Cmc00g0001501 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTCAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATTTCTTTCTATTACTATGAAATTCATAAATGAAGTAGTTAATGGTGGGCTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAAGAGATCAAAACTCTGGAATGGAAATGGAAAAGAGATCTCACTCCAGTTCCTTCGGAAATGGTCAGATCTTTGGCACAAGAAGAAGGGGTTGATCCATATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTCATAATACCGAGTTGGCTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAAGCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAGGAGCTGTTGACAATTGAATACAATTTTTCCCATTATTTTCATTTTCGTATCCGTAATAGTGCGAAAAGAAGGAAGGCCCAATTCCAAGTTCTTCAAGAATAGTGGCCTTGACTTTCTCGACCCTTTGCCTTAGGATTAGTCAGTTCTATTTCTCGATGGGGGCA CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTCAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATTTCTTTCTATTACTATGAAATTCATAAATGAAGTAGTTAATGGTGGGCTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAAGAGATCAAAACTCTGGAATGGAAATGGAAAAGAGATCTCACTCCAGTTCCTTCGGAAATGGTCAGATCTTTGGCACAAGAAGAAGGGGTTGATCCATATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTCATAATACCGAGTTGGCTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAAGCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAGGAGCTGTTGACAATTGAATACAATTTTTCCCATTATTTTCATTTTCGTATCCGTAATAGTGCGAAAAGAAGGAAGGCCCAATTCCAAGTTCTTCAAGAATAGTGGCCTTGACTTTCTCGACCCTTTGCCTTAGGATTAGTCAGTTCTATTTCTCGATGGGGGCA ATGAAATTCATAAATGAAGTAGTTAATGGTGGGCTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAAGAGATCAAAACTCTGGAATGGAAATGGAAAAGAGATCTCACTCCAGTTCCTTCGGAAATGGTCAGATCTTTGGCACAAGAAGAAGGGGTTGATCCATATCATCTTGACTGGGTTCTGA MKFINEVVNGGLTIILFAMTNLVCVPKKSCSFFGVSKGRGKRSKLWNGNGKEISLQFLRKWSDLWHKKKGLIHIILTGF Homology
BLAST of Cmc00g0001501 vs. NCBI nr
Match: AAO18644.1 (hypothetical protein [Lactuca sativa] >AAY57522.1 unknown [Lactuca sativa] >PLY68380.1 hypothetical protein LSAT_7X380 [Lactuca sativa]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Cmc00g0001501 vs. NCBI nr
Match: PLY85626.1 (hypothetical protein LSAT_0X40381 [Lactuca sativa]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Cmc00g0001501 vs. NCBI nr
Match: KAF5753271.1 (hypothetical protein HanXRQr2_CPg0836761 [Helianthus annuus]) HSP 1 Score: 55.1 bits (131), Expect = 3.2e-04 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Cmc00g0001501 vs. NCBI nr
Match: NP_054551.1 (hypothetical protein NitaCp077 [Nicotiana tabacum] >NP_054567.1 hypothetical protein NitaCp093 [Nicotiana tabacum] >YP_004891659.1 unnamed protein product [Nicotiana undulata] >YP_004891678.1 unnamed protein product [Nicotiana undulata] >YP_358730.1 hypothetical protein NisyCp086 [Nicotiana sylvestris] >YP_358749.1 hypothetical protein NisyCp107 [Nicotiana sylvestris] >YP_398916.1 hypothetical protein NitoCp085 [Nicotiana tomentosiformis] >YP_398935.1 hypothetical protein NitoCp106 [Nicotiana tomentosiformis] >AEO95726.1 hypothetical protein [synthetic construct] >AEO95617.1 hypothetical protein [Nicotiana undulata] >AEO95635.1 hypothetical protein [Nicotiana undulata] >AEO95743.1 hypothetical protein [synthetic construct] >CAA77391.1 hypothetical protein [Nicotiana tabacum]) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-04 Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Cmc00g0001501 vs. NCBI nr
Match: YP_001109551.1 (hypothetical protein Poptr_cp073 [Populus trichocarpa] >YP_001109568.1 hypothetical protein Poptr_cp090 [Populus trichocarpa] >APO09045.1 hypothetical protein [Populus nigra] >ABO36755.1 conserved hypothetical protein [Populus trichocarpa] >ABO36772.1 conserved hypothetical protein [Populus trichocarpa] >APO09062.1 hypothetical protein [Populus nigra]) HSP 1 Score: 53.5 bits (127), Expect = 9.5e-04 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of Cmc00g0001501 vs. ExPASy TrEMBL
Match: Q85XZ1 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X380 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.5e-07 Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Cmc00g0001501 vs. ExPASy TrEMBL
Match: A0A2J6LE72 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X40381 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.5e-07 Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Cmc00g0001501 vs. ExPASy TrEMBL
Match: Q3C1P3 (Uncharacterized protein OS=Nicotiana sylvestris OX=4096 GN=NisyCp086 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Cmc00g0001501 vs. ExPASy TrEMBL
Match: Q37073 (Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=NitaCp077 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Cmc00g0001501 vs. ExPASy TrEMBL
Match: Q33BX9 (Uncharacterized protein OS=Nicotiana tomentosiformis OX=4098 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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