAATTGATCAATGGGATATAACTTTCATTTAATTTCGTTTGGTTTTCCAACAATAGGATGCATCACCAACATCCATGAGGCTTTTTATTTCCTTCTTTGATCATATGATGCATGAATTTCAGGTATCTTATTGTATGAAATGCTCTATGGGCGCACACCCTTCAAAGGAAAAAACAGGAATAAAACTTTTGCCAATATTTTGTTCAAGGACTTGACCTTCCCCATTAGTATTCAGGTAAGTAGCTTTCCTTTTACCCTCCACTAAAACATTTAGGTCTCGTTCGGTAACCATTGGTTTTTTGTTTTTGAAAATTAAGCTTATAAACACTCCTTTTACCTCCAAATTTTCTGCTTTGTTATCTACTTTTAACTGATATTTAAAAAAATAAAGCCAAAATTTATAAATTAAAAATGTAGCTTTTAAAAACTTGTTTATTTTTTTTAGTTGGTTAACAATTTAACTCTTTTACTTAAAGAAAATCCATTATAAGTAACTGCGAGAAAATAGGTATGATTTTGAAAAACTAAAAATTAAAATCAAAATGGTTGACAAACTATAAACCATAAAGCTGCGAAAATAAAAAAGTTAAAAAAAAAAAAAAGAAGAAGAAGAAAAGGAAAAATATAGGCAAAAGGAAAAACCCATCACTCCTGTCTCATTTTTAGCTGTTCCTTTTGTGTGTTAAGGTTTAGATCTCGTTTTCAGTTGTTTGAATACAGCTGCTGCTCATGCTTAATATCACAGGTAAGTCTTGCAGCAAAACAACTGATTGATGCACTACTACAAAGAGACCCGGCACGTCGTCTAGGATCAAGGACCGGTGCCGATGAGATCAAACGACATCCATTTTTCCGTGAACTAAATTGGCCTAAAATTCGAACCATGGTAATACTTTTCAAACAACCACATCAAGTCTCAAATTTTCAGCAAAGATAAGCAACAAATCCTATGAAAATCCAAATCTACAACATAAACAACATTTGTTTCTCTTTGAATGCAGACACCACCATCACCAGAAGTAGCCCTTCAAATAATTGAGAGAGACCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAATGCTCGGCCATTCAATGGGTTCTGCTAATGTTTTCTGAAGGATCTCTATGTTACCAGAAAAATTTGAGTCAGAATATCATCAGCAGTCTAAAAAGCATGTGGTAAAAGAAAAGGAGAGAGGTTATTTGACCTCTTAGACTAAAGAGACATTTAGCTTTGTTTATACATGCTGAGATGGAAGAATGGCATTTAGAAACATTCAACCTATGAATAGATGTGTAAATGCTTTTGAACAGAACATTCAACAATAAATCCAATTTTATCATGATTAAGTCTCAAAGAA TTTTAAATTTAGTCTCTAAACTTTGAGATTTGTGTTTATTAACTTTTAAAGTTTTTTAAAATTCATGGATCTACTAGACACAGGTCGTATTAGACTTGAAATTCAAGTTACCAAGGTCCTCAACATTTGGGCTTGTATTATCTACAGGGACCTAAAACCTGAAAACATTCTACTCCAGAAAGACGGACATATCATCCTCACTGATTTTGATTTATCATTTAAGACGTCTAACATACAAACCATAGAATCTTCACCCCCAAGAAAGAAGACATGTAGGCACAAATCATTGCCAACGTTCGTCGTTAAACCTATGGTGGAACTCAATTCATTCATTGGAACTGAAGAGTACATTGCCCCAGAGATCATAATGGGTGCAGGCCATGGTAGTTCTATTGACTGGTGGACTCTAGGTATCTTATTGTATGAAATGCTCTATGGGCGCACACCCTTCAAAGGAAAAAACAGGAATAAAACTTTTGCCAATATTTTGTTCAAGGACTTGACCTTCCCCATTAGTATTCAGGTAAGTCTTGCAGCAAAACAACTGATTGATGCACTACTACAAAGAGACCCGGCACGTCGTCTAGGATCAAGGACCGGTGCCGATGAGATCAAACGACATCCATTTTTCCGTGAACTAAATTGGCCTAAAATTCGAACCATGACACCACCATCACCAGAAGTAGCCCTTCAAATAATTGAGAGAGACCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAATGCTCGGCCATTCAATGGGTTCTGCTAATGTTTTCTGAAGGATCTCTATGTTACCAGAAAAATTTGAGTCAGAATATCATCAGCAGTCTAAAAAGCATGTGGTAAAAGAAAAGGAGAGAGGTTATTTGACCTCTTAGACTAAAGAGACATTTAGCTTTGTTTATACATGCTGAGATGGAAGAATGGCATTTAGAAACATTCAACCTATGAATAGATGTGTAAATGCTTTTGAACAGAACATTCAACAATAAATCCAATTTTATCATGATTAAGTCTCAAAGAA ATGGATCTACTAGACACAGGTCGTATTAGACTTGAAATTCAAGTTACCAAGGTCCTCAACATTTGGGCTTGTATTATCTACAGGGACCTAAAACCTGAAAACATTCTACTCCAGAAAGACGGACATATCATCCTCACTGATTTTGATTTATCATTTAAGACGTCTAACATACAAACCATAGAATCTTCACCCCCAAGAAAGAAGACATGTAGGCACAAATCATTGCCAACGTTCGTCGTTAAACCTATGGTGGAACTCAATTCATTCATTGGAACTGAAGAGTACATTGCCCCAGAGATCATAATGGGTGCAGGCCATGGTAGTTCTATTGACTGGTGGACTCTAGGTATCTTATTGTATGAAATGCTCTATGGGCGCACACCCTTCAAAGGAAAAAACAGGAATAAAACTTTTGCCAATATTTTGTTCAAGGACTTGACCTTCCCCATTAGTATTCAGGTAAGTCTTGCAGCAAAACAACTGATTGATGCACTACTACAAAGAGACCCGGCACGTCGTCTAGGATCAAGGACCGGTGCCGATGAGATCAAACGACATCCATTTTTCCGTGAACTAAATTGGCCTAAAATTCGAACCATGACACCACCATCACCAGAAGTAGCCCTTCAAATAATTGAGAGAGACCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAATGCTCGGCCATTCAATGGGTTCTGCTAATGTTTTCTGA MDLLDTGRIRLEIQVTKVLNIWACIIYRDLKPENILLQKDGHIILTDFDLSFKTSNIQTIESSPPRKKTCRHKSLPTFVVKPMVELNSFIGTEEYIAPEIIMGAGHGSSIDWWTLGILLYEMLYGRTPFKGKNRNKTFANILFKDLTFPISIQVSLAAKQLIDALLQRDPARRLGSRTGADEIKRHPFFRELNWPKIRTMTPPSPEVALQIIERDPKANDLKWEDGMLGHSMGSANVF Homology
BLAST of Cmc01g0009901 vs. NCBI nr
Match: KAA0059277.1 (phototropin-2-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cmc01g0009901 vs. NCBI nr
Match: TYK03392.1 (phototropin-2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 441.0 bits (1133), Expect = 6.3e-120 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cmc01g0009901 vs. NCBI nr
Match: XP_008462012.1 (PREDICTED: phototropin-2-like isoform X2 [Cucumis melo] >XP_016902806.1 PREDICTED: phototropin-2-like isoform X2 [Cucumis melo]) HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118 Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of Cmc01g0009901 vs. NCBI nr
Match: XP_008462011.1 (PREDICTED: phototropin-2-like isoform X1 [Cucumis melo]) HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118 Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of Cmc01g0009901 vs. NCBI nr
Match: XP_031744224.1 (phototropin-2 [Cucumis sativus]) HSP 1 Score: 422.5 bits (1085), Expect = 2.3e-114 Identity = 204/214 (95.33%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy Swiss-Prot
Match: P93025 (Phototropin-2 OS=Arabidopsis thaliana OX=3702 GN=PHOT2 PE=1 SV=2) HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75 Identity = 137/210 (65.24%), Postives = 166/210 (79.05%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy Swiss-Prot
Match: Q9ST27 (Phototropin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT2 PE=1 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.0e-68 Identity = 132/198 (66.67%), Postives = 154/198 (77.78%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy Swiss-Prot
Match: Q2QYY8 (Phototropin-1A OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1A PE=1 SV=2) HSP 1 Score: 238.4 bits (607), Expect = 8.2e-62 Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy Swiss-Prot
Match: Q2RBR1 (Phototropin-1B OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1B PE=1 SV=2) HSP 1 Score: 238.4 bits (607), Expect = 8.2e-62 Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy Swiss-Prot
Match: O48963 (Phototropin-1 OS=Arabidopsis thaliana OX=3702 GN=PHOT1 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55 Identity = 118/223 (52.91%), Postives = 144/223 (64.57%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy TrEMBL
Match: A0A5A7UXC5 (Phototropin-2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G002180 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.1e-120 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy TrEMBL
Match: A0A5D3BX38 (Phototropin-2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00330 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.1e-120 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy TrEMBL
Match: A0A1S4E3K0 (phototropin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500484 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 7.6e-119 Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy TrEMBL
Match: A0A1S3CHE3 (phototropin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500484 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 7.6e-119 Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of Cmc01g0009901 vs. ExPASy TrEMBL
Match: A0A0A0K305 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029980 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114 Identity = 204/214 (95.33%), Postives = 209/214 (97.66%), Query Frame = 0
BLAST of Cmc01g0009901 vs. TAIR 10
Match: AT5G58140.2 (phototropin 2 ) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76 Identity = 137/210 (65.24%), Postives = 166/210 (79.05%), Query Frame = 0
BLAST of Cmc01g0009901 vs. TAIR 10
Match: AT5G58140.1 (phototropin 2 ) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76 Identity = 137/210 (65.24%), Postives = 166/210 (79.05%), Query Frame = 0
BLAST of Cmc01g0009901 vs. TAIR 10
Match: AT5G58140.3 (phototropin 2 ) HSP 1 Score: 249.2 bits (635), Expect = 3.3e-66 Identity = 119/176 (67.61%), Postives = 142/176 (80.68%), Query Frame = 0
BLAST of Cmc01g0009901 vs. TAIR 10
Match: AT3G45780.1 (phototropin 1 ) HSP 1 Score: 218.0 bits (554), Expect = 8.1e-57 Identity = 118/223 (52.91%), Postives = 144/223 (64.57%), Query Frame = 0
BLAST of Cmc01g0009901 vs. TAIR 10
Match: AT3G45780.2 (phototropin 1 ) HSP 1 Score: 218.0 bits (554), Expect = 8.1e-57 Identity = 118/223 (52.91%), Postives = 144/223 (64.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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