Cmc00g0001441 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc00g0001441
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribosomal protein L5
Location	CMiso1.1chr00: 1467305 .. 1467766 (+)
RNA-Seq Expression	Cmc00g0001441
Synteny	Cmc00g0001441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTTTCTTTCAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGAGATCATCGAGATCTTCTCTAA

mRNA sequence

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTTTCTTTCAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGAGATCATCGAGATCTTCTCTAA

Coding sequence (CDS)

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTTTCTTTCAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGAGATCATCGAGATCTTCTCTAA

Protein sequence

MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFFLSNHYRNSNVFLKFSGRNTGKLHEILDGNGVFRILPGTGDHRDLL

Homology

[Close]

BLAST of Cmc00g0001441 vs. NCBI nr
Match: KAA0034876.1 (ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.6e-52
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 154

[Close]

BLAST of Cmc00g0001441 vs. NCBI nr
Match: AEN56134.1 (ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5 [Cucumis melo var. momordica])

HSP 1 Score: 216.5 bits (550), Expect = 1.6e-52
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 107

[Close]

BLAST of Cmc00g0001441 vs. NCBI nr
Match: YP_004849341.1 (ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47
Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFF 109
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +FF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFF 108

[Close]

BLAST of Cmc00g0001441 vs. NCBI nr
Match: AAP33159.1 (ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis sativus] >AAP33162.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFF 109
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +FF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFF 108

[Close]

BLAST of Cmc00g0001441 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-39
Identity = 88/102 (86.27%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PYDF  KNGKLAMEI RGQK IQ
Sbjct: 4   LDFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           T RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNF
Sbjct: 64  TQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNF 105

[Close]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.7e-37
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   IRVVPK PY+F  KNGKLAMEI  GQK IQ
Sbjct: 4   LNFHYEDVLRQDLLLKLNYANVMEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFFL 110
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF +
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLV 107

[Close]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36
Identity = 82/106 (77.36%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPK--EPYDFRRKNGKLAMEILRGQKL 66
           L FHYED+ RQD LLK N  NVMEVPG   IR+VPK    YDF  KNGKLAMEILRGQK 
Sbjct: 4   LNFHYEDVLRQDLLLKLNLANVMEVPGLCEIRIVPKTSSTYDFIIKNGKLAMEILRGQKF 63

Query: 67  IQT-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFFL 110
           IQT RGSTGKSFRSNPFLESNKDKGYVSDLAR+S LRGH MSNF +
Sbjct: 64  IQTERGSTGKSFRSNPFLESNKDKGYVSDLARQSILRGHGMSNFLV 109

[Close]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33
Identity = 76/102 (74.51%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLL +    + +  GS  IRVVP  PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLNRITPTLWKFLGSCEIRVVPNGPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNF 105

[Close]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 74/104 (71.15%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   I VVPK       KNGKLAMEI  GQKL Q
Sbjct: 8   LYFHYEDVLRQDLLLKLNYANVMEVPGLCKIIVVPKTAPSI--KNGKLAMEISCGQKLKQ 67

Query: 67  TRGSTGKSFRSNPFLESNKD-KGYVSDLARESTLRGHEMSNFFL 110
            R STGKSFRSNPFL SNKD KGYVSDLAR+STLRGH MS+F +
Sbjct: 68  -RASTGKSFRSNPFLGSNKDKKGYVSDLARQSTLRGHGMSHFLV 108

[Close]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-22
Identity = 65/107 (60.75%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 6   QLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLI 65
           +L+FHY  + R D LLK N+ N+MEVP    I VVPK P +F  KN KLAMEI+ GQK I
Sbjct: 8   RLEFHYNQVIRPDLLLKINYENIMEVPRLCKIIVVPKAPSNF-IKNVKLAMEIVCGQKFI 67

Query: 66  QT--RGSTGKSFRSNPFL---ESNKDKGYVSDLARESTLRGHEMSNF 108
           QT  RGSTGKSFR N F+   ES +D GYV+ LAR STLRGH M NF
Sbjct: 68  QTRSRGSTGKSFRFNKFVLNQESKRDTGYVTYLAR-STLRGHIMYNF 112

[Close]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL
Match: A0A5A7SYB1 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48303G00010 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 154

[Close]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL
Match: G3EU44 (Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 107

[Close]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL
Match: A0A3S9JIG3 (Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 107

[Close]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL
Match: G3EIZ3 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-47
Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFF 109
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +FF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFF 108

[Close]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL
Match: Q7Y6H0 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.1e-45
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFF 109
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +FF
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFF 108

[Close]

BLAST of Cmc00g0001441 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-42
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNF 105

[Close]

BLAST of Cmc00g0001441 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-42
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNF 108
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNF 105

The following BLAST results are available for this feature:

BLAST of Cmc00g0001441 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034876.1	1.6e-52	100.00	ribosomal protein L5 [Cucumis melo var. makuwa]	[more]
AEN56134.1	1.6e-52	100.00	ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5...	[more]
YP_004849341.1	2.1e-47	91.67	ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis...	[more]
AAP33159.1	1.3e-44	88.89	ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis...	[more]
YP_009913650.1	2.1e-39	86.27	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]

BLAST of Cmc00g0001441 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42793	7.7e-37	77.88	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
Q05492	2.9e-36	77.36	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P49388	1.0e-33	74.51	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
P51409	1.3e-28	71.15	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
P26860	9.1e-22	60.75	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of Cmc00g0001441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYB1	7.9e-53	100.00	Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
G3EU44	7.9e-53	100.00	Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1	[more]
A0A3S9JIG3	7.9e-53	100.00	Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1	[more]
G3EIZ3	1.0e-47	91.67	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]
Q7Y6H0	6.1e-45	88.89	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]

BLAST of Cmc00g0001441 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	3.6e-42	84.31	Ribosomal L5P family protein	[more]
ATMG00210.1	3.6e-42	84.31	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 6..140 e-value: 9.8E-8 score: 33.8
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 7..109
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 5..108
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 5..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc00g0001441.1	Cmc00g0001441.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome