CmaCh20G009910 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G009910
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome c biogenesis FN
Location	Cma_Chr20: 5816914 .. 5817801 (+)
RNA-Seq Expression	CmaCh20G009910
Synteny	CmaCh20G009910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTGCAGCACCTGCATTTTGGTGTATTCTTCTTTCTTTCTTTGGTCTTTCGTTCCGTCATATTCCTAATAACTTATCCAATTACAACGTATTAACCGCGAATGCACCTTTCTTTTATCAAATCTCAGGGACATGGTCTAATCATGAGGGTAGTATTTTATCATGGTGTCGGATCCCAAGTTTTTATGGATTCCTTCTTTGTTACCGGGGTAGACCCCAAAGCCATAATGTCTCAAAACGAGGAGGCCATAGAGAAACTCTTTTTTATTCCTTTCTTTCGAACTTCGTGAAGAACCCCATTCGAGATCTCCCTCGTTACGAACATCAAAGTGGGGTTGCGCCCCTGTTGTGCACTCCCTTCGTTCTACGAACCCTTGTTGATTCTGAACTTCGTTTGCTCCAGAACCGGACTTTTGACGGGCCAGCCCTTTTTTATGCGCCGCTTTACCCTGAAAGGAAAATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTCCGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCTAGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCCGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGGGATCCCGTA

mRNA sequence

TTTGGTGCAGCACCTGCATTTTGGTGTATTCTTCTTTCTTTCTTTGGTCTTTCGTTCCGTCATATTCCTAATAACTTATCCAATTACAACGTATTAACCGCGAATGCACCTTTCTTTTATCAAATCTCAGGGACATGTGGGGTTGCGCCCCTGTTGTGCACTCCCTTCGTTCTACGAACCCTTGTTGATTCTGAACTTCGTTTGCTCCAGAACCGGACTTTTGACGGGCCAGCCCTTTTTTATGCGCCGCTTTACCCTGAAAGGAAAATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTCCGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCTAGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCCGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGGGATCCCGTA

Coding sequence (CDS)

TTTGGTGCAGCACCTGCATTTTGGTGTATTCTTCTTTCTTTCTTTGGTCTTTCGTTCCGTCATATTCCTAATAACTTATCCAATTACAACGTATTAACCGCGAATGCACCTTTCTTTTATCAAATCTCAGGGACATGTGGGGTTGCGCCCCTGTTGTGCACTCCCTTCGTTCTACGAACCCTTGTTGATTCTGAACTTCGTTTGCTCCAGAACCGGACTTTTGACGGGCCAGCCCTTTTTTATGCGCCGCTTTACCCTGAAAGGAAAATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCCCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGCGGATTGACGGAACTCTTGGCATTGCTTTGTTTTTCTCTCCTTTCCTATCAGCGAGTTCCGATCCTTTTGTTCGAAATTTCTTCGTTCGTACCGAACCGCTTGCAGAATCAAATCTAGTTCCACAAGATCCTATATCAGCTATACATCCTCCTTGCATTTATGCCGGAGACGTCGCCAGTGCTATGGGTTTTGGCTTATGTAGATCCAAAATGATGAATGGGATTGTGGCACTTCACTCGCCGCCAATGCGGAAGGATGCCCCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGGGATCCCGTA

Protein sequence

FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGTCGVAPLLCTPFVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHLARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPISAIHPPCIYAGDVASAMGFGLCRSKMMNGIVALHSPPMRKDAPEKNGTLLRSAGDPV

Homology

[Close]

BLAST of CmaCh20G009910 vs. ExPASy Swiss-Prot
Match: Q04647 (Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-100
Identity = 204/295 (69.15%), Postives = 207/295 (70.17%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT-----------CGV- 60
           FGAA AFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT           C + 
Sbjct: 29  FGAALAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSISLWCRIL 88

Query: 61  -----------------------------------------------------APLLCTP 120
                                                                AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRETLFYSFVSNFVKNPILSLPRYEQKSRAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALF--YAPLYPERKMSFAPLGSRRSRGSREGKRTHPLL 180
           FVLRT VDSELR  +NRTFDGPALF  YAPLYPERKMSFAPLG+R      EGKR   LL
Sbjct: 149 FVLRTFVDSELRSRRNRTFDGPALFYVYAPLYPERKMSFAPLGARLPVVRGEGKRMSLLL 208

Query: 181 HLARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDP 229
           HLARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDP
Sbjct: 209 HLARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDP 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy Swiss-Prot
Match: Q9T6H8 (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidopsis thaliana OX=3702 GN=CCMFN1 PE=1 SV=3)

HSP 1 Score: 338.6 bits (867), Expect = 5.6e-92
Identity = 193/293 (65.87%), Postives = 197/293 (67.24%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAA AFWCILLSF GL F HI NNLSNYNVLTANA FFYQISGT               
Sbjct: 31  FGAALAFWCILLSFLGLLFCHISNNLSNYNVLTANALFFYQISGTWSNHEGSILLWCWIL 90

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G+   L TP
Sbjct: 91  NFYGFFFCYRGRPQSHNVLKQGGYRESLFFFFVLNFVKNSILSLLRYEQESGLKNQLYTP 150

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSEL   +NRTFDGPALFYAPLYPERK+   PL + R RGSREGKRTHPLLHL
Sbjct: 151 FVLRTLVDSELCSRRNRTFDGPALFYAPLYPERKIK-NPLDAWRFRGSREGKRTHPLLHL 210

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFS FL ASSDPFVRNFFV TEPLAE N V QDPI 
Sbjct: 211 ARDDKERASSIDEQRIDGALGIALFFSFFLLASSDPFVRNFFVCTEPLAELNPVLQDPIL 270

[Close]

BLAST of CmaCh20G009910 vs. ExPASy Swiss-Prot
Match: Q04648 (Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 SV=3)

HSP 1 Score: 324.7 bits (831), Expect = 8.4e-88
Identity = 189/293 (64.51%), Postives = 193/293 (65.87%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT-----------CGV- 60
           FGAA AFWCILLSF GL F HI NN SNYNVLTANAPFFYQISGT           C + 
Sbjct: 29  FGAALAFWCILLSFLGLLFCHISNNNSNYNVLTANAPFFYQISGTWSNHEGSILLWCWIL 88

Query: 61  -----------------------------------------------------APLLCTP 120
                                                                 P L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGYRETFFYFFVLNFVKNFILSLLCYEQKTLAVPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSEL   +NRTFDGPALFYAPLYPERKMSFA LG+R      EGKRT+ LLHL
Sbjct: 149 FVLRTLVDSELCSRRNRTFDGPALFYAPLYPERKMSFAFLGARLPVVRGEGKRTYLLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFS FL ASSD FVRNFFV TEPLAE N V QDPI 
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSFFLLASSDFFVRNFFVCTEPLAELNPVLQDPIL 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy Swiss-Prot
Match: P36180 (Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=YMF4 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-27
Identity = 92/204 (45.10%), Postives = 115/204 (56.37%), Query Frame = 0


Query: 7   FWCILLSFFGLSFRHIPNNLSNYNVLT---ANAPFFYQISGTCG--VAPLLCTPFVLRTL 66
           F+   +SFFG+ F +I ++ SNYNV T   ANAP FY+ISGT       LL   ++L   
Sbjct: 60  FFLFTMSFFGILFCYISSDFSNYNVFTNSNANAPLFYKISGTWSNHEGSLLLWCWILS-- 119

Query: 67  VDSELRLLQNRTFDGPALFYAPL--YPERKMSFAPLGSRRSRGSREGKRTHPLLHLARDD 126
                             FY  L  Y  R  +     S++++G+     +        D 
Sbjct: 120 ------------------FYGFLFCYLARPCNV----SKQAKGAENKNISFLFSSKGLDQ 179

Query: 127 KERA-SSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPISAIH 186
           +ERA S IDEQ+I    GIALFFS FL ASS+PFVR  FV T+ LAE N V QDPI AIH
Sbjct: 180 RERAVSLIDEQQI--YKGIALFFSIFLLASSNPFVRISFVCTKSLAELNPVLQDPILAIH 237

Query: 187 PPCIYAGDVASAMGFGLCRSKMMN 203
           PPCIYAG VASA+GF LC SK++N
Sbjct: 240 PPCIYAGYVASAIGFCLCLSKIIN 237

[Close]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL
Match: A0A7D6BZF6 (Cytochrome c biogenesis FN OS=Luffa acutangula OX=56866 GN=ccmFn PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 219/293 (74.74%), Postives = 220/293 (75.09%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRETLFYSFLSNFVKNPIRDLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL
Match: A0A5J6NL50 (Cytochrome c biogenesis FN OS=Cercis canadensis OX=49801 GN=ccmFn PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.8e-110
Identity = 216/293 (73.72%), Postives = 218/293 (74.40%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRETFFYSFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL
Match: A0A6B9QFN5 (Cytochrome c biogenesis FN OS=Castanospermum australe OX=24962 GN=ccmFn PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.8e-110
Identity = 216/293 (73.72%), Postives = 218/293 (74.40%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRESVFYSFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL
Match: A0A7H1CQS9 (Cytochrome c biogenesis FN OS=Sapindus mukorossi OX=57655 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 215/293 (73.38%), Postives = 217/293 (74.06%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  NFYGFLLCYRGRPQSHNVSKRGGHRETFFYFFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGP LFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPTLFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL
Match: A0A6B9MVV7 (Cytochrome c biogenesis Fn OS=Xanthoceras sorbifolium OX=99658 GN=ccmFN PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 215/293 (73.38%), Postives = 217/293 (74.06%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  NLYGFLLCYRGRPQSHNVSKRGGHRESFFYFFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGP LFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPTLFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. NCBI nr
Match: YP_009913607.1 (cytochrome c biogenesis FN [Luffa acutangula] >QLJ93007.1 cytochrome c biogenesis FN [Luffa acutangula])

HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111
Identity = 219/293 (74.74%), Postives = 220/293 (75.09%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRETLFYSFLSNFVKNPIRDLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. NCBI nr
Match: QHE65814.1 (cytochrome c biogenesis FN [Castanospermum australe])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 216/293 (73.72%), Postives = 218/293 (74.40%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRESVFYSFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. NCBI nr
Match: QEX95847.1 (cytochrome c biogenesis FN [Cercis canadensis])

HSP 1 Score: 407.1 bits (1045), Expect = 9.8e-110
Identity = 216/293 (73.72%), Postives = 218/293 (74.40%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  SFYGFLLCYRGRPQSHNVSKRGGHRETFFYSFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. NCBI nr
Match: YP_009935527.1 (cytochrome c biogenesis FN [Sapindus mukorossi] >QNS26087.1 cytochrome c biogenesis FN [Sapindus mukorossi])

HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109
Identity = 215/293 (73.38%), Postives = 217/293 (74.06%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  NFYGFLLCYRGRPQSHNVSKRGGHRETFFYFFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGP LFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPTLFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. NCBI nr
Match: QHD18554.1 (cytochrome c biogenesis Fn [Xanthoceras sorbifolium])

HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109
Identity = 215/293 (73.38%), Postives = 217/293 (74.06%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSFRHIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 29  FGAAPAFWCILLSFLGLSFRHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILSWCRIP 88

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G AP L TP
Sbjct: 89  NLYGFLLCYRGRPQSHNVSKRGGHRESFFYFFVSNFVKNSILSLPRYEQKSGAAPQLYTP 148

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGP LFYAPLYPERKMSFAPLG+RRSRGSREGKRTHPLLHL
Sbjct: 149 FVLRTLVDSELRSRRNRTFDGPTLFYAPLYPERKMSFAPLGARRSRGSREGKRTHPLLHL 208

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFVRTEPLAESN VPQDPIS
Sbjct: 209 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVRTEPLAESNPVPQDPIS 268

[Close]

BLAST of CmaCh20G009910 vs. TAIR 10
Match: ATMG00830.1 (cytochrome C biogenesis 382 )

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-104
Identity = 205/293 (69.97%), Postives = 209/293 (71.33%), Query Frame = 0


Query: 1   FGAAPAFWCILLSFFGLSFRHIPNNLSNYNVLTANAPFFYQISGT--------------- 60
           FGAAPAFWCILLSF GLSF HIPNNLSNYNVLTANAPFFYQISGT               
Sbjct: 31  FGAAPAFWCILLSFLGLSFCHIPNNLSNYNVLTANAPFFYQISGTWSNHEGSILLWCRIP 90

Query: 61  --------------------------------------------------CGVAPLLCTP 120
                                                              G+   L TP
Sbjct: 91  NFYGFFLCYRGRPQSHNVLKQGGHRESLFFFFVSNFVKNSILSLPRYEQESGLKNQLYTP 150

Query: 121 FVLRTLVDSELRLLQNRTFDGPALFYAPLYPERKMSFAPLGSRRSRGSREGKRTHPLLHL 180
           FVLRTLVDSELR  +NRTFDGPALFYAPLYPERK+   PL + RSRGSREGKRTHPLLHL
Sbjct: 151 FVLRTLVDSELRSRRNRTFDGPALFYAPLYPERKIK-NPLDAWRSRGSREGKRTHPLLHL 210

Query: 181 ARDDKERASSIDEQRIDGTLGIALFFSPFLSASSDPFVRNFFVRTEPLAESNLVPQDPIS 229
           ARDDKERASSIDEQRIDG LGIALFFSPFLSASSDPFVRNFFV TEPLAESN VPQDPIS
Sbjct: 211 ARDDKERASSIDEQRIDGALGIALFFSPFLSASSDPFVRNFFVCTEPLAESNPVPQDPIS 270

The following BLAST results are available for this feature:

BLAST of CmaCh20G009910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04647	1.1e-100	69.15	Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q9T6H8	5.6e-92	65.87	Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidop...	[more]
Q04648	8.4e-88	64.51	Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 ...	[more]
P36180	3.7e-27	45.10	Probable cytochrome c biosynthesis protein OS=Marchantia polymorpha OX=3197 GN=Y...	[more]

BLAST of CmaCh20G009910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6BZF6	1.1e-111	74.74	Cytochrome c biogenesis FN OS=Luffa acutangula OX=56866 GN=ccmFn PE=3 SV=1	[more]
A0A5J6NL50	4.8e-110	73.72	Cytochrome c biogenesis FN OS=Cercis canadensis OX=49801 GN=ccmFn PE=3 SV=1	[more]
A0A6B9QFN5	4.8e-110	73.72	Cytochrome c biogenesis FN OS=Castanospermum australe OX=24962 GN=ccmFn PE=3 SV=...	[more]
A0A7H1CQS9	1.4e-109	73.38	Cytochrome c biogenesis FN OS=Sapindus mukorossi OX=57655 GN=ccmFN PE=3 SV=1	[more]
A0A6B9MVV7	1.4e-109	73.38	Cytochrome c biogenesis Fn OS=Xanthoceras sorbifolium OX=99658 GN=ccmFN PE=3 SV=...	[more]

BLAST of CmaCh20G009910 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913607.1	2.3e-111	74.74	cytochrome c biogenesis FN [Luffa acutangula] >QLJ93007.1 cytochrome c biogenesi...	[more]
QHE65814.1	9.8e-110	73.72	cytochrome c biogenesis FN [Castanospermum australe]	[more]
QEX95847.1	9.8e-110	73.72	cytochrome c biogenesis FN [Cercis canadensis]	[more]
YP_009935527.1	2.9e-109	73.38	cytochrome c biogenesis FN [Sapindus mukorossi] >QNS26087.1 cytochrome c biogene...	[more]
QHD18554.1	2.9e-109	73.38	cytochrome c biogenesis Fn [Xanthoceras sorbifolium]	[more]

BLAST of CmaCh20G009910 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00830.1	3.9e-104	69.97	cytochrome C biogenesis 382	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003567	Cytochrome c-type biogenesis protein	PRINTS	PR01410	CCBIOGENESIS	coord: 165..187 score: 54.11 coord: 137..154 score: 53.4
IPR003567	Cytochrome c-type biogenesis protein	PANTHER	PTHR43653	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	coord: 1..210
IPR003569	Probable cytochrome c biosynthesis protein, plants	PRINTS	PR01412	CCBSBIOGNSIS	coord: 136..148 score: 96.15 coord: 181..202 score: 92.05 coord: 7..19 score: 78.85 coord: 152..167 score: 90.62 coord: 19..33 score: 86.67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..231
None	No IPR available	PANTHER	PTHR43653:SF1	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	coord: 1..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G009910.1	CmaCh20G009910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015232	heme transmembrane transporter activity