Cmc01g0003981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0003981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-type domain-containing protein
Location	CMiso1.1chr01: 760522 .. 763207 (-)
RNA-Seq Expression	Cmc01g0003981
Synteny	Cmc01g0003981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACAATCACATCTTAGTTCTAAGCTCTAAAATTATTACAAAGTAAATAAATGAAAGATCAAAGGGATAAAGATAAGAACTAATTCATCTATTGAGTTCTTCGATTCCAATTCCAATCCAATCCACGTTCGACTTATTATTACTTCAATCTGTCCTCTACCGCAAGTAACCAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTACGAAATTTCGACTCCATTTCCTCCCAGTTTCAAACCCTTTCCGTTTTTCATTCATTCAAATTCAGATTCTACGCTAAATTTTGAGTGAAAACAAGCATAGAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTACAGATTTGGTCGTACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGAATCTTCAGTATCAACGCCGTCATCATGGTCACAATGCCAATCACCGCCGCGATTTGAACTCCTGTGGCGATTTCCGCCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCCCGGTTTTTTAACCCTGTAAGAAGGATTAAACAAAATTTGCTAGATTCTGGGCTTATGTTACTTGACAATTTTTTTTTTTTTTTTTTACTTCGATGAAGTATATATTAACCGGTTGAGAATAGTTGGAATTGGGAGAACTGTTCATAATTGGTTTCGATTGGGAAATTTTAAGCGTTTCCGACTTAAAATTTCCTCTAAACTGTAGAATCTGTTGGGAATATGTTGAAAATATCAGATTTGCCCTAATTTATCAGCTTAGGTTGTTGGTATGGTTTTATTTGGTTCATGTCCTAAGAATAATGTCATTTGTACTTAGCTATGGATTGATCCAACAAACGACTCTATTGATAACCATTTAGTTTTTTGGCTTTGAAAATTAAGCTTGTTAAAGTTGCTTCCAAGTTCCAACTATGGATTTCTTTGTTTTGTTTATGTTTTCAAAATCCAGGCTTAAAGGAATAGGTTTTAGAAGCTTGTTTTTTTTTTTAAAAAAAAATTGGCTATAGATTCAAATGGTTATCAAATTGATCTCTAGTCAAGCTATTGATTTGATTATTGTTATTCTTCAGTGATAATTCTGTTTTCCATTGCTGTGAAATAATTAGAACCAGAATAAATCAAATTGCAGAAGTTGGTACTGAGAGTGACGATGGATATAACTTTTCAAGTTTTATTAGCTTCTAAATGCTACTTTGCTATTAAACCATGATTTAATTGGTATGTGTTCATGGAGACGTAATTTGGTTAATTAAGAATGCTTTTCTTTATTATTGTTGTTGTTTTTTTTCTGGGTTGTCATCTCTGTCTGAATGTTATCTTCAATTAGTTTGGAGGCATTAACACTATGTTTTCGTTGTAGCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGGTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCTCCAACGAGCAGGTCAGTTCCTATTGTCATGTCTTTGTTTTTCACATCACTATTCAGAAAACTTTTGTGACTTCAATTAGAATGTTCCATGCTATCTCTCTAGTTTTAAGGGCATGTTTGGAAGCAATCTTAAAATTGTTAGAAACACTTTTCTCAGGATCATAATCACTCTGAGACATGTCATCTTTAGTCATTCAAAGTTTCAAAAATCAATTTAATGCTTGATTTCACACGTTTAAACTTGATTTTTATATAATCAAAGTTGATTTTGAATACTTAAAAGAATGCTCGTAAACATATGCTGTGGTATGAATCAATTTGTATGGTTTTCTTTTGTTGATAGGGATTTGGTTTGTATTGTATACTCAGGAAATAGGATCCAATTCTAATAAACTTGTAAAGTTTCAACAAGTTCTGTCCTATACTTTTAAAGATAAATTGTTACTGGGTCACCATCTGAATGTTGAAAGCTAGAATAGATCCCAGCGCTGTAGTGTATTGCTAACCGAATTAGTTTATTCATCAGGAACGCACTTGTCGAAGCATCAAATGGAAATCCAGAAATCTCAACAAGTCGATCGCAGAGGATATCCCTCATCGATGCTGACAGGATGCGATTAGTAGCTGTACCTAGCAAGAGGCCTCCTGGTCTTTCCCAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCGTATCATCGATGACGATGTGATGACAATAACCTCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGATAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTAGAACTTGTGGAGAATGCCCATATTGTCGACAACATATCTCACCATCAACCAATATTTTCTAACACGCTTCGCAACTTCGGATTTCATGTCTGTGTAGAAAACTTAGAGACTTTATTATTCGAAGTTGTGGTATTAATCTTTTATACTTCTGTAGTTGATGATGTTCATACTTGTATCCTTTTAAGGTCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGTTTGACTGCTTCCACAACTCTCTCTTCTTTTTC

mRNA sequence

GGACAATCACATCTTAGTTCTAAGCTCTAAAATTATTACAAAGTAAATAAATGAAAGATCAAAGGGATAAAGATAAGAACTAATTCATCTATTGAGTTCTTCGATTCCAATTCCAATCCAATCCACGTTCGACTTATTATTACTTCAATCTGTCCTCTACCGCAAGTAACCAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTACGAAATTTCGACTCCATTTCCTCCCAGTTTCAAACCCTTTCCGTTTTTCATTCATTCAAATTCAGATTCTACGCTAAATTTTGAGTGAAAACAAGCATAGAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTACAGATTTGGTCGTACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGAATCTTCAGTATCAACGCCGTCATCATGGTCACAATGCCAATCACCGCCGCGATTTGAACTCCTGTGGCGATTTCCGCCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCCCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGGTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCTCCAACGAGCAGGAACGCACTTGTCGAAGCATCAAATGGAAATCCAGAAATCTCAACAAGTCGATCGCAGAGGATATCCCTCATCGATGCTGACAGGATGCGATTAGTAGCTGTACCTAGCAAGAGGCCTCCTGGTCTTTCCCAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCGTATCATCGATGACGATGTGATGACAATAACCTCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGATAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTAGAACTTGTGGAGAATGCCCATATTGTCGACAACATATCTCACCATCAACCAATATTTTCTAACACGCTTCGCAACTTCGGATTTCATGTCTGTGTAGAAAACTTAGAGACTTTATTATTCGAAGTTGTGGTATTAATCTTTTATACTTCTGTAGTTGATGATGTTCATACTTGTATCCTTTTAAGGTCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGTTTGACTGCTTCCACAACTCTCTCTTCTTTTTC

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTACAGATTTGGTCGTACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGAATCTTCAGTATCAACGCCGTCATCATGGTCACAATGCCAATCACCGCCGCGATTTGAACTCCTGTGGCGATTTCCGCCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCCCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGGTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCTCCAACGAGCAGGAACGCACTTGTCGAAGCATCAAATGGAAATCCAGAAATCTCAACAAGTCGATCGCAGAGGATATCCCTCATCGATGCTGACAGGATGCGATTAGTAGCTGTACCTAGCAAGAGGCCTCCTGGTCTTTCCCAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCGTATCATCGATGACGATGTGATGACAATAACCTCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGATAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTAGAACTTGTGGAGAATGCCCATATTGTCGACAACATATCTCACCATCAACCAATATTTTCTAA

Protein sequence

MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSSLQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLARERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHISPSTNIF

Homology

[Close]

BLAST of Cmc01g0003981 vs. NCBI nr
Match: XP_008455026.1 (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa] >TYK06808.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa])

HSP 1 Score: 524.6 bits (1350), Expect = 4.8e-145
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240
           QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHISPSTNIF 263
           WIRTCGECPYCRQHISPSTNIF
Sbjct: 241 WIRTCGECPYCRQHISPSTNIF 262

[Close]

BLAST of Cmc01g0003981 vs. NCBI nr
Match: XP_004136947.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothetical protein Csa_017364 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240
           QDAINRLQLEVFINTD II+D VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIS 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIA 256

[Close]

BLAST of Cmc01g0003981 vs. NCBI nr
Match: XP_038888994.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 447.2 bits (1149), Expect = 9.7e-122
Identity = 225/256 (87.89%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFY RRYR GRTD+DLGLDSEPPDR LQYQRRHHGHNANHRRD NSCG FRRSS
Sbjct: 1   MTSASELFYSRRYRLGRTDADLGLDSEPPDRYLQYQRRHHGHNANHRRDFNSCGTFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDR P QSDS TS GSRNNIN NTQNSLR+GLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRLPTQSDSVTSDGSRNNINPNTQNSLRTGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSP SRNALVEA +G+PEIST+RSQRISL+DADRM+LV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPRSRNALVEALDGSPEISTNRSQRISLVDADRMQLVPAPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           QDAI+RLQLEVFINT+ IIDDDV  T TS +CSICLESFTDGD LIHLPCEHKFHHACLD
Sbjct: 181 QDAIDRLQLEVFINTEHIIDDDVTTTTTSNECSICLESFTDGDVLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHI 256
           RWIRTCGECPYCRQH+
Sbjct: 241 RWIRTCGECPYCRQHV 256

[Close]

BLAST of Cmc01g0003981 vs. NCBI nr
Match: XP_022988901.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 2.5e-109
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN NHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SVGSRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PEIS SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
            +AIN LQLE FI+ + IIDDD+ MT TS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHI 256
            WIRTCGECPYCRQHI
Sbjct: 241 PWIRTCGECPYCRQHI 256

[Close]

BLAST of Cmc01g0003981 vs. NCBI nr
Match: XP_023529438.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.0 bits (1042), Expect = 2.5e-109
Identity = 207/256 (80.86%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN NHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQS+S  SVGSRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PEIS SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTI-TSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
           Q+AIN LQLE FI+ + IIDDD+  I TS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 QEAINCLQLERFIDIEHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHI 256
           +WIRTCGECPYCRQ I
Sbjct: 241 QWIRTCGECPYCRQRI 256

[Close]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot
Match: Q852U6 (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.5e-36
Identity = 105/265 (39.62%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHG-HNANHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     +  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VGSRNNINGNTQNSLRSGLSGDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGAS-SPTSRNALVEASNGNPEISTSRSQRISLIDAD------RMRLVAV 180
           LAR+RL ERLRG S S  SR+  V        +   R      ID D       +++   
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRV-------SLDDQRESSFHSIDGDPIFQLAGLQVTYE 180

Query: 181 PSKRPPGLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEH 240
            +K+P GL+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H
Sbjct: 181 CNKKPQGLTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTH 240

Query: 241 KFHHACLDRWIRTCGECPYCRQHIS 257
            FH +CL+ W+R CG+CP CR+ I+
Sbjct: 241 SFHSSCLNPWLRACGDCPCCRRAIA 248

[Close]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 176 PPGLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLP-CEHKFH 235
           P GL +  IN++ +  +   D  +        +TDCS+CL  F+DG+ L  LP C H FH
Sbjct: 129 PSGLDETLINKITVCKYRRGDGFVH-------TTDCSVCLGEFSDGESLRLLPRCSHAFH 188

Query: 236 HACLDRWIRTCGECPYCRQHIS 257
             C+D W+++   CP CR +I+
Sbjct: 189 QQCIDTWLKSHSNCPLCRANIT 203

[Close]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot
Match: Q641J8 (E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 175 RPPGLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFH 234
           +P GL+++ I+ L    F   D +            CS+C+  +T+G+KL  LPC H++H
Sbjct: 542 QPRGLTKEQIDNLSTRNFGENDAL----------KTCSVCITEYTEGNKLRKLPCSHEYH 601

Query: 235 HACLDRWIRTCGECPYCRQHISPSTN 261
             C+DRW+     CP CR+ +  ++N
Sbjct: 602 IHCIDRWLSENSTCPICRRAVLVASN 617

[Close]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot
Match: Q9NVW2 (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 50/182 (27.47%), Postives = 80/182 (43.96%), Query Frame = 0


Query: 79  SPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLARERLLERLRGASSPTSRN 138
           S + S S++S  S ++ + ++ +S  S   G+S    S L           G+SS  S  
Sbjct: 453 SSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSN-----EGSSSSGSSG 512

Query: 139 ALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLSQDAINRLQLEVFINTDRI 198
           A  E  +  P           L  A    L      +P GL+++ I+ L +  F   D +
Sbjct: 513 ARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDAL 572

Query: 199 IDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHISPS 258
                       CS+C+  +T+G+KL  LPC H++H  C+DRW+     CP CR+ +  S
Sbjct: 573 ----------KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 619

Query: 259 TN 261
            N
Sbjct: 633 GN 619

[Close]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot
Match: Q9WTV7 (E3 ubiquitin-protein ligase RLIM OS=Mus musculus OX=10090 GN=Rlim PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 51/191 (26.70%), Postives = 83/191 (43.46%), Query Frame = 0


Query: 79  SPAQSDSATSVGSRN-------NINGNTQNSLRSGLSGDSR-LPGSVLLARERLLERLRG 138
           S + S+ + SV SRN       N  G++     SG S  S   P S   + E   E   G
Sbjct: 415 SDSDSEPSASVSSRNVERVESRNGRGSSGGGNSSGSSSSSSPSPSSSGESSESSSEMFEG 474

Query: 139 ASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSK-RPPGLSQDAINRLQL 198
           +S   S             ++   S  +  +   +  L+    + +P GL+++ I+ L +
Sbjct: 475 SSEGGSSGPSRRDGRHRAPVTFDESGSLPFLSLAQFFLLNEDDEDQPRGLTKEQIDNLAM 534

Query: 199 EVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECP 258
             F   D +            CS+C+  +T+G+KL  LPC H++H  C+DRW+     CP
Sbjct: 535 RSFGENDAL----------KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCP 594

Query: 259 YCRQHISPSTN 261
            CR+ +  S N
Sbjct: 595 ICRRAVLSSGN 595

[Close]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL
Match: A0A5A7SMR0 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001110 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.3e-145
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240
           QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHISPSTNIF 263
           WIRTCGECPYCRQHISPSTNIF
Sbjct: 241 WIRTCGECPYCRQHISPSTNIF 262

[Close]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL
Match: A0A1S3C156 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.3e-145
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240
           QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHISPSTNIF 263
           WIRTCGECPYCRQHISPSTNIF
Sbjct: 241 WIRTCGECPYCRQHISPSTNIF 262

[Close]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL
Match: A0A0A0K6D2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240
           QDAINRLQLEVFINTD II+D VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIS 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIA 256

[Close]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL
Match: A0A6J1JIJ3 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111486117 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.2e-109
Identity = 207/256 (80.86%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN NHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SVGSRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PEIS SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDRIIDDDV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240
            +AIN LQLE FI+ + IIDDD+ MT TS DCSICL+SF DGDKLIHLPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHI 256
            WIRTCGECPYCRQHI
Sbjct: 241 PWIRTCGECPYCRQHI 256

[Close]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL
Match: A0A6J1D583 (probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC111017418 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 201/257 (78.21%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR+GRTD+DLGLDSEPPDR+L   RRHHGH   HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGN--TQNSLRSGLSGDSRLPGSVL 120
           LQER QSPRF  PL+ DRS AQSDS TS+GSRN+IN N   +NS R+GLS DSRLPG+VL
Sbjct: 61  LQERHQSPRFSYPLAQDRSAAQSDSVTSLGSRNSINANIHIRNSSRTGLSXDSRLPGAVL 120

Query: 121 LARERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPG 180
           LARERLLERLRGAS PTSRN L EAS+GNPEISTS+SQRISL+DADR++LV   +KRPPG
Sbjct: 121 LARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPG 180

Query: 181 LSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACL 240
           LS +A++RLQLEVF+NT+ IIDDD  TITSTDCSICLESFTDGDKLIHLPCEHKFHHACL
Sbjct: 181 LSXEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHI 256
           DRW+R+CG+CPYCRQ I
Sbjct: 241 DRWVRSCGDCPYCRQRI 257

[Close]

BLAST of Cmc01g0003981 vs. TAIR 10
Match: AT1G49850.1 (RING/U-box superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-37
Identity = 105/265 (39.62%), Postives = 142/265 (53.58%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHG-HNANHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     +  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VGSRNNINGNTQNSLRSGLSGDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGAS-SPTSRNALVEASNGNPEISTSRSQRISLIDAD------RMRLVAV 180
           LAR+RL ERLRG S S  SR+  V        +   R      ID D       +++   
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRV-------SLDDQRESSFHSIDGDPIFQLAGLQVTYE 180

Query: 181 PSKRPPGLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEH 240
            +K+P GL+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H
Sbjct: 181 CNKKPQGLTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTH 240

Query: 241 KFHHACLDRWIRTCGECPYCRQHIS 257
            FH +CL+ W+R CG+CP CR+ I+
Sbjct: 241 SFHSSCLNPWLRACGDCPCCRRAIA 248

[Close]

BLAST of Cmc01g0003981 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-11
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHI 256
           DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of Cmc01g0003981 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHISPSTNI 262
           +C ICL ++ DG +L  LPC H FH +C+D+W+     CP C+ +I  S+N+
Sbjct: 352 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 403

[Close]

BLAST of Cmc01g0003981 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHACLDRWIRTCGECPYCRQHISPSTNI 262
           +C ICL ++ DG +L  LPC H FH +C+D+W+     CP C+ +I  S+N+
Sbjct: 281 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 332

[Close]

BLAST of Cmc01g0003981 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 178 GLSQDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLP-CEHKFHHA 237
           GL Q AI+ L + ++ N    ++         DC++CL  F+D DKL  LP C H FH  
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPF------DCAVCLNEFSDTDKLRLLPVCSHAFHLH 239

Query: 238 CLDRWIRTCGECPYCRQHISPS 259
           C+D W+ +   CP CR+ +S S
Sbjct: 240 CIDTWLLSNSTCPLCRRSLSTS 255

The following BLAST results are available for this feature:

BLAST of Cmc01g0003981 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455026.1	4.8e-145	100.00	PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiq...	[more]
XP_004136947.1	4.5e-135	95.31	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothe...	[more]
XP_038888994.1	9.7e-122	87.89	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_022988901.1	2.5e-109	80.86	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima]	[more]
XP_023529438.1	2.5e-109	80.86	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc01g0003981 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852U6	8.5e-36	39.62	Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q7XLY8	6.1e-10	36.59	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q641J8	6.1e-10	32.56	E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV...	[more]
Q9NVW2	6.1e-10	27.47	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3	[more]
Q9WTV7	1.0e-09	26.70	E3 ubiquitin-protein ligase RLIM OS=Mus musculus OX=10090 GN=Rlim PE=1 SV=2	[more]

BLAST of Cmc01g0003981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMR0	2.3e-145	100.00	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C156	2.3e-145	100.00	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV...	[more]
A0A0A0K6D2	2.2e-135	95.31	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 P...	[more]
A0A6J1JIJ3	1.2e-109	80.86	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1D583	1.1e-107	78.21	probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Cmc01g0003981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49850.1	6.0e-37	39.62	RING/U-box superfamily protein	[more]
AT2G15580.1	5.7e-11	56.52	RING/U-box superfamily protein	[more]
AT1G12760.1	1.4e-09	42.31	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.2	1.4e-09	42.31	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G48030.1	1.8e-09	37.80	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 207..260 e-value: 0.0099 score: -1.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..37
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 1..140
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 152..255
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 152..255
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 1..140
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 210..252 e-value: 1.32802E-16 score: 69.6381
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 198..259
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 211..251 e-value: 1.3E-5 score: 34.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 210..252 e-value: 2.1E-13 score: 50.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 211..252 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 169..258 e-value: 1.3E-19 score: 71.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0003981.1	Cmc01g0003981.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity