Cmc00g0001991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc00g0001991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem II CP43 reaction center protein
Location	CMiso1.1chr00: 2367714 .. 2368583 (+)
RNA-Seq Expression	Cmc00g0001991
Synteny	Cmc00g0001991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACCTGGGCCCCGGGGGGGGGGAGATGTCAGAAAAATTTCCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGCGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTGACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACTGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA

mRNA sequence

ATGATACCTGGGCCCCGGGGGGGGGGAGATGTCAGAAAAATTTCCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGCGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTGACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACTGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA

Coding sequence (CDS)

ATGATACCTGGGCCCCGGGGGGGGGGAGATGTCAGAAAAATTTCCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGCGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTGACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACTGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA

Protein sequence

MIPGPRGGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN

Homology

[Close]

BLAST of Cmc00g0001991 vs. NCBI nr
Match: YP_009501732.1 (photosystem II CP43 chlorophyll apoprotein [Passiflora serratifolia] >AXB38378.1 photosystem II CP43 chlorophyll apoprotein [Passiflora serratifolia])

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. NCBI nr
Match: YP_009751902.1 (photosystem II 43 kDa protein [Cyclanthera pedata] >QIT04720.1 photosystem II 43 kDa protein [Cyclanthera pedata])

HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 180 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 239

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 240 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 299

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 300 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 359

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 360 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 419

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 420 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 461

[Close]

BLAST of Cmc00g0001991 vs. NCBI nr
Match: XP_022975445.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111474790 [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 528 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 587

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 588 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 647

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 648 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 707

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 708 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 767

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 768 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 809

[Close]

BLAST of Cmc00g0001991 vs. NCBI nr
Match: YP_009752916.1 (photosystem II 43 kDa protein [Momordica sessilifolia] >QIT05988.1 photosystem II 43 kDa protein [Momordica sessilifolia])

HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 180 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 239

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 240 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 299

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 300 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 359

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 360 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 419

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 420 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 461

[Close]

BLAST of Cmc00g0001991 vs. NCBI nr
Match: QWQ50105.1 (photosystem II CP43 chlorophyll apoprotein [Cyclanthera pedata])

HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot
Match: Q2QD93 (Photosystem II CP43 reaction center protein OS=Cucumis sativus OX=3659 GN=psbC PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 1.1e-166
Identity = 279/283 (98.59%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGAN+GSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot
Match: B1NWE6 (Photosystem II CP43 reaction center protein OS=Manihot esculenta OX=3983 GN=psbC PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 9.6e-166
Identity = 278/283 (98.23%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot
Match: Q09G50 (Photosystem II CP43 reaction center protein OS=Platanus occidentalis OX=4403 GN=psbC PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 9.6e-166
Identity = 278/283 (98.23%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 180 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 239

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 240 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 299

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 300 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 359

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 360 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 419

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 420 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 461

[Close]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot
Match: Q2VEI0 (Photosystem II CP43 reaction center protein OS=Solanum tuberosum OX=4113 GN=psbC PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 9.6e-166
Identity = 276/283 (97.53%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGAL+VFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot
Match: B2XWK1 (Photosystem II CP43 reaction center protein OS=Fagopyrum esculentum subsp. ancestrale OX=180217 GN=psbC PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 1.3e-165
Identity = 277/283 (97.88%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL
Match: A0A2Z5D7G5 (Photosystem II CP43 reaction center protein OS=Passiflora serratifolia OX=231188 GN=psbC PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL
Match: A0A6M3RWB3 (Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii OX=3677 GN=psbC PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.2e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL
Match: A0A1S4EU06 (Photosystem II CP43 reaction center protein OS=Cucumis melo OX=3656 GN=psbC PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.2e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL
Match: A0A249RZ79 (Photosystem II CP43 reaction center protein OS=Cucumis melo var. cantalupensis OX=3658 GN=psbC PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.2e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL
Match: A0A1P8LFP8 (Photosystem II CP43 reaction center protein OS=Citrullus mucosospermus OX=519315 GN=psbC PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.2e-164
Identity = 280/283 (98.94%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WLATSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLATSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Cmc00g0001991 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C )

HSP 1 Score: 575.9 bits (1483), Expect = 1.9e-164
Identity = 274/283 (96.82%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 7   GGGDVRKISNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWH 66
           GGGDVRKI+NLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICI GGIWH
Sbjct: 192 GGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWH 251

Query: 67  ILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQ 126
           ILTKPFAWARRALVWSGEAYLSYSL ALSV GFIACCFVWFNNTAYPSEFYGPTGPEASQ
Sbjct: 252 ILTKPFAWARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSEFYGPTGPEASQ 311

Query: 127 AQALTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 186
           AQA TFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG
Sbjct: 312 AQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRG 371

Query: 187 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSCWLATSH 246
           PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS WL+TSH
Sbjct: 372 PNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRS-WLSTSH 431

Query: 247 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 290
           FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 432 FVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

The following BLAST results are available for this feature:

BLAST of Cmc00g0001991 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009501732.1	3.9e-164	98.94	photosystem II CP43 chlorophyll apoprotein [Passiflora serratifolia] >AXB38378.1...	[more]
YP_009751902.1	6.7e-164	98.94	photosystem II 43 kDa protein [Cyclanthera pedata] >QIT04720.1 photosystem II 43...	[more]
XP_022975445.1	6.7e-164	98.94	LOW QUALITY PROTEIN: uncharacterized protein LOC111474790 [Cucurbita maxima]	[more]
YP_009752916.1	6.7e-164	98.94	photosystem II 43 kDa protein [Momordica sessilifolia] >QIT05988.1 photosystem I...	[more]
QWQ50105.1	6.7e-164	98.94	photosystem II CP43 chlorophyll apoprotein [Cyclanthera pedata]	[more]

BLAST of Cmc00g0001991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD93	1.1e-166	98.59	Photosystem II CP43 reaction center protein OS=Cucumis sativus OX=3659 GN=psbC P...	[more]
B1NWE6	9.6e-166	98.23	Photosystem II CP43 reaction center protein OS=Manihot esculenta OX=3983 GN=psbC...	[more]
Q09G50	9.6e-166	98.23	Photosystem II CP43 reaction center protein OS=Platanus occidentalis OX=4403 GN=...	[more]
Q2VEI0	9.6e-166	97.53	Photosystem II CP43 reaction center protein OS=Solanum tuberosum OX=4113 GN=psbC...	[more]
B2XWK1	1.3e-165	97.88	Photosystem II CP43 reaction center protein OS=Fagopyrum esculentum subsp. ances...	[more]

BLAST of Cmc00g0001991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z5D7G5	1.9e-164	98.94	Photosystem II CP43 reaction center protein OS=Passiflora serratifolia OX=231188...	[more]
A0A6M3RWB3	3.2e-164	98.94	Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii OX=3677 G...	[more]
A0A1S4EU06	3.2e-164	98.94	Photosystem II CP43 reaction center protein OS=Cucumis melo OX=3656 GN=psbC PE=3...	[more]
A0A249RZ79	3.2e-164	98.94	Photosystem II CP43 reaction center protein OS=Cucumis melo var. cantalupensis O...	[more]
A0A1P8LFP8	3.2e-164	98.94	Photosystem II CP43 reaction center protein OS=Citrullus mucosospermus OX=519315...	[more]

BLAST of Cmc00g0001991 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00280.1	1.9e-164	96.82	photosystem II reaction center protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 14..284 e-value: 3.8E-83 score: 279.9
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 6..288
IPR044900	Photosystem II CP43 reaction centre protein superfamily	GENE3D	1.10.10.670	photosystem ii from thermosynechococcus elongatus	coord: 119..214 e-value: 3.4E-57 score: 192.1
None	No IPR available	PANTHER	PTHR33180:SF21	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 6..288
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 3..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc00g0001991.1	Cmc00g0001991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0010242	oxygen evolving activity