Cmc01g0003701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0003701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Heat-shock protein
Location	CMiso1.1chr01: 591391 .. 592427 (+)
RNA-Seq Expression	Cmc01g0003701
Synteny	Cmc01g0003701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGCGGTGGTTTAGTCTAGAGAGATCTACATTTGCGTGGAATCAAGACTATATCCCCGAAGTATTGGCCTTTCACCGTTATTCTACTATATAAAGCCTTTTTGTATCCCCCAACGGATTCAAGAATAAAGTTGAAGTTGTGCTGTGTTGTTTGTGTGAAGTTTCAATCAAGAACTATGGCGATGATGGGGTTACCCAGAAATTCATTGTTCCTAATTCTTGGACTTGCATTCTACTTTCTCGCCGCTCAACAAGTTAATGCTTTGATGCCTTATCGCTCCATATGGGATATCATGCAGCCGGGTATGTCAACTTTCTTTTCATTATAATTGGGTTTTGTTTATATCAGAAAATCATATCACAATGCTGTGTAAAGAAAAAACACAATTTTTAGATCCTGCAACATAATCTTTTTTCCTTATTAATTGGGTTTTGTTATCGGACCTAAATGAACAGGTGGCTACTCGGAGGACCCGTTTCGGATCCTGGAACAGAGTCCACTGAGCGTACCGAAATCGGCGGTGGACACTCTAGCAGTGGCTCGTGCAGACTGGAAAGAAACAGAGAAGGAGCACGTGATATGGATGGACATTCCGGGAGTGAAGAGGGAGGACTTAAAGATCGAAGTAGAGGAGAATCGAGTGTTGAGGATAAGTGGAGAGATGAAGGGGGAAGCTGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGATGAGTTCATCAGGCAGGTTTTGGAGGCAATTCAGGATGCCAGGAAATGCTGACATGGAAGGGATAAGGGCACACTTGGAGAATGGAGTGTTGAAGGTAATTGTCCCAAAGTTGCCTCAAGAGAAGAAGAAAGAAGCTAAGGTTGTGAAGATTGAGGAAGGGGCGAAATCTGGTGGGGAAGATCTTAAGGCTACTAAGGCTGAAATGTAAAAAGAAAAAATGTAAAAAAAATTAATGGGTTTTGCAATAAAATGGTTCTTTTTTATCTTTTGGTAATTATGTATTAATATAGAGAAGTTGAAGAAGGATGTTAACTAGTGAG

mRNA sequence

AGAGAGCGGTGGTTTAGTCTAGAGAGATCTACATTTGCGTGGAATCAAGACTATATCCCCGAAGTATTGGCCTTTCACCGTTATTCTACTATATAAAGCCTTTTTGTATCCCCCAACGGATTCAAGAATAAAGTTGAAGTTGTGCTGTGTTGTTTGTGTGAAGTTTCAATCAAGAACTATGGCGATGATGGGGTTACCCAGAAATTCATTGTTCCTAATTCTTGGACTTGCATTCTACTTTCTCGCCGCTCAACAAGTTAATGCTTTGATGCCTTATCGCTCCATATGGGATATCATGCAGCCGGGTGGCTACTCGGAGGACCCGTTTCGGATCCTGGAACAGAGTCCACTGAGCGTACCGAAATCGGCGGTGGACACTCTAGCAGTGGCTCGTGCAGACTGGAAAGAAACAGAGAAGGAGCACGTGATATGGATGGACATTCCGGGAGTGAAGAGGGAGGACTTAAAGATCGAAGTAGAGGAGAATCGAGTGTTGAGGATAAGTGGAGAGATGAAGGGGGAAGCTGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGATGAGTTCATCAGGCAGGTTTTGGAGGCAATTCAGGATGCCAGGAAATGCTGACATGGAAGGGATAAGGGCACACTTGGAGAATGGAGTGTTGAAGGTAATTGTCCCAAAGTTGCCTCAAGAGAAGAAGAAAGAAGCTAAGGTTGTGAAGATTGAGGAAGGGGCGAAATCTGGTGGGGAAGATCTTAAGGCTACTAAGGCTGAAATGTAAAAAGAAAAAATGTAAAAAAAATTAATGGGTTTTGCAATAAAATGGTTCTTTTTTATCTTTTGGTAATTATGTATTAATATAGAGAAGTTGAAGAAGGATGTTAACTAGTGAG

Coding sequence (CDS)

ATGGCGATGATGGGGTTACCCAGAAATTCATTGTTCCTAATTCTTGGACTTGCATTCTACTTTCTCGCCGCTCAACAAGTTAATGCTTTGATGCCTTATCGCTCCATATGGGATATCATGCAGCCGGGTGGCTACTCGGAGGACCCGTTTCGGATCCTGGAACAGAGTCCACTGAGCGTACCGAAATCGGCGGTGGACACTCTAGCAGTGGCTCGTGCAGACTGGAAAGAAACAGAGAAGGAGCACGTGATATGGATGGACATTCCGGGAGTGAAGAGGGAGGACTTAAAGATCGAAGTAGAGGAGAATCGAGTGTTGAGGATAAGTGGAGAGATGAAGGGGGAAGCTGAGGTGGAAGGGGAGAGATGGCACCGGGCAGAGAGGATGAGTTCATCAGGCAGGTTTTGGAGGCAATTCAGGATGCCAGGAAATGCTGACATGGAAGGGATAAGGGCACACTTGGAGAATGGAGTGTTGAAGGTAATTGTCCCAAAGTTGCCTCAAGAGAAGAAGAAAGAAGCTAAGGTTGTGAAGATTGAGGAAGGGGCGAAATCTGGTGGGGAAGATCTTAAGGCTACTAAGGCTGAAATGTAA

Protein sequence

MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIEEGAKSGGEDLKATKAEM

Homology

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BLAST of Cmc01g0003701 vs. NCBI nr
Match: TYK06786.1 (22.0 kDa heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG
Sbjct: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKAEM
Sbjct: 181 EGAKSGGEDLKATKAEM 197

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BLAST of Cmc01g0003701 vs. NCBI nr
Match: XP_008454987.1 (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo] >KAA0031333.1 22.0 kDa heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE EVEG
Sbjct: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGEVEG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKAEM
Sbjct: 181 EGAKSGGEDLKATKAEM 197

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BLAST of Cmc01g0003701 vs. NCBI nr
Match: XP_004136960.1 (22.0 kDa heat shock protein [Cucumis sativus] >KGN43890.1 hypothetical protein Csa_017123 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 5.1e-99
Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYF A QQ NALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFFATQQANALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETE EHVIWMDIPG+KREDLKIEVEENRVLRISGEMKGEAEV G
Sbjct: 61  PKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAEVAG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSG+FWRQFR+PGNADMEGI+AHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKA M
Sbjct: 181 EGAKSGGEDLKATKAAM 197

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BLAST of Cmc01g0003701 vs. NCBI nr
Match: ADU55786.1 (HSP22.9 [Citrullus lanatus])

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 176/200 (88.00%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60
           MAMMGLPRN LFLIL L    F F+A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 60

Query: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGVLKVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVV 180

Query: 181 KIEEGAKSGGEDLKATKAEM 198
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEEGKAGGEDLKPTKAEM 200

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BLAST of Cmc01g0003701 vs. NCBI nr
Match: XP_022952789.1 (22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-78
Identity = 152/196 (77.55%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 4   MGLPRNSLFLILGLAFYFLAAQQ--VNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSVP 63
           MGLPR+ + + L LA       Q   +ALMPYRSIWDIMQPGG+SEDPFRILEQSPL VP
Sbjct: 3   MGLPRSMVCMFLPLAVLLFVTHQHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGVP 62

Query: 64  KSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGE 123
           +SAVDT+A+AR DWKET  EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE+EVEGE
Sbjct: 63  RSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEGE 122

Query: 124 RWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIEE 183
           RWHRAER SSSGRFWRQFR+PGNA+MEGI+AHLENGVLKV VPKLP+EKKKEAKVVKIEE
Sbjct: 123 RWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIEE 182

Query: 184 GAKSGGEDLKATKAEM 198
           G+ SGGED+K ++A++
Sbjct: 183 GSMSGGEDVKPSRADV 197

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BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot
Match: Q38806 (22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 72/132 (54.55%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 48  DPFRILEQSPLSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLR 107
           DPF+ILE+ PL + +     L+ AR DWKET + H I +DIPG+K++++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 108 ISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLP 167
           +SGE K E E +G++WHR ER  S G+FWRQF++P N DME ++A LENGVL + + KL 
Sbjct: 108 VSGERKREEEKKGDQWHRVER--SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLS 167

Query: 168 QEKKKEAKVVKI 180
            EK K  +VV I
Sbjct: 168 PEKVKGPRVVNI 177

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BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot
Match: P19244 (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-33
Identity = 72/135 (53.33%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 48  DPFRILEQSPLSVPKSAVD-TLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVL 107
           DPFR+LEQ P  V K     TL+ AR DWKET + HVI +D+PG+K++D+KIEVEENRVL
Sbjct: 51  DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVL 110

Query: 108 RISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKL 167
           R+SGE K E + +G+ WHR ER  S G+FWRQF++P N D++ ++A +ENGVL + + KL
Sbjct: 111 RVSGERKKEEDKKGDHWHRVER--SYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKL 170

Query: 168 PQEKKKEAKVVKIEE 182
             +K K  ++V I E
Sbjct: 171 SHDKIKGPRMVSIVE 183

[Close]

BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot
Match: P30236 (22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.6e-33
Identity = 86/194 (44.33%), Postives = 116/194 (59.79%), Query Frame = 0


Query: 15  LGLAFYFLAAQQVN-ALMPY--------RSIWDIMQPGGYSEDPFRILEQSPLSVPK-SA 74
           L L F  L   + N +L+P+          +W    P     DPFR+LE  P  V K  A
Sbjct: 6   LNLFFLLLCVAKANGSLLPFMDPPITLLADLWSDRFP-----DPFRVLEHIPFGVDKDEA 65

Query: 75  VDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWH 134
              ++ AR DWKET + HVI +D+PG+KRE++K+EVEENRVLR+SGE K E E +G+ WH
Sbjct: 66  SMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWH 125

Query: 135 RAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE-EGA 194
           R ER  S G+FWRQFR+P N D++ ++A LENGVL + + KL   K K  +VV I  E  
Sbjct: 126 RVER--SYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDH 185

Query: 195 KSGGEDLKATKAEM 198
           + G  +    K E+
Sbjct: 186 QQGNLNNDGAKQEL 192

[Close]

BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot
Match: Q53M11 (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 88/199 (44.22%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 18  AFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPL--------SVPKSAVDTLA 77
           A   + A    AL+PY         G   +DPFR+LEQSPL        +        +A
Sbjct: 18  AMVVMMAPPAAALVPYGY-------GYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVA 77

Query: 78  VARADWKETEKEHVIWMDIPGVKREDLKIEVEE-NRVLRISGEMK-------GEAEVEGE 137
           +AR DWKET + HV+ +D+PGV+R D+++EV+E +RVLR+SGE +        E E +G 
Sbjct: 78  LARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGV 137

Query: 138 RWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIEE 197
           RWHRAER  ++GRFWR+FRMP  AD+  + A L++GVL V VPK+P  + +E +VV I +
Sbjct: 138 RWHRAER--AAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAI-D 197

[Close]

BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot
Match: Q7XUW5 (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30
Identity = 73/146 (50.00%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 48  DPFRILEQSPLSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLR 107
           DPFRILE  P    +  V  L++AR DW+ET   H + +D+PG+++EDL++EVE+NRVLR
Sbjct: 53  DPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLR 112

Query: 108 ISGEMKGEAEVE----GERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIV 167
           ISGE + E   E    G+ WHR ER  S GRFWRQ R+P NAD++ I A L+NGVL V  
Sbjct: 113 ISGERRREETTEQKGGGDHWHREER--SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRF 172

Query: 168 PKLPQEKKKEAKVVKIEEGAKSGGED 190
            KL  ++ K  +VV I   A +GG+D
Sbjct: 173 RKLAPDQIKGPRVVGI---ASAGGDD 193

[Close]

BLAST of Cmc01g0003701 vs. ExPASy TrEMBL
Match: A0A5D3C8Y8 (22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00880 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG
Sbjct: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKAEM
Sbjct: 181 EGAKSGGEDLKATKAEM 197

[Close]

BLAST of Cmc01g0003701 vs. ExPASy TrEMBL
Match: A0A5A7SMA0 (22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00870 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE EVEG
Sbjct: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGEVEG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKAEM
Sbjct: 181 EGAKSGGEDLKATKAEM 197

[Close]

BLAST of Cmc01g0003701 vs. ExPASy TrEMBL
Match: A0A1S3BZX9 (22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE EVEG
Sbjct: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGEVEG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKAEM
Sbjct: 181 EGAKSGGEDLKATKAEM 197

[Close]

BLAST of Cmc01g0003701 vs. ExPASy TrEMBL
Match: A0A0A0K2J0 (Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99
Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLAFYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60
           MAMMGLPRNSLFLILGLAFYF A QQ NALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV
Sbjct: 1   MAMMGLPRNSLFLILGLAFYFFATQQANALMPYRSIWDIMQPGGYSEDPFRILEQSPLSV 60

Query: 61  PKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 120
           PKSAVDTLAVARADWKETE EHVIWMDIPG+KREDLKIEVEENRVLRISGEMKGEAEV G
Sbjct: 61  PKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAEVAG 120

Query: 121 ERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180
           ERWHRAERMSSSG+FWRQFR+PGNADMEGI+AHLENGVLKVIVPKLPQEKKKEAKVVKIE
Sbjct: 121 ERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVVKIE 180

Query: 181 EGAKSGGEDLKATKAEM 198
           EGAKSGGEDLKATKA M
Sbjct: 181 EGAKSGGEDLKATKAAM 197

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BLAST of Cmc01g0003701 vs. ExPASy TrEMBL
Match: H6TB39 (HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.5e-91
Identity = 176/200 (88.00%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60
           MAMMGLPRN LFLIL L    F F+A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 60

Query: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGVLKVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVV 180

Query: 181 KIEEGAKSGGEDLKATKAEM 198
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEEGKAGGEDLKPTKAEM 200

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BLAST of Cmc01g0003701 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 72/132 (54.55%), Postives = 96/132 (72.73%), Query Frame = 0


Query: 48  DPFRILEQSPLSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLR 107
           DPF+ILE+ PL + +     L+ AR DWKET + H I +DIPG+K++++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 108 ISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLP 167
           +SGE K E E +G++WHR ER  S G+FWRQF++P N DME ++A LENGVL + + KL 
Sbjct: 108 VSGERKREEEKKGDQWHRVER--SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLS 167

Query: 168 QEKKKEAKVVKI 180
            EK K  +VV I
Sbjct: 168 PEKVKGPRVVNI 177

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BLAST of Cmc01g0003701 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-26
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 48  DPFR--ILEQSPLSVPKSAVDTLAV--ARADWKETEKEHVIWMDIPGVKREDLKIEVEEN 107
           DPF       S L+   +A D  A   AR DWKET + HV   D+PG+K+E++K+EVE+ 
Sbjct: 25  DPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDK 84

Query: 108 RVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIV 167
            VL+ISGE   E E + ++WHR ER  +SG+F R+FR+P NA ME ++A +ENGVL V+V
Sbjct: 85  NVLQISGERSKENEEKNDKWHRVER--ASGKFMRRFRLPENAKMEEVKATMENGVLTVVV 144

Query: 168 PKLPQEKKKEAKVVKI 180
           PK P EKK + K + I
Sbjct: 145 PKAP-EKKPQVKSIDI 157

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BLAST of Cmc01g0003701 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-26
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 48  DPFR-ILEQSPL-SVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRV 107
           DPF   L  S L + P   V     A+ DW+ET + HV   D+PG+++E++K+EVE+  +
Sbjct: 25  DPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNI 84

Query: 108 LRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPK 167
           L+ISGE   E E + ++WHR ER  SSG+F R+FR+P NA ME I+A +ENGVL V VPK
Sbjct: 85  LQISGERSNENEEKNDKWHRVER--SSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPK 144

Query: 168 LPQEKKKEAKVVKI 180
           +P EKK E K + I
Sbjct: 145 VP-EKKPEVKSIDI 155

[Close]

BLAST of Cmc01g0003701 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-26
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 21  FLAAQQVNALMPYR-SIWDIMQPGGYSEDPFR-ILEQSPLSVPKSAVDTLAVARADWKET 80
           F   ++ N   P+   +W          DPF   L     + P   V     A+ DW+ET
Sbjct: 7   FFGGRRTNVFDPFSLDVW----------DPFEGFLTPGLTNAPAKDVAAFTNAKVDWRET 66

Query: 81  EKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQ 140
            + HV   D+PG+K+E++K+EVE+  +L+ISGE   E E + + WHR ER  SSG+F R+
Sbjct: 67  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVER--SSGKFMRR 126

Query: 141 FRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVVKI 180
           FR+P NA +E ++A +ENGVL V VPK+ QE K E K V I
Sbjct: 127 FRLPENAKVEEVKASMENGVLSVTVPKV-QESKPEVKSVDI 154

[Close]

BLAST of Cmc01g0003701 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 64/136 (47.06%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 48  DPFRILEQSP---LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENR 107
           DPF +    P   L  P S+   +A AR DWKET + HV   D+PG+K+E++K+E+E++ 
Sbjct: 20  DPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDS 79

Query: 108 VLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVP 167
           VL+ISGE   E E + + WHR ER  SSG F R+FR+P N  M+ ++A +ENGVL V VP
Sbjct: 80  VLKISGERHVEKEEKQDTWHRVER--SSGGFSRKFRLPENVKMDQVKASMENGVLTVTVP 139

Query: 168 KLPQEKKKEAKVVKIE 181
           K+   KKK A+V  I+
Sbjct: 140 KVETNKKK-AQVKSID 152

The following BLAST results are available for this feature:

BLAST of Cmc01g0003701 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06786.1	1.2e-103	100.00	22.0 kDa heat shock protein-like [Cucumis melo var. makuwa]	[more]
XP_008454987.1	3.4e-103	99.49	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo] >KAA0031333.1 22.0 kD...	[more]
XP_004136960.1	5.1e-99	94.92	22.0 kDa heat shock protein [Cucumis sativus] >KGN43890.1 hypothetical protein C...	[more]
ADU55786.1	1.1e-90	88.00	HSP22.9 [Citrullus lanatus]	[more]
XP_022952789.1	5.0e-78	77.55	22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Cmc01g0003701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38806	1.7e-33	54.55	22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1	[more]
P19244	3.9e-33	53.33	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]
P30236	8.6e-33	44.33	22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1	[more]
Q53M11	2.1e-31	44.22	21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 ...	[more]
Q7XUW5	5.2e-30	50.00	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 ...	[more]

BLAST of Cmc01g0003701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C8Y8	5.7e-104	100.00	22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7SMA0	1.7e-103	99.49	22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BZX9	1.7e-103	99.49	22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV...	[more]
A0A0A0K2J0	2.5e-99	94.92	Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1	[more]
H6TB39	5.5e-91	88.00	HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]

BLAST of Cmc01g0003701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10250.1	1.2e-34	54.55	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	1.6e-26	48.53	heat shock protein 18.2	[more]
AT1G53540.1	2.1e-26	48.51	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	6.1e-26	40.99	heat shock protein 17.4	[more]
AT1G59860.1	1.0e-25	47.06	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 32..180 e-value: 1.8E-35 score: 123.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 60..176
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 74..179 e-value: 8.4E-25 score: 86.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 64..180 score: 24.89743
None	No IPR available	PANTHER	PTHR11527:SF271	22.0 KDA CLASS IV HEAT SHOCK PROTEIN-LIKE	coord: 12..185
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 72..165 e-value: 5.65496E-44 score: 139.748
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 12..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0003701.1	Cmc01g0003701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding