CmaCh20G006420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCTGATGCAAAGAAGAGAAGGATATGAAGTTGGTTGGCGTGTTGGTATGTTTGTTGGTGGTGGCCATGGACATCGTGGCCGGCCTGCTTGGCATCGAAGCTGATATTGCACAAAACAAGGTACTATTACTACTCATATTTTTCTCTCCATATGCAATAATGATGTATTTTTTTTGGTGCTTCCCCCTCTTTTTTCCTCCTTAGTCTATGTATGATCTCACAATTCATCGAGTTTGGAGTCTAATGTCTTCGTTCGCACTAGTTTCTTTGTAGTTTCTTTCTCCAATCAATGTGGGACCTCCTCCAAATCCACCCCTTTTAGTCCAGTGTCTTTGCTGGCACATCCCCTCATGTCCATCCCTTTAGGTCTCAGTCTCCGTTAGCACATTAACCGGTGTCTAGCTCTGATACTATTTGTAACGTTTACACCTACTAGACATTGTCATCTTTCTGCTTTTCCACTTGGGCTTTTCTTCAAGGTCTTTAATATGCTAGAGAGAGGTTTACACACTCTTTTAAAGGATGTTTCATTCTGTCTCCAATCGATGTAGTATCTGACACTATCTAATTGCTGCCATGATTGTTGAGCAGGTGAAGAACCTCCGGTTATGGATATTCGAGTGCAGAGACCCAAGCGCGCAAGCTTACAGATTGGGATTAGCAGCAGCCGGGGTTTTGGGATTAGCCCACGTAATCGCCAACCTGCTCGGCGGCTGTAACTGCATTTGCTCGCAAGAAGCGCTTGAAAAATCTCCCCCAAACAAGCAAATCTCCATCGCCTGCCTCGTTTTCACTTGGTATTTTACGCTTCTTGAAATCAAATTTCATTTAATAACTAAGAGACTGAACTGGGTTTGTTTTGGTTTTGAAAAAACAGGATAATTCTAGCGGTGGCGATGTCGATGTTGGTGATCGGAGCATTGGGGAACAACAAATCCCGAGCATCCTGTGGCTTCACACACCATCACTTCCTGTCGATTGGAGGGATTTTGTGCTTCGTCCATGGCTCGTTTAGTGTCGCTTATTACGTTACTGCCACTGCTGCTGAGTAGTGGAAATTGCTTTTGGATTTGATGTCTCATTTCTCCTCTTGTGAGGCATATCAGACAAAAACTAATGTAATCATCCTTCTTTTCTTCTCTACTAAGCATTGCCCCTATTCACAAAACTTAAAATATAAAGGACCCACAGACCGAGTATTCTACTTTCGTGTAATTTATAGAGTTCAACCAGCCATTCATATTTCACGATCAAAGATGTAGTACTGTTTGTAGTAGCAGTCCTTAATGTATCGTATCCATAATCGAAAGATGATCGAAAGAAAAAAGTCTCTCCTTGACGGAATTTCTTTCTATACTTCTGAATTTCATTGGACCCAGAAAATTATACATGGGAAGGATCGATCTGCTATTCTAATATCAACAGGTTGATTCCTTCGCTCATGTATCTTCTAGAAGGTTTCATGGATCCTGAAGAAAATAATTGGGTTCTTCCGATAACTAAAAAGTATATTATTTCATGCAAGAAAAATTCCTATTCGTATAATTAAGACACTTTCAGTGTCGTCAAATCTAGTCTGCTGCTGCTTATGATGAACTCTTGCCATCGTCGTCGTCCGAAGAACTTGAGTCCTCGCCCACCCGGCGTTCTGCAATCGCTGGAAATAGCCGCTGCTGTAGATCTGAATTCTGCTGCGACGATGTTGGAGTTTCTTTTTTGGAATTCTTCGCTTGCTTTGCCGCAGCTGCAGCTTCTTCTTCGACCTCTTGACAGGTCTTGTCTAACACAATTAGGAAATCGCGTACGATCGTGAACAATCGCAATCCTTCGTCCTTTCCAGAATTTCCATGGAAGTAATCCACCGTTCTCTTCACCAGTGCCATTATCCTCTTTTCTTCCCCTGCAATCCACGAAATGTCCGCTTCTGCTCCTTCCACAAATTTCGACACCGATTGGTGGAATTTGCTGTCTTCGTCCAAACTTTCCATCTCCGCGTTTATAAATCCTTTGGTTCTAAGCAAAGACTGGCCGAGTTTCGAGATCGTCTTCGTTAGCCCTTCCGCATCTATGGCGGCCGCTCTTTTAACGTCCTGGAGCTCCGTGCTCAAACCAGAAACGACCTGA GTCTGATGCAAAGAAGAGAAGGATATGAAGTTGGTTGGCGTGTTGGTATGTTTGTTGGTGGTGGCCATGGACATCGTGGCCGGCCTGCTTGGCATCGAAGCTGATATTGCACAAAACAAGGATAATTCTAGCGGTGGCGATGTCGATGTTGGTGATCGGAGCATTGGGGAACAACAAATCCCGAGCATCCTTGTCGTCAAATCTAGTCTGCTGCTGCTTATGATGAACTCTTGCCATCGTCGTCGTCCGAAGAACTTGAGTCCTCGCCCACCCGGCGTTCTGCAATCGCTGGAAATAGCCGCTGCTGTAGATCTGAATTCTGCTGCGACGATGTTGGAGTTTCTTTTTTGGAATTCTTCGCTTGCTTTGCCGCAGCTGCAGCTTCTTCTTCGACCTCTTGACAGTGCCATTATCCTCTTTTCTTCCCCTGCAATCCACGAAATGTCCGCTTCTGCTCCTTCCACAAATTTCGACACCGATTGGTGGAATTTGCTGTCTTCGTCCAAACTTTCCATCTCCGCGTTTATAAATCCTTTGGTTCTAAGCAAAGACTGGCCGAGTTTCGAGATCGTCTTCGTTAGCCCTTCCGCATCTATGGCGGCCGCTCTTTTAACGTCCTGGAGCTCCGTGCTCAAACCAGAAACGACCTGA ATGAAGTTGGTTGGCGTGTTGGTATGTTTGTTGGTGGTGGCCATGGACATCGTGGCCGGCCTGCTTGGCATCGAAGCTGATATTGCACAAAACAAGGATAATTCTAGCGGTGGCGATGTCGATGTTGGTGATCGGAGCATTGGGGAACAACAAATCCCGAGCATCCTTGTCGTCAAATCTAGTCTGCTGCTGCTTATGATGAACTCTTGCCATCGTCGTCGTCCGAAGAACTTGAGTCCTCGCCCACCCGGCGTTCTGCAATCGCTGGAAATAGCCGCTGCTGTAGATCTGAATTCTGCTGCGACGATGTTGGAGTTTCTTTTTTGGAATTCTTCGCTTGCTTTGCCGCAGCTGCAGCTTCTTCTTCGACCTCTTGACAGTGCCATTATCCTCTTTTCTTCCCCTGCAATCCACGAAATGTCCGCTTCTGCTCCTTCCACAAATTTCGACACCGATTGGTGGAATTTGCTGTCTTCGTCCAAACTTTCCATCTCCGCGTTTATAAATCCTTTGGTTCTAAGCAAAGACTGGCCGAGTTTCGAGATCGTCTTCGTTAGCCCTTCCGCATCTATGGCGGCCGCTCTTTTAACGTCCTGGAGCTCCGTGCTCAAACCAGAAACGACCTGA MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKDNSSGGDVDVGDRSIGEQQIPSILVVKSSLLLLMMNSCHRRRPKNLSPRPPGVLQSLEIAAAVDLNSAATMLEFLFWNSSLALPQLQLLLRPLDSAIILFSSPAIHEMSASAPSTNFDTDWWNLLSSSKLSISAFINPLVLSKDWPSFEIVFVSPSASMAAALLTSWSSVLKPETT Homology
BLAST of CmaCh20G006420 vs. ExPASy TrEMBL
Match: A0A6J1JAZ6 (uncharacterized protein LOC111484145 OS=Cucurbita maxima OX=3661 GN=LOC111484145 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. ExPASy TrEMBL
Match: A0A6J1FUW3 (uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC111449022 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. ExPASy TrEMBL
Match: A0A0A0LR43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. ExPASy TrEMBL
Match: A0A1S3C1S7 (uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. ExPASy TrEMBL
Match: A0A6J1I7N7 (uncharacterized protein LOC111469886 OS=Cucurbita maxima OX=3661 GN=LOC111469886 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.4e-04 Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of CmaCh20G006420 vs. NCBI nr
Match: KAG6570866.1 (hypothetical protein SDJN03_29781, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010715.1 hypothetical protein SDJN02_27511 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. NCBI nr
Match: XP_022944616.1 (uncharacterized protein LOC111449022 [Cucurbita moschata]) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. NCBI nr
Match: XP_022986396.1 (uncharacterized protein LOC111484145 [Cucurbita maxima]) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. NCBI nr
Match: XP_023512382.1 (uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-04 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of CmaCh20G006420 vs. NCBI nr
Match: XP_004151872.1 (uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical protein Csa_021781 [Cucumis sativus]) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-04 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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