CmaCh20G006090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G006090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DNA repair protein RAD16
Location	Cma_Chr20: 2844719 .. 2851952 (-)
RNA-Seq Expression	CmaCh20G006090
Synteny	CmaCh20G006090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAACTTCAACGCATCACATTCCCCATTTTTATTTTGTTCTCCGTACTTTGCTTTCGCTGCAGGTCGTTTTTCACTGCAAAGCTGCGCTGTCGCTTCTAGGCCTACTTCTTCGTCTTCTTCCTGCTGCTCAAGCGTGCGTCATCGTCCGAAGCGGAGAATAGAAGAGAAGAAAATCGCAGCGTTTCGTGGTTCCGATGAAGCTTCGTCCTCGTAAACCGACCTCCAATATTTTGATCCAAGGTACGGTTTCGATTTTGCGCCTCTTTATTTGTCGCATGCTGTGTATTTGTAAAGAATTGTGTTTACTGAAAACCTAATGTTCAATTGGCTAGAAAACGACGAGGTATTGCTGTAATTAGTCCATTGTGGCCTTATAGGATTTAAGATTACGTTTGGCGTATTTTTGAAATGAAGTGCTTGAGTTATTTGATAGTTCTGTGCCGGTGGAAGTTCTGTCGAGACGTTGTGAACTTCTTGAACTGGAAATAAGCGATCGTCGCCAAACAAGGAAGTACGGCGATGATTTTAACTCGATTGCGGCACGGTAGGATTTAAGATTGCGTTCAGCGTGGTTTTCAAAAAAATGTTTTGGTTTTTCTGATACTGTTGTGGCGGAGGAAGTTCTATTGAGATGTCATGCGTTTTTCGGGCTAGAAATACTCGAACTCTGCACATTCTGTGTTCTGCGTTCTTTGTTTCCTCTTCTTCCCACTGTTTTTGGGGGGAAGATCGATGAATTGTGAAATAGCTGTGTGGTTAAATTGTTATGTTATTGGAGCAGGAAACGCAGACGGTGATGCTTCTGATGATATAGACGTGTCGTCTCTTTTTTCTGACAGTGAAAGTGAAGGTATTGTGTTTTTTTGCCCTGTAGATGTTTAATTACGGTAATCCTGGTAAGAAAATATGTCTCAAGCTGGTTCAGTCTGGTGTCAAATATTTCTTTACACTTTCTCTCTCTCTCGTTTCAATGGTGTATGTGCATGTTTGTTCAGTTAAGCGAACTCTTCCCTCTAACAATCTCTTCCATAATATACTTTTGTTCACGTTACCATTGCCTACAATGCCTTAGGTTTTACTTGTTTACCTGACATGTTATTTCGTCATGAACAAAGAAAATAACTGGGAAATGGCTTTGGACGTTAAACCACGAGTTAACACTTTTAACTGGGCAGATCCTTCCTCGAGTTCTGAGGACTTTTGCGAGCCTTCAACAAAGAAGTCTAGAGCAAAGAAAAAGAGAAAAGGTATTAAAGAGGAGGGGCCTAGCATCGAGCAGGAAGTGTGGAGAAAAGTAGGTAATGATGGAAACCCACACAATCAGACACCAGAAGTTATCCCCGTCCAGGGTGTGGTTGATATAGGGAAGCCAAAGGCCAAGTACTCAAGAAAGAAAAAGCAAAAACCTATCCTTTTGTGGGATGTCTGGGCGGAAGAACATGAGAGATGGATCGATGAAAACATTGAAAAAGATTTTGATATGGCTAGTCAAAATGAAGTATTGACTGAAGCTGTTGAAACACCCTCTGCACTTACGATGCCCCTTCTGCGGTATCAGAAAGAGTGGCTAGCTTGGGCACTGAAGCAGGAAGATTCTCCAGTTAGAGGTGGGATACTTGCAGATGAAATGGGAATGGGAAAAACCATCCAAGCAATTGCCCTGGTACTTGCTAAACGTGAGTTATCTGGAGCTGGACTAAGGAGACCCTCCCCATACCCAAGTTCTTCCAAGGACTTCCCTTTGATCAAAGCAACACTTGTGGTATGTCCCGTGATTGCTGTAAGCCAGTGGGTAAGTGAGATTGATCGTTTCACATTAAAGGGAAGTAACAAGGTGCACGTGTTTCATGGTCCAAAACGAGCACAGAGTCTTGAGACTTTATTTGAATTTGATTTTGTTATTACAACATACTCTGTCGTTGAGGCTGAATACAGGAAACATTTGATGCCTCCCAAGGATAGGTGCCCTTACTGTAGTAAACTATTTTATAAGAAGAATTTGAAGATTCACTTGAAGTACATTTGTGGTCCTGATGCTGTCAAAACAGAGAAGCAGGCTAAGCAAATAAGAAAAAGGCCTATTCAGCCACAACTATCGAAAGGGGAAGTATCTGCTAAAGATAAGAACAACAATTTTCACAATAGTGGCAGCCAGAAAAGCACTTTTGGACAGACAATGGGGCAGCATGAGAATGATGAAAACCCTTGTGGGAAATCAATATTGCATTCTGTAATATGGGACCGTGTCATTTTGGATGAGGTGAGATTCTAAAACATCTGGTTTCTTTTTGTTTGTTGTTTGTATATATATATATTTTTTTTGGGGGGGTGATGCTAGACAGATTTGTTTTGTCACTGCAAATTGATGGTGAAGTAGGGATACAACGTATTCTTTTGCAGATATTCCACATCTCCAATTTCCTTGCTTCAAAGAAGAAAATAGAACGCCTAGCTAGCCGCTATCTTCTATTCCTATCCCTTTCATACCCCTTCTACATTCAAGCTAAAGTCATAATAGCTATAACAAACTCCCACAATTTCCTTATATCTTAACGTGATCATTTTGCCCTTTTCTTCTCTCTTCAAGTGTTTTGTATTTTCCTACGAGTACATAAAAATCCCATCCAGTTAGTATTCTCATATGTTTGCTATATGTTGTTTTCCATATTTCCGATCTTCGTAAGTCCCCGTGGAAACAAACTCCAAAATGGGTTAGAACAAGGGAAAAGGAAACCTACCAAAGTTTCTCATTCAACCCCAAGTGTAAAATAAAAATTATGATGCCGATTACCATTTTTGTTTGTTTCTTTTTTCCAAAAAACATTATTGCATAAATTATTATTTCCATTAGTAGTTTAGTTTGATTGGTGCTGGTTGCTGTTGAAATATAACAAAATTTTATGCAAACATAGGCGCATTTCATAAAAGATAGACAGTCTAATACTGCAAAAGCTGTTCTTGCGATTTCTTCTTCATTTAGATGGGCTTTAAGTGGCACACCTATCCAGAATCGTGTAGGGGAGCTTTACTCTCTTGTAAGTTTTTCTTTGTTTAGAACATTGTCTACCTTGAGGAAAATGATCATTCTCAATGTAATGTGTGTTTTTTGGTACACTCAGGTTCGCTTCCTGCAAATTGTGCCTTATTCTTTCTACTTCTGTAAGGACTGTGATTGTAGAACACTCGACCACAGGTACTAGTTTAGATTTGATATGGTTCTGCAATCTTGGTAAATTTTCATTTGATCTTTTTATCAGCTTCCTTGTTTTTTGGACTCATTAATTTTCTTATATGATGTAACGTTTGACCCTTATGGGAAATTTCAGTTCTGTTAGCTGTCCTGACTGCCCTCATAAACGCATGCGGCATTTTTGCTGGTGGAACAAGGTAAGTTCTGTAATGTGTGGCATTTCAATATCTCTGTAACATTGTTAAACTATGTTCTTTATTATTATGGTTTGGTTTGGAAGTATATTACGCTACGGATTCAAAATGTTGGGAGAGGTCCTGAGTTTAAAAGAGGTATGATATTGCTGAAGCATAAAATTTTAAGTAGCATCGTACTACGACGCACCAAAAAGGGTAGAGCTGCTGATCTTGCTCTTCCTCCTAGTATTGTAAGTGGACATACATATGTTTGTTACTTGTTCGTATTGATGAGCAAACTAATTTTAGTTCTGCTCAATCTTCCCATAGGTTTCAATTAGGCGAGATACCCTTGACATTCAAGAAGAAGATTTTTATGAATCATTGTATAATGATAGTCGAGCAAAATTTAATACGTGAGTGACCATCTATATCTACTGATTCTTTTTGAGCCTGTTTGTTAAAGTATCTTTGATCCATATTATGATTAAAGTCCCTTTAGTGCATATGATGCAAGTAATTACAAATGTGGAGACTAATTTGGAAAATGTTTTATTAGTGTCTTAGGTCTTCTAGATTTGGAACTTAATTTAAAGATAATAATATAGAAAATGGTTACTTTTGAAGCTGAGACTATTCTCCAAGTCTTTACTATCAGTTTATTTTGTACCAGGTTAAATTTTTATGCATCTTTTTGCGTTTCAATATTTAGTAATTTGTCTCTTTTGAGTTGTACTCTTTTGTCTTGATTGAATTTGATTTTATTTTTCGTTAGATAGCTATTGTTGAACATACTTTTGTGGGTGCATATGGAATGGCTGATTATTTTTTGGAAGAAAAATTTTATTGTACTGTGAAAAAAAAATCAGTTGATGTGAATTAACTCGAGTGAGTATTGTAGTGTTATAGTACTGCTACCAACTTCTTATTATTCCCCTTTTTTTTTTAATGTTTGTTTTCTACTATGAATGCATATTCAATGTTCATAAAAATGTTGATTATTCAGAAAGCTATTCTCTGAAGCAGCACTTGAATTGAGAAAGAAGCGAGTATGAACATATCAGTTTAGAATTGGTTTTACAAAACACGCATATTAGTTGTTTGATGCAATTTTTTCTTTGTAGTTTCGTGGCAGCAGGAACAGCAACGAGTAATTATGCACACATATTTGACCTTTTGATTCGCTTGAGACAGGTCTGTTGTGGCTTCTGGTCAGGCTTAGAAATCTATGTCGATAGTTCTTAAGTCTTCAGAGTTAAGAACTTTATGATAATCTAATTTCTTGTTGATTTTTCTTTGAGCATTAGATTTGCAAGTTCAAAATGTAAATTAGGTTATCCATGTCTACTGTATGGGCTGAAAATATTTAAAGGGAATTTCTTTGAGAAATATGTTTTTTTGGATAAGACCTTTGAGATATATTTTAGTTTCAACGATATATTGGAGACGGCATCTTAACAAAACTCAAATAAAATGATTAAAGAACTTACTACTATTATTTTGAGTAGATGTATTTTATCGTATTAACCTCAATTAACAAGAACTTCTTTATCCAATAGCTTTGTTCCACAAAACATGCGAAAGTCTATCTGCTAATGAAATTTAATTCATTTTTCTCATGATTTTACAGGCAGTTAATCATCCATATCTCGTTGTATATTCTAGAACTAATGTCATAAGTTGTGGAAGCATTGATGGTACTGATAATAATAACGAACATGCATGTGGAATTTGTCATGAGCCAGCTGAAGAACCTGTGGTGAGTTTCTGGTGAATCCCCACTCTCCCTTCCTTTCCTTTTATCCTTGTTTTCGCAGTTTGATAATTTAAATTTTCATCGAATGTTTTTGCATTCAATTGTTCATCTTTTGTGAATATTGGTGCTAGCTAATGTCAATTAATCTATTGAAGTACTGTAGTGTGCGAATCTATTTATGATCACTCATGAGTGACTGTTGTTGACGGGTTTCTTTTCATAGCAGTGAAAATCCATGAGAACGTTGCTGAAAACGAACATCCTGTATTTGATCACTACCTTGTGTTGCCCCTTAAAATCAAATGAAATAATGCATAGGAAATAAAAAACTCAGAGCAGTAAATGATTTAATAACCACCATTCTTTTTTCACTACATTACCTATTTAGTTGAAATGGAACTGAAGAGTCGAATTACTGCCTCTTTAATAATCTCTTCTATTTTAACAGGTTACCTCTTGCGAGCACACATTTTGTAAGGCCTGCATTATTGGTTTTGCCAATGATTTTTCGAAGCTTGTCTCATGTCCTTCTTGCTCAAAGAAGCTCACCATTGACTTTAGCACAAATCTGGCTGGTAGAGATCAAACCATTAAAAATACAATTAAGGGGTTTAAATGTACAAGTATCCTTAACAGAATACAACTGGAGAATTTTCAGACGAGCACAAAAATAGAAGCTTTGGTACGTTTTATTCAAACTCCCTGTATGTTTTAATCCCTCGATGCGAATGAAGAAAAGAGCATGTTTTATTTATTTGGTCACGCTTTGACTTTTTTTTTTTTTTTTTTACTCTAGAGAGAAGAAATCAGGTTCATGTTAGAACGAGATGGATCTGCCAAAGGAATCGTTTTTAGCCAATTCACGTCATTTTTGGATCTAATAAACTATTCCTTAACAAAGGTGAGTTGTAGTAAGCATGTAGAGTCTTCTTATAGCCAAAGAAAATTAGTCGTTTTATATCATGCAATGAACCCTTTGCAGTCTGGTATTACCTGCGTTCAACTAATTGGAAGCATGTCCTTGCCACAAAGAGATGATGCTATTAAGAGATTCATTGACGATCCAGATTGCAAGATTTTTCTAATGAGCTTAAAAGCTGGAGGGATTGCTCTCAATCTCACTGTGGCATCGCATGTAAGGAGTCACTTTCGATTGACTATGCAATTTAATTATTCACATGTCATGACCTTATTATGTTGCATATATGCTGCTATCACACTGTTTATACAATATGTTTTTGCTCATAAAATTAATTGTTCATTTTCGGTGACGAATACGCCCTATTTTCCTTCTTTGATCTTCACTTTAGGTGTTCATCATGGACCCTTGGTGGAATCCTGCTGTGGAACGACAAGCACAAGACAGAATCCACCGAATTGGACAATATAAGCCTATCAGGTGCAGTGTTTTGATAAAATAAAAAAATATTTGGTAATTTTCTGCCATTGCCTGAAGGCAGCACTAACATGCATTTGACATTAACAGAATTACGAGATTCGTTATTGAAAACTCTATTGAGGAGAGGATTTTGAAGCTGCAAGAGAGAAAAGAACTGGTATTTGAAGGGTACGTGCTCTGCCCTTTAATCTTACAAAAAAAAAAAAAAAGAAAAAAAAAAAATCACTATGTCTCTCTTTGCAGAACTGTAGGTCGCTCTAACGAGGCCTTGGGAAAATTAACCTTGGACGACATGAGATTTCTGTTTATTTGACCAAGTTCACGAAAGAAAAAAAAAAAAAAACAAAAACTAATACCTGCGCGCGCACAAAAGAGAACAGAGCCAAGGTTATGTACATGTACATGCACACACTCACACCCCTTTTGTACATCTAATTCCAAATTTTGATTGTGTAAATGCTTCTGGTCATATTTTGCTTGAGGAGCATATACATTTTGATTTACGGGAGGTTTGTTAAGTTGGTTGTCTCCATATTTTGTGGTTTGCGAAGGAGCAGACCAGATGTCGAGGAAAAGTCAAAACGTTGAAACATTAGTTCAATGATATGCTTCGACTTTACCCGTAAGTCTCTCTCTCTCATTCACACATAAAAGGAAGGAAGGAAAAGATCATAGGTTCTCCAATGCCTGGAGATTCATTTAACAGATGCT

mRNA sequence

TTCAACTTCAACGCATCACATTCCCCATTTTTATTTTGTTCTCCGTACTTTGCTTTCGCTGCAGGTCGTTTTTCACTGCAAAGCTGCGCTGTCGCTTCTAGGCCTACTTCTTCGTCTTCTTCCTGCTGCTCAAGCGTGCGTCATCGTCCGAAGCGGAGAATAGAAGAGAAGAAAATCGCAGCGTTTCGTGGTTCCGATGAAGCTTCGTCCTCGTAAACCGACCTCCAATATTTTGATCCAAGGAAACGCAGACGGTGATGCTTCTGATGATATAGACGTGTCGTCTCTTTTTTCTGACAGTGAAAGTGAAGATCCTTCCTCGAGTTCTGAGGACTTTTGCGAGCCTTCAACAAAGAAGTCTAGAGCAAAGAAAAAGAGAAAAGGTATTAAAGAGGAGGGGCCTAGCATCGAGCAGGAAGTGTGGAGAAAAGTAGGTAATGATGGAAACCCACACAATCAGACACCAGAAGTTATCCCCGTCCAGGGTGTGGTTGATATAGGGAAGCCAAAGGCCAAGTACTCAAGAAAGAAAAAGCAAAAACCTATCCTTTTGTGGGATGTCTGGGCGGAAGAACATGAGAGATGGATCGATGAAAACATTGAAAAAGATTTTGATATGGCTAGTCAAAATGAAGTATTGACTGAAGCTGTTGAAACACCCTCTGCACTTACGATGCCCCTTCTGCGGTATCAGAAAGAGTGGCTAGCTTGGGCACTGAAGCAGGAAGATTCTCCAGTTAGAGGTGGGATACTTGCAGATGAAATGGGAATGGGAAAAACCATCCAAGCAATTGCCCTGGTACTTGCTAAACGTGAGTTATCTGGAGCTGGACTAAGGAGACCCTCCCCATACCCAAGTTCTTCCAAGGACTTCCCTTTGATCAAAGCAACACTTGTGGTATGTCCCGTGATTGCTGTAAGCCAGTGGGTAAGTGAGATTGATCGTTTCACATTAAAGGGAAGTAACAAGGTGCACGTGTTTCATGGTCCAAAACGAGCACAGAGTCTTGAGACTTTATTTGAATTTGATTTTGTTATTACAACATACTCTGTCGTTGAGGCTGAATACAGGAAACATTTGATGCCTCCCAAGGATAGGTGCCCTTACTGTAGTAAACTATTTTATAAGAAGAATTTGAAGATTCACTTGAAGTACATTTGTGGTCCTGATGCTGTCAAAACAGAGAAGCAGGCTAAGCAAATAAGAAAAAGGCCTATTCAGCCACAACTATCGAAAGGGGAAGTATCTGCTAAAGATAAGAACAACAATTTTCACAATAGTGGCAGCCAGAAAAGCACTTTTGGACAGACAATGGGGCAGCATGAGAATGATGAAAACCCTTGTGGGAAATCAATATTGCATTCTGTAATATGGGACCGTGTCATTTTGGATGAGGCGCATTTCATAAAAGATAGACAGTCTAATACTGCAAAAGCTGTTCTTGCGATTTCTTCTTCATTTAGATGGGCTTTAAGTGGCACACCTATCCAGAATCGTGTAGGGGAGCTTTACTCTCTTGTTCGCTTCCTGCAAATTGTGCCTTATTCTTTCTACTTCTGTAAGGACTGTGATTGTAGAACACTCGACCACAGTTCTGTTAGCTGTCCTGACTGCCCTCATAAACGCATGCGGCATTTTTGCTGGTGGAACAAGTATATTACGCTACGGATTCAAAATGTTGGGAGAGGTCCTGAGTTTAAAAGAGGTATGATATTGCTGAAGCATAAAATTTTAAGTAGCATCGTACTACGACGCACCAAAAAGGGTAGAGCTGCTGATCTTGCTCTTCCTCCTAGTATTGTTTCAATTAGGCGAGATACCCTTGACATTCAAGAAGAAGATTTTTATGAATCATTGTATAATGATAGTCGAGCAAAATTTAATACTTTCGTGGCAGCAGGAACAGCAACGAGTAATTATGCACACATATTTGACCTTTTGATTCGCTTGAGACAGGCAGTTAATCATCCATATCTCGTTGTATATTCTAGAACTAATGTCATAAGTTGTGGAAGCATTGATGGTACTGATAATAATAACGAACATGCATGTGGAATTTGTCATGAGCCAGCTGAAGAACCTGTGGTTACCTCTTGCGAGCACACATTTTGTAAGGCCTGCATTATTGGTTTTGCCAATGATTTTTCGAAGCTTGTCTCATGTCCTTCTTGCTCAAAGAAGCTCACCATTGACTTTAGCACAAATCTGGCTGGTAGAGATCAAACCATTAAAAATACAATTAAGGGGTTTAAATGTACAAGTATCCTTAACAGAATACAACTGGAGAATTTTCAGACGAGCACAAAAATAGAAGCTTTGAGAGAAGAAATCAGGTTCATGTTAGAACGAGATGGATCTGCCAAAGGAATCGTTTTTAGCCAATTCACGTCATTTTTGGATCTAATAAACTATTCCTTAACAAAGTCTGGTATTACCTGCGTTCAACTAATTGGAAGCATGTCCTTGCCACAAAGAGATGATGCTATTAAGAGATTCATTGACGATCCAGATTGCAAGATTTTTCTAATGAGCTTAAAAGCTGGAGGGATTGCTCTCAATCTCACTGTGGCATCGCATGTGTTCATCATGGACCCTTGGTGGAATCCTGCTGTGGAACGACAAGCACAAGACAGAATCCACCGAATTGGACAATATAAGCCTATCAGAATTACGAGATTCGTTATTGAAAACTCTATTGAGGAGAGGATTTTGAAGCTGCAAGAGAGAAAAGAACTGGTATTTGAAGGAACTGTAGGTCGCTCTAACGAGGCCTTGGGAAAATTAACCTTGGACGACATGAGATTTCTGTTTATTTGACCAAGTTCACGAAAGAAAAAAAAAAAAAAACAAAAACTAATACCTGCGCGCGCACAAAAGAGAACAGAGCCAAGGTTATGTACATGTACATGCACACACTCACACCCCTTTTGTACATCTAATTCCAAATTTTGATTGTGTAAATGCTTCTGGTCATATTTTGCTTGAGGAGCATATACATTTTGATTTACGGGAGGTTTGTTAAGTTGGTTGTCTCCATATTTTGTGGTTTGCGAAGGAGCAGACCAGATGTCGAGGAAAAGTCAAAACGTTGAAACATTAGTTCAATGATATGCTTCGACTTTACCCGTAAGTCTCTCTCTCTCATTCACACATAAAAGGAAGGAAGGAAAAGATCATAGGTTCTCCAATGCCTGGAGATTCATTTAACAGATGCT

Coding sequence (CDS)

ATGAAGCTTCGTCCTCGTAAACCGACCTCCAATATTTTGATCCAAGGAAACGCAGACGGTGATGCTTCTGATGATATAGACGTGTCGTCTCTTTTTTCTGACAGTGAAAGTGAAGATCCTTCCTCGAGTTCTGAGGACTTTTGCGAGCCTTCAACAAAGAAGTCTAGAGCAAAGAAAAAGAGAAAAGGTATTAAAGAGGAGGGGCCTAGCATCGAGCAGGAAGTGTGGAGAAAAGTAGGTAATGATGGAAACCCACACAATCAGACACCAGAAGTTATCCCCGTCCAGGGTGTGGTTGATATAGGGAAGCCAAAGGCCAAGTACTCAAGAAAGAAAAAGCAAAAACCTATCCTTTTGTGGGATGTCTGGGCGGAAGAACATGAGAGATGGATCGATGAAAACATTGAAAAAGATTTTGATATGGCTAGTCAAAATGAAGTATTGACTGAAGCTGTTGAAACACCCTCTGCACTTACGATGCCCCTTCTGCGGTATCAGAAAGAGTGGCTAGCTTGGGCACTGAAGCAGGAAGATTCTCCAGTTAGAGGTGGGATACTTGCAGATGAAATGGGAATGGGAAAAACCATCCAAGCAATTGCCCTGGTACTTGCTAAACGTGAGTTATCTGGAGCTGGACTAAGGAGACCCTCCCCATACCCAAGTTCTTCCAAGGACTTCCCTTTGATCAAAGCAACACTTGTGGTATGTCCCGTGATTGCTGTAAGCCAGTGGGTAAGTGAGATTGATCGTTTCACATTAAAGGGAAGTAACAAGGTGCACGTGTTTCATGGTCCAAAACGAGCACAGAGTCTTGAGACTTTATTTGAATTTGATTTTGTTATTACAACATACTCTGTCGTTGAGGCTGAATACAGGAAACATTTGATGCCTCCCAAGGATAGGTGCCCTTACTGTAGTAAACTATTTTATAAGAAGAATTTGAAGATTCACTTGAAGTACATTTGTGGTCCTGATGCTGTCAAAACAGAGAAGCAGGCTAAGCAAATAAGAAAAAGGCCTATTCAGCCACAACTATCGAAAGGGGAAGTATCTGCTAAAGATAAGAACAACAATTTTCACAATAGTGGCAGCCAGAAAAGCACTTTTGGACAGACAATGGGGCAGCATGAGAATGATGAAAACCCTTGTGGGAAATCAATATTGCATTCTGTAATATGGGACCGTGTCATTTTGGATGAGGCGCATTTCATAAAAGATAGACAGTCTAATACTGCAAAAGCTGTTCTTGCGATTTCTTCTTCATTTAGATGGGCTTTAAGTGGCACACCTATCCAGAATCGTGTAGGGGAGCTTTACTCTCTTGTTCGCTTCCTGCAAATTGTGCCTTATTCTTTCTACTTCTGTAAGGACTGTGATTGTAGAACACTCGACCACAGTTCTGTTAGCTGTCCTGACTGCCCTCATAAACGCATGCGGCATTTTTGCTGGTGGAACAAGTATATTACGCTACGGATTCAAAATGTTGGGAGAGGTCCTGAGTTTAAAAGAGGTATGATATTGCTGAAGCATAAAATTTTAAGTAGCATCGTACTACGACGCACCAAAAAGGGTAGAGCTGCTGATCTTGCTCTTCCTCCTAGTATTGTTTCAATTAGGCGAGATACCCTTGACATTCAAGAAGAAGATTTTTATGAATCATTGTATAATGATAGTCGAGCAAAATTTAATACTTTCGTGGCAGCAGGAACAGCAACGAGTAATTATGCACACATATTTGACCTTTTGATTCGCTTGAGACAGGCAGTTAATCATCCATATCTCGTTGTATATTCTAGAACTAATGTCATAAGTTGTGGAAGCATTGATGGTACTGATAATAATAACGAACATGCATGTGGAATTTGTCATGAGCCAGCTGAAGAACCTGTGGTTACCTCTTGCGAGCACACATTTTGTAAGGCCTGCATTATTGGTTTTGCCAATGATTTTTCGAAGCTTGTCTCATGTCCTTCTTGCTCAAAGAAGCTCACCATTGACTTTAGCACAAATCTGGCTGGTAGAGATCAAACCATTAAAAATACAATTAAGGGGTTTAAATGTACAAGTATCCTTAACAGAATACAACTGGAGAATTTTCAGACGAGCACAAAAATAGAAGCTTTGAGAGAAGAAATCAGGTTCATGTTAGAACGAGATGGATCTGCCAAAGGAATCGTTTTTAGCCAATTCACGTCATTTTTGGATCTAATAAACTATTCCTTAACAAAGTCTGGTATTACCTGCGTTCAACTAATTGGAAGCATGTCCTTGCCACAAAGAGATGATGCTATTAAGAGATTCATTGACGATCCAGATTGCAAGATTTTTCTAATGAGCTTAAAAGCTGGAGGGATTGCTCTCAATCTCACTGTGGCATCGCATGTGTTCATCATGGACCCTTGGTGGAATCCTGCTGTGGAACGACAAGCACAAGACAGAATCCACCGAATTGGACAATATAAGCCTATCAGAATTACGAGATTCGTTATTGAAAACTCTATTGAGGAGAGGATTTTGAAGCTGCAAGAGAGAAAAGAACTGGTATTTGAAGGAACTGTAGGTCGCTCTAACGAGGCCTTGGGAAAATTAACCTTGGACGACATGAGATTTCTGTTTATTTGA

Protein sequence

MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKKRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQERKELVFEGTVGRSNEALGKLTLDDMRFLFI

Homology

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BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot
Match: P79051 (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp16 PE=3 SV=2)

HSP 1 Score: 500.4 bits (1287), Expect = 4.2e-140
Identity = 294/748 (39.30%), Postives = 421/748 (56.28%), Query Frame = 0


Query: 133 ENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILADEMGM 192
           E++ +  +  +  EV  + +E P  L + LL +Q+E + W  +QEDS   GGILADEMGM
Sbjct: 228 EHVWEKLEEEAPREV--KQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGM 287

Query: 193 GKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFT 252
           GKTIQ IAL+L++                     P  K TLVV PV+A+ QW  EID  T
Sbjct: 288 GKTIQTIALLLSE---------------------PRGKPTLVVAPVVAIMQWKEEIDTHT 347

Query: 253 LKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKK 312
            K  +  ++++G  R  S E L  +D V+T+Y+V+E+ YRK                   
Sbjct: 348 NKALS-TYLYYGQARDISGEELSSYDVVLTSYNVIESVYRK------------------- 407

Query: 313 NLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQT 372
                                                               ++S F + 
Sbjct: 408 ----------------------------------------------------ERSGFRRK 467

Query: 373 MGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQ 432
            G  +       KS+LH + + R+ILDEAH IK R  NTA+AV  + ++ +  LSGTP+Q
Sbjct: 468 NGVVKE------KSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQ 527

Query: 433 NRVGELYSLVRFLQIVPYSFYFCKDCDCRTLD---HSSVSCPDCPHKRMRHFCWWNKYIT 492
           NR+GEL+SL+RFL+  P+++Y+C  C+C++L        +C +C HK M H C++N  + 
Sbjct: 528 NRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEML 587

Query: 493 LRIQNVG-RGPEFKRGMILLK--HKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQ 552
             IQ  G  GP    G +  K  H +L  I+LRRTK  RA DL LPP +V +R+D  + +
Sbjct: 588 KPIQKFGYEGP----GKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEE 647

Query: 553 EEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCG 612
           EED Y+SLY DS+ KFNT++A G   +NYA+IF L+ R+RQ  +HP LV+ S+   +   
Sbjct: 648 EEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLASKRKTVD-- 707

Query: 613 SIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFAN--DFSKLVSCPSCSKKLT 672
                +N     C IC E A++ + + C HTFC+ C+  + N     + V+CPSC   L+
Sbjct: 708 ----IENQENIVCKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLS 767

Query: 673 IDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKG 732
           ID S          K     FK  SILNRI + ++++STKIEAL EE+  + ++D + K 
Sbjct: 768 IDLSAPALEDFSEEK-----FKNASILNRIDMNSWRSSTKIEALVEELYLLRKKDRTLKS 827

Query: 733 IVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGG 792
           IVFSQFTS LDLI++ L K+G  CV+L G M+   R   I+ F +D +  IFL+SLKAGG
Sbjct: 828 IVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKAGG 859

Query: 793 IALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQER 852
           +ALNLT AS VF+MDPWWN AV+ QA DRIHRIGQ +PI++    IENSIE +I++LQE+
Sbjct: 888 VALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQEK 859

Query: 853 KELVFEGTVGRSNEALGKLTLDDMRFLF 873
           K  +   T+ +  +AL +L+++DM+FLF
Sbjct: 948 KAQMIHATIDQDEKALNQLSVEDMQFLF 859

[Close]

BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot
Match: P31244 (DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD16 PE=1 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 4.8e-136
Identity = 318/882 (36.05%), Postives = 473/882 (53.63%), Query Frame = 0


Query: 7   KPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPST----KKSRAKKKRK 66
           K +  + ++GN++ + +D  D       +  + P    +DF    T    +++   +   
Sbjct: 32  KNSKTLQLKGNSE-NVNDSQDEEYRDDATLVKSPDDDDKDFIIDLTGSDKERTATDENTH 91

Query: 67  GIKEEGPS-IEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLWD 126
            IK +    IE +  R V +D  P       +  +      K K K S KKK   +  ++
Sbjct: 92  AIKNDNDEIIEIKEERDVSDDDEP-------LTKKRKTTARKKKKKTSTKKKSPKVTPYE 151

Query: 127 ---VWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 186
              +   EH   +  N+  D   A     + +  + P  +T+ LL +Q E L W + QE+
Sbjct: 152 RNTLRLYEHHPEL-RNVFTDLKNAP--PYVPQRSKQPDGMTIKLLPFQLEGLHWLISQEE 211

Query: 187 SPVRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPV 246
           S   GG+LADEMGMGKTIQ IAL++   +L+    + PS               LVV P 
Sbjct: 212 SIYAGGVLADEMGMGKTIQTIALLM--NDLT----KSPS---------------LVVAPT 271

Query: 247 IAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPP 306
           +A+ QW +EI++ T KG  K++++HG  R   ++ L  +D V+TTY+V+E+ +RK     
Sbjct: 272 VALMQWKNEIEQHT-KGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVFRKQ---- 331

Query: 307 KDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNN 366
                  +  F +KN                      + K+P                  
Sbjct: 332 -------NYGFRRKN---------------------GLFKQP------------------ 391

Query: 367 FHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAI 426
                                      S+LH++ + RVILDEAH IKDRQSNTA+AV  +
Sbjct: 392 ---------------------------SVLHNIDFYRVILDEAHNIKDRQSNTARAVNNL 451

Query: 427 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLD---HSSVSCPDCPH 486
            +  RW LSGTP+QNR+GE+YSL+RFL I P++ YFC  CDC + D      + C  C H
Sbjct: 452 KTQKRWCLSGTPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSH 511

Query: 487 KRMRHFCWWNKYITLRIQNVG-RGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPS 546
             M+H  ++N ++   IQ  G  GP  +    +    +L +I+LRRTK  RA DL LPP 
Sbjct: 512 VIMQHTNFFNHFMLKNIQKFGVEGPGLESFNNI--QTLLKNIMLRRTKVERADDLGLPPR 571

Query: 547 IVSIRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYL 606
           IV++RRD  + +E+D Y SLY DS+ K+N+FV  G   +NYA+IF L+ R+RQ  +HP L
Sbjct: 572 IVTVRRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDL 631

Query: 607 VVYSRTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDF---S 666
           V+    N          D+     C +C++ AEEP+ + C H FC+ CI  +   F   +
Sbjct: 632 VLKRLNNFPG-------DDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENN 691

Query: 667 KLVSCPSCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLE-NFQTSTKIEALRE 726
             ++CP C   L+ID S         ++  +  FK  SI++R+ +   +Q+STKIEAL E
Sbjct: 692 NKLTCPVCHIGLSIDLS------QPALEVDLDSFKKQSIVSRLNMSGKWQSSTKIEALVE 751

Query: 727 EIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDD 786
           E+  +     + K IVFSQFTS LDL+ + L ++G   V+L GSMS  QRD+ IK F+++
Sbjct: 752 ELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNN 788

Query: 787 PDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVI 846
             C++FL+SLKAGG+ALNL  AS VFI+DPWWNP+VE Q+ DR+HRIGQY+P++ITRF I
Sbjct: 812 IQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCI 788

Query: 847 ENSIEERILKLQERKELVFEGTVGRSNEALGKLTLDDMRFLF 873
           E+SIE RI++LQE+K  +   T+ +   A+ +LT  D++FLF
Sbjct: 872 EDSIEARIIELQEKKANMIHATINQDEAAISRLTPADLQFLF 788

[Close]

BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot
Match: Q9LHE4 (Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana OX=3702 GN=CHR27 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 8.4e-88
Identity = 256/873 (29.32%), Postives = 386/873 (44.22%), Query Frame = 0


Query: 132  DENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVR--GGILADE 191
            DE +     +   N+ +TE+   P  L++PL+R+QK  LAW  ++E S     GGILAD+
Sbjct: 251  DERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPGGILADD 310

Query: 192  MGMGKTIQAIALVLAKRELS-----------------------------GAGLRRPSPYP 251
             G+GKT+  IAL+L ++ +S                                  +P    
Sbjct: 311  QGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNAKHESGSHVKPELKV 370

Query: 252  SSSKDFPLIKA----------------------------------TLVVCPVIAVSQWVS 311
            SS+ +  ++ A                                  TL+VCP   V QW  
Sbjct: 371  SSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPAAGTLIVCPASVVRQWAR 430

Query: 312  EIDRFTLKGSN-KVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYC 371
            E+D    + S   V V+HG  R +    L E+D V+TTY++V  E     +  +D     
Sbjct: 431  ELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNEAPNKFLVDEDEND-- 490

Query: 372  SKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQ 431
                 +KN           D           +KR +    SK       K+ N  +S   
Sbjct: 491  -----EKN----------TDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSS--- 550

Query: 432  KSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWA 491
                       E D  P GK     V W R++LDEA  IK+ ++  A++   + +  RW 
Sbjct: 551  -----------EPDCGPLGK-----VGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWC 610

Query: 492  LSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWN 551
            LSGTPIQN + +LYS  RFL+  PY+ Y           +S++  P       R+ C   
Sbjct: 611  LSGTPIQNTIDDLYSYFRFLRYDPYAVY--------KSFYSTIKVP-----ISRNSCQGY 670

Query: 552  KYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAAD----LALPPSIVSIRRD 611
            K +                       +L +I+LRRT KG   D    + LPP +V++ + 
Sbjct: 671  KKL---------------------QAVLRAIMLRRT-KGTLLDGKPIINLPPKVVNLSQV 730

Query: 612  TLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTN 671
               + E  FY+ L  DSR++F  +  AGT + NYA+I  LL+RLRQA +HP LV   R N
Sbjct: 731  DFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV--KRYN 790

Query: 672  VISCGSIDGTD----------------NNNEHACGICHEPAEEPVVTSCEHTFCKACIIG 731
                G +                     ++   C  C+EP E+PVVT C H FC  C++ 
Sbjct: 791  SDPVGKVSEAAVRRLPREARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLE 850

Query: 732  FANDFSKLVSCPSCSKKLTIDFSTNLAGRDQTIKN-TIKGFKCTSIL-NRIQLENFQ--- 791
            +          P C ++L  D    +   + +++N T     C+S   N +    FQ   
Sbjct: 851  YITGDENTCPVPRCKQQLARD----VVFSESSLRNCTSDDSGCSSSHDNGLDRSVFQKRD 910

Query: 792  -TSTKIEALREEIRFMLERD-------------------------------------GSA 851
              S+KI+A+ + ++ + + D                                     G+ 
Sbjct: 911  FCSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAV 970

Query: 852  KGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKA 874
            K I+FSQ+T  LDL+   + +SGI   +L G+MSL  RD A+K F   PD K+ LMSLKA
Sbjct: 971  KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 1030

[Close]

BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot
Match: Q94BR5 (Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana OX=3702 GN=CHR28 PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.4e-87
Identity = 255/867 (29.41%), Postives = 383/867 (44.18%), Query Frame = 0


Query: 125 EEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVR-- 184
           EE     DE +     +   N+  +E       L++PL+++QK  LAW  ++E + +   
Sbjct: 189 EERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSLHCM 248

Query: 185 GGILADEMGMGKTIQAIALVL-----AKRELSGAG------------------LRRPSPY 244
           GGILAD+ G+GKT+  IAL+L     AK +   +G                    +P   
Sbjct: 249 GGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKPESK 308

Query: 245 PSSSK----DFPLIKA--------------------TLVVCPVIAVSQWVSEID-RFTLK 304
            S+      D  + KA                    TL+VCP   V QW  E+D + T +
Sbjct: 309 ASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDE 368

Query: 305 GSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNL 364
               V ++HG  R +    L ++D V+TTY++V  E  K  +   D          + + 
Sbjct: 369 AKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDD----------ENDE 428

Query: 365 KIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMG 424
           K   KY          K+ K +        +   + S K K NN  N+G           
Sbjct: 429 KNSEKYGLA-SGFSINKKRKNV--------VGTTKKSKKKKGNN--NAG----------- 488

Query: 425 QHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNR 484
               D +      L  V W RV+LDEA  IK+ ++  A+A   + +  RW LSGTPIQN 
Sbjct: 489 ----DSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNT 548

Query: 485 VGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQN 544
           + +LYS  RFL+  PY+ Y                         + FC   K        
Sbjct: 549 IDDLYSYFRFLKYDPYAVY-------------------------KSFCHQIK-------- 608

Query: 545 VGRGPEFKRGMILLK--HKILSSIVLRRTKKGRAAD----LALPPSIVSIRRDTLDIQEE 604
              GP  +  +   K    +L +I+LRRT KG   D    + LPP  +++ +    ++E 
Sbjct: 609 ---GPISRNSLQGYKKLQAVLRAIMLRRT-KGTLLDGQPIINLPPKTINLSQVDFSVEER 668

Query: 605 DFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSI 664
            FY  L +DSR++F  + AAGT   NYA+I  +L+RLRQA +HP LV   R N  S G +
Sbjct: 669 SFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLV--KRYNSDSVGKV 728

Query: 665 DG---------------TDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKL 724
                            +   +   C +CH+P E+PVVT C H FC  C+  +       
Sbjct: 729 SEEAVKKLPKEDLVSLLSRLESSPICCVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDT 788

Query: 725 VSCPSCSKKLTIDF------------------STNLAGRDQTI--KNTIKGFKCTSILNR 784
              P C ++L  D                   S+     D+++         K  ++L+ 
Sbjct: 789 CPAPRCREQLAHDVVFSKSTLRSCVADDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDI 848

Query: 785 IQ-LENFQTSTKIE------------------------ALREEIRFMLERDGSAKGIVFS 844
           +Q L N  TS   +                          +  ++      G  K I+FS
Sbjct: 849 LQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFS 908

Query: 845 QFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALN 874
           Q+T  LDL+  SL ++ I   +L G+MSL  RD A+K F +DPD K+ +MSLKAG + LN
Sbjct: 909 QWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLN 968

[Close]

BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot
Match: Q9FNI6 (DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.9e-85
Identity = 231/759 (30.43%), Postives = 349/759 (45.98%), Query Frame = 0


Query: 182  RGGILADEMGMGKTIQAIALVLAKR-ELSGAGLRRPS----PYPSSSKD---FPLIKAT- 241
            RGGILAD MG+GKT+  I+L+LA   + +  G   P+       SSS D    P +KAT 
Sbjct: 413  RGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATK 472

Query: 242  --------------------LVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLE 301
                                L+VCP+  + QW +EI+     GS  V+V +G  R +  +
Sbjct: 473  FLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAK 532

Query: 302  TLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQ 361
             L + D VITTY V+ +E+                                         
Sbjct: 533  LLSQSDVVITTYGVLTSEF----------------------------------------- 592

Query: 362  AKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVI 421
                                                         + EN      +++V 
Sbjct: 593  ---------------------------------------------SQENSADHEGIYAVR 652

Query: 422  WDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSF 481
            W R++LDEAH IK+ +S  + A  A+ +  RW L+GTPIQN + +LYSL+RFL+I P+  
Sbjct: 653  WFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGT 712

Query: 482  YFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKI 541
            +                             WWNK +    +    G E  RG+ L++  I
Sbjct: 713  W----------------------------AWWNKLVQKPFE---EGDE--RGLKLVQ-SI 772

Query: 542  LSSIVLRRTKKGRAAD----LALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTFVAA 601
            L  I+LRRTK     +    L LPP+   +    L   E DFY++L+  S+ KF+ FV  
Sbjct: 773  LKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQ 832

Query: 602  GTATSNYAHIFDLLIRLRQAVNHPYLVV-------YSRTNVISCGSIDGTDNNNEH---- 661
            G    NYA I +LL+RLRQ  +HP+LV+       YS  N +S   + G  +  E     
Sbjct: 833  GKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKD 892

Query: 662  --------------------ACGICHEPAEEPVVTSCEHTFCKACII-GFANDFSKLVSC 721
                                 C IC E  E+ V+T C H  C+ C++  + N  S L  C
Sbjct: 893  VPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGL--C 952

Query: 722  PSCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLE---NFQTSTKIEALREEIR 781
            P C          N   + + I    +        +R Q++   N+  S+KI AL EE+ 
Sbjct: 953  PVC---------RNTVSKQELITAPTE--------SRFQVDVEKNWVESSKITALLEELE 1012

Query: 782  FMLERDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDC 841
             +  R   +K I+FSQ+T+FLDL+   L+++  + V+L G++S  QR+  +K F +D   
Sbjct: 1013 GL--RSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSI 1028

Query: 842  KIFLMSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENS 873
             + LMSLKAGG+ +NLT AS+ F+MDPWWNPAVE QA  RIHRIGQ K ++I RF+++ +
Sbjct: 1073 LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGT 1028

[Close]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL
Match: A0A6J1J723 (DNA repair protein RAD16 OS=Cucurbita maxima OX=3661 GN=LOC111484062 PE=3 SV=1)

HSP 1 Score: 1756.5 bits (4548), Expect = 0.0e+00
Identity = 873/873 (100.00%), Postives = 873/873 (100.00%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK
Sbjct: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW
Sbjct: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP
Sbjct: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240
           VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA
Sbjct: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240

Query: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300
           VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD
Sbjct: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300

Query: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360
           RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH
Sbjct: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360

Query: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420
           NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS
Sbjct: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420

Query: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480
           SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH
Sbjct: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480

Query: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540
           FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR
Sbjct: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540

Query: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600
           DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT
Sbjct: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600

Query: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660
           NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS
Sbjct: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660

Query: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720
           KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG
Sbjct: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720

Query: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780
           SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL
Sbjct: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780

Query: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840
           KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK
Sbjct: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840

Query: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI
Sbjct: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 873

[Close]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL
Match: A0A6J1FYD3 (DNA repair protein RAD16 OS=Cucurbita moschata OX=3662 GN=LOC111448500 PE=3 SV=1)

HSP 1 Score: 1738.4 bits (4501), Expect = 0.0e+00
Identity = 862/873 (98.74%), Postives = 869/873 (99.54%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRKPTSNILIQGNADGDASD+IDVSSL+SDSESEDPSSSSEDFCEPSTKKSRAKKK
Sbjct: 1   MKLRPRKPTSNILIQGNADGDASDEIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAKKK 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RKGIKEEGPSIEQEVWRKVGND NPHNQTPEVIPVQGVVDIGKPK KYSRKKKQKPILLW
Sbjct: 61  RKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPILLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP
Sbjct: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240
           VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA
Sbjct: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240

Query: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300
           VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD
Sbjct: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300

Query: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360
           RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQ+SKGEVSAKDKNNNFH
Sbjct: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNNNFH 360

Query: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420
           NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDR+ILDEAHFIKDRQSNTAKAVLAISS
Sbjct: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRIILDEAHFIKDRQSNTAKAVLAISS 420

Query: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480
           SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH
Sbjct: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480

Query: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540
           FCWWNKYITL+IQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR
Sbjct: 481 FCWWNKYITLQIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540

Query: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600
           DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT
Sbjct: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600

Query: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660
           NVISCGSIDGTDNNNE ACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS
Sbjct: 601 NVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660

Query: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720
           K LTIDFSTNLAGRD+TIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG
Sbjct: 661 KMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720

Query: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780
           SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL
Sbjct: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780

Query: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840
           KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK
Sbjct: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840

Query: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LQERKELVFEGTVGRSN+ALGKLTLDDMRFLFI
Sbjct: 841 LQERKELVFEGTVGRSNDALGKLTLDDMRFLFI 873

[Close]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL
Match: A0A0A0LN53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416820 PE=3 SV=1)

HSP 1 Score: 1465.3 bits (3792), Expect = 0.0e+00
Identity = 733/875 (83.77%), Postives = 792/875 (90.51%), Query Frame = 0


Query: 1   MKLRPRKPTSNILI-QGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKK 60
           MKLRPRKP SN+LI +GN DGD SDDIDVSSL SD  SED SSSSEDF E STKKSRA+ 
Sbjct: 1   MKLRPRKPASNVLIEEGNVDGDFSDDIDVSSLVSDCGSEDLSSSSEDFSEHSTKKSRART 60

Query: 61  KRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILL 120
           ++K IK++GPSIEQEV   VGND N +N  PE+   QGVVDI KPK KYSRKKK KP LL
Sbjct: 61  QKKRIKKDGPSIEQEVGSNVGNDENLNNPRPEIADSQGVVDIEKPKTKYSRKKKTKPTLL 120

Query: 121 WDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDS 180
           W++W EE+ERWIDENIEKDFD+A+QNEV  EAVETP+ALTMPLLRYQKEWLAWALKQEDS
Sbjct: 121 WNIWEEEYERWIDENIEKDFDLANQNEVFAEAVETPAALTMPLLRYQKEWLAWALKQEDS 180

Query: 181 PVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCPV 240
            ++GGILADEMGMGKTIQAIALVLAKR+LSG AGLRRPS  PSSSKD PLIKATLV+CPV
Sbjct: 181 SIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKDLPLIKATLVICPV 240

Query: 241 IAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPP 300
           +AVSQWVSEIDRFT +GS KV V+HGPKR +SLE L E+DFVITTYSVVEA+YRK+LMPP
Sbjct: 241 VAVSQWVSEIDRFTSEGSYKVLVYHGPKRERSLEVLSEYDFVITTYSVVEADYRKYLMPP 300

Query: 301 KDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNN 360
           KDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQ RKRPIQPQ+ K E S KDKNNN
Sbjct: 301 KDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNN 360

Query: 361 FHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAI 420
            H SG QKST GQT+ +HENDE   G SILHSVIWDRVILDEAHFIKDR SNTAKAVLAI
Sbjct: 361 VHKSGGQKSTLGQTVEEHENDEKHRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAI 420

Query: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRM 480
           SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS++CP+CPHKR+
Sbjct: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKRV 480

Query: 481 RHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSI 540
           RHFCWWNK I+ RIQN GRGPEFKRGMILLKHKILS+IVLRRTKKGRAADLALPPS VSI
Sbjct: 481 RHFCWWNKNISQRIQNFGRGPEFKRGMILLKHKILSTIVLRRTKKGRAADLALPPSTVSI 540

Query: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYS 600
           RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGT TSNYAHIFDLLIRLRQAVNHPYLVVYS
Sbjct: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYS 600

Query: 601 RTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPS 660
           +TN I+ G+ID +D+NN+  CGIC+EPAEEPV TSC+HTFCKAC+I +A DFSK VSCPS
Sbjct: 601 KTNAINSGNIDDSDSNNKQVCGICYEPAEEPVDTSCKHTFCKACLIDYAGDFSKPVSCPS 660

Query: 661 CSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLER 720
           CSK LT DF T++A +DQT+KN IKGFK +SILNRIQLENFQTSTKIEALREEIRFM ER
Sbjct: 661 CSKMLTSDFITSMAFKDQTVKNKIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFER 720

Query: 721 DGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLM 780
           DGSAKGIVFSQFTSFLDLINYSL+KSGITCVQL+GSMSL QR DAI RFI+DPDCKIFLM
Sbjct: 721 DGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLM 780

Query: 781 SLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERI 840
           SLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEERI
Sbjct: 781 SLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERI 840

Query: 841 LKLQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LKLQERKELVFEGTVGRSNEALG+LTLDDMR+LF+
Sbjct: 841 LKLQERKELVFEGTVGRSNEALGRLTLDDMRYLFL 875

[Close]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL
Match: A0A5D3DZG8 (DNA repair protein RAD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3695G00010 PE=3 SV=1)

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 732/875 (83.66%), Postives = 792/875 (90.51%), Query Frame = 0


Query: 1   MKLRPRKPTSNILI-QGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKK 60
           MKLRPRKP SN+LI +GN DGD+SDDIDV    SD  SED SSSSEDF E STKKSRA+ 
Sbjct: 1   MKLRPRKPASNVLIEEGNVDGDSSDDIDV----SDCGSEDHSSSSEDFSEHSTKKSRART 60

Query: 61  KRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILL 120
           ++K IK++GPSIEQEV   VGND N +NQ PE+   QGVV+I KPK KYSR KK KP LL
Sbjct: 61  QKKRIKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSR-KKPKPTLL 120

Query: 121 WDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDS 180
           W++W EE+ERWIDENIEKDFD+A+QNEVL E+VETP+ALTMPLLRYQKEWLAWALKQEDS
Sbjct: 121 WNIWEEEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQEDS 180

Query: 181 PVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCPV 240
            ++GGILADEMGMGKTIQAIALVLAKR+LSG AGLRRPS  PSSSK+ PLIKATLV+CPV
Sbjct: 181 SIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICPV 240

Query: 241 IAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPP 300
           +AVSQWVSEIDRFT +GS KV V+HGPKR +SLE L E+DFVITTYSVVEA+YRK+LMPP
Sbjct: 241 VAVSQWVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMPP 300

Query: 301 KDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNN 360
           KDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQ RKRPIQPQ+ K E S KDKNNN
Sbjct: 301 KDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNN 360

Query: 361 FHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAI 420
            H SG+QKST GQT+G+HENDE P G SILHSVIWDRVILDEAHFIKDR SNTAKAVLAI
Sbjct: 361 VHKSGAQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAI 420

Query: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRM 480
           SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS +CP+CPHKR+
Sbjct: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKRV 480

Query: 481 RHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSI 540
           RHFCWWNK IT RIQN GRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPS VSI
Sbjct: 481 RHFCWWNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVSI 540

Query: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYS 600
           RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGT TSNYAHIFDLLIRLRQAVNHPYLVVYS
Sbjct: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYS 600

Query: 601 RTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPS 660
           +T  I+ G+ID +D+NN+  CG+CHEPAEEPV TSC+H FCKACII +A DFSK VSCPS
Sbjct: 601 KTKAINSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCPS 660

Query: 661 CSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLER 720
           CSK LT DF T++A +DQT+KNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM ER
Sbjct: 661 CSKMLTSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFER 720

Query: 721 DGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLM 780
           DGSAKGIVFSQFTSFLDLINYSL+KSGITCVQL+GSMSL QR DAI RFI+DPDCKIFLM
Sbjct: 721 DGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLM 780

Query: 781 SLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERI 840
           SLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEERI
Sbjct: 781 SLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERI 840

Query: 841 LKLQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LKLQERKELVFEGTVGRSNEALG+LTLDDMR+LF+
Sbjct: 841 LKLQERKELVFEGTVGRSNEALGRLTLDDMRYLFL 870

[Close]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL
Match: A0A1S3C1J5 (DNA repair protein RAD16 OS=Cucumis melo OX=3656 GN=LOC103495970 PE=3 SV=1)

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 732/875 (83.66%), Postives = 792/875 (90.51%), Query Frame = 0


Query: 1   MKLRPRKPTSNILI-QGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKK 60
           MKLRPRKP SN+LI +GN DGD+SDDIDV    SD  SED SSSSEDF E STKKSRA+ 
Sbjct: 1   MKLRPRKPASNVLIEEGNVDGDSSDDIDV----SDCGSEDHSSSSEDFSEHSTKKSRART 60

Query: 61  KRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILL 120
           ++K IK++GPSIEQEV   VGND N +NQ PE+   QGVV+I KPK KYSR KK KP LL
Sbjct: 61  QKKRIKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSR-KKPKPTLL 120

Query: 121 WDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDS 180
           W++W EE+ERWIDENIEKDFD+A+QNEVL E+VETP+ALTMPLLRYQKEWLAWALKQEDS
Sbjct: 121 WNIWEEEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQEDS 180

Query: 181 PVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCPV 240
            ++GGILADEMGMGKTIQAIALVLAKR+LSG AGLRRPS  PSSSK+ PLIKATLV+CPV
Sbjct: 181 SIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICPV 240

Query: 241 IAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPP 300
           +AVSQWVSEIDRFT +GS KV V+HGPKR +SLE L E+DFVITTYSVVEA+YRK+LMPP
Sbjct: 241 VAVSQWVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMPP 300

Query: 301 KDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNN 360
           KDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQ RKRPIQPQ+ K E S KDKNNN
Sbjct: 301 KDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNN 360

Query: 361 FHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAI 420
            H SG+QKST GQT+G+HENDE P G SILHSVIWDRVILDEAHFIKDR SNTAKAVLAI
Sbjct: 361 VHKSGAQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAI 420

Query: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRM 480
           SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS +CP+CPHKR+
Sbjct: 421 SSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKRV 480

Query: 481 RHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSI 540
           RHFCWWNK IT RIQN GRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPS VSI
Sbjct: 481 RHFCWWNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVSI 540

Query: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYS 600
           RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGT TSNYAHIFDLLIRLRQAVNHPYLVVYS
Sbjct: 541 RRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYS 600

Query: 601 RTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPS 660
           +T  I+ G+ID +D+NN+  CG+CHEPAEEPV TSC+H FCKACII +A DFSK VSCPS
Sbjct: 601 KTKAINSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCPS 660

Query: 661 CSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLER 720
           CSK LT DF T++A +DQT+KNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM ER
Sbjct: 661 CSKMLTSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFER 720

Query: 721 DGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLM 780
           DGSAKGIVFSQFTSFLDLINYSL+KSGITCVQL+GSMSL QR DAI RFI+DPDCKIFLM
Sbjct: 721 DGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLM 780

Query: 781 SLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERI 840
           SLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEERI
Sbjct: 781 SLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERI 840

Query: 841 LKLQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LKLQERKELVFEGTVGRSNEALG+LTLDDMR+LF+
Sbjct: 841 LKLQERKELVFEGTVGRSNEALGRLTLDDMRYLFL 870

[Close]

BLAST of CmaCh20G006090 vs. NCBI nr
Match: XP_022986252.1 (DNA repair protein RAD16 [Cucurbita maxima])

HSP 1 Score: 1756.5 bits (4548), Expect = 0.0e+00
Identity = 873/873 (100.00%), Postives = 873/873 (100.00%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK
Sbjct: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW
Sbjct: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP
Sbjct: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240
           VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA
Sbjct: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240

Query: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300
           VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD
Sbjct: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300

Query: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360
           RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH
Sbjct: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360

Query: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420
           NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS
Sbjct: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420

Query: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480
           SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH
Sbjct: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480

Query: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540
           FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR
Sbjct: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540

Query: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600
           DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT
Sbjct: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600

Query: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660
           NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS
Sbjct: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660

Query: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720
           KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG
Sbjct: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720

Query: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780
           SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL
Sbjct: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780

Query: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840
           KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK
Sbjct: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840

Query: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI
Sbjct: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 873

[Close]

BLAST of CmaCh20G006090 vs. NCBI nr
Match: XP_022943925.1 (DNA repair protein RAD16 [Cucurbita moschata] >XP_022943926.1 DNA repair protein RAD16 [Cucurbita moschata])

HSP 1 Score: 1738.4 bits (4501), Expect = 0.0e+00
Identity = 862/873 (98.74%), Postives = 869/873 (99.54%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRKPTSNILIQGNADGDASD+IDVSSL+SDSESEDPSSSSEDFCEPSTKKSRAKKK
Sbjct: 1   MKLRPRKPTSNILIQGNADGDASDEIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAKKK 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RKGIKEEGPSIEQEVWRKVGND NPHNQTPEVIPVQGVVDIGKPK KYSRKKKQKPILLW
Sbjct: 61  RKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPILLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP
Sbjct: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240
           VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA
Sbjct: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240

Query: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300
           VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD
Sbjct: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300

Query: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360
           RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQ+SKGEVSAKDKNNNFH
Sbjct: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNNNFH 360

Query: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420
           NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDR+ILDEAHFIKDRQSNTAKAVLAISS
Sbjct: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRIILDEAHFIKDRQSNTAKAVLAISS 420

Query: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480
           SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH
Sbjct: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480

Query: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540
           FCWWNKYITL+IQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR
Sbjct: 481 FCWWNKYITLQIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540

Query: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600
           DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT
Sbjct: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600

Query: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660
           NVISCGSIDGTDNNNE ACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS
Sbjct: 601 NVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660

Query: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720
           K LTIDFSTNLAGRD+TIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG
Sbjct: 661 KMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720

Query: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780
           SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL
Sbjct: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780

Query: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840
           KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK
Sbjct: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840

Query: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LQERKELVFEGTVGRSN+ALGKLTLDDMRFLFI
Sbjct: 841 LQERKELVFEGTVGRSNDALGKLTLDDMRFLFI 873

[Close]

BLAST of CmaCh20G006090 vs. NCBI nr
Match: XP_023512492.1 (DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512493.1 DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1737.2 bits (4498), Expect = 0.0e+00
Identity = 862/873 (98.74%), Postives = 868/873 (99.43%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRKPTSNILIQGNADGDASDDIDVSSL+SDSESEDPSSSSEDFCEPSTKKSRAKKK
Sbjct: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAKKK 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RKGIKEEGPSIEQEVWRKVGND NPHNQTPEVIPVQGVVDIGKPK KYSRKKKQKPILLW
Sbjct: 61  RKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPILLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP
Sbjct: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240
           VRGGILADEMGMGKTIQAIALVLAKREL GAGLRRPSPYPSSSKDFPLIKATLVVCPVIA
Sbjct: 181 VRGGILADEMGMGKTIQAIALVLAKRELPGAGLRRPSPYPSSSKDFPLIKATLVVCPVIA 240

Query: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300
           VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD
Sbjct: 241 VSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKD 300

Query: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFH 360
           RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQ+SKGEVSAKDKNNNFH
Sbjct: 301 RCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNNNFH 360

Query: 361 NSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420
           NSGSQKSTFGQTMGQHEN+ENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS
Sbjct: 361 NSGSQKSTFGQTMGQHENEENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISS 420

Query: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480
           SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH
Sbjct: 421 SFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRH 480

Query: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540
           FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR
Sbjct: 481 FCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRR 540

Query: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRT 600
           DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYS+T
Sbjct: 541 DTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSKT 600

Query: 601 NVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660
           NVISCGSIDGTDNNNE ACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS
Sbjct: 601 NVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCS 660

Query: 661 KKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720
           K LTIDFSTNLAGRD+TIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG
Sbjct: 661 KMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDG 720

Query: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780
           SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL
Sbjct: 721 SAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSL 780

Query: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840
           KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK
Sbjct: 781 KAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILK 840

Query: 841 LQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           LQERKELVFEGTVGRSN+ALGKLTLDDMRFLFI
Sbjct: 841 LQERKELVFEGTVGRSNDALGKLTLDDMRFLFI 873

[Close]

BLAST of CmaCh20G006090 vs. NCBI nr
Match: KAG7010739.1 (RAD16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1673.7 bits (4333), Expect = 0.0e+00
Identity = 830/848 (97.88%), Postives = 835/848 (98.47%), Query Frame = 0


Query: 26  IDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKKRKGIKEEGPSIEQEVWRKVGNDGNP 85
           +DV S        DPSSSSEDFCEPSTKKSRAKKKRKGIKEEGPSIEQEVWRKVGND NP
Sbjct: 11  LDVKSRVDTFNWADPSSSSEDFCEPSTKKSRAKKKRKGIKEEGPSIEQEVWRKVGNDENP 70

Query: 86  HNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLWDVWAEEHERWIDENIEKDFDMASQN 145
           HNQTPEVIPVQGVVDIGKPK KYSRKKKQKPILLWDVWAEEHERWIDENIEKDFDMASQN
Sbjct: 71  HNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPILLWDVWAEEHERWIDENIEKDFDMASQN 130

Query: 146 EVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILADEMGMGKTIQAIALVLAK 205
           EVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILADEMGMGKTIQAIALVLAK
Sbjct: 131 EVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILADEMGMGKTIQAIALVLAK 190

Query: 206 RELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGP 265
           RELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGP
Sbjct: 191 RELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGP 250

Query: 266 KRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPD 325
           KRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPD
Sbjct: 251 KRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPD 310

Query: 326 AVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGK 385
           AVKTEKQAKQIRKRPIQPQ+SKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGK
Sbjct: 311 AVKTEKQAKQIRKRPIQPQISKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGK 370

Query: 386 SILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFL 445
           SILHSVIWDR+ILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFL
Sbjct: 371 SILHSVIWDRIILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFL 430

Query: 446 QIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGM 505
           QIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGM
Sbjct: 431 QIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGM 490

Query: 506 ILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTF 565
           ILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTF
Sbjct: 491 ILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTF 550

Query: 566 VAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSIDGTDNNNEHACGICHEP 625
           VAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSIDGTDNNNE ACGICHEP
Sbjct: 551 VAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSIDGTDNNNEQACGICHEP 610

Query: 626 AEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCSKKLTIDFSTNLAGRDQTIKNTIKGF 685
           AEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCSK LTIDFSTNLAGRD+TIKNTIKGF
Sbjct: 611 AEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCSKMLTIDFSTNLAGRDRTIKNTIKGF 670

Query: 686 KCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSG 745
           KCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSG
Sbjct: 671 KCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSG 730

Query: 746 ITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPA 805
           ITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPA
Sbjct: 731 ITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPA 790

Query: 806 VERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQERKELVFEGTVGRSNEALGKLTL 865
           VERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQERKELVFEGTVGRSN+ALGKLTL
Sbjct: 791 VERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQERKELVFEGTVGRSNDALGKLTL 850

Query: 866 DDMRFLFI 874
           DDMRFLFI
Sbjct: 851 DDMRFLFI 858

[Close]

BLAST of CmaCh20G006090 vs. NCBI nr
Match: XP_038902046.1 (ATP-dependent helicase rhp16 [Benincasa hispida])

HSP 1 Score: 1510.0 bits (3908), Expect = 0.0e+00
Identity = 760/874 (86.96%), Postives = 800/874 (91.53%), Query Frame = 0


Query: 1   MKLRPRKPTSNILIQGNADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAKKK 60
           MKLRPRK TSN+ I+GN D DASDDIDVSSL SDS  E  SSSSED  EPS KKSRAK +
Sbjct: 1   MKLRPRKTTSNVFIEGNGDRDASDDIDVSSLVSDSGCEVLSSSSEDSGEPSIKKSRAKTR 60

Query: 61  RKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPILLW 120
           RK IK+EGPSIEQEV   VGND N HNQ PE+   QGVVDI KPK KYSRKKK KP LLW
Sbjct: 61  RKRIKKEGPSIEQEVGSNVGNDENIHNQKPEIANSQGVVDIEKPKTKYSRKKKPKPTLLW 120

Query: 121 DVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSP 180
           +VW EE+ERWIDENIEKDFD+A+QNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDS 
Sbjct: 121 NVWEEEYERWIDENIEKDFDLANQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSS 180

Query: 181 VRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCPVI 240
           ++GGILADEMGMGKTIQAIALVLAKR+LSG +GLRRPS +PSSSKD P IKATLV+CPV+
Sbjct: 181 IKGGILADEMGMGKTIQAIALVLAKRQLSGTSGLRRPSTHPSSSKDLPSIKATLVICPVV 240

Query: 241 AVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPK 300
           AVSQWVSEIDRFT KGS KV V+HGPKR QSLE L E+DFVITTYSVVEA+YRKHLMPPK
Sbjct: 241 AVSQWVSEIDRFTSKGSYKVLVYHGPKRVQSLEILSEYDFVITTYSVVEADYRKHLMPPK 300

Query: 301 DRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNF 360
           DRCPYC+KLFYKK LK HL YICGPDAVKTEKQAKQ RKRPIQPQ+ K E SAK KNNN 
Sbjct: 301 DRCPYCNKLFYKKKLKFHLMYICGPDAVKTEKQAKQQRKRPIQPQIYKQEESAKGKNNNV 360

Query: 361 HNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAIS 420
           H  G QKST GQTMGQ+ENDE PCGKS+LHSVIWDRVILDEAHFIKDR SNTAKAVLAIS
Sbjct: 361 HKRGGQKSTLGQTMGQNENDEKPCGKSVLHSVIWDRVILDEAHFIKDRLSNTAKAVLAIS 420

Query: 421 SSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMR 480
           SSFRWALSGTPIQNRVGELYSL+RFLQIVPYSFYFCKDCDCRTLDHSS +CP+CPHKR+R
Sbjct: 421 SSFRWALSGTPIQNRVGELYSLIRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKRVR 480

Query: 481 HFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIR 540
           HFCWWNK ITLRIQN GRGPEFKRGMILLKHKILSS VLRRTKKGRAA+LALPPSIVSIR
Sbjct: 481 HFCWWNKNITLRIQNFGRGPEFKRGMILLKHKILSSTVLRRTKKGRAAELALPPSIVSIR 540

Query: 541 RDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSR 600
           RDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYS+
Sbjct: 541 RDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSK 600

Query: 601 TNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSC 660
           TN ISCGSI  +DNNN+  CGICHEPAEEPVV+SCEHTFCKACII + NDFSK VSCPSC
Sbjct: 601 TNAISCGSIADSDNNNQ-LCGICHEPAEEPVVSSCEHTFCKACIIDYTNDFSKRVSCPSC 660

Query: 661 SKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERD 720
           SK LTIDFST+LA RDQT+KNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM ERD
Sbjct: 661 SKMLTIDFSTSLAVRDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFERD 720

Query: 721 GSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMS 780
           GSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSL QR DAI RFIDDPDCKIFLMS
Sbjct: 721 GSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLTQRGDAINRFIDDPDCKIFLMS 780

Query: 781 LKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERIL 840
           LKAGGIALNLTVAS+VFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRF+IENSIEERIL
Sbjct: 781 LKAGGIALNLTVASNVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEERIL 840

Query: 841 KLQERKELVFEGTVGRSNEALGKLTLDDMRFLFI 874
           KLQERKELVFEGTVG SNEALGKL+LDDMRFLF+
Sbjct: 841 KLQERKELVFEGTVGGSNEALGKLSLDDMRFLFL 873

[Close]

BLAST of CmaCh20G006090 vs. TAIR 10
Match: AT1G05120.1 (Helicase protein with RING/U-box domain )

HSP 1 Score: 971.8 bits (2511), Expect = 3.5e-283
Identity = 483/806 (59.93%), Postives = 611/806 (75.81%), Query Frame = 0


Query: 72  EQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKK----KQKPILLWDVWAEEH 131
           E+E+   V ND       P  +PV  +V++  P+A   RKK    K+K +LLW+ W +E 
Sbjct: 52  EEELEEVVAND-----DLPNPVPVLAIVNL--PRASKKRKKPDARKEKVVLLWETWEKEQ 111

Query: 132 ERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVRGGILA 191
             WIDE++ +D D+   N V+ E  E PS L MPLLRYQKE+LAWA KQE S V GGILA
Sbjct: 112 NSWIDEHMSEDVDLDQHNAVIAETAEPPSDLIMPLLRYQKEFLAWATKQEQS-VAGGILA 171

Query: 192 DEMGMGKTIQAIALVLAKRELSGAGLRRPSPYPSSSKDFPLIKATLVVCPVIAVSQWVSE 251
           DEMGMGKTIQAI+LVLA+RE+  A     +              TLV+CP++AVSQW++E
Sbjct: 172 DEMGMGKTIQAISLVLARREVDRAQFGEAA------------GCTLVLCPLVAVSQWLNE 231

Query: 252 IDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSK 311
           I RFT  GS KV V+HG KRA++++    +DFV+TTYS VE+EYR+++MP K +C YCSK
Sbjct: 232 IARFTSPGSTKVLVYHGAKRAKNIKEFMNYDFVLTTYSTVESEYRRNIMPSKVQCAYCSK 291

Query: 312 LFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKS 371
            FY K L IHL+Y CGP AVKT KQ+KQ RK+       +G+ +   ++     S   K 
Sbjct: 292 SFYPKKLVIHLRYFCGPSAVKTAKQSKQKRKKTSDSSSQQGKEADAGEDKKLKKS---KK 351

Query: 372 TFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALS 431
              QT+ + +   +   KS+LHSV W+R+ILDEAH+IK+R+SNTA+AV A+ +++RWALS
Sbjct: 352 KTKQTVEKDQLGSDDKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALS 411

Query: 432 GTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDH-SSVSCPDCPHKRMRHFCWWNK 491
           GTP+QNRVGELYSL+RFLQI PYS+YFCKDCDCR LD+ +  SCP CPH  +RHFCWWNK
Sbjct: 412 GTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNK 471

Query: 492 YITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVSIRRDTLDIQ 551
           Y+   I   G     KR MILLKHK+L  I+LRRTK GRAADLALPP I+++RRDTLD++
Sbjct: 472 YVAKPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVK 531

Query: 552 EEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCG 611
           E D+YESLY +S+A+FNT++ AGT  +NYAHIFDLL RLRQAV+HPYLVVYS ++  +  
Sbjct: 532 EFDYYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANAN 591

Query: 612 SIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCPSCSKKLTID 671
            +D  +N +E  CG+CH+PAE+ VVTSC H FCKAC+IGF+    K V+CP+CSK LT+D
Sbjct: 592 LVD--ENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGK-VTCPTCSKLLTVD 651

Query: 672 FSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLERDGSAKGIV 731
           ++T      +  K T+KGF+ +SILNRI+L++FQTSTKIEALREEIRFM+ERDGSAK IV
Sbjct: 652 WTTKADTEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIV 711

Query: 732 FSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIA 791
           FSQFTSFLDLINY+L K G++CVQL+GSM++  RD AI +F +DPDC++FLMSLKAGG+A
Sbjct: 712 FSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVA 771

Query: 792 LNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEERILKLQERKE 851
           LNLTVASHVF+MDPWWNPAVERQAQDRIHRIGQYKPIR+ RF+IEN++EERIL+LQ++KE
Sbjct: 772 LNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKE 831

Query: 852 LVFEGTVGRSNEALGKLTLDDMRFLF 873
           LVFEGTVG S EA+GKLT +DMRFLF
Sbjct: 832 LVFEGTVGGSQEAIGKLTEEDMRFLF 831

[Close]

BLAST of CmaCh20G006090 vs. TAIR 10
Match: AT1G02670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 525.0 bits (1351), Expect = 1.1e-148
Identity = 341/838 (40.69%), Postives = 453/838 (54.06%), Query Frame = 0


Query: 39  DPSSSSEDFCEPSTKKSRAKKKRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGV 98
           +P S  ++   PS+ +    K     +EE P  +  V  +V  + N ++  P        
Sbjct: 40  EPHSHHKNAILPSSSQDENLK-----EEEVPDDDDSVGGEVQGEVNANDYIP-------- 99

Query: 99  VDIGKPKAKYSRKKKQKPILLWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSAL 158
                P A  + K+K      W +  E+ +   D+    DFD   QN V+ EA E P  L
Sbjct: 100 ----NPAAPANTKRK------WQIMKEKVQMTEDD----DFD--EQNAVIAEAAEQPLDL 159

Query: 159 TMPLLRYQKEWLAWALKQEDSPVRGGILADEMGMGKTIQAIALVLAKRELSGAGLRRPSP 218
            +PLL+YQKE+LAWA  QE S VRGGILADEMGMGKTIQAI+LVLA+RE+  A       
Sbjct: 160 IIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRA------- 219

Query: 219 YPSSSKDFPLIKATLVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFD 278
                K    +  TLV+ P +A+SQW+ EI R T  GS +V  +HGPKR ++++ L  +D
Sbjct: 220 -----KSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYD 279

Query: 279 FVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRK 338
           FV+TT  +VE EYRK                                             
Sbjct: 280 FVLTTSPIVENEYRK--------------------------------------------- 339

Query: 339 RPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVIL 398
                                           +TM            S LHS+ W+R+I+
Sbjct: 340 ---------------------------DEGVDETM------------SPLHSIKWNRIIV 399

Query: 399 DEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSF--YFCK 458
           DEAH IK+R S TAKAV A+ +++RWALSGTP+QN V ELYSL      V YSF  +F  
Sbjct: 400 DEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSL------VSYSFLNFFYS 459

Query: 459 DCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILS-S 518
                   H+ ++              + + +T++               L+   IL  S
Sbjct: 460 TYASFAFRHTHIT--------------FARNVTVK--------------FLIGGNILPLS 519

Query: 519 IVLRRTKKGRAADLALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNY 578
           I +R         + +  S+   RRD L + E DFYESLY  S+  F+ ++ AGT  +NY
Sbjct: 520 IPVRIENVPAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNY 579

Query: 579 AHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCE 638
           AHIF LLIRLRQAV+HPYLV YS  +  +   +D   N NE  CG  H+P+++  VTS E
Sbjct: 580 AHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDA--NKNEKECGFGHDPSKDYFVTSSE 639

Query: 639 HTFCKACIIGFANDFSKLVSCPSCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQ 698
           H                                       Q  K  +KGF+ +SILNRI 
Sbjct: 640 H---------------------------------------QASKTKLKGFRASSILNRIN 677

Query: 699 LENFQTSTKIEALREEIRFMLERDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSM 758
           L++F+TSTKIEALREEIRFM+ERD SAK IVFSQFTSFLDLI+Y+L KSG++CVQL+GSM
Sbjct: 700 LDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSM 677

Query: 759 SLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIH 818
           S   +D A+K F ++PDC++ LMSL+AGG+ALNLT ASHVF+MDPWWNPAVERQAQDRIH
Sbjct: 760 SKAAKDAALKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIH 677

Query: 819 RIGQYKPIRITRFVIENSIEERILKLQERKELVFEGTVGRSNEA-LGKLTLDDMRFLF 873
           RIGQ KP+R+ RF++E ++EE+IL LQ++KE +FE T+G S EA + KL  DD++ LF
Sbjct: 820 RIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSEEAVVQKLGEDDIKSLF 677

[Close]

BLAST of CmaCh20G006090 vs. TAIR 10
Match: AT3G20010.1 (SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related )

HSP 1 Score: 326.6 bits (836), Expect = 6.0e-89
Identity = 256/873 (29.32%), Postives = 386/873 (44.22%), Query Frame = 0


Query: 132  DENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVR--GGILADE 191
            DE +     +   N+ +TE+   P  L++PL+R+QK  LAW  ++E S     GGILAD+
Sbjct: 251  DERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPGGILADD 310

Query: 192  MGMGKTIQAIALVLAKRELS-----------------------------GAGLRRPSPYP 251
             G+GKT+  IAL+L ++ +S                                  +P    
Sbjct: 311  QGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNAKHESGSHVKPELKV 370

Query: 252  SSSKDFPLIKA----------------------------------TLVVCPVIAVSQWVS 311
            SS+ +  ++ A                                  TL+VCP   V QW  
Sbjct: 371  SSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPAAGTLIVCPASVVRQWAR 430

Query: 312  EIDRFTLKGSN-KVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYC 371
            E+D    + S   V V+HG  R +    L E+D V+TTY++V  E     +  +D     
Sbjct: 431  ELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNEAPNKFLVDEDEND-- 490

Query: 372  SKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQ 431
                 +KN           D           +KR +    SK       K+ N  +S   
Sbjct: 491  -----EKN----------TDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSS--- 550

Query: 432  KSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWA 491
                       E D  P GK     V W R++LDEA  IK+ ++  A++   + +  RW 
Sbjct: 551  -----------EPDCGPLGK-----VGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWC 610

Query: 492  LSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWN 551
            LSGTPIQN + +LYS  RFL+  PY+ Y           +S++  P       R+ C   
Sbjct: 611  LSGTPIQNTIDDLYSYFRFLRYDPYAVY--------KSFYSTIKVP-----ISRNSCQGY 670

Query: 552  KYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAAD----LALPPSIVSIRRD 611
            K +                       +L +I+LRRT KG   D    + LPP +V++ + 
Sbjct: 671  KKL---------------------QAVLRAIMLRRT-KGTLLDGKPIINLPPKVVNLSQV 730

Query: 612  TLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTN 671
               + E  FY+ L  DSR++F  +  AGT + NYA+I  LL+RLRQA +HP LV   R N
Sbjct: 731  DFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV--KRYN 790

Query: 672  VISCGSIDGTD----------------NNNEHACGICHEPAEEPVVTSCEHTFCKACIIG 731
                G +                     ++   C  C+EP E+PVVT C H FC  C++ 
Sbjct: 791  SDPVGKVSEAAVRRLPREARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLE 850

Query: 732  FANDFSKLVSCPSCSKKLTIDFSTNLAGRDQTIKN-TIKGFKCTSIL-NRIQLENFQ--- 791
            +          P C ++L  D    +   + +++N T     C+S   N +    FQ   
Sbjct: 851  YITGDENTCPVPRCKQQLARD----VVFSESSLRNCTSDDSGCSSSHDNGLDRSVFQKRD 910

Query: 792  -TSTKIEALREEIRFMLERD-------------------------------------GSA 851
              S+KI+A+ + ++ + + D                                     G+ 
Sbjct: 911  FCSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAV 970

Query: 852  KGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKA 874
            K I+FSQ+T  LDL+   + +SGI   +L G+MSL  RD A+K F   PD K+ LMSLKA
Sbjct: 971  KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 1030

[Close]

BLAST of CmaCh20G006090 vs. TAIR 10
Match: AT1G50410.1 (SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related )

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-88
Identity = 255/867 (29.41%), Postives = 383/867 (44.18%), Query Frame = 0


Query: 125 EEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSPVR-- 184
           EE     DE +     +   N+  +E       L++PL+++QK  LAW  ++E + +   
Sbjct: 189 EERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSLHCM 248

Query: 185 GGILADEMGMGKTIQAIALVL-----AKRELSGAG------------------LRRPSPY 244
           GGILAD+ G+GKT+  IAL+L     AK +   +G                    +P   
Sbjct: 249 GGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKPESK 308

Query: 245 PSSSK----DFPLIKA--------------------TLVVCPVIAVSQWVSEID-RFTLK 304
            S+      D  + KA                    TL+VCP   V QW  E+D + T +
Sbjct: 309 ASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDE 368

Query: 305 GSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNL 364
               V ++HG  R +    L ++D V+TTY++V  E  K  +   D          + + 
Sbjct: 369 AKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDD----------ENDE 428

Query: 365 KIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMG 424
           K   KY          K+ K +        +   + S K K NN  N+G           
Sbjct: 429 KNSEKYGLA-SGFSINKKRKNV--------VGTTKKSKKKKGNN--NAG----------- 488

Query: 425 QHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNR 484
               D +      L  V W RV+LDEA  IK+ ++  A+A   + +  RW LSGTPIQN 
Sbjct: 489 ----DSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNT 548

Query: 485 VGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQN 544
           + +LYS  RFL+  PY+ Y                         + FC   K        
Sbjct: 549 IDDLYSYFRFLKYDPYAVY-------------------------KSFCHQIK-------- 608

Query: 545 VGRGPEFKRGMILLK--HKILSSIVLRRTKKGRAAD----LALPPSIVSIRRDTLDIQEE 604
              GP  +  +   K    +L +I+LRRT KG   D    + LPP  +++ +    ++E 
Sbjct: 609 ---GPISRNSLQGYKKLQAVLRAIMLRRT-KGTLLDGQPIINLPPKTINLSQVDFSVEER 668

Query: 605 DFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVYSRTNVISCGSI 664
            FY  L +DSR++F  + AAGT   NYA+I  +L+RLRQA +HP LV   R N  S G +
Sbjct: 669 SFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLV--KRYNSDSVGKV 728

Query: 665 DG---------------TDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKL 724
                            +   +   C +CH+P E+PVVT C H FC  C+  +       
Sbjct: 729 SEEAVKKLPKEDLVSLLSRLESSPICCVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDT 788

Query: 725 VSCPSCSKKLTIDF------------------STNLAGRDQTI--KNTIKGFKCTSILNR 784
              P C ++L  D                   S+     D+++         K  ++L+ 
Sbjct: 789 CPAPRCREQLAHDVVFSKSTLRSCVADDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDI 848

Query: 785 IQ-LENFQTSTKIE------------------------ALREEIRFMLERDGSAKGIVFS 844
           +Q L N  TS   +                          +  ++      G  K I+FS
Sbjct: 849 LQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFS 908

Query: 845 QFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFLMSLKAGGIALN 874
           Q+T  LDL+  SL ++ I   +L G+MSL  RD A+K F +DPD K+ +MSLKAG + LN
Sbjct: 909 QWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKAGNLGLN 968

[Close]

BLAST of CmaCh20G006090 vs. TAIR 10
Match: AT5G22750.1 (DNA/RNA helicase protein )

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-86
Identity = 231/759 (30.43%), Postives = 349/759 (45.98%), Query Frame = 0


Query: 182  RGGILADEMGMGKTIQAIALVLAKR-ELSGAGLRRPS----PYPSSSKD---FPLIKAT- 241
            RGGILAD MG+GKT+  I+L+LA   + +  G   P+       SSS D    P +KAT 
Sbjct: 413  RGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATK 472

Query: 242  --------------------LVVCPVIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLE 301
                                L+VCP+  + QW +EI+     GS  V+V +G  R +  +
Sbjct: 473  FLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAK 532

Query: 302  TLFEFDFVITTYSVVEAEYRKHLMPPKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQ 361
             L + D VITTY V+ +E+                                         
Sbjct: 533  LLSQSDVVITTYGVLTSEF----------------------------------------- 592

Query: 362  AKQIRKRPIQPQLSKGEVSAKDKNNNFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVI 421
                                                         + EN      +++V 
Sbjct: 593  ---------------------------------------------SQENSADHEGIYAVR 652

Query: 422  WDRVILDEAHFIKDRQSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSF 481
            W R++LDEAH IK+ +S  + A  A+ +  RW L+GTPIQN + +LYSL+RFL+I P+  
Sbjct: 653  WFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGT 712

Query: 482  YFCKDCDCRTLDHSSVSCPDCPHKRMRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKI 541
            +                             WWNK +    +    G E  RG+ L++  I
Sbjct: 713  W----------------------------AWWNKLVQKPFE---EGDE--RGLKLVQ-SI 772

Query: 542  LSSIVLRRTKKGRAAD----LALPPSIVSIRRDTLDIQEEDFYESLYNDSRAKFNTFVAA 601
            L  I+LRRTK     +    L LPP+   +    L   E DFY++L+  S+ KF+ FV  
Sbjct: 773  LKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQ 832

Query: 602  GTATSNYAHIFDLLIRLRQAVNHPYLVV-------YSRTNVISCGSIDGTDNNNEH---- 661
            G    NYA I +LL+RLRQ  +HP+LV+       YS  N +S   + G  +  E     
Sbjct: 833  GKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKD 892

Query: 662  --------------------ACGICHEPAEEPVVTSCEHTFCKACII-GFANDFSKLVSC 721
                                 C IC E  E+ V+T C H  C+ C++  + N  S L  C
Sbjct: 893  VPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGL--C 952

Query: 722  PSCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLE---NFQTSTKIEALREEIR 781
            P C          N   + + I    +        +R Q++   N+  S+KI AL EE+ 
Sbjct: 953  PVC---------RNTVSKQELITAPTE--------SRFQVDVEKNWVESSKITALLEELE 1012

Query: 782  FMLERDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDC 841
             +  R   +K I+FSQ+T+FLDL+   L+++  + V+L G++S  QR+  +K F +D   
Sbjct: 1013 GL--RSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSI 1028

Query: 842  KIFLMSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENS 873
             + LMSLKAGG+ +NLT AS+ F+MDPWWNPAVE QA  RIHRIGQ K ++I RF+++ +
Sbjct: 1073 LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGT 1028

The following BLAST results are available for this feature:

BLAST of CmaCh20G006090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P79051	4.2e-140	39.30	ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P31244	4.8e-136	36.05	DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]
Q9LHE4	8.4e-88	29.32	Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana OX=3702 GN=CHR2...	[more]
Q94BR5	1.4e-87	29.41	Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana OX=3702 GN=CHR2...	[more]
Q9FNI6	3.9e-85	30.43	DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1	[more]

BLAST of CmaCh20G006090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J723	0.0e+00	100.00	DNA repair protein RAD16 OS=Cucurbita maxima OX=3661 GN=LOC111484062 PE=3 SV=1	[more]
A0A6J1FYD3	0.0e+00	98.74	DNA repair protein RAD16 OS=Cucurbita moschata OX=3662 GN=LOC111448500 PE=3 SV=1	[more]
A0A0A0LN53	0.0e+00	83.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416820 PE=3 SV=1	[more]
A0A5D3DZG8	0.0e+00	83.66	DNA repair protein RAD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C1J5	0.0e+00	83.66	DNA repair protein RAD16 OS=Cucumis melo OX=3656 GN=LOC103495970 PE=3 SV=1	[more]

BLAST of CmaCh20G006090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986252.1	0.0e+00	100.00	DNA repair protein RAD16 [Cucurbita maxima]	[more]
XP_022943925.1	0.0e+00	98.74	DNA repair protein RAD16 [Cucurbita moschata] >XP_022943926.1 DNA repair protein...	[more]
XP_023512492.1	0.0e+00	98.74	DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512493.1...	[more]
KAG7010739.1	0.0e+00	97.88	RAD16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038902046.1	0.0e+00	86.96	ATP-dependent helicase rhp16 [Benincasa hispida]	[more]

BLAST of CmaCh20G006090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05120.1	3.5e-283	59.93	Helicase protein with RING/U-box domain	[more]
AT1G02670.1	1.1e-148	40.69	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G20010.1	6.0e-89	29.32	SNF2 domain-containing protein / helicase domain-containing protein / zinc finge...	[more]
AT1G50410.1	1.0e-88	29.41	SNF2 domain-containing protein / helicase domain-containing protein / zinc finge...	[more]
AT5G22750.1	2.8e-86	30.43	DNA/RNA helicase protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 691..711
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	PANTHER	PTHR45626:SF33	SUBFAMILY NOT NAMED	coord: 711..870 coord: 107..349
None	No IPR available	PANTHER	PTHR45626	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	coord: 711..870
None	No IPR available	PANTHER	PTHR45626	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	coord: 107..349
None	No IPR available	PANTHER	PTHR45626:SF33	SUBFAMILY NOT NAMED	coord: 378..709
None	No IPR available	PANTHER	PTHR45626	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	coord: 378..709
None	No IPR available	CDD	cd18793	SF2_C_SNF	coord: 702..829 e-value: 8.11111E-52 score: 175.358
None	No IPR available	CDD	cd18008	DEXDc_SHPRH-like	coord: 162..520 e-value: 5.39746E-77 score: 248.356
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 612..664
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 735..818 e-value: 8.9E-15 score: 65.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 705..818 e-value: 2.5E-12 score: 47.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 700..864 score: 13.48661
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 158..466 e-value: 9.8E-24 score: 94.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 175..448 score: 15.318945
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 619..659 e-value: 6.4E-7 score: 39.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 619..660 score: 12.017182
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 327..538 e-value: 2.4E-24 score: 87.5
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 164..303 e-value: 5.4E-23 score: 83.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 614..690 e-value: 2.7E-12 score: 48.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 539..869 e-value: 7.3E-62 score: 211.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 117..450
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 393..872
IPR000330	SNF2, N-terminal	PFAM	PF00176	SNF2_N	coord: 177..595 e-value: 6.2E-51 score: 173.2
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 619..659 e-value: 4.7E-7 score: 29.6
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 634..643

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G006090.1	CmaCh20G006090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140658	ATP-dependent chromatin remodeler activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity