Cmc01g0004171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0004171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	GATA type zinc finger transcription factor family protein
Location	CMiso1.1chr01: 898088 .. 914915 (+)
RNA-Seq Expression	Cmc01g0004171
Synteny	Cmc01g0004171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTGTCTCTCCTTTGTTTGGCTGCCGAGAAAATCAGGGAAAACATTTCTTCTTCTTCTTTCTATCGATCGAAGTTAATCAGTTCATTTCGAACTGCTTAAATCGCTACTGCAATGGCGAAAGCTCATTCGGCGTGTATCACTCAAGGTTGGCAACTTAGAAATTTATAGCACAAACGAAATCGCTTGCTGTTTGAACTGTTTAGCTTATGCCTTTCTTTTCTGTATTTTGTCTACTTGCTTTGTATGTGTTTGGGGCGTTAGATGTGAATTCATATGTTTAACTCATGCTGCAATTTCATTTGCCGCCTTTCTTTTCTCTATTTAGTCTAGTTGCTTTTTCTTGAACTTGGAACGTCTGCTATGATTCTTGATGCGAGATACGGAATGCTGCCATTTCGGCTGGAGATTCTTAGCTTATTCATTTTCTTTCTGTCAGTACGTATGGAACTGCTAATCGATGGTGGAAGATGATACGAGGTGTATTTAGAGGTTAGAAATTAAAAGCACACCTGAAATTAATTACTGATTTTTTGTTTTTTTTTTTTTTCTCTTTTGCGGTTTATTTTGTAGCTTCTTCTTCTTCGATGTATTTGTTTTTCCTGAATGCAATCGGTTTGGCAGATTAACTTCTGTTTTAGTTTTCGTTTTTTTTTTGTTCTGTTTATTGATTTTGTTGAAGATAATAATTGTGCATTTTGGTTGATGAATTTTAGGGAAGTTTAGAATACACTGCTAGATGAATTCTTGGCTTGCTTTTCCTTAGTTTGCATTTTACTTCTATATGTTCAAATTTAACGATCGGCTTTCCATCTGCTATATATGGCAATATATAGACGATGTTACGGTTTAGAACTTAATGCATCGATGTGTAAAAAATTATAGTAAGATCATCGAGCGTGTATTTGTGTACGTTTCAATGCTTCAAGGAAATGTTATTGTTTGCTTGGCTCGTGGTTGATAGTGATGGAACATTTGAGTACTTGTACAATGTTAGGATACTCAGCCTGTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTTTTTGGATTCAGATGATATATTTCTATTCTTATTTTTCATTGAACTCCTAGAAGGAGAAGTGTTGATTCAATGCAAGGAGGCGACTAGGTTAGGCAAACATTTGGTGAATGAGCTGTTAATTCAGTAGCCCCATTGTTGTAACTTATATTGACAAGAATGCTGGTTTATTTTCATTTTTCATTCTTATTAGTCTAGTTGGATTCAGAAGATCCCTGGCTAGGAAGAAAGTGGGATTATTGGTGGACTATTAGTAGGTTATTAGAAGGGGCATACTTGTATATAGGTTGTAAGTTTGTTAGAGCTTTTAGTTATAAATAAAGGGAGTGAGTTGAGAGCTAGGTGTGAACAATTTTGTGGGATTTCCTTTGGGGAATTTAGGAGAGTATGCCTCTGAAGGCTCCGCTATATCGTAACTTCTTTAGATATTGCAATTTGAAATTATCTTTTAGTGTTCTTTGTTGTTCTTGAGTATTATTGTTAGGCTGTATCTTAACATATTATTTAGAAAAATATCAGAATATGAAGTTAGAAAGTTCCAATATTAATGGGCATTCATAGTATCAAACTTGGAACCTCTAGCGCCCAAAATAACAGTAATCCTACTTTCTTCCTTAGCCTTATGAAATTACCTTCGTCGGCTCTCTATACAATCTATCTTGGACTGGGCTATATTTGGATAAATCACTGAATTACCTTATTGTCAGTATCTACTGTTTCTGCAGTTGTAAGTTTTAAACCTTAACCTGACTCAATTTGGATTCTGCAAAATTTATTATAGCGGACAGAAAGGGATGAAGGTAGTAACAAATAAGGGGGAAGGGGGAAATGCTCAAATTTATTTACCATTTTTCAGGTTGTATTTCACTTGATGTTCTCAGTTTTGAATTTATATGTCATTGGGATTTAAAAATTTATATGTCTAATTAGCTATTCTCACTTCCAAGATTCCAACCAAGCTTTAGCTTTGCTACCTTTTTCCCATAGAGTTAATTCTCTAGATGCTTTTTTAGGACTACATATAATACAGTAGAATGGATACTGACTTTTATCTTATTTCATATCTTCTCTAAACTGTTGGTATATATTTTAAGATGTTAATATAATATATAATATATATATATATATATTTCCTGAAACTAAATTTGTAGTTAATTGTGTTGGGATTCAAGCAAGACTTTTGGAGTTCGAAATTAAATTCATCACTCAGAATTATTTGATAGGCTATTTGCTTCTTTTGTTTCACTACTATTGTTTTGCTAATTGACTTGTCTTGGCCATTGGGCTGCAATGGCAAAATTAACTATATTGCAATACGTTAGTTGAATATGGAGTATTACTGCAAACCATAAGCCTTCCAAGAATAATATATCTGACCTATTGTGGCTTCAGTTTATCCGTAATTTTGTGAAAGAACTCTTTTAAAACCTAACTCTGAATCTTCTTACTAAATGAAGACTATCATTAATAACTTCTATTTTTAAGAGTTTAAGTCAGTTCATTCTGCAGCGTTCTTCTGAGCATATTTTACTATCTCATCTGAGGATCTTCTCATACTTGATGCATTTCCTGCCTTTGACATATGCTAAATTTTGTTAAAGATCTTTCGACTTCTTCCTTCTAGAGAGAGTTGAAACCTTTCACCTGAAAAGAGATTAATATTGAAAGCTATCAATTTTTCATTTCTAACAAACCCATTTGCCGTGCTTTTTTGACACACACAAATTTTTTTTGAGTGTCTGTTGAGTCAGTTGTCCTAGTTCTAGAGAACTTCAAAATTTTGAATACTCGATATTAAAACTGTCTACAATGTTCCAACCTATGCATTATAACGATGAACTTGCAACAATGAATTTCACGACTTTTTAGTTTTCAACTTTCTTTCTCTTTCAGTATTTAATTTTTGACCTACCTGTACCTGTTAACTATTTGCGATTTCAATTCTAAAACATGGGATACAAAAATTTTTTTCCTTGAAGTTTGGGAAAAACTAGTGGGGCATTCCCACCCAAAGCGAGAATCATACCATTGGACCAAATGCCTTTCTTGTCCCCTATACTTGTCAGCACTCAGCAGTTGATTAGCATGTTCTCGTCGTCATATTAATATAGATATTATTTTTAAGTTTCAGTTTTCTAAAAGTCCATTATTGTTATTCCTTTTATATCTTAGTCTGACATCCTGGAACTTATTATTCAGAACAACCTCTTGGATGCTTGGTTAGTGTAAAACTGGAATGATAGGACTTGTCATCCAGATTATTTTATTTACCCTATATAGGAGATGTTGAGTTAGTAACTGAGGCAGGGGCATCAGGATGTATCAATAGTAGTACTTATGAAGTCCTTGCCGATCCTAAGTTTTCTTTTACTCATCATATAAACCTTTTGTACTGTGAGCTTTAGTCTCATTTACTTTTAATAAAAGAGACACGTTTCCCTTAAAAAAAGTCCTTGTAAGAGAGAGGCAATTTTGCTTATGATCTGATAGTGCAGTATAGGGAGAGATGAGAGCTCTTTGAATTTCCTTTAGGCTGTAATTCCCTGAAACTTTTTTTAATCTAGTGAATTTTATTATAGCAATTGTATCTTTCTAGTTTTTAGAAACATACCATTTCAAGTAATTATATTGTAGTGTGGTTCTGAGGTCATATAGTCAGGTGATGTGTTCCCATGCTTTTGGGTTTCCATAAAAACAAATATCAATGGTAAAACGGTATGCATGATGCACGATGTGTGTATAACTCTTCTTCTGTCTTTCTTTCCACCCAATAGCTTTCCTATGATGTTTCAATGACCTCTTGGGTCCTAAGTGAGATTCAAACGAAATGGTTAATGCTGTTATTCATTGTTGTTACTGAAATGGTTGATTTATCTGTTTCCATAAAGATTACAGGGGTTCTTCATCAGTTTTTAAAACTACTTATATAGTCAACTAGTGAATACATCAAGGACTTTCTTGCTGTCTGCTAGAATGGATTTCTGTTTCGATGGATAGAACATAGTGGAACAATCTAAACCTAGCAAAAATCAACAGAGTGGGACATATGTTGTATAGTAATCCTTTCCTGTCACAACGTGGATATCTAATATTGCTTAATGATTCTAACTGCTAACAGTAGCATAGCTCAACTAAAAATCATGGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTGTTGAAATCTAATTATTTTCCATTGTTATACAACATCTTTTTTTATACATATTTACTTTCTGTTTTCCCTGAAGTATGGAAAAAACTAGCGAGGCATTCCCACCCAAAGTGAGAATCATACCACTAGACCAAATGCCTTTCTTGTTCCCATACTTGTCAGCAGTTGATTAGCATGTTCTTGGCGTCATATTATTATAGATATTATTTTTAAGTTTCAGTTTTCTAGAAGTCCATTAGTGTTATTCCTTTTATATCTTAGTCTGACATCCTGGAACTTATCATTCAGAACAACCTCTTGTATGCTTGCTTAGTGTAAAACTGGAACGATGGAACTTATTATCATATTAGTTAATTTACCCTATATGGGAGATGTTGACTTAGTAACTGAGGCAGGGGCATCAGCATGTATCAATAGTAGTACTTAGAAAGTCCTTGCTGATCCTAAATTTTCTTTTGCTCAGTGTATAAACCTCTTGTACTATGAGCTGTAGTCTCATTTATTTTTAATAAAAGATACTTGTTTCCCTTAAAAAAAGTCCTTGTAAGCGAAGTGCAGTTTTGCTTATGGTTTGATAGTGCAGTATAAGGAGAGATGAGAGCTCTTTGAATTTCCTTTAGGCTGTAATTCCCTGAATTTCTTTTGAATCTAGTGGGTTTTATTATAGCAATTGTATCTTTCATGTTTTTAGAAACATACCATTTCAAGTAATTATATTGTAGTGTGGGTCTGAAGTCATATAATCAGGTGATGTGTTCCCATGCTTTTAGGTTTCCATAAGATCAAAGATCAATGGTAAAACTAGGCATGATGCATGATGTGTATTTAATAACTCTTCTTCTGTCTTTCTTTACACCCATTAAGCTTTCCTATAAAGTTTGAATGAGCTCTTGGGTCCTAAGTGAGATTCAAACGAAATGGTTAATTGCTGTTATTCATTGTTGGTACTGAAAGGGTTGATTTATCTGTTTCATAAAGATTACAAGGGTTTTTCATCAGTTTTTGAAACTACTTATATAGAATGGATTTCTGTTTTGATGGATAGAAACATAGTGGAACAATCTAAATCTAGCAAAATGCAACAGGGTGGGACATATGTTGTAATCCTTTCTTATTGCAACGTAGATATCTAATATTACTTAGAGACTCTAATTGCTAACATCACTGTAGCTCAGATGAAAAACATGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTGTTGAAATCTAATTATTGTCCTTTTTTATACATCTTTTTTATATTTACTTTCTGTTTTCCTTGAAGGTCTTTATTTTATCTATTTTCTACATCAGGATTGGCTTTCTGTAGGAGCATCACTATTATTTTATTCATTCAATTTGCATTTTCAGACATTGAAATTTTTACTATGACCATTTTAAACATTTGTATTTTCTGAAGATTGATCAATAAAGAAAGTGGATTTCAATGAATCCATGTGCAAGTATTACTATTTTATATTCTTAGATCTAGACAGCTGCAAAGCTTGATTATTCTCGAATCTTTTATACAGGAGTTTGTGTATGACCAAGGAAAGGAGAAAAAGCCGCTGAAGTTATTCCATAATAGAAGTTGTTTGAGAATTTCACCAAACCACACTTCCCGAGTACAAGTAAAACAACTTTAGAATGCCAAGATTTTTGATATGCATCTTGATTAATCAGAACCTATGGGGGGGTTGTTGCCTTTCGTTGAAGCATATTTGGTTTTTCTACGGTTCTGTACTAAAAGGGGATTGACGTTCAAGTCCTGATCTATGAAATGAAAACTATGGAATGATGATTTACAGTGTCTAAAACCAATTTATCGCCTGAACTTACAGCAATGTGAAACTAAGATGCTGGTTCTGCTGCTTATAAGATGCATCATGTTCCTCAGAGAAAGGGAAAAAAAAAAAAGAAAAGAATTTTCACAAACTAAGATGTAATCTCCATTTATTTTGTTTTTTTTTTTTTTTGAGAAAATGTAAATTCCCTTTATTACTGTAAACTTTAAAGTTGTTATATCCGTATGTAACTTCTGTCCCTTTTTCAGCCTTGCTGGCATGTGCGTGGACCGGTTGCTTCTACCTCAGAGAACTAATGATGGAAGGTGTGATTTATGAATCACTTAGCTTATGTTTTTATACTCTCTCCCATTTTGTTATTTTTATTTTTTAGTCTCTCTCCTAATAGTTCATTGATAAAAAAATGTGGGAAAATGATAAGGAGAATAAACTAGGAATTAAAAAAACAACTTTGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCAATGTTGGAAACCATTTTGAGTTAAAATTTTCCTGAACTAATAAATGCTAAACTTTTTAAAGACCAGCTAAATAGGGATACTATTTTTGGTGCTTGCTTTGATCTTGCCTGTGCTTCTTAATGAACAAAATAATTTCCCTAAATGAATAGTCTTTAAAAAAGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTGCATGAATTCATATATTTTATTTAATATGCGTCTTTTTTTCTCTCTATCCTGAAGCCTTATTTTCGTCCGTGTTTTATTCCAAAATTGACATTGTTGTATTTTTAAACTCATTATTGTTTGTTTGTTCAGTCCATGTGATCTGTCACAAACTGCAAATTGATTCTCATATTATTACAGAAAGTCGCGTGCTTCTTTCTAAAATATATATACACATGCGCTAAATATAAATATAACTTATTACTTTTAGGTCTAAACAGCCGCTAAATGAGATCATTCTCAACTTGATCATGCAGCCTCAGCCTCTCCAAAAATAAAAAAATATATAAAAAGACAGAAATAATTGTTATTACAGGGGTAGGCTACAGTGGATAGTGTGAGAATAGAAAGGACAGTGGAAGTCATTCCCTAACGTAAGTTGAAGGTTGAGAATTTCACCTGAACCACACGTTCTGAGCACAATATATTAAATTTAGAATGTCAAGATTCAGATAAGATTGTTGATTCATCTCAAAATTCAGATAAGATTGTCGATTCATCATGATCTTTTTTTGCTGCTGCTTGTTGAACAGTTTTATTACCCACGATCTCATATGTTTGAATTAGGAAGATTTTAATGGTGGTCTTTTGCTGTTGCTTTTATGGTAAATAAGGAGAGTGTCATATGACTAAGTTGTTAAAATTTGTTGAAGTTTAGTTTAGCAAACTTACTATTGTCATGTCATGTGTTAAACCACTATTTAGAGAATCAATCTCTTATGCACATTTTCAGCCCTGGTGAACATTTGGTACGGTTGCTTCTCTCTCTCTCTCAGAGAAACCGAGTTAAGGTATGTAAGAAAAGTATTTCCTCATATTGTAGGTCGTCTTTCTCTCTCTCTCCCCCGTATCCTTTTCCAAATTAGGAAAACATTTATAATTAACATGAAATGGACAAATAAGAGAATATAATAAAAAACATCATACTATTAAAAATGTAGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCAATGTTGACAGATATAATTTAGTTATTCTACTTGATGAAGTCTTCTACTTGTACTGGTTCATGCTTTCGATATCTGGGCTGCTTAAATTGAATAGTGGTCTTGCTGTTTTAGCTTCTATTTATGAACATCGAAAACACTTGTTTTTATGAATTTGGAAACCTAAGTGGGAGCATTCCTGAACGAGAATCATACCACTTTACGAACTGAAACTGCGCCTCTCTTTCTTTCTTTCCAATTTTATTTTTTTGAGTTTCCATGATTACATTTTGTACTTGGAGCACGAGGAGTTCTGCTGTCATGGATGAAAAACTTCCGTCCCATGGAAAATGGGAAGATATCAAGCAGGAACTAGAAAGAAGGGGCAATCACCCCATTGGGGTTCGATTAATCTACTTCATAAATACTTAACCAAGTGAGATGTTCAGGAATATCTAGTAGAATGAAACATCGGACCTCTTCATACTTTGAACATGGTTTCCCTGGTAAAATGGTCACTTTTTGTGAGTGAGGCTTTTTTTTTTTTTTTTTAAATTAACTTTTTATGTAATTCTAATTTACTCATTACTCACTAAAAAATTCTTTTTGGATGTTAAAAAAAAATTCTTTTCAGTTAGGTTCTTTTTGTAAAATGAAGGTATTAGAAATATAAATATTGCAAAAAATGAGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAATGCCCACTTCTGTGGATGGGATTTTCCGTTGCTGGTCTAGATGAGTTTCGATCTCATGTTTGAAGTTTATTCATACAGAAAAACTTTTGCTTTAGTTTTTTTAGAGCATTACAAAGATTGGATTTCATAACAAAGAAACTCTGGTGTTTGTAAGTTTAACTTTAAAAAATAAAAAAACTAAAAACTAAATGACAATCATAAGGATTTTAGTTTTTGGTTTTTGAAATTATGCTTGTTTTCTTTTCTCCTCACTTCCTTGCCATGTTTTTGTTGACTTCTTTACCTCAGTTTTCATTTTTCTACACTAAACATTTGAATTCTCTGCCTAATTTTAAAAACAAAAAGTTCTTAAAAAGATATTTTTTAGTTTTTAGAACTTGACTTCATTTTTTAAACCAACCTAGAAAGTATATAACAAAACAAATATATAATATAAAATCGATTCTTACGTTATAAAAAGAATCATAAAATTCGAGTGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTCCTCATGTTAGGGAATCCAATGTTTCATAAATTACTTCATCATCATTTTATAAATTCCATTTTATCTATCAAACGCGGAAATTTGTTCATCAAATCTCTATGACTTCGCTGACGATTGATCAATAAAGAAAGTGGTCATTAATGAAATCTATGTGCCAATGTTGCTATTTTATACCTTTTAGATCAAGACAGCTGCAAAGTTTGACTTTTCTCAAATTCGGTATACAGAAGTAGGTACATGCCAGTCAATTGGAAGAGAAGAAAATATTGATGGAAACTAATCCCTAATACAAATTCTAGTTTGAAAGTTTCACTTGAACCACACGTTTTGAACACACAAAGTAAACAAATATAGAATACTAAAGATTTGGTTAGACATGTTGATTAACATCTATATATTTTCAGTACCAAGAGTTAAGTTACTGCTTCTTACTGTTGCATTATTTACCAGTTCCTTCTACCTATAATCTCATTAGTTGAATTCACTTCCTGTGGGTTGGGTAGAAATATACAGTGCGATGAAGATGATGTTCAATGCTAGATCTATTAAAAGCTATTGCAGGTTTAAATATTATTTTGGTTATAAACTTATACTTCTTTGGGAATAATTAGTTTATTTAGATTCATGTACTTTCAACTTTGGTTAATTCTAATGATTATTTGGTTAGACATGTTGATTGATCAACATCTGTAATTTTCAGTGTTTGATTTGGTTATGTTATTGCTTCTTAGTGAAGCATTTACCGTTCCTCCAACCTATGGTCTCATTAGTTGAATTCAATTCCTGTGGGATAGGTAGAAATATATATGGTGATAAGTGGATGATAATTATGATTTTCAATGCTGGACCTATGAAAATTACAGTAAGTTTAAATATTATTCTGGTTATTGAACTTTCGGCTTTGATTTGTTTTGGTTCATAAACTTTCAACTTTTATTTAGTCTTTGTACTTTCGTATCCATTTCTACCAAAATTTTTGGATCCCATAAAAATGTAGCCACAAACTTTTATTACAGGGTTTTCATTGTGAGTGAAATTTGTGGGTTTTTTTAACATAGATTAAAATGTGATCACATGGAAAAGTACAGGATAAAAAATTCACGTTTTGTAATAAAAACTAAAATTAATTAAAGTTGAAAGTAGATGGAGCAAAAATAAATATTTAAAACTACATTTCTAATTTATGTTTTGCCGTCACAAAATGAGAAAAAGTGTCTTTGTCTACATAAGTTTTTGTTTCTACTTTTATTTTTAGAATGGAAGTTAGATATGTATATATCCATGTAGTTCTTTTGCTAATACAGCGTGTTTCCTACCTTTGTAGCAATTTTTTAGTATAATAGGTGGAAGATTTGAATCACAAAACTCTTAATTGTTAGCACGTAAGTTATGTTAATTGAGCTAAACTCGTTTTGACTTTTAAAAAGATGACATGTTTGGGGATCGTTAGGACAATAATAAATAAAGCAAATGTTTTGGATCTAGGTTTAATTTGTTTTTTTTTGTTTAAGTACTTTTACTGGACCTCACAATTCCACTTTGCATGGTTTCTTCACATTTTCTTTTTCACACCATTTAATAATTGATCATACATTGACATATATTGAATGCTCTTGCTGCTGGTTGGGAAATCCACTATGTAATTGAGTTATCATTTGATTCAACTTTTTTTTAAAGTTTATGTAATTACTGTTACTAACTGAATACTCACAAACAATATGTTTTATGTTTGCATGTCAATTTTATGCCACTTTTCAGCTTTCTTGGAAACCAAGGTACTTCTTTCTCATACATTTAATGGTAAAAATCACCATCTGCACCATGTGGCCTGATCAAATAATTTCATATGATGAATATATGTAAGTACTTTCTCACCCGCATCTCTGTCCTGTGATTAATAAGAGAAATTTGTTGATAATTAAATGTGGAAAAATGATAAATATATAATTCTAGATGTGGTAGTGCATTAAAAGAATTGAACTTAGGAAGCGTGGGACCTCACACATACTAAGTGAGAATCAAACCACCAGACCAAATGCCCATAAATGAAAAAATTCACTGAGCTCTAATACTCAATCACATTTTGTGTTTATCTTGTTGGTAGGATTATATGTCATGAAAGTTTATTGGGGATAGATTTACTGGTTCTTGTTTTGATATCTTTCCTGATATTGAATCAGGACTATGCTAGTTTAGCTTCTATATGAATATCCACACATACTTATATATTTTGGATGAATGATATATAAACATATATGATTTCCTAAAAGAACAATTTTGTAAAAGATTGTTCAAGGGGCATTCCGAGAATCAAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACTACTAGACCAAATGCCCTATTCATGACATAGTATGCAATAAGTTTTGATAGATCTCTTCATGATTGTTCTATAAATTATATTTTATGTATCAAACATTGAAAAATTGTTGATCATTTCTCTTTGACTCGGAGGATTCATCATTGAAGAAAGTGTGGCATTGATGAAACCTATGTCCCACTAGTATTAATCTTATACCTTTTAGATCTAGAAAGCTGCAAAAATTTGACCATTCTCAAATTAGTTATAAAGGAGTAGAGTAGAATCAACTGTGAAAGAGGAGAAAAAACTTGTTGGAGTGAGTTAATCCCTAATGCAAATTTTAGTTTGACAATTTTACTTGAAACCACACATTTTGAGCACACAAGTAAAAAACAAATGTAGAACGCTAAGCTTTGGTTATTTTGGTTTCTACATGAACTGATTCCAAAGAAAAAAAAAAGGACAATTTTGTAAAAGATTGTTTGACATTCAAAGGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTTGATGTACAAGTAATGTTTTATAGGTAATATTTTGGTTTCGTTTTGTTTTTTCTTTACATTGTGTTTTGGTAAGGTTTATTAATAATGAATAACTTTGACATTTAATGAAACCCATGTGCAAATATCAATAAATAATAACAGAGCTTCTTCTACTTTTTAGATCTAAACAGCCAGCCCCAAAATGTGATCATTATTCTCAACTTGTTTGTATAGGGACGTAGGTAACAACCTCTACCACAAGGATGATGAACAGGGAGCAAATGAAAGATCTGTTAAAAGCTATAAAAGCTATTACCCGATGTAAGTTGCACTTTGAGAACAAACGAAAAAACTTCTGTAAAACAAAAACAAGCAACTGAGTTTCAAATTATATATGGCCTAACGAACCAAAATATTTATAAAATATAGCAAATTCTTAACATTGATAGAAGTTTATCAATTTTCGTGTCTAATATTGATAAAATTTAAAATTTTATTATATTTTATAAATATTTACGGTAGTTTTGCCATTTATAATTATTTTCCTTTTAATAACTACTTTTAAGGTATTAATTTTGTTTTTAGTTTTTTTTAAAGTACCGTCTTTCTTTTTTTTTCTAAAATTCTATACTATGATTCTATAGTTATTTCAAAATACTTGAATTCTTGACTATTTTAATAGTTTATTTTTTTAAAAAAAAGAAAATCATGTTATCAAACCATGTCTAAAGCTTTAAAAACTATTTCATTTTTAGTTTTTGACATTAATATGTTTTCGCACCATTTATGTAGCATGATTTTCATCACAACTCTTCAAGAAACTCTTCAAGAAAGCTTTGAATTTGTTAACCAAATGAAAAGAGGAACATGTTTCGGAAGCTTTTAATAACCTACTTTTATTTTTGAAACTAGGTTAAAATTAAAAATCCAAATGCTATCTCAAACTTATTTTCACCTCGAACATGCATTTCTATTCATTACAATTTTATTTTTAAGCACTCAATGCCTGTATATATATGCATGTGTGTGTGCATAGAAGCTAAGGTTCCATACATTGATTTTCTTTTAAAATGGTAAACAAGGGGTTGTCACATATTATTCAAACTTCATTTGAGTTTATAATTAGTTTCTTTTCCATTTTGATGTCATGTAACTTATTATGTGTATTATGTTCCATTTTCAGGCCAGGTGAAAATTGGAAATGCTTGCTTCTGTTTCTCCCGGGAACTGAGGTCAAAAAAAGGTATGTATGAAGTACTTTTCCCATACTTGTTAATATATTAGCCAAAAGTAAGAATTACCAACCAAAACAATTATAGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCTTTTTGAATAAAAAATGTTCATTTAGTATTTTATCCATTCTACCAACAAAATCATTTACAAAATATAGATTATTTAGAAAATTAATAACATGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCAACTTGCCCTAAAATGTAGGGCTTTAACTAATAATCTTATGTCATACAGTCATAAATTTTAAAAGAATATGTTTGATAGGTCTTCAAAACTCTCCATTTTGTGCATAATAAATATTTGAACTCCAGAAAAGTGTAACAAGTCCCTTTGTCTAATAAGTTTATTAATTTTTTCCAAAAAAAACTATCAAGATATCTGACATAAAAATTTGAAAATTAAATGTTTATTAGACACACAATAAATAAATTATGTTTGATAAAAAATTCATTAAATTAATTTTTTTTGCATATGCTATTCTAAATAAAGCACAAACTTGAGTAAAATAACGAAAAGCTTTAAAACGTATTGAAAATAAGCACGATAAAGTTTAAAATGTCCTATCCTCTTACAAAATGCACGAATTCCTAAACTATAATAATATAATGAAAAAAATGAATTTAAAAAAATGTTGGGACATTCCGAATCAAGACCTCCTCGCAACCTAATCAAGAATCATACCACCAGACCAAATCTCCTTTTTTGTGCATAATTTAAAAAAACTAAATTTACTTAATATTTATCGAAACCTTTCTTTTTTTCAAAATAGAAAACAGTTGAAATTAAATTTTTAAAAGAAAATGTTGAGGGAAAATAGACTTTTGGTCCAATAAACTTATGCTATATATCTGTTTGGTTAACAAAATCTCTAAACATATGTTTTAGTTTTTTAAATTTGGAAAATAGTGTTTAATCCTAATTTAATTTGGCTATGCAGTCGACTAAAGAAAAAATAATTTGACTTTTTAAAGTGGCACACTTCATTTTTCTTTTAAATTTTTATTGTACAACCATTCGAGTTATACAAAGATGTAGATGCAGTCCAGACATCGTCTACATCACTTTTTTTCTTCTTTCTCTCCCTATATATATGAAAGGGATTTAAGGGAAGAATTTTTAAATACTTTACCTTTATTTTCTTTAATATATACATATTTTATTCTCAACCTTCATAATTGGTTATTAATAGTAGCTAACTAACATACATTGCAAATGTTCCTTCAAAAATATTACATAGGTATGATCTCAGAATTCTCATGAGTTCATCAAATAATAAAAGTAGGTTTTAGGCGCTATATTATCAAGGTTTTCAGTTGATCACTATATAGCTATTTTGAATCATTTATCTCTTTCAAGTATATATAAACAACATTTTAAAGAAAAAATTATTTCAGTTATTTTTTCTTAAATAAAGAAAAGTGATGAGAGAGAAGAGAAGACTGCGATGAAAAACTAATAAACTTTTTCAAAGCATTCATCAAAGAGCTAAGGTAGAGAATTTTTATGGTATTTGTTTTATAGATTATTATTATTATTATTTTTATACAATCTTCTAATTTAATCCCAAAGAAAAAAAAATTAAATTAGTTGCTATGAATTTGCTAATTATATCCATTGGCTTATCGTTAAACCAGCTAATTTGAACTAATCTCCACCACTTACTTTACAATTCACACCCCCACAATTTTCTCATACAATTGTTGTTATTTTCTCTCTTCATGTTTTTCATTATTTAATCACAGCTTTAAAGAAAAACACAAACCCACGACGCAAACAAACAAACAAACAAACAAAGAGAGCAGTGGCATTACCCAGAAAAGATAAAGAAGAAGGGAAGCCACTCTCTCCAGTCCGTTCCCCATCGTTGTTCGGTCGGTTTTAGAGCGTTTGGAGAGGCATATTATATAACAAAAAAAAGGATGGCTAGCTTTGCAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGGTAATGTAATATATGTGTGTGTGTTTCTGTATCGAAAACAATTTTACGAACATGCATTGGATGCTTGTTTGATGACAATGATTTCGATTTGAAAATAATTTCTAAAAGAAAGAGAAAAAGAAAAAGAAAATTTGAACAAATAGGTTAATTAATTGATTTGTATATACCTAATATGCTATATATGGTTTTGCAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGCAATTTTTCTTTTTCCTTTTTCTTTTTAATTTCAAATCACACCCTCTATATAATTTTCCTATCTTTGCAGAATTAGAACATTTGAAATTTATTTTAAACTTTATATATACATATACTGTAAGTTTTTCCAAAAATGATAGGGTATAATATAATTCTAAAATCGAATATTTTTCTTTTCATCAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGGTAATATTCTTTTTATCAATTAATTATACTTTTATATTTATATATATATTGAAAAACAATGTCGAGAAACCAAATTATAATCAAACAAGATTTGATTTTGGATTGAACTTTGGACATGAACAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAATACTTTACAATAAAAAGAAATATAGTTTATCAAACAAAAATTACTGATTAGTTATTTATTATTACTATCATATAGAGTGTTTGTTACTTTGATACATAAAAAAATTCAATTTCAACGATCATTTAAAATATACACTATATCGTCCAAAAAAAGTTGAAGATGTTGTGTTTGTGGGTATAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAGCAATATATGATATTATATCAATCTCTCACATCTTTTAATTCTTCACACCTTCAAAAAAATCAAATATTGTTGAATATTGTTTGTTGCAAAATTTGTGTTGTTTGTTTTCTCCATTTCTTTAAAAGTGGATTATTATTATTATTATTATCATTCTCTGTGGAAGGTCAGTTTGTTG

mRNA sequence

GAGTGTCTCTCCTTTGTTTGGCTGCCGAGAAAATCAGGGAAAACATTTCTTCTTCTTCTTTCTATCGATCGAAGTTAATCAGTTCATTTCGAACTGCTTAAATCGCTACTGCAATGGCGAAAGCTCATTCGGCGTGTATCACTCAAGTACGTATGGAACTGCTAATCGATGGTGGAAGATGATACGAGGTGTATTTAGAGTGATGGAACATTTGAGTACTTGTACAATTTTGTGTATGACCAAGGAAAGGAGAAAAAGCCGCTGAAGTTATTCCATAATAGAAGTTGTTTGAGAATTTCACCAAACCACACTTCCCGAGTACAACAATGTGAAACTAAGATGCTGGTTCTGCTGCTTATAAGATGCATCATGTTCCTCAGAGAAAGGGAAAAAAAAAAAAGAAAAGAATTTTCACAAACTAAGATCCTTGCTGGCATGTGCGTGGACCGGTTGCTTCTACCTCAGAGAACTAATGATGGAAGCCCTGGTGAACATTTGGTACGGTTGCTTCTCTCTCTCTCTCAGAGAAACCGAGTTAAGCTTTCTTGGAAACCAAGGTACTTCTTTCTCATACATTTAATGGTAAAAATCACCATCTGCACCATGTGGCCTGATCAAATAATTTCATATGATGAATATATGTAAGTACTTTCTCACCCGCATCTCTGTCCTGTGATTAATAAGAGAAATTTGTTGATAATTAAATGTGGAAAAATGATAAATATATAATTCTAGATGTGGTAGTGCATTAAAAGAATTGAACTTAGGAAGCGTGGGACCTCACACATACTAAGTGAGAATCAAACCACCAGACCAAATGCCCATAAATGAAAAAATTCACTGAGCTCTAATACTCAATCACATTTTGTGTTTATCTTGTTGGTAGGATTATATGTCATGAAAGTTTATTGGGGATAGATTTACTGGTTCTTGTTTTGATATCTTTCCTGATATTGAATCAGGACTATGCTAGTTTAGCTTCTATATGAATATCCACACATACTTATATATTTTGGATGAATGATATATAAACATATATGATTTCCTAAAAGAACAATTTTGTAAAAGATTGTTCAAGGGGCATTCCGAGAATCAAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACTACTAGACCAAATGCCCTATTCATGACATAGTATGCAATAAGTTTTGATAGATCTCTTCATGATTGTTCTATAAATTATATTTTATGTATCAAACATTGAAAAATTGTTGATCATTTCTCTTTGACTCGGAGGATTCATCATTGAAGAAAGTGTGGCATTGATGAAACCTATGTCCCACTAGTATTAATCTTATACCTTTTAGATCTAGAAAGCTGCAAAAATTTGACCATTCTCAAATTAGTTATAAAGGAGTAGAGTAGAATCAACTGTGAAAGAGGAGAAAAAACTTGTTGGAAAAAAAAAAAGGACAATTTTGTAAAAGATTGTTTGACATTCAAAGGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTTGATGTACAAGTAATGTTTTATAGGGACGTAGGTAACAACCTCTACCACAAGGATGATGAACAGGGAGCAAATGAAAGATCTGTTAAAAGCTATAAAAGCTATTACCCGATGCCAGGTGAAAATTGGAAATGCTTGCTTCTGTTTCTCCCGGGAACTGAGGTCAAAAAAAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAGCAATATATGATATTATATCAATCTCTCACATCTTTTAATTCTTCACACCTTCAAAAAAATCAAATATTGTTGAATATTGTTTGTTGCAAAATTTGTGTTGTTTGTTTTCTCCATTTCTTTAAAAGTGGATTATTATTATTATTATTATCATTCTCTGTGGAAGGTCAGTTTGTTG

Coding sequence (CDS)

ATGATGAACAGGGAGCAAATGAAAGATCTGTTAAAAGCTATAAAAGCTATTACCCGATGCCAGGTGAAAATTGGAAATGCTTGCTTCTGTTTCTCCCGGGAACTGAGGTCAAAAAAAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAGGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Protein sequence

MMNREQMKDLLKAIKAITRCQVKIGNACFCFSRELRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAVAAAIKLTTPMEIAAES

Homology

[Close]

BLAST of Cmc01g0004171 vs. NCBI nr
Match: KAA0031371.1 (LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain protein GLIM1a [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 2.2e-112
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           NNSAVAAAIKLTTPMEIAAES
Sbjct: 181 NNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. NCBI nr
Match: XP_004136935.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical protein Csa_017260 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 6.1e-107
Identity = 187/201 (93.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK+M+ EKPSENENAKSVSNMFGGTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNG AYHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           NNSA+AAAIKLTTPMEIAAES
Sbjct: 181 NNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. NCBI nr
Match: XP_038888760.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 181/201 (90.05%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMAC+KTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK++K +KP+ENENAKSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVVKLDKPTENENAKSVSNMFAGTRDKCSGCTKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           NN+A + A+ LT+PMEIAAES
Sbjct: 181 NNNA-SVAMTLTSPMEIAAES 200

[Close]

BLAST of Cmc01g0004171 vs. NCBI nr
Match: XP_023553857.1 (LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.9 bits (977), Expect = 7.7e-102
Identity = 176/201 (87.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
            NS     +    PMEIAAES
Sbjct: 181 ENSVPIDTLNANNPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. NCBI nr
Match: KAG6571916.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.9 bits (977), Expect = 7.7e-102
Identity = 176/201 (87.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 111 MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 170

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 171 PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 230

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 231 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 290

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
            NS     +    PMEIAAES
Sbjct: 291 ENSVPINTLNANNPMEIAAES 311

[Close]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-84
Identity = 147/186 (79.03%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GTTQKCMAC+KTVYLVDKLTADNRV+HK CFRC+HC+GTLKLSNY SFEGVLYCRPH+DQ
Sbjct: 5   GTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENEN--AKSVSNMFGGTRDKCSGCTKTVYPIEKVT 159
            FKRTGSL+KSFEGTPK+ KP++P E E      VSNMFGGTR+KC GC KTVYPIEKV+
Sbjct: 65  NFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKVS 124

Query: 160 VNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLE--TERQKN 219
           VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKGN SQLE   E    
Sbjct: 125 VNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAK 184

Query: 220 NSAVAA 222
           +  VAA
Sbjct: 185 DKVVAA 190

[Close]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-75
Identity = 128/179 (71.51%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           ++S  GTTQKC  CEKTVYLVDKL A+ RV+HK CFRC+HC  TLKLSN+ SF+GV+YCR
Sbjct: 1   MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEK--PSENENAKSVSNMFGGTRDKCSGCTKTVYP 154
            H+DQLFKRTGSL+KSF+GTPK  KPE+    E ++A  +S+ F GTRDKC+ C K VYP
Sbjct: 61  HHFDQLFKRTGSLEKSFDGTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 120

Query: 155 IEKVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETE 212
           IE+V V+GTAYH++CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLFK+KGNYSQLE E
Sbjct: 121 IERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVE 178

[Close]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-59
Identity = 108/183 (59.02%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LSNY S EGV+YCRPH++Q
Sbjct: 5   GTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPK-LMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTV 159
           LFK +GS  K+F+   K L     P  N     ++ MF GT+DKC+ CTKTVYPIEKVTV
Sbjct: 65  LFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTV 124

Query: 160 NGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSA 219
               YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        + 
Sbjct: 125 ESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRAT 184

Query: 220 VAA 222
            AA
Sbjct: 185 AAA 187

[Close]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-58
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH++Q
Sbjct: 5   GTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVN 159
           LFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKVTV 
Sbjct: 65  LFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVE 124

Query: 160 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAV 219
              YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        SA 
Sbjct: 125 SQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSA- 184

Query: 220 AAAIKLTTPMEIAAES 236
           AAA+    P     ES
Sbjct: 185 AAAVAAGVPAASVPES 199

[Close]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.4e-51
Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT  KC AC+KTVY++D LT +   +HK CFRC HC+GTL +SNY S +GVLYC+PH++Q
Sbjct: 5   GTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSEN--ENAKSVSNMFGGTRDKCSGCTKTVYPIEKVT 159
           LFK +G+  K+F+      K EKP+++       +S+ F GT+DKC+ C KTVYP+EKVT
Sbjct: 65  LFKESGNYSKNFQAG----KTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 124

Query: 160 VNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQL 209
           + G +YHK+CF+C+H GC ++ S+Y +  G LYCK H  QLF EKG+Y+ +
Sbjct: 125 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL
Match: A0A5A7SP97 (LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001270 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.0e-112
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           NNSAVAAAIKLTTPMEIAAES
Sbjct: 181 NNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL
Match: A0A0A0K2E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.9e-107
Identity = 187/201 (93.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK+M+ EKPSENENAKSVSNMFGGTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNG AYHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           NNSA+AAAIKLTTPMEIAAES
Sbjct: 181 NNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL
Match: A0A6J1GLG2 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111455348 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.7e-102
Identity = 176/201 (87.56%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
            NS     +    PMEIAAES
Sbjct: 181 ENSVPINTLNANNPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL
Match: A0A6J1I4V6 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111471016 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 174/196 (88.78%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GTTQ+CMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCRPHYDQ
Sbjct: 6   GTTQRCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCRPHYDQ 65

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVN 159
           LFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIEKVTVN
Sbjct: 66  LFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIEKVTVN 125

Query: 160 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAV 219
           GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK NS  
Sbjct: 126 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKENSVP 185

Query: 220 AAAIKLTTPMEIAAES 236
              +    PMEIAAES
Sbjct: 186 INTLDANNPMEIAAES 201

[Close]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL
Match: A0A6J1D4V0 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111017319 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 177/201 (88.06%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 35  LRSKKGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 94
           + S  GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 95  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 154
           PHYDQLFKRTGSLDKSFEGTPK +KPEKP+E ENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPK-VKPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 155 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 214
           KVTVNGTAYHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 215 NNSAVAAAIKLTTPMEIAAES 236
           N    + ++ LT+P+EIAAES
Sbjct: 181 N----SVSMNLTSPVEIAAES 196

[Close]

BLAST of Cmc01g0004171 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-85
Identity = 147/186 (79.03%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GTTQKCMAC+KTVYLVDKLTADNRV+HK CFRC+HC+GTLKLSNY SFEGVLYCRPH+DQ
Sbjct: 5   GTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENEN--AKSVSNMFGGTRDKCSGCTKTVYPIEKVT 159
            FKRTGSL+KSFEGTPK+ KP++P E E      VSNMFGGTR+KC GC KTVYPIEKV+
Sbjct: 65  NFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKVS 124

Query: 160 VNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLE--TERQKN 219
           VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKGN SQLE   E    
Sbjct: 125 VNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGENAAK 184

Query: 220 NSAVAA 222
           +  VAA
Sbjct: 185 DKVVAA 190

[Close]

BLAST of Cmc01g0004171 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60
Identity = 108/183 (59.02%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LSNY S EGV+YCRPH++Q
Sbjct: 5   GTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPK-LMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTV 159
           LFK +GS  K+F+   K L     P  N     ++ MF GT+DKC+ CTKTVYPIEKVTV
Sbjct: 65  LFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTV 124

Query: 160 NGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSA 219
               YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        + 
Sbjct: 125 ESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRAT 184

Query: 220 VAA 222
            AA
Sbjct: 185 AAA 187

[Close]

BLAST of Cmc01g0004171 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH++Q
Sbjct: 5   GTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVN 159
           LFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKVTV 
Sbjct: 65  LFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVE 124

Query: 160 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAV 219
              YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        SA 
Sbjct: 125 SQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSA- 184

Query: 220 AAAIKLTTPMEIAAES 236
           AAA+    P     ES
Sbjct: 185 AAAVAAGVPAASVPES 199

[Close]

BLAST of Cmc01g0004171 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH++Q
Sbjct: 5   GTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVN 159
           LFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKVTV 
Sbjct: 65  LFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVE 124

Query: 160 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAV 219
              YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        SA 
Sbjct: 125 SQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSA- 184

Query: 220 AAAIKLTTPMEIAAES 236
           AAA+    P     ES
Sbjct: 185 AAAVAAGVPAASVPES 199

[Close]

BLAST of Cmc01g0004171 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 40  GTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQ 99
           GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH++Q
Sbjct: 5   GTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQ 64

Query: 100 LFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVN 159
           LFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKVTV 
Sbjct: 65  LFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVE 124

Query: 160 GTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAV 219
              YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        SA 
Sbjct: 125 SQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSA- 184

Query: 220 AAAIKLTTPMEIAAES 236
           AAA+    P     ES
Sbjct: 185 AAAVAAGVPAASVPES 199

The following BLAST results are available for this feature:

BLAST of Cmc01g0004171 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031371.1	2.2e-112	98.01	LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain prot...	[more]
XP_004136935.1	6.1e-107	93.03	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical p...	[more]
XP_038888760.1	3.1e-103	90.05	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
XP_023553857.1	7.7e-102	87.56	LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571916.1	7.7e-102	87.56	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Cmc01g0004171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	2.6e-84	79.03	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	4.9e-75	71.51	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	2.2e-59	59.02	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	2.4e-58	55.61	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	6.4e-51	51.46	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Cmc01g0004171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP97	1.0e-112	98.01	LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0K2E5	2.9e-107	93.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1	[more]
A0A6J1GLG2	3.7e-102	87.56	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I4V6	1.4e-101	88.78	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1D4V0	2.0e-100	88.06	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Cmc01g0004171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	1.8e-85	79.03	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	1.6e-60	59.02	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.7e-59	55.61	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.7e-59	55.61	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.7e-59	55.61	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 44..96 e-value: 2.7E-9 score: 46.9 coord: 142..194 e-value: 4.5E-15 score: 66.1
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 45..99 e-value: 3.8E-9 score: 36.6 coord: 143..198 e-value: 1.2E-12 score: 47.9
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 45..79
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 43..103 score: 12.9889
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 141..201 score: 12.8503
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 138..207 e-value: 6.9E-20 score: 73.0 coord: 39..109 e-value: 4.2E-18 score: 67.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 39..220
None	No IPR available	PANTHER	PTHR24206:SF35	LIM DOMAIN-CONTAINING PROTEIN WLIM1	coord: 39..220
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 41..103 e-value: 2.87689E-36 score: 120.647
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 143..203 e-value: 2.10642E-39 score: 128.742
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 38..70
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 71..111
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 135..168
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 169..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0004171.1	Cmc01g0004171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding