CmaCh20G008600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G008600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	mediator of RNA polymerase II transcription subunit 32-like
Location	Cma_Chr20: 4139753 .. 4141537 (+)
RNA-Seq Expression	CmaCh20G008600
Synteny	CmaCh20G008600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGAACCGAATTCAAAAAGGGAATTCGGATTTGACTGTAAATCAAATCTTCTTCCTGTGATTTTTTTTTTTAATTTCAGTCTCTGTTTTCCATTTTCGTAGATTATTGTGTTCTTCGTTGATTCTGGTTTTGTTCTTCTCTTGTCTGGATTAATTCTGGCATGAACGGGTTTCTCCTGTTCAATAAACGGAAGATTTTCTTCTTAATTTGCAAGTTATCGTCCTCTACTGACTGAACAGATTTCCGGCTCTCTTAACCTTTCGTTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGAGTATCAAGACTTAGCTCATGAACAAATTATTGATTGTTGCCCTTTTTTGAATAATCATCTTAATTTGAGCCCTGCACCTCCAAATTCTGTGTATTACAAAGCTACTTTTCTACTCAAATTGTTCTTTTTTATTTACCATTTAACAAAAACATTGAATTGGTTTTGAAGCCCACAACCTAATTTATCACTCACTGAATTCAAGCTCTTGTTTATTATAGATATCAGTATTCATAGCATGATACGTTTTAGTTTTTGTTAGGAGTGCAAATACAGTCCTATTTTGGCTAAGGACGTTGGTTAGGCATGTATCTCTGTAAGTACGAGACTTTTTAGGTGAACCCAAAAGTAAATCCACGAGAGATTGTGTTCAAATAGTATCTTACTATTAGAGAAATATGCGTGAATCCATGAAAGATTAAAATAGTATCTTACCATTAGGGAAATATGCATGAATCCATGAGATATTATGTTCAACTAGTATCTTACCGTCAGAGAAATATGTGGGAATCCATGAGAGATTATGTTCAAATAGTATCTTACCATTTGAGAAATATGCGGAATATCCAATGTTCTTAAATTTTTAACGTTTGTTAGGTAAGTTATGGTAGGCTAAAGTGGAATATGGAAAGTTTAGGAAGCTTGATGTGAAAGTTCAAGAACTTGCTTGTTTTCTCTGGCTCTTGATACTCACTTTCTTGGTTGTCATGTATTTAGGTATCAGATATGGATAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTTCTGGAGCAGCCAATGTCCTTGAAGCAAATGAGGCCTCAGGGGCTCAGAAGACAGCAGCAACAGATGCGGCTCTTGAAAATTTCAAACAGAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAATTTGTGGAGTCTGTGAAGCAGAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGGCCGCCGCCACCACCACCGGCCTTCCTCCGATCAGCGCCATTCGGTTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAGTTGCAGCATGGGTCAGGAGCTGCTGCTGCTTCTGCTTCAGCACACTCCCACCCTTCTGCTCCCTTTGATGCTAGATTTACTGAGGATGCAACACAATAG

mRNA sequence

ATGATCGAACCGAATTCAAAAAGGGAATTCGGATTTGACTGTAAATCAAATCTTCTTCCTGAGTTTGTTTCTGGAGCAGCCAATGTCCTTGAAGCAAATGAGGCCTCAGGGGCTCAGAAGACAGCAGCAACAGATGCGGCTCTTGAAAATTTCAAACAGAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAATTTGTGGAGTCTGTGAAGCAGAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGGCCGCCGCCACCACCACCGGCCTTCCTCCGATCAGCGCCATTCGGTTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAGTTGCAGCATGGGTCAGGAGCTGCTGCTGCTTCTGCTTCAGCACACTCCCACCCTTCTGCTCCCTTTGATGCTAGATTTACTGAGGATGCAACACAATAG

Coding sequence (CDS)

ATGATCGAACCGAATTCAAAAAGGGAATTCGGATTTGACTGTAAATCAAATCTTCTTCCTGAGTTTGTTTCTGGAGCAGCCAATGTCCTTGAAGCAAATGAGGCCTCAGGGGCTCAGAAGACAGCAGCAACAGATGCGGCTCTTGAAAATTTCAAACAGAAATGGGAGCTATTCAGGGTTGCTTGTGATCAAGCAGAGGAATTTGTGGAGTCTGTGAAGCAGAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGGCCGCCGCCACCACCACCGGCCTTCCTCCGATCAGCGCCATTCGGTTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAGTTGCAGCATGGGTCAGGAGCTGCTGCTGCTTCTGCTTCAGCACACTCCCACCCTTCTGCTCCCTTTGATGCTAGATTTACTGAGGATGCAACACAATAG

Protein sequence

MIEPNSKREFGFDCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ

Homology

[Close]

BLAST of CmaCh20G008600 vs. ExPASy Swiss-Prot
Match: Q84VW5 (Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana OX=3702 GN=MED32 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-40
Identity = 96/149 (64.43%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +    +FV  +A VLE+ E++G QK   TD ALENFK+KWELFRVACDQAEEFVESV
Sbjct: 6   DSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATG-SLAGKSGQAAATTTG----LPPISAIRLEQMSKAVRWLVIELQH 132
           KQRIGSECLVDEATG +     GQA A  TG    LPPISA+RLEQMS+AVRWLV+ELQ 
Sbjct: 66  KQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLVLELQR 125

Query: 133 GSGAAAASASAHSHPSAPFDARFTEDATQ 157
           GSG   A  S HS  S  FD+RF+ED+TQ
Sbjct: 126 GSG--VAPGSVHS-SSTGFDSRFSEDSTQ 151

[Close]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL
Match: A0A6J1JEJ1 (mediator of RNA polymerase II transcription subunit 32-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484308 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.7e-75
Identity = 156/172 (90.70%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MIEPNSKREFGFDCKSNLLP----------------EFVSGAANVLEANEASGAQKTAAT 60
           MIEPNSKREFGFDCKSNLLP                EFVSGAANVLEANEASGAQKTAAT
Sbjct: 1   MIEPNSKREFGFDCKSNLLPVSDMDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAAT 60

Query: 61  DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP 120
           DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP
Sbjct: 61  DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP 120

Query: 121 PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ 157
           PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 121 PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ 172

[Close]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL
Match: A0A6J1JH28 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484308 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.9e-66
Identity = 138/144 (95.83%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 132
           KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 125

Query: 133 AASASAHSHPSAPFDARFTEDATQ 157
           AASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AASASAHSHPSAPFDARFTEDATQ 149

[Close]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL
Match: A0A6J1FUB1 (mediator of RNA polymerase II transcription subunit 32-like OS=Cucurbita moschata OX=3662 GN=LOC111448854 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSG-- 132
           KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISA+RLEQMSKAVRWLVIELQHGSG  
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAVRLEQMSKAVRWLVIELQHGSGAA 125

Query: 133 AAAASASAHSHPSAPFDARFTEDATQ 157
           AAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AAAASASAHSHPSAPFDARFTEDATQ 151

[Close]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL
Match: A0A5A7TWZ7 (Mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004640 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 130/144 (90.28%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFV+GAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 10  DSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 69

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 132
           KQRIGSECLVDEATGSLAGKSGQ+   TTGLPPISA+RLEQMSKAVRWLVIELQHGSG A
Sbjct: 70  KQRIGSECLVDEATGSLAGKSGQSG--TTGLPPISAVRLEQMSKAVRWLVIELQHGSG-A 129

Query: 133 AASASAHSHPSAPFDARFTEDATQ 157
           AASASAHSH SAPFDARFTEDATQ
Sbjct: 130 AASASAHSHQSAPFDARFTEDATQ 150

[Close]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL
Match: A0A0A0LIN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 130/144 (90.28%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFV+GAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 132
           KQRIGSECLVDEATGSLAGKSGQ+A  TT LPPISA+RLEQMSKAVRWLVIELQHGSG A
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQSA--TTSLPPISAVRLEQMSKAVRWLVIELQHGSG-A 125

Query: 133 AASASAHSHPSAPFDARFTEDATQ 157
           AASASAHSH SAPFDARFTEDATQ
Sbjct: 126 AASASAHSHQSAPFDARFTEDATQ 146

[Close]

BLAST of CmaCh20G008600 vs. NCBI nr
Match: XP_022986620.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 156/172 (90.70%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MIEPNSKREFGFDCKSNLLP----------------EFVSGAANVLEANEASGAQKTAAT 60
           MIEPNSKREFGFDCKSNLLP                EFVSGAANVLEANEASGAQKTAAT
Sbjct: 1   MIEPNSKREFGFDCKSNLLPVSDMDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAAT 60

Query: 61  DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP 120
           DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP
Sbjct: 61  DAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLP 120

Query: 121 PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ 157
           PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 121 PISAIRLEQMSKAVRWLVIELQHGSGAAAASASAHSHPSAPFDARFTEDATQ 172

[Close]

BLAST of CmaCh20G008600 vs. NCBI nr
Match: XP_022986622.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima] >XP_022986623.1 mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 138/144 (95.83%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 132
           KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSGAA 125

Query: 133 AASASAHSHPSAPFDARFTEDATQ 157
           AASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AASASAHSHPSAPFDARFTEDATQ 149

[Close]

BLAST of CmaCh20G008600 vs. NCBI nr
Match: XP_022944394.1 (mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata] >XP_022944395.1 mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata] >XP_022944396.1 mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata])

HSP 1 Score: 255.0 bits (650), Expect = 4.2e-64
Identity = 137/146 (93.84%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSG-- 132
           KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISA+RLEQMSKAVRWLVIELQHGSG  
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAVRLEQMSKAVRWLVIELQHGSGAA 125

Query: 133 AAAASASAHSHPSAPFDARFTEDATQ 157
           AAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AAAASASAHSHPSAPFDARFTEDATQ 151

[Close]

BLAST of CmaCh20G008600 vs. NCBI nr
Match: KAG7010941.1 (Mediator of RNA polymerase II transcription subunit 32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61
Identity = 136/150 (90.67%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQ-AAATTTGLPPISAIRLEQMSKAVRWLVIELQHGSG- 132
           KQRIGSECLVDEATGSLA KSGQ AAATTTGLPPISA+RLEQMSKAVRWLVIELQHGSG 
Sbjct: 66  KQRIGSECLVDEATGSLASKSGQAAAATTTGLPPISAVRLEQMSKAVRWLVIELQHGSGA 125

Query: 133 ----AAAASASAHSHPSAPFDARFTEDATQ 157
               AAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AAAAAAAASASAHSHPSAPFDARFTEDATQ 155

[Close]

BLAST of CmaCh20G008600 vs. NCBI nr
Match: XP_023512845.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-61
Identity = 136/151 (90.07%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +N   EFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV
Sbjct: 6   DSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATGSLAGKSGQAAAT--TTGLPPISAIRLEQMSKAVRWLVIELQHGSG 132
           KQRIGSECLVDEATGSLAGKSGQAAAT  T GLPPISA+RLEQMSKAVRWLVIELQHGSG
Sbjct: 66  KQRIGSECLVDEATGSLAGKSGQAAATAATAGLPPISAVRLEQMSKAVRWLVIELQHGSG 125

Query: 133 -----AAAASASAHSHPSAPFDARFTEDATQ 157
                AAAASASAHSHPSAPFDARFTEDATQ
Sbjct: 126 AAAAAAAAASASAHSHPSAPFDARFTEDATQ 156

[Close]

BLAST of CmaCh20G008600 vs. TAIR 10
Match: AT1G11760.1 (MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-41
Identity = 96/149 (64.43%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 13  DCKSNLLPEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESV 72
           D  +    +FV  +A VLE+ E++G QK   TD ALENFK+KWELFRVACDQAEEFVESV
Sbjct: 6   DSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEEFVESV 65

Query: 73  KQRIGSECLVDEATG-SLAGKSGQAAATTTG----LPPISAIRLEQMSKAVRWLVIELQH 132
           KQRIGSECLVDEATG +     GQA A  TG    LPPISA+RLEQMS+AVRWLV+ELQ 
Sbjct: 66  KQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLVLELQR 125

Query: 133 GSGAAAASASAHSHPSAPFDARFTEDATQ 157
           GSG   A  S HS  S  FD+RF+ED+TQ
Sbjct: 126 GSG--VAPGSVHS-SSTGFDSRFSEDSTQ 151

The following BLAST results are available for this feature:

BLAST of CmaCh20G008600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VW5	2.6e-40	64.43	Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana O...	[more]

BLAST of CmaCh20G008600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEJ1	5.7e-75	90.70	mediator of RNA polymerase II transcription subunit 32-like isoform X1 OS=Cucurb...	[more]
A0A6J1JH28	4.9e-66	95.83	mediator of RNA polymerase II transcription subunit 32-like isoform X2 OS=Cucurb...	[more]
A0A6J1FUB1	2.0e-64	93.84	mediator of RNA polymerase II transcription subunit 32-like OS=Cucurbita moschat...	[more]
A0A5A7TWZ7	1.5e-59	90.28	Mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo var. maku...	[more]
A0A0A0LIN7	2.6e-59	90.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1	[more]

BLAST of CmaCh20G008600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986620.1	1.2e-74	90.70	mediator of RNA polymerase II transcription subunit 32-like isoform X1 [Cucurbit...	[more]
XP_022986622.1	1.0e-65	95.83	mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbit...	[more]
XP_022944394.1	4.2e-64	93.84	mediator of RNA polymerase II transcription subunit 32-like [Cucurbita moschata]...	[more]
KAG7010941.1	1.2e-61	90.67	Mediator of RNA polymerase II transcription subunit 32, partial [Cucurbita argyr...	[more]
XP_023512845.1	1.2e-61	90.07	mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbit...	[more]

BLAST of CmaCh20G008600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11760.1	1.8e-41	64.43	MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0;...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..156
None	No IPR available	PANTHER	PTHR35989:SF1	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 32	coord: 20..156
IPR033244	Mediator of RNA polymerase II transcription subunit 32	PANTHER	PTHR35989	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 32	coord: 20..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G008600.1	CmaCh20G008600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0010150	leaf senescence
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048364	root development
cellular_component	GO:0016592	mediator complex