Cmc01g0009381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0009381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr01: 4068013 .. 4068399 (+)
RNA-Seq Expression	Cmc01g0009381
Synteny	Cmc01g0009381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGGCTAGATCTAAAGAAGGTATTTTCGTGTCTCAAAGAAAATACACCCTTGATTTGCTAATCGAGACAGGTATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGTTGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCATGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAATGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGA

mRNA sequence

ATGGAGATGGCTAGATCTAAAGAAGGTATTTTCGTGTCTCAAAGAAAATACACCCTTGATTTGCTAATCGAGACAGGTATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGTTGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCATGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAATGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGA

Coding sequence (CDS)

ATGGAGATGGCTAGATCTAAAGAAGGTATTTTCGTGTCTCAAAGAAAATACACCCTTGATTTGCTAATCGAGACAGGTATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGTTGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCATGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAATGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGA

Protein sequence

MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRLVGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKTIEAYTDSD

Homology

[Close]

BLAST of Cmc01g0009381 vs. NCBI nr
Match: KAA0048527.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 243.8 bits (621), Expect = 8.0e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSK GIFVSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1013 MEVARSKYGIFVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1072

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1073 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1132

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1133 IEAYTDSD 1140

[Close]

BLAST of Cmc01g0009381 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1301 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1360

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1361 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1420

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1421 IEAYTDSD 1428

[Close]

BLAST of Cmc01g0009381 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-22
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            +E  R   G+ +SQR+Y LDLL  T M+  +P  TP+  + KL         D  +Y+ +
Sbjct: 1189 IEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGI 1248

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VG L YL+ TR DIS+ V+ +SQFM  P E+H++A+ RILRYL  TP   +  +K N  +
Sbjct: 1249 VGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLS 1308

Query: 121  IEAYTDSD 129
            + AY+D+D
Sbjct: 1309 LHAYSDAD 1316

[Close]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-21
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLG-NSVDQVPVDKEQYQR 60
            +E  R  +G+ +SQR+YTLDLL  T ML  +P  TP+  + KL  +S  ++P D  +Y+ 
Sbjct: 1172 IEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRG 1231

Query: 61   LVGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRK 120
            +VG L YL+ TR D+S+ V+ +SQ+M  P + H  A+ R+LRYL  TP   +  +K N  
Sbjct: 1232 IVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTL 1291

Query: 121  TIEAYTDSD 129
            ++ AY+D+D
Sbjct: 1292 SLHAYSDAD 1299

[Close]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.2e-16
Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 9   GIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRLVGKLIYLS 68
           G+F+SQ KY   +L   GML C+P  TP+        S  + P D   ++ +VG L YL+
Sbjct: 53  GLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLT 112

Query: 69  HTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKTIEAYTDSD 128
            TR DIS+ V++V Q M  P     + + R+LRY+K T    L   K ++  ++A+ DSD
Sbjct: 113 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-12
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 5    RSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVD------KEQYQ 64
            R+   +++SQ KY   +L    M   +P  TP+  + KL   +    V+      K  Y 
Sbjct: 1053 RTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYS 1112

Query: 65   RLVGKLIY-LSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTN 124
              VG L+Y +  TR DI+  V VVS+F++ P ++H EAV  ILRYL+ T G  L F  ++
Sbjct: 1113 SAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD 1172

Query: 125  RKTIEAYTDSD 129
               ++ YTD+D
Sbjct: 1173 -PILKGYTDAD 1182

[Close]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07
Identity = 28/76 (36.84%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 53  DKEQYQRLVGKLIYLSHT-RHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWL 112
           D   YQ +VG+L++ ++T R DIS+ VS++S+F++ P   H+E+  R+LRYL  T    L
Sbjct: 179 DITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCL 238

Query: 113 MFRKTNRKTIEAYTDS 128
            +R  ++  +  Y D+
Sbjct: 239 KYRSGSQLALTVYCDA 254

[Close]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL
Match: A0A5A7U2P7 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001490 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSK GIFVSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1013 MEVARSKYGIFVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1072

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1073 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1132

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1133 IEAYTDSD 1140

[Close]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 121/128 (94.53%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1    MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
            ME+ARSKEGI VSQRKYTLDLL ETGMLGCRPADTPIEFNCKLGNS DQVPVDKEQYQRL
Sbjct: 1327 MEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRL 1386

Query: 61   VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
            VGKLIYLSHTR DISF VSVVSQFMQAPYEKHMEAVNRILRYLKNTPGK LMFRKTNRKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 121  IEAYTDSD 129
            IEAYTDSD
Sbjct: 1447 IEAYTDSD 1454

[Close]

BLAST of Cmc01g0009381 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 1   MEMARSKEGIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRL 60
           +E+ARS  GI + QRKY LDLL ETG+LGC+P+  P++ +           VD + Y+RL
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381

Query: 61  VGKLIYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKT 120
           +G+L+YL  TR DISF V+ +SQF +AP   H +AV +IL Y+K T G+ L +       
Sbjct: 382 IGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441

Query: 121 IEAYTDS 128
           ++ ++D+
Sbjct: 442 LQVFSDA 448

[Close]

BLAST of Cmc01g0009381 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 9   GIFVSQRKYTLDLLIETGMLGCRPADTPIEFNCKLGNSVDQVPVDKEQYQRLVGKLIYLS 68
           G+F+SQ KY   +L   GML C+P  TP+        S  + P D   ++ +VG L YL+
Sbjct: 53  GLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLT 112

Query: 69  HTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKTIEAYTDSD 128
            TR DIS+ V++V Q M  P     + + R+LRY+K T    L   K ++  ++A+ DSD
Sbjct: 113 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc01g0009381 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07
Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 65  IYLSHTRHDISFVVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKWLMFRKTNRKTIEAY 124
           +YL+ TR D++F V+ +SQF  A     M+AV ++L Y+K T G+ L +  T+   ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 125 TDSD 129
            DSD
Sbjct: 61  ADSD 64

The following BLAST results are available for this feature:

BLAST of Cmc01g0009381 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048527.1	8.0e-61	94.53	transportin-3 isoform X1 [Cucumis melo var. makuwa]	[more]
TYJ99952.1	1.0e-60	94.53	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	1.0e-60	94.53	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	1.0e-60	94.53	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	1.0e-60	94.53	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0009381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	5.8e-22	41.41	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.8e-21	41.09	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	6.2e-16	36.67	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	2.4e-12	35.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P25600	3.1e-07	36.84	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc01g0009381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2P7	3.9e-61	94.53	Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3BJK7	5.1e-61	94.53	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	5.1e-61	94.53	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	5.1e-61	94.53	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	5.1e-61	94.53	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc01g0009381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-24	42.52	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.4e-17	36.67	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	4.2e-07	39.06	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 35..128
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 35..128
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 10..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0009381.1	Cmc01g0009381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding