Cmc01g0006921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0006921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	E3 ubiquitin-protein ligase RMA1H1
Location	CMiso1.1chr01: 2546451 .. 2549009 (+)
RNA-Seq Expression	Cmc01g0006921
Synteny	Cmc01g0006921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTTATAATCTCTCCTTCAACATTTCTTCTCTCAATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGACCCTTAATTCTCTCTTTCTCTTTTATTTTTGTGATAATTTTTCCATTGGAGCTCTCTGATTTTGCTGCACCAAGTTTCATATCCCTAAATTTTGCAACCCTTCTTCTCAAATCGAATCGACTAATTTCCCTCCTCTTAAATTTTGTTTGGTACGTTCTCAACTTTGAGGATTGTTTTTTATGAAGGGTTCTTCGTCCAAAAGGGTTTTCCACTCCCTTTTTAAATTGGACCATTTGTTCATTTGTTAATGAATTTGGTTTTTTCTTTTTGTGTTTTCGTTAGGAATTTATAGACTGTTTTTAATTGGAAAAAGGATTGGTTAACTCATAATTCTAAGTGTCAAGTGCTGAATGGATGTTTGGATCTTTATACTCTTCTGAGATTTTGTGTTTTATTTGTTTATTTACTTGATTTCTGCGTGATTGGCTTTTGATCTGTTTTCAATTGTTTGAAATATTTTAGCCTTTTTCGGTAAATATTTTGTTCTTTTGTTTTTGTTTTTTTGCCATCTCTGTTCGCATCTTTCCAAAATATAATATCTGAATTGTTAGTCAAATTTCAAAAAACAAAACAACTTTTTAAAACTATTTTTTTTAGTTTTTAAACTTTGGCCTTGATTTTCAAATCATTGGTAGAATGTAGATAACAAAGAAATAAGGTTGGAGATGACAATAGTGCTTGTAAGCTTAATTTTTCTTTTTGAAAAAAAGCAAAGGCAGCGAACAAAATACTTATCAGATAGATTATTAGAAATTTGGATGTTTAAGTAAAGATAGTTGATTAAGGTTAGCATTAAGAAAAGAATAATTTTAAAATCTAGATTTCACTGTTTCATTTTTTGCCCCAAACAATGTTTACTGGCATGTTTTAAATATTTTTGAAGATCTAAGTGCAAGATTCAGAGTATTTTGTTGAATAGTTTTGAAAAGTTTGAGTAATATTACAACTTTTCTTATAAAAAAGACTTAAATATTTGTCAAAAGTTAAAGGGAATTGTATATAATTATAAGGAGAGGTAATTGGGCAGTTGGGAAATAGCTCTAAATCTTATGTCTTTATCAGACGACTCATATGCCCATACTCAAGAATCGCTAGAGCTGACACTGCGATGTTTGTTTAATTAATTTCTACTAATTAAATTTTGGAATAGTTCAACATTTATTTATGTTGGATCTGGATATGATGCGTAGTTTTAATCAAAATATCTTTCTAGAAGGTCAACTTGCAAATAACATTTAAATATCTGATTGGCCCTTTTGCCTTAACCTCTCTAGGTAGAAGCATTAACCATGGGTTTGTCTTTATAATATTCTAAAAGGCATATAACTCTTGCTCTTATCTCTTTGTTCTCATCATTCCTTGTACTTCAAGGCATTGATTTTTCTAAAAAAGGGAGAACCAAAAAAAAGTTCATCTTCTTCATGTAAACATATATTTACTATTCTTTGCTATTCTATTCCATTTACATTCTCTGTTGCTTCAAACATCTAGTGGTTGTTTGATCTTTCTAGTTTTCTGGGTTTTGATCCAATATTGATGTAAATTTCTCTATGTTTTGGCAGTTCAGGTATCTCATAAGGGTTGTGTTACAACAAAGAATATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAACAAATCTTCTCTAGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCATCTGGGCTATTTGATTGTAATATATGCTTGGAGACAGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTTCCAGGACAGCTCTTTAGAGAAACAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCTGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAAATCCACTCGAAAGCAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTTGAGTCACCAAGGCCAACTTCTCACCCAACATCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAGTTCAGATTCTTCTGATCAATCAAATGTTTACTATGCTCAAGTGACAGGAGCGTTTGGAGAAGTGGTTTATGCGAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCGTATCCTCTTGTGTGGAGCAGTAGTCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGTATTTTTCTTTTCTGTTGTTTAATTATATGTCTTCTTTTGTTCTGAGCCATAGATTTTCACTTTACTTTCCGACCCATTGTATAAATTTTGGTGGCGATTGGTTGCCCCTTTCTGGCCCTTGTTTCTGTAGTTGGTGTAAATAAGAATTTTGTTGTAGCCTCATTATGTGGGCTTCTATTACATTCTTGACTCTTGAACTGGTCTT

mRNA sequence

GCCTTTATAATCTCTCCTTCAACATTTCTTCTCTCAATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGACCCTTAATTCTCTCTTTCTCTTTTATTTTTGTGATAATTTTTCCATTGGAGCTCTCTGATTTTGCTGCACCAAGTTTCATATCCCTAAATTTTGCAACCCTTCTTCTCAAATCGAATCGACTAATTTCCCTCCTCTTAAATTTTGTTTGTTCAGGTATCTCATAAGGGTTGTGTTACAACAAAGAATATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAACAAATCTTCTCTAGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCATCTGGGCTATTTGATTGTAATATATGCTTGGAGACAGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTTCCAGGACAGCTCTTTAGAGAAACAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCTGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAAATCCACTCGAAAGCAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTTGAGTCACCAAGGCCAACTTCTCACCCAACATCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAGTTCAGATTCTTCTGATCAATCAAATGTTTACTATGCTCAAGTGACAGGAGCGTTTGGAGAAGTGGTTTATGCGAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCGTATCCTCTTGTGTGGAGCAGTAGTCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGTATTTTTCTTTTCTGTTGTTTAATTATATGTCTTCTTTTGTTCTGAGCCATAGATTTTCACTTTACTTTCCGACCCATTGTATAAATTTTGGTGGCGATTGGTTGCCCCTTTCTGGCCCTTGTTTCTGTAGTTGGTGTAAATAAGAATTTTGTTGTAGCCTCATTATGTGGGCTTCTATTACATTCTTGACTCTTGAACTGGTCTT

Coding sequence (CDS)

ATGGAAATGGAACAGTACTTTGAGGAGGCCAGCATCCAGATTAATTCATTTGGAGAGAACAAATCTTCTCTAGAAAATTGGAAATCTGTTTTGGATGCCATGGCTGAAACTCATTGTGATGCATCTGGGCTATTTGATTGTAATATATGCTTGGAGACAGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGTTGGCCTTGCATTTATAAATGGATTCATTTCCAGGACAGCTCTTTAGAGAAACAAGCTCGACGACTCCCGCAATGTCCTGTTTGTAAGGCTGAAGTTTCTGATGCTACTCTAGTCCCACTTTATGGCAAAGGTGAAACTCAAAATCCACTCGAAAGCAAGAATCCACAGCTTGGAATCGTGGTCCCTCGTAGGCCTCAGGGTCCTGCTTGCTTTGAGTCACCAAGGCCAACTTCTCACCCAACATCTCACACAGTTGGTCCTCAATTCAGGGAAGGAAGTTCAGATTCTTCTGATCAATCAAATGTTTACTATGCTCAAGTGACAGGAGCGTTTGGAGAAGTGGTTTATGCGAGAATGTCGGGTGCGATAACGAATCTATATGCGTATCCGAATTCGTATCCTCTTGTGTGGAGCAGTAGTCCAAGGATTAGAAGGCATATTTTGCAGACAGATGAATCACTCAACAGAATATGTATTTTTCTTTTCTGTTGTTTAATTATATGTCTTCTTTTGTTCTGA

Protein sequence

MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESKNPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGEVVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF

Homology

[Close]

BLAST of Cmc01g0006921 vs. NCBI nr
Match: XP_008455327.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455329.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >KAA0031578.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK07030.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa])

HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of Cmc01g0006921 vs. NCBI nr
Match: XP_011658745.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KAE8645771.1 hypothetical protein Csa_020520 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 229/239 (95.82%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKWIH+QDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG+SDS+DQSNVYYA++TG FGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICL+LF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 239

[Close]

BLAST of Cmc01g0006921 vs. NCBI nr
Match: XP_038888270.1 (E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida])

HSP 1 Score: 467.2 bits (1201), Expect = 8.3e-128
Identity = 224/239 (93.72%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKW+H+QDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKG+T++  ESK
Sbjct: 61  LCGHLFCWPCIYKWLHYQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGKTRDSFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           N QLGIVVPRRP GPACFESPRPTSHPTSHTV PQ+R+G+SDSSDQSNVYYA++TGAFGE
Sbjct: 121 NTQLGIVVPRRPHGPACFESPRPTSHPTSHTV-PQYRQGNSDSSDQSNVYYAEMTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 238

[Close]

BLAST of Cmc01g0006921 vs. NCBI nr
Match: XP_022147841.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 3.9e-109
Identity = 197/239 (82.43%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKW+HFQDSS EKQ ++  QCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           N QLG+VVPRRPQGP C E+ RPTSH       PQFR G+S S   SN YYAQ+TG FGE
Sbjct: 121 NSQLGVVVPRRPQGPGCSETSRPTSHS-----APQFRRGNS-SDQSSNNYYAQMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           ++YARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 181 MIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of Cmc01g0006921 vs. NCBI nr
Match: XP_022988938.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988940.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 200/239 (83.68%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEE    INSFGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKW+HFQDSS EKQ +RL QCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           N QLGIVVPRRPQGPACFESPR TSHP       QF++G  + SDQSN+YYA+  G FGE
Sbjct: 121 NSQLGIVVPRRPQGPACFESPRATSHPVL-----QFQQG--NLSDQSNIYYAE--GVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           +VYARM GAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCC IICLLLF
Sbjct: 181 MVYARMFGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-55
Identity = 119/244 (48.77%), Postives = 152/244 (62.30%), Query Frame = 0


Query: 16  SFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWI 75
           +F ++ + L  WKS+ D + E   + SG FDCNICL+ V +PV+TLCGHL+CWPCIYKWI
Sbjct: 13  TFNKHDTPLGKWKSMNDEVEE---NISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWI 72

Query: 76  HFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGK-GETQNPLESKNPQLGIVVPRRPQG 135
           +FQ  S E   ++ PQCPVCKAEVS+ TL+PLYG+ G++  P E K P LGIV+P+RP  
Sbjct: 73  YFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPS 132

Query: 136 PAC---FESPRPTSHPT-----------SHTVGPQFREGSSDSSDQSNVYYAQVT----G 195
           P C   F  P   S+P+           S T  P + +GS  SS   +   A        
Sbjct: 133 PRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAY-QGSYMSSPMLSPGGATANMLQHS 192

Query: 196 AFGEVVYARMSG-AITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIIC 240
             GEV YAR+ G + T +Y YPNSY L  SSSPR+RR + Q D SL RIC FLFCC + C
Sbjct: 193 MIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTC 252

[Close]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.1e-41
Identity = 104/263 (39.54%), Postives = 146/263 (55.51%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 SKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGSSDSSDQSNVYYAQVTGAFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             SS+S   S V    V    GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAV-LDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

[Close]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-35
Identity = 86/218 (39.45%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 42  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSD 101
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKW+H Q SS+     +   CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ-NNCPVCKSNITI 98

Query: 102 ATLVPLYGKGETQNPL---ESKNPQLGIVVPRRPQGPACFESPRPTSHPTS-----HTVG 161
            +LVPLYG+G +         K   L   +PRRP  P+   +P  ++   +      T+ 
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITSASSLNPSLQHQTLS 158

Query: 162 PQFRE--------GSSDSSDQSNV----YYAQVTGAFGEVVYARMSGAITNLYAYPNSYP 221
           P F           +++S+D +N     +   V G FG++VY R+ G  TN  A P    
Sbjct: 159 PSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ-- 218

Query: 222 LVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
                     + ++Q ++SLNR+ IF  CC+I+CLLLF
Sbjct: 219 ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34
Identity = 88/211 (41.71%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 37  THCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEK-----QARRLPQ 96
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++       R  P+
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 97  CPVCKAEVSDATLVPLYGKGETQNPLESKNPQLGIVVPRRPQGPACFESPRPTSHPTSHT 156
           CPVCK++VS+ATLVP+YG+G+       K PQ G  VP RP GP                
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVY----------DLRG 130

Query: 157 VGPQFREGSSDSSDQSNVYYA--QVTGAFGEVVYARMSG-AITNLYAYPNSYPLVWSSSP 216
           VG +  EG S    Q  +Y     V G   E+VY R+ G + +N+  Y +        + 
Sbjct: 131 VGQRLGEGES----QRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRD-------MNV 190

Query: 217 RIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           R RR  +Q +ESL+R+ +FL C + +CL LF
Sbjct: 191 RSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot
Match: Q99942 (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-18
Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 41  ASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVS 100
           A   F+CNICLET ++ VV++CGHL+CWPC+++W+   ++  E+Q     +CPVCKA +S
Sbjct: 21  AGATFECNICLETAREAVVSVCGHLYCWPCLHQWL---ETRPERQ-----ECPVCKAGIS 80

Query: 101 DATLVPLYGKGETQNPLESKNPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG 160
              +VPLYG+G +Q P + +     +  P RPQG       R    P   T G  F  G
Sbjct: 81  REKVVPLYGRG-SQKPQDPR-----LKTPPRPQGQRPAPESRGGFQPFGDTGGFHFSFG 125

[Close]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL
Match: A0A1S3C1W7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.2e-137
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL
Match: A0A5A7SLT9 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003470 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.2e-137
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK
Sbjct: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL
Match: A0A0A0K717 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047460 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 199/215 (92.56%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT
Sbjct: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKWIH+QDSSLEK+ARRLPQCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREG+SDS+DQSNVYYA++TG FGE
Sbjct: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHIL 216
           VVYARMSGAITNLYAYPNSYPLVWS    I R +L
Sbjct: 181 VVYARMSGAITNLYAYPNSYPLVWSMLVAIGRPLL 215

[Close]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL
Match: A0A6J1D3G6 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111016683 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109
Identity = 197/239 (82.43%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKW+HFQDSS EKQ ++  QCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           N QLG+VVPRRPQGP C E+ RPTSH       PQFR G+S S   SN YYAQ+TG FGE
Sbjct: 121 NSQLGVVVPRRPQGPGCSETSRPTSHS-----APQFRRGNS-SDQSSNNYYAQMTGVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           ++YARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 181 MIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL
Match: A0A6J1JKZ9 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486145 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.5e-109
Identity = 200/239 (83.68%), Postives = 212/239 (88.70%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVT 60
           M+MEQYFEE    INSFGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVT
Sbjct: 1   MDMEQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVT 60

Query: 61  LCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESK 120
           LCGHLFCWPCIYKW+HFQDSS EKQ +RL QCPVCKAEVSDATLVPLYGKGETQ+P ESK
Sbjct: 61  LCGHLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESK 120

Query: 121 NPQLGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGE 180
           N QLGIVVPRRPQGPACFESPR TSHP       QF++G  + SDQSN+YYA+  G FGE
Sbjct: 121 NSQLGIVVPRRPQGPACFESPRATSHPVL-----QFQQG--NLSDQSNIYYAE--GVFGE 180

Query: 181 VVYARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           +VYARM GAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCC IICLLLF
Sbjct: 181 MVYARMFGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of Cmc01g0006921 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-42
Identity = 104/263 (39.54%), Postives = 146/263 (55.51%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 SKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGSSDSSDQSNVYYAQVTGAFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             SS+S   S V    V    GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAV-LDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

[Close]

BLAST of Cmc01g0006921 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-42
Identity = 104/263 (39.54%), Postives = 146/263 (55.51%), Query Frame = 0


Query: 1   MEMEQYFEEASIQINSFGENKSSLENWK--SVLDAMAETHCDASGLFDCNICLETVKDPV 60
           M ++Q FE+A++    +GE     ++ K   +  ++     D S  FDCNICL++V++PV
Sbjct: 1   MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSN-FDCNICLDSVQEPV 60

Query: 61  VTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLE 120
           VTLCGHLFCWPCI+KW+  Q  S   + +R  QCPVCK++VS +TLVPLYG+G      E
Sbjct: 61  VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEE 120

Query: 121 SKNPQLGIVVPRRPQGPAC---------------------FESPRPTSHPTSHTVGPQFR 180
            KN      VP+RP GP                       F SP+   +P S  +     
Sbjct: 121 GKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVM----- 180

Query: 181 EGSSDSSDQSNVYYAQVTGAFGEVVYARMSGA-ITNLYAYPNSYPLVWSSSPRIRRHILQ 240
             SS+S   S V    V    GE+V  R+ G  + + +AYP++Y L  +S PR+RR I+Q
Sbjct: 181 --SSNSLSYSAV-LDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQ 240

[Close]

BLAST of Cmc01g0006921 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-36
Identity = 86/218 (39.45%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 42  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSD 101
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKW+H Q SS+     +   CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ-NNCPVCKSNITI 98

Query: 102 ATLVPLYGKGETQNPL---ESKNPQLGIVVPRRPQGPACFESPRPTSHPTS-----HTVG 161
            +LVPLYG+G +         K   L   +PRRP  P+   +P  ++   +      T+ 
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITSASSLNPSLQHQTLS 158

Query: 162 PQFRE--------GSSDSSDQSNV----YYAQVTGAFGEVVYARMSGAITNLYAYPNSYP 221
           P F           +++S+D +N     +   V G FG++VY R+ G  TN  A P    
Sbjct: 159 PSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ-- 218

Query: 222 LVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 240
                     + ++Q ++SLNR+ IF  CC+I+CLLLF
Sbjct: 219 ---------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of Cmc01g0006921 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 145.6 bits (366), Expect = 5.2e-35
Identity = 88/211 (41.71%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 37  THCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHFQDSSLEK-----QARRLPQ 96
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++       R  P+
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 97  CPVCKAEVSDATLVPLYGKGETQNPLESKNPQLGIVVPRRPQGPACFESPRPTSHPTSHT 156
           CPVCK++VS+ATLVP+YG+G+       K PQ G  VP RP GP                
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVY----------DLRG 130

Query: 157 VGPQFREGSSDSSDQSNVYYA--QVTGAFGEVVYARMSG-AITNLYAYPNSYPLVWSSSP 216
           VG +  EG S    Q  +Y     V G   E+VY R+ G + +N+  Y +        + 
Sbjct: 131 VGQRLGEGES----QRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRD-------MNV 190

Query: 217 RIRRHILQTDESLNRICIFLFCCLIICLLLF 240
           R RR  +Q +ESL+R+ +FL C + +CL LF
Sbjct: 191 RSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Cmc01g0006921 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 4.8e-25
Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 18  GENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWIHF 77
           GE+ +S     S  D+  +T+ D  G F+CNIC E  +DP+VTLCGHLFCWPC+Y+W+H 
Sbjct: 4   GESSTS----TSYSDSNNDTN-DQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHH 63

Query: 78  QDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESKNPQLGIVVPRRPQG 135
              S E        CPVCKA V D  LVPLYG+G+ Q    SK    G+ +P RP G
Sbjct: 64  HSHSQE--------CPVCKAVVQDDKLVPLYGRGKNQTDPRSKR-YPGLRIPNRPTG 106

The following BLAST results are available for this feature:

BLAST of Cmc01g0006921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455327.1	1.3e-136	100.00	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PRE...	[more]
XP_011658745.1	1.1e-132	95.82	E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquiti...	[more]
XP_038888270.1	8.3e-128	93.72	E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida]	[more]
XP_022147841.1	3.9e-109	82.43	E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3...	[more]
XP_022988938.1	1.1e-108	83.68	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ub...	[more]

BLAST of Cmc01g0006921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	7.5e-55	48.77	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	6.1e-41	39.54	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	2.9e-35	39.45	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	7.3e-34	41.71	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q99942	5.6e-18	40.34	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]

BLAST of Cmc01g0006921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1W7	6.2e-137	100.00	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 ...	[more]
A0A5A7SLT9	6.2e-137	100.00	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0K717	1.1e-114	92.56	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047460 P...	[more]
A0A6J1D3G6	1.9e-109	82.43	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1JKZ9	5.5e-109	83.68	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]

BLAST of Cmc01g0006921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	4.4e-42	39.54	RING membrane-anchor 1	[more]
AT4G03510.2	4.4e-42	39.54	RING membrane-anchor 1	[more]
AT4G27470.1	2.1e-36	39.45	RING membrane-anchor 3	[more]
AT4G28270.1	5.2e-35	41.71	RING membrane-anchor 2	[more]
AT2G23780.1	4.8e-25	47.86	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..165
None	No IPR available	PANTHER	PTHR12313:SF59	E3 UBIQUITIN-PROTEIN LIGASE RMA1	coord: 3..239
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 45..97 e-value: 3.01752E-23 score: 86.5892
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 46..101
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 47..95 e-value: 3.1E-10 score: 50.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 47..96 score: 13.182669
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 2..119 e-value: 6.5E-18 score: 66.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 47..95 e-value: 8.1E-10 score: 38.4
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 3..239
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 62..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0006921.1	Cmc01g0006921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity