CmaCh20G011310 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh20G011310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionzinc finger CCCH domain-containing protein 62-like
LocationCma_Chr20: 8963516 .. 8967099 (+)
RNA-Seq ExpressionCmaCh20G011310
SyntenyCmaCh20G011310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGCAAGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTCGTTTATCTATACTCGTCGTCGGAGGACGACGAAGAGGAATCGGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAAAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGGTATTTTAGACCGTTTCTTCCTTTTCCATTCATCACTCCGTCATGGTGTTCAAATTCGAGTTCAAAGTCCCAGTGTCGATTGAGAGAAATGAAATCGATGATTAGATAGGTTGTTGGGAAATTCGTAGGGTATTGGATCTCTTAATTATCTCATTTCAAACATGTTCTGTCGCAGAGAATAAAAATTTAGATTCCTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGTACGTGGATTCTTCATCTTTAAACTCAAGATACACATCTTAATATTGCGTTCAATTAGGAAATTTTTGAAGTTTCCATCTAGTCCGATCGCTGAATATTTGAAATTGTTAGTGCATTTTCATGGTGGAAATCTGCTATGTACTCATCTATGGAAGTCTTCTGATATTTAGAGAAGCGACTATTGAGTGTTTCGGTAAATGTGGATTGTCATCAATTATGATTCTATAGACTTTAATAGATGGAAAACAGAAGATTTTTTAGATAATTTTATGTTGTGAAATTGAGTTTTCCTTGTTCCTCAATGGATTTTGGAGCCTTTTAACTTCTAGTTCTGCATTGATACATATCAAACCATAAGGCAGCAAAACATAATTTGGGTTTGGTACTGTTTTCCATTTGTTGCTGGTAAATCTTGATTACCTGATCTGTATTCTACCTCTTCCCTTCTGTTGTAATCACTTTGGGTCTCTGCAAAGTTGCACCATTATATAGAAGTTATTAAGCAAAAAGGGAGGAGATTCTGAAAGAATAATGTGCCATTTATTCAATTCTTCACAAGGAGTTAAATATACAATAGGTATTAGGCACAACTTGTGAGATCCCACATCGGTTGGAGCGGGGAACAAAACATCCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACACGTTTTAAAACCATGAAGCTGATGGCGATATGTAACGGGCCAAAATGGACAATATCTGCTAGCGGCGTCTGTTACAAATGGTATCAAAACTAGGCACCGAGCGGTGTGCTAGCGAGGACGCTGGCCCTCAAGGGAGTGAATTGTGAGTTCTACATCGTTTGGAGAGGGGAACGAAGCATTTCTTATAAGGGTGTAGAAACTTCTCCCTAGTAGACGCGTTTCAAACCGTGAAGCTAACGGCGATACGTAACGGGCCAAAGCGGACAATATCTGTTAGCGATGACTATTACCCAACTACTCCTAACAAAACTTCTTTGCTCTCTTCTTTTTCTCCCAACTCAGGATGAAGGATGGAAATGGTGAAGTGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTAATTTCTATGTACATTTGTCATAGTATTTTCTTTGATCACTCTTTTAGTGGCTGTAATTATTCTATTAAAACAACAATGCAGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTACTCAAACAAGTTTCTCTTCCACCAGTAGTCTTGTGTTAGATATTTTAGATTTGCACTCCTAATTCTTGTAGCTTAATTTTTTTATAGGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAGAGCTATGGTGCCAGCAAACAGCAGCATACTTTTACTGTAAGGCTATTTTTTCTGTTCTTGAAATCATTTTCTCATATCGTAATTTGAATTCGTTGTGCATTATTAGTACCACAATTCGTAATATGGTCAATATTGTAATATTCACTGCAATTATTATGTAGCAGTCGGTGAGAAATATACTTGTGCATTTTTTTCTTTTCTTTTGTTCATTCGCTTATATATTTTTTCATTTGCGATTCATCTTTCCAACGCTTGTGACTATAATGTGCTAGGTCGAAGTTTTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGGTAAGTTCTTACTTACGTACATAAATATATTTTATTTTCATACAAAGCATTTGCGATTGTGGGGATTTGTCCTGTGGATAAAAATTATAAATCAAATTGATTTTCTTAGTTGAGGTATTGCTGGTGGAAGTGTACGTATGTAAATATGAATTTAGTAACAGAACAATGCTCATTGTGTCTTAAATTCTCAAGCATGAACCAAGTGAGTGAGTTTGGCTCCAAGATATCCATCCTTTCCAAATTTGTATATAAGAGCTAAAGTTCTACGAAATATGATTTTGCTAAAGTTTGTATTGTCACCTACAAACATCACCTACATACCAGGCGATTGATGGATGTTATCTCCCCGTTGAGTTTGTTTGATTCTACGTATGATTTATGATTTATGAATTTTGTGCATTAGGTGATTGATAGGGATATCTCACTAATCAAACATGTATAGAGTATGTTCTCATATGTCATAGGTGATCGATAGGAATATCTCCCCAGTAAAGCATGCATGAGCGAACCAAACTAAGATTAGAGTAGTGGAGCTAGAGCAAATTATACGTTGACATCTAGCACCTTAGGATCGTGAGTGGTATTTGGGTCCAAAATATTCATCCTTTCCAAATTTGTATAAAAGAGCTAAAGTTTGTATGTCAGATCTTGTTTCTGATCATAAATGCAAGCCAATGACCAATATTGCTGAGTTTTCTTCATTATTTGTATGTTTTACTCAGCTTTGGAATGATGAAGCTGAAAGAATTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTCTACAAATCGGAGGTGGTATAATTCACAACCACTACTCCCCAAAACATGAAAAGGAGCTTGCTTGCTGCAATCTAATAAAAGATTGAATGTTACCATATTTTTGTATTGTAATGTCCAGGAAGTGGAAAGAATCAAGGACGTGCTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTTACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAACAACTCTTCAAATAATCTAACCAAAATTGACTTCAAAGTACCGGGAAAAGTCAAAACAGGCATTTAGGTTCGTTTGTAAATGTAATTAGCCTTTACTTTCACGATATCTCGTGATGAAGTAAGGTTTTAAATGAATTTAATTAGATGTAAAATGGTTAAGATCAACACTATCT

mRNA sequence

TCCGCAAGGAAATGCCTGAAAGGGGTAGCAAACGAAGAGTCGTTTATCTATACTCGTCGTCGGAGGACGACGAAGAGGAATCGGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAAAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCCTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGTGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAGAGCTATGGTGCCAGCAAACAGCAGCATACTTTTACTGTCGAAGTTTTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGCTTTGGAATGATGAAGCTGAAAGAATTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTCTACAAATCGGAGGAAGTGGAAAGAATCAAGGACGTGCTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAGGAAGACAGAATGGACATCGAAAAATATAGTGGTCTGCTCTTGAGCTTACAAATGGCCTTTGAACTTGCGTTACAAATTGCTCTTTTAAGTTTGAAAAGGAATCAGTGAACAACTCTTCAAATAATCTAACCAAAATTGACTTCAAAGTACCGGGAAAAGTCAAAACAGGCATTTAGGTTCGTTTGTAAATGTAATTAGCCTTTACTTTCACGATATCTCGTGATGAAGTAAGGTTTTAAATGAATTTAATTAGATGTAAAATGGTTAAGATCAACACTATCT

Coding sequence (CDS)

ATGCCTGAAAGGGGTAGCAAACGAAGAGTCGTTTATCTATACTCGTCGTCGGAGGACGACGAAGAGGAATCGGACGAGGAGTACGATGATGAAGACGATGACGAAGGGGAATCGGAAAAGGAGTTTGATAATGAATGCAGCGACAACGATTGTGATGAAGTTCTCTCCCAGCGAGTCATCCGCTTTCTTAAAGAGAATAAAAATTTAGATTCCTTAACACTTCATGATTGCAAAGCTTATTTACGGGAGAATAGGCTAAGAATAGCGGGGACTAAAGCCGTCTGTATTCAAAGACTCCAGGAACATTGGAGGATGAAGGATGGAAATGGTGAAGTGCACTATCCAAGGTCATCCTTTGTTGTCAATTGTACTGGTGATGTTTGTAGGGGAGATACTGTTTTGTTCACTCAGAAAGTTTATGCAAAGTTTGATAAAGTAACTAGGCGTGGAGGGCTTATAGGGAAGAGAACTGTAGCAGGGAGGGTAGTGAAGGAGAGCTATGGTGCCAGCAAACAGCAGCATACTTTTACTGTCGAAGTTTTATGGAGCAGGGGAGTTCGGAAGTTACCCCCACTTTATCCTCTACTTGTTAAGGGTCGAAATCTCTATAAACTAAGAACTTTCAGACGGCTTTGGAATGATGAAGCTGAAAGAATTCAAGTTCTAGCAGAGAAGCACAAAAGAGGTGCGGCTGCTCGGGGTGTACGAGCATTGCAGAAAAGGAAAAGAAAACTTCTACAAATCGGAGGAAGTGGAAAGAATCAAGGACGTGCTCAACTTCCAAGACAAGCCTTGAACAGTAACGGGAGTCGCAAGAGTATGCGTTCAAGGGACAAGAACAATGCTGTTCGTAGACACCCAGCGTAG

Protein sequence

MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA
Homology
BLAST of CmaCh20G011310 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-41
Identity = 121/308 (39.29%), Postives = 166/308 (53.90%), Query Frame = 0

Query: 3   ERGSKRRVVYLYSSSEDDEEESDEEYD--DEDDDEGES-------------EKEFDNEC- 62
           E GS+  V      S+D+EEE  E YD  +EDD E  S             +  FD    
Sbjct: 25  EEGSEEEV-----ESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAAD 84

Query: 63  SDNDCDEVLSQRVIRF------------------------------LKENKNLDSLTLHD 122
            D + D VL  R+ R                               L  +  L+ L +++
Sbjct: 85  GDLEVDAVLRSRMARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYE 144

Query: 123 CKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFVVNCTGDVCRGDTVLFT 182
           CKAYLR ++LR++G K V + R++    +K   GEV YP SSFV+NC GD C+GD V+F 
Sbjct: 145 CKAYLRMHKLRLSGNKEVLLTRIRGQIEVKT-MGEVKYPVSSFVLNCQGDSCKGDVVVFE 204

Query: 183 QKVYAKFDKVTR--RGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYP 242
           Q +Y +     R  +G L G+RT AGR++KESYG  KQQHTFT+E+LWSRG +  PPL+P
Sbjct: 205 QNIYKRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHP 264

Query: 243 LLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAA---RGVRALQKRKRKLLQIGGS 260
           LL+KGRNLYK +T R+ W DE ER + L EKH RG  A   R VR   K   ++ ++  +
Sbjct: 265 LLIKGRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNRN 324

BLAST of CmaCh20G011310 vs. ExPASy TrEMBL
Match: A0A6J1I2K8 (zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470342 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60
           MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI
Sbjct: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 288

BLAST of CmaCh20G011310 vs. ExPASy TrEMBL
Match: A0A6J1EQD5 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111434886 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.7e-141
Identity = 265/288 (92.01%), Postives = 274/288 (95.14%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60
           MPERGSKRRV+YL SSSE+DEEES       DD+EGE E+EFDNECSDNDCDE+LSQRVI
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEES-------DDEEGEWEEEFDNECSDNDCDELLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGE HYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           RKRKL+Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

BLAST of CmaCh20G011310 vs. ExPASy TrEMBL
Match: A0A0A0LQ19 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.6e-116
Identity = 228/301 (75.75%), Postives = 252/301 (83.72%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEE---------------SDEEYDDEDDDEGESEKEFDNE 60
           M +RGSKR V+ + SSS  D +E               S+EE+DD+DDDEGES +EFDNE
Sbjct: 1   MTKRGSKRTVICISSSSSSDADEEESEEYDDEDDGVGDSEEEFDDKDDDEGESGEEFDNE 60

Query: 61  CSDNDCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRM 120
            SDN CDEVLS+RVIRFLKENKNLDSLTL+DCKAYLRE+RLRIAGTKAVCIQR++EHWR+
Sbjct: 61  ESDNGCDEVLSKRVIRFLKENKNLDSLTLNDCKAYLRESRLRIAGTKAVCIQRVKEHWRL 120

Query: 121 KDGNGEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKE 180
           K+GNGEV YP+SSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKE
Sbjct: 121 KNGNGEVQYPKSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKE 180

Query: 181 SYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEK 240
           SYGASKQQHTFTVEVLWSRGVRKL PLYPLLVKGRNLYKLRTFR LWNDEAER+Q LAEK
Sbjct: 181 SYGASKQQHTFTVEVLWSRGVRKLRPLYPLLVKGRNLYKLRTFRLLWNDEAERVQALAEK 240

Query: 241 HKRGAAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRR 287
           H+RG AARG+RA+QK+KRK +Q  G  +NQG   L RQ L S   R+ M SRD NN VRR
Sbjct: 241 HRRGVAARGLRAMQKKKRKTIQTKGCAENQGHVHLARQPLKSKEKRQRMPSRDNNNVVRR 300

BLAST of CmaCh20G011310 vs. ExPASy TrEMBL
Match: A0A6J1E0C9 (zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=LOC111024763 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.5e-116
Identity = 227/298 (76.17%), Postives = 251/298 (84.23%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSE-----------DDEEESDEEYDDEDDDEGESEKEFDNECSDN 60
           M +RG+KR  + + SSS+           DDEEESDE+YD+EDDDEGESE+E+DNE SD+
Sbjct: 1   MTDRGNKRSFICISSSSDDDDDEDEVSCGDDEEESDEQYDEEDDDEGESEEEYDNEGSDD 60

Query: 61  DCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGN 120
           DCD+VLS+RVIRFLKENKNLDSLTL DCKAYLREN LRIAGTK+VCIQR++EHWRMKD N
Sbjct: 61  DCDDVLSERVIRFLKENKNLDSLTLKDCKAYLRENGLRIAGTKSVCIQRIREHWRMKDEN 120

Query: 121 GEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGA 180
           GE  YPRSSFVVNCTGDVCRGD VLFTQKVYAKFDKVTR GGLIGKRTVAGRVVKESYGA
Sbjct: 121 GEAQYPRSSFVVNCTGDVCRGDVVLFTQKVYAKFDKVTRHGGLIGKRTVAGRVVKESYGA 180

Query: 181 SKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRG 240
           +KQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFR+LWNDEAER+QVLAEKHKRG
Sbjct: 181 TKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRQLWNDEAERLQVLAEKHKRG 240

Query: 241 AAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHP 288
           AAAR +RA++ RK   LQ  G  KNQ      RQ LNS  S K M+S+ KN  +RRHP
Sbjct: 241 AAARSLRAMRTRKINFLQTEGGVKNQRHFHPARQTLNSKESSKRMQSKGKNKVLRRHP 298

BLAST of CmaCh20G011310 vs. ExPASy TrEMBL
Match: A0A1S4E1S9 (zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497448 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.5e-116
Identity = 233/306 (76.14%), Postives = 255/306 (83.33%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEE-------------SDEEYDD---------EDDDEGES 60
           M +RGSKR V+ + SSS+DDEEE             S+EE+ D         EDDDEGES
Sbjct: 30  MSKRGSKRTVICISSSSDDDEEESVEYDDEDDGVGDSEEEFHDEDDGDVNSEEDDDEGES 89

Query: 61  EKEFDNECSDNDCDE-VLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQ 120
            +EFD+E SDN CDE VLS+RVIRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQ
Sbjct: 90  GEEFDDEESDNGCDEGVLSKRVIRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQ 149

Query: 121 RLQEHWRMKDGNGEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRT 180
           R++EHWR+KDGNGEV YPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR GGLIGKRT
Sbjct: 150 RVKEHWRLKDGNGEVQYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHGGLIGKRT 209

Query: 181 VAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 240
           VAGRVVKESYGASKQQHTFTVEVLW RGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE
Sbjct: 210 VAGRVVKESYGASKQQHTFTVEVLWIRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAE 269

Query: 241 RIQVLAEKHKRGAAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSR 284
           R+QVLAEKH+RGAAAR +RA+QK+KRK++Q  G  KNQG   L RQ L S   R+ M SR
Sbjct: 270 RVQVLAEKHRRGAAARDLRAMQKKKRKIIQTKGCAKNQGHVHLARQPLKSKEKRQRMPSR 329

BLAST of CmaCh20G011310 vs. NCBI nr
Match: XP_022971662.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima])

HSP 1 Score: 555.4 bits (1430), Expect = 2.8e-154
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60
           MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI
Sbjct: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 288

BLAST of CmaCh20G011310 vs. NCBI nr
Match: XP_023512636.1 (zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.2 bits (1367), Expect = 5.6e-147
Identity = 277/289 (95.85%), Postives = 282/289 (97.58%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSS-EDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRV 60
           MPERGSKRRV+YL SSS EDDEEESDEEYDDEDDDEGESE+EFDN CSDNDCDEVLSQRV
Sbjct: 1   MPERGSKRRVIYLSSSSEEDDEEESDEEYDDEDDDEGESEEEFDNGCSDNDCDEVLSQRV 60

Query: 61  IRFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSF 120
           IRFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGE HYPRSSF
Sbjct: 61  IRFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEAHYPRSSF 120

Query: 121 VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE 180
           VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE
Sbjct: 121 VVNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVE 180

Query: 181 VLWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQ 240
           VLWS GVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQ
Sbjct: 181 VLWSTGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQ 240

Query: 241 KRKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           KRKRKL+QIGGSGKNQG  QLPRQALNSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 KRKRKLVQIGGSGKNQGHVQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289

BLAST of CmaCh20G011310 vs. NCBI nr
Match: XP_022927980.1 (zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 3.5e-141
Identity = 265/288 (92.01%), Postives = 274/288 (95.14%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60
           MPERGSKRRV+YL SSSE+DEEES       DD+EGE E+EFDNECSDNDCDE+LSQRVI
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEES-------DDEEGEWEEEFDNECSDNDCDELLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120
           RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGE HYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           RKRKL+Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKLVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

BLAST of CmaCh20G011310 vs. NCBI nr
Match: KAG6571408.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141
Identity = 264/288 (91.67%), Postives = 275/288 (95.49%), Query Frame = 0

Query: 1   MPERGSKRRVVYLYSSSEDDEEESDEEYDDEDDDEGESEKEFDNECSDNDCDEVLSQRVI 60
           MPERGSKRRV+YL SSSE+DEEES       DD+EGESE+EFDNECSDNDCDE+LSQRVI
Sbjct: 1   MPERGSKRRVIYLSSSSEEDEEES-------DDEEGESEEEFDNECSDNDCDELLSQRVI 60

Query: 61  RFLKENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFV 120
           RFLKENKNLDSLTL+DCKAYLRENRLRIAGTKAVCIQR+ EHWRMKDGNGE HYPRSSFV
Sbjct: 61  RFLKENKNLDSLTLNDCKAYLRENRLRIAGTKAVCIQRVLEHWRMKDGNGEAHYPRSSFV 120

Query: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180
           VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV
Sbjct: 121 VNCTGDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEV 180

Query: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQK 240
           LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAER+QVLAEKHKRGAAARGVRALQK
Sbjct: 181 LWSRGVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERVQVLAEKHKRGAAARGVRALQK 240

Query: 241 RKRKLLQIGGSGKNQGRAQLPRQALNSNGSRKSMRSRDKNNAVRRHPA 289
           RKRK++Q+GGSGKNQG  QLPRQA NSNGSRKSMRSRDKNNAVRRHPA
Sbjct: 241 RKRKVVQMGGSGKNQGHVQLPRQASNSNGSRKSMRSRDKNNAVRRHPA 281

BLAST of CmaCh20G011310 vs. NCBI nr
Match: XP_038902878.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119
Identity = 240/312 (76.92%), Postives = 256/312 (82.05%), Query Frame = 0

Query: 4   RGSKRRVVYLYSSSEDD-------------------EEESDEEYDDEDDD---------- 63
           + SKRRV+ + SSS+DD                   + ES+EE+DDEDDD          
Sbjct: 3   KSSKRRVICISSSSDDDISCGDDEEKSEEYDDQDDADWESEEEFDDEDDDDGDSEEEFDY 62

Query: 64  ----EGESEKEFDNECSDNDCDEVLSQRVIRFLKENKNLDSLTLHDCKAYLRENRLRIAG 123
               EGESE+EFDNE SDNDCDEVLS+RVIRFLKENKNLDSLTL+DCKAYLRENRLRIAG
Sbjct: 63  KDDVEGESEEEFDNEDSDNDCDEVLSERVIRFLKENKNLDSLTLNDCKAYLRENRLRIAG 122

Query: 124 TKAVCIQRLQEHWRMKDGNGEVHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRRG 183
           TKAVCIQR++EHWRMKDGNGE HYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTR G
Sbjct: 123 TKAVCIQRVEEHWRMKDGNGEAHYPRSSFVVNCTGDVCRGDTVLFTQKVYAKFDKVTRHG 182

Query: 184 GLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRR 243
           GLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRR
Sbjct: 183 GLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSRGVRKLPPLYPLLVKGRNLYKLRTFRR 242

Query: 244 LWNDEAERIQVLAEKHKRGAAARGVRALQKRKRKLLQIGGSGKNQGRAQLPRQALNSNGS 283
           LWNDEAER+QVLAEKHKRGAAARG+RA+QK+KRK  Q  G  KNQG   L RQ LNS  S
Sbjct: 243 LWNDEAERVQVLAEKHKRGAAARGLRAMQKKKRKFPQTRGCAKNQGHVHLARQGLNSKES 302

BLAST of CmaCh20G011310 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-62
Identity = 137/283 (48.41%), Postives = 187/283 (66.08%), Query Frame = 0

Query: 12  YLYSSSEDDEE----ESDEEYDDEDDDEGESEKEFDN---ECSDNDCDEVLSQRVIRFLK 71
           Y  +  E+DE+    E D ++  +DDD  ES+ E D    +  ++D DE    +V R L 
Sbjct: 28  YDETEEEEDEDTNSSEDDSDWSHDDDDATESDVEADEIGVKGDNDDGDE--DDKVTRLLT 87

Query: 72  ENKNLDSLTLHDCKAYLRENRLRIAGTKAVCIQRLQEHWRMKDGNGEVHYPRSSFVVNCT 131
              +L S+ + +CKAYLR++ LR++GTK VCI R+ EHWR+KDG GE  YP+SSF +NC 
Sbjct: 88  AGSDLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKDGTGEAVYPKSSFAINCK 147

Query: 132 GDVCRGDTVLFTQKVYAKFDKVTRRGGLIGKRTVAGRVVKESYGASKQQHTFTVEVLWSR 191
           GDVC+GD VLFTQKV+ K++K+ + G ++G+RTVAG+VVKESYG +KQQHTFT+EVLW  
Sbjct: 148 GDVCKGDIVLFTQKVHHKYEKMKKSGNIMGRRTVAGQVVKESYGTAKQQHTFTIEVLWCE 207

Query: 192 GVRKLPPLYPLLVKGRNLYKLRTFRRLWNDEAERIQVLAEKHKRGAAARGVRALQKRKRK 251
           G +KLPPLYPLLVKGRNLY+L T R+ W +E +R++VL EKH RGAAAR V   +K K  
Sbjct: 208 GTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHNRGAAARKVMRERKIKSG 267

Query: 252 LLQIGGSGKNQGRAQLPRQA-LNSNGSRKSMRSRDKNNAVRRH 287
            +   G  +  G  + P Q     N   +++  R + N    H
Sbjct: 268 YVLKDGRLQKPGHVKKPCQVKTRKNEKDENLTQRLRQNTPANH 308

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q338N21.5e-4139.29Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX... [more]
Match NameE-valueIdentityDescription
A0A6J1I2K81.4e-154100.00zinc finger CCCH domain-containing protein 62 isoform X1 OS=Cucurbita maxima OX=... [more]
A0A6J1EQD51.7e-14192.01zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662... [more]
A0A0A0LQ195.6e-11675.75SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G292810 PE=4 SV... [more]
A0A6J1E0C99.5e-11676.17zinc finger CCCH domain-containing protein 62 OS=Momordica charantia OX=3673 GN=... [more]
A0A1S4E1S99.5e-11676.14zinc finger CCCH domain-containing protein 62-like isoform X1 OS=Cucumis melo OX... [more]
Match NameE-valueIdentityDescription
XP_022971662.12.8e-154100.00zinc finger CCCH domain-containing protein 62 isoform X1 [Cucurbita maxima][more]
XP_023512636.15.6e-14795.85zinc finger CCCH domain-containing protein 62 [Cucurbita pepo subsp. pepo][more]
XP_022927980.13.5e-14192.01zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata][more]
KAG6571408.17.9e-14191.67Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s... [more]
XP_038902878.11.3e-11976.92zinc finger CCCH domain-containing protein 62-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G66840.11.2e-6248.41SAP domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainPFAMPF02037SAPcoord: 70..103
e-value: 2.6E-8
score: 33.4
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 66..113
e-value: 3.1E-5
score: 25.5
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 68..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..288
NoneNo IPR availablePANTHERPTHR35323:SF2SAP DOMAIN-CONTAINING PROTEINcoord: 18..277
NoneNo IPR availablePANTHERPTHR35323SAP DOMAIN-CONTAINING PROTEINcoord: 18..277

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G011310.1CmaCh20G011310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process