CmaCh20G006080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G006080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Dihydrolipoyllysine-residue succinyltransferase
Location	Cma_Chr20: 2840055 .. 2843387 (+)
RNA-Seq Expression	CmaCh20G006080
Synteny	CmaCh20G006080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTGGTTTTTGAGTTGGATATAAATGCTTCTCTTCCCTTTCGTACATTTCTTTCTAGTTATTGCGCTGTGCTCGATGCATTCGATTCACTTGCTCTGCAGGTATCTTCGTTATTTTATCTTCCTCGAAGTTTAGGATTAAATATGTTTGATGTTGCTGAGATCCGAGAGCTCCGAAAGCTTTTCCGTTTTTTCTTAGTTCGATTTATGTTTTGGAAAGTTTCGATCGAGGACGAAAAATACTCGTATATAAGATTCACATGTTTACTGCCTTCGAAAACTGTTGTATGAATAAAATGAAGAAAGTATAATGGCGATTGGAGATGAAAATTCCGAATATCTATCTTTCGTAAATTTTTTCGATTATGCAGAAATTGTACGGTTGGTTAAATGATATTTGTTTCGATTGTTCTCTCTGTTTTGTTCACTCCTGTTCTTTCGCGGCAGTGATTAGAAGCAATCTAACTGATCTAATATTGTTTGTGATGAAATTGTAACGCCTATTGTAATTTTGCTTCGAGCAGGTCAGATTTAAGGTGCGAACGAAATGAGTTTGCATTCACCGTATCGTCGCTTCTGCATTATGACGTACAATTGCTATCGTTGTCGTTGTTTAGTTGAAAATCATATGTTTTACGTTTTAGCGGAATGCGAGTAATCATATTTCCTCAGTTCTTGTAATTGGCGAACTAAGAGTCTGAGATCTCAATAACTAGGATATCTGTTCTCTGTATGTTTTACTCATTTCTGTGATGTTAGGATAGTCAGCGTACAAGGTTGGTCTACCAGCGTCAGCGACAACAAAGGCTTCAAAGAAGAGGTACCAAATTTCACATTGGCTATATTCTAAGATCCTTTCAGATTGTGGTTAGATCTGACTTGATTTACGAAATGTGACCGGAAATTTTGAAATAATATCGTTTTGATCTTCAACCATAATGGACATTTCGTATCTCTCTAAAATATTAAGGATAAAAGGACTCCTAAATGCCAGCTTGTATTAGGATTGGGGAAAACTTGTGCTCGTTATGGAAGAATAATAATGGTAATCGTCGTGATCATTCCATCCGCATCAGTTTTAGCTGAGCTATCGAACAGGATTTTACTTTAGCTCTAGAGTCCAGTTTGTTGTCTTGGCCTCTATATGTGAACATGAGATTACAGAAAGGCTCTTGGTATGAACACGGACATGCGCTCAAGCATGCACACACATTATGTGAACGTAGTTATATATTTACATGGTAATATTATATCATTGCGGACATTCTTTAATTGGAGATGACACTTTCTATTCTGAGCTCCAGCAATAGGCATTACTTAATAGGAAGGTTTTTCAACAAATTCAGAGTAACATCTTCGTTATCTGTGGGTGATTGCCGTCCTCTCATTTGTTGTACCTAATTCACTTAAATTTATCCATTTAGGTGGTGATGGTACGTTGCTCGATTATAAAAGCTCTAGGGCAATTCCAATCAAAATATATTGTGCAATCAAGTAGCAGATTGTTTTCTTATGATAATGGTAGAATTATTATAGAATACTTAACTTAGATTTTAGAATTTTATTATTCACGTGCTTTGATGCATGCTAGTTCAATCGAGTTTTAAATTGTTAGAAGTAAACTAACATTTTGCTTTGCAATTCTAGAAGCCCTAGTTCCTTTCACGGGCGAATTATGCTGGCTTCTGAATTCATGTTTAAAAATAATCTTATTTTGTGGAGTGGTGACAGTTTCGAAGTTGATGAGCCCATTTCTCAAATCGAGGCGACAAGGCTCTTTATTGTACCACTTGACTATGGTGAAGTTTTTCGTATTCCCACAAGGTCGCAGTGGACGTGAATCCAAAAGATGTGAATCTTAGTCGATTAGATTTTCTTCCATTTGCAATAAAATGTCTACTTTTTTCTTCAATACATCAAAGTAATCATAGTGATCTGTCTATTTCTCGTTATTCTCAAAGGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCTACTATTTCGAAATCGGGTGAATGGGTAGCTCAAGATGCTCAATTCGAAAAGGTTGAACTTCAGACAGCACTTCCAAAGCAGAGGGAAAATTATAAAAAAGAAATCCCTAAAGAAGCTTCATGTTCCAGGGCAAAACAAAGAACCGTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAGTAAGCGTTTTGTATTTACATTAATCTCAAGAATTATTTAGTCTAACTCAATGTGGCAAGCAACTGTTCCTTTTCCTCTTGTATTTGTTTGCAGATTCCTATGTCGAGACTAAAAAAACATGTCGCAACTCGCTTGAGGGATTCATAATACCTAGATATAACATTTCATGCTCCAGGTCAAAGAAAAAAGTAGACGAGTATTCATACCCATGTCTCCCTACATTATTGCTTTGTGATCAACAATGCTAAAATCTGAATGGGTTTTCTGAACTTGATTCCATTTTCAACTTTTTCTTGATAGTCTCCTGAGCATCATCAAGCATTATGGTTCAGGTTTCATTCCTAGTTGACTTTTATGATGCAGGACCATCATGATGAAGTTCTGATCTGATTATAAAGACGATTTTGTCGAAAAACATGCGGTGAAATTAAGATTTATGTCAGCGTTTGAAACAGGGAGTACCAAGTGAGTTCAAGCAAGTAAAACTTACCTATCATGAATGAAAATTTTGGAACTTTTGTTCTTTCATTTGTCTTGTTTCTCAGGACTTACCTATCATGATTCTTTCTCAGGGTCTTGTTTTGTTGTGGTACCCGTCAATCGCAATGCTGAAACAATGAACTTTGCTGAGATAGAGAAAGAGATCAATGTTTTGTTCGCATATCCATCGAGGTCGTGACTTCAATGCTACGCCATCCATCTTTAATAGGTAATTCGCTCTCTTGATATATGTTCAGAAATTTCAGTAAAACATAGACGGAATGATCTTGGGGAATCAGTGGGTGGCACGTGAAACAAAATTTACAACCTTAGAGGTGCATAAAAGGATATAGCTGTACATTAATTAAAGAAATATATATTTTAACAATACCAGGATATTTTTTAGCCTAATTTTTTACTAGACTATTAATGAATTGAAGGAAGATAAAAGTAAAAAGTGTTATAATGACAAAGCACTCTGTATTACCCGCATGCACAGCTGCCCATTGGCGGTGAGTAGGGATTTACCAGGGATTTACGGATAACTTCCATAATTATAGAGATTGAATTTGGTTTGGATTAGCATCGTG

mRNA sequence

TCTCTGGTTTTTGAGTTGGATATAAATGCTTCTCTTCCCTTTCGTACATTTCTTTCTAGTTATTGCGCTGTGCTCGATGCATTCGATTCACTTGCTCTGCAGGTCAGATTTAAGGTGCGAACGAAATGAGTTTGCATTCACCGTATCGTCGCTTCTGCATTATGACGATAGTCAGCGTACAAGGTTGGTCTACCAGCGTCAGCGACAACAAAGGCTTCAAAGAAGAGTTTCGAAGTTGATGAGCCCATTTCTCAAATCGAGGCGACAAGGCTCTTTATTGTACCACTTGACTATGGTGAAGTTTTTCGTATTCCCACAAGGTCGCAGTGGACGTGAATCCAAAAGATGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCTACTATTTCGAAATCGGGTGAATGGGTAGCTCAAGATGCTCAATTCGAAAAGGTTGAACTTCAGACAGCACTTCCAAAGCAGAGGGAAAATTATAAAAAAGAAATCCCTAAAGAAGCTTCATGTTCCAGGGCAAAACAAAGAACCGTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAATTCCTATGTCGAGACTAAAAAAACATGTCGCAACTCGCTTGAGGGATTCATAATACCTAGATATAACATTTCATGCTCCAGGACCATCATGATGAAGTTCTGATCTGATTATAAAGACGATTTTGTCGAAAAACATGCGGTGAAATTAAGATTTATGTCAGCGTTTGAAACAGGGAGTACCAAGGTCTTGTTTTGTTGTGGTACCCGTCAATCGCAATGCTGAAACAATGAACTTTGCTGAGATAGAGAAAGAGATCAATGTTTTGTTCGCATATCCATCGAGGTCGTGACTTCAATGCTACGCCATCCATCTTTAATAGGTAATTCGCTCTCTTGATATATGTTCAGAAATTTCAGTAAAACATAGACGGAATGATCTTGGGGAATCAGTGGGTGGCACGTGAAACAAAATTTACAACCTTAGAGGTGCATAAAAGGATATAGCTGTACATTAATTAAAGAAATATATATTTTAACAATACCAGGATATTTTTTAGCCTAATTTTTTACTAGACTATTAATGAATTGAAGGAAGATAAAAGTAAAAAGTGTTATAATGACAAAGCACTCTGTATTACCCGCATGCACAGCTGCCCATTGGCGGTGAGTAGGGATTTACCAGGGATTTACGGATAACTTCCATAATTATAGAGATTGAATTTGGTTTGGATTAGCATCGTG

Coding sequence (CDS)

ATGCTTCTCTTCCCTTTCGTACATTTCTTTCTAGTTATTGCGCTGTGCTCGATGCATTCGATTCACTTGCTCTGCAGGTCAGATTTAAGGTGCGAACGAAATGAGTTTGCATTCACCGTATCGTCGCTTCTGCATTATGACGATAGTCAGCGTACAAGGTTGGTCTACCAGCGTCAGCGACAACAAAGGCTTCAAAGAAGAGTTTCGAAGTTGATGAGCCCATTTCTCAAATCGAGGCGACAAGGCTCTTTATTGTACCACTTGACTATGGTGAAGTTTTTCGTATTCCCACAAGGTCGCAGTGGACGTGAATCCAAAAGATGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCTACTATTTCGAAATCGGGTGAATGGGTAGCTCAAGATGCTCAATTCGAAAAGGTTGAACTTCAGACAGCACTTCCAAAGCAGAGGGAAAATTATAAAAAAGAAATCCCTAAAGAAGCTTCATGTTCCAGGGCAAAACAAAGAACCGTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAATTCCTATGTCGAGACTAA

Protein sequence

MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD

Homology

[Close]

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL
Match: A0A6J1JDX8 (uncharacterized protein LOC111484139 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111484139 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.4e-61
Identity = 144/208 (69.23%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLC                       SQRTRLVYQRQR
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLC-----------------------SQRTRLVYQRQR 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNWCQLTAEEGET 120
           QQRLQR                                        R NWCQLTAEEGET
Sbjct: 61  QQRLQR----------------------------------------RGNWCQLTAEEGET 120

Query: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK 180
           SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK
Sbjct: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK 145

Query: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 209
           INCKNTFSSSETHTAQEPQLPPKDGKNE
Sbjct: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 145

[Close]

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL
Match: A0A6J1JGC9 (uncharacterized protein LOC111484139 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484139 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.5e-59
Identity = 139/214 (64.95%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ + 
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLCR-------------IVSVQGWSTSVSDNKGFKEE- 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQGRSGRESKRCNWCQLTAEEGE 120
                  V  +    +K+  Q    Y + +  + F +  G         NWCQLTAEEGE
Sbjct: 61  -------VVMVRCSIIKALGQFQSKYIVQSSSRLFSYDNG---------NWCQLTAEEGE 120

Query: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180
           TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL
Sbjct: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180

Query: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD 214
           KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD
Sbjct: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD 184

[Close]

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL
Match: A0A6J1JAY5 (uncharacterized protein LOC111484139 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484139 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.4e-55
Identity = 134/209 (64.11%), Postives = 147/209 (70.33%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ + 
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLCR-------------IVSVQGWSTSVSDNKGFKEE- 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQGRSGRESKRCNWCQLTAEEGE 120
                  V  +    +K+  Q    Y + +  + F +  G         NWCQLTAEEGE
Sbjct: 61  -------VVMVRCSIIKALGQFQSKYIVQSSSRLFSYDNG---------NWCQLTAEEGE 120

Query: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180
           TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL
Sbjct: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 179

Query: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNE 209
           KINCKNTFSSSETHTAQEPQLPPKDGKNE
Sbjct: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNE 179

[Close]

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL
Match: A0A6J1JFX9 (uncharacterized protein LOC111484139 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484139 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 8.0e-19
Identity = 77/177 (43.50%), Postives = 94/177 (53.11%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ + 
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLCR-------------IVSVQGWSTSVSDNKGFKEE- 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQGRSGRESKRCNWCQLTAEEGE 120
                  V  +    +K+  Q    Y + +  + F +  G         NWCQLTAEEGE
Sbjct: 61  -------VVMVRCSIIKALGQFQSKYIVQSSSRLFSYDNG---------NWCQLTAEEGE 120

Query: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRT 177
           TSKPSTRIATISKSGEWVAQDAQFEK + +  L + +            CSRA   T
Sbjct: 121 TSKPSTRIATISKSGEWVAQDAQFEKGKTKNRLSQNQLQKHLLFLGNPHCSRAPAST 147

[Close]

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL
Match: A0A5C7HGQ0 (Dihydrolipoyllysine-residue succinyltransferase OS=Acer yangbiense OX=1000413 GN=EZV62_020642 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-05
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 112 QLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSR 171
           QL A+EGET +P T+IA ISKS E  AQ A  EK   Q    +++E+ +K+IPK  +  R
Sbjct: 85  QLIAKEGETVEPGTKIAVISKSAEATAQPAPAEKAASQPPPAEKKESSEKQIPKAEATPR 144

Query: 172 AKQRTVSLKINCKNTFSSSETHTAQEPQLPPKD 205
              +  + K     + + S    A EPQLPPKD
Sbjct: 145 PPPKPTAQK-----SSTPSPKTMASEPQLPPKD 172

[Close]

BLAST of CmaCh20G006080 vs. NCBI nr
Match: XP_022986390.1 (uncharacterized protein LOC111484139 isoform X4 [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 144/208 (69.23%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLC                       SQRTRLVYQRQR
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLC-----------------------SQRTRLVYQRQR 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNWCQLTAEEGET 120
           QQRLQR                                        R NWCQLTAEEGET
Sbjct: 61  QQRLQR----------------------------------------RGNWCQLTAEEGET 120

Query: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK 180
           SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK
Sbjct: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK 145

Query: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 209
           INCKNTFSSSETHTAQEPQLPPKDGKNE
Sbjct: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 145

[Close]

BLAST of CmaCh20G006080 vs. NCBI nr
Match: XP_022986388.1 (uncharacterized protein LOC111484139 isoform X2 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 7.3e-59
Identity = 139/214 (64.95%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ + 
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLCR-------------IVSVQGWSTSVSDNKGFKEE- 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQGRSGRESKRCNWCQLTAEEGE 120
                  V  +    +K+  Q    Y + +  + F +  G         NWCQLTAEEGE
Sbjct: 61  -------VVMVRCSIIKALGQFQSKYIVQSSSRLFSYDNG---------NWCQLTAEEGE 120

Query: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180
           TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL
Sbjct: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180

Query: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD 214
           KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD
Sbjct: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD 184

[Close]

BLAST of CmaCh20G006080 vs. NCBI nr
Match: XP_022986385.1 (uncharacterized protein LOC111484139 isoform X1 [Cucurbita maxima] >XP_022986386.1 uncharacterized protein LOC111484139 isoform X1 [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 4.9e-55
Identity = 134/209 (64.11%), Postives = 147/209 (70.33%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ + 
Sbjct: 1   MLLFPFVHFFLVIALCSMHSIHLLCR-------------IVSVQGWSTSVSDNKGFKEE- 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQGRSGRESKRCNWCQLTAEEGE 120
                  V  +    +K+  Q    Y + +  + F +  G         NWCQLTAEEGE
Sbjct: 61  -------VVMVRCSIIKALGQFQSKYIVQSSSRLFSYDNG---------NWCQLTAEEGE 120

Query: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 180
           TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL
Sbjct: 121 TSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSL 179

Query: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNE 209
           KINCKNTFSSSETHTAQEPQLPPKDGKNE
Sbjct: 181 KINCKNTFSSSETHTAQEPQLPPKDGKNE 179

[Close]

BLAST of CmaCh20G006080 vs. NCBI nr
Match: KAG7010740.1 (hypothetical protein SDJN02_27536, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 9.0e-33
Identity = 107/208 (51.44%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFP  HFF     C++                         L   DSQRTRLVYQRQR
Sbjct: 1   MLLFPLAHFF--SCYCAV-------------------LNAFDSLALQDSQRTRLVYQRQR 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNWCQLTAEEGET 120
           QQRLQR                                        R NWCQLTAEEGET
Sbjct: 61  QQRLQR----------------------------------------RGNWCQLTAEEGET 120

Query: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLK 180
           SKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLK
Sbjct: 121 SKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLK 142

Query: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 209
           INCKNTFSSSETHTAQEPQLPPKDGKNE
Sbjct: 181 INCKNTFSSSETHTAQEPQLPPKDGKNE 142

[Close]

BLAST of CmaCh20G006080 vs. NCBI nr
Match: XP_023512503.1 (uncharacterized protein LOC111777232 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-22
Identity = 85/175 (48.57%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 1   MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQR 60
           MLLFPF HFF   + C++                         L   DSQRTRLVYQRQR
Sbjct: 1   MLLFPFAHFF--SSYCAV-------------------LDAFDSLALQDSQRTRLVYQRQR 60

Query: 61  QQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNWCQLTAEEGET 120
           QQRLQRR S                                        WCQLTAEEGET
Sbjct: 61  QQRLQRRGS----------------------------------------WCQLTAEEGET 114

Query: 121 SKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQR 176
           +KP TRIATIS SGE VAQDA FEKVELQTA PKQREN KKEIPKEAS  + K +
Sbjct: 121 AKPGTRIATISPSGEGVAQDAPFEKVELQTAFPKQRENDKKEIPKEASIFQGKTK 114

The following BLAST results are available for this feature:

BLAST of CmaCh20G006080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G006080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDX8	8.4e-61	69.23	uncharacterized protein LOC111484139 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JGC9	3.5e-59	64.95	uncharacterized protein LOC111484139 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JAY5	2.4e-55	64.11	uncharacterized protein LOC111484139 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JFX9	8.0e-19	43.50	uncharacterized protein LOC111484139 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5C7HGQ0	3.8e-05	41.94	Dihydrolipoyllysine-residue succinyltransferase OS=Acer yangbiense OX=1000413 GN...	[more]

BLAST of CmaCh20G006080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986390.1	1.7e-60	69.23	uncharacterized protein LOC111484139 isoform X4 [Cucurbita maxima]	[more]
XP_022986388.1	7.3e-59	64.95	uncharacterized protein LOC111484139 isoform X2 [Cucurbita maxima]	[more]
XP_022986385.1	4.9e-55	64.11	uncharacterized protein LOC111484139 isoform X1 [Cucurbita maxima] >XP_022986386...	[more]
KAG7010740.1	9.0e-33	51.44	hypothetical protein SDJN02_27536, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023512503.1	2.5e-22	48.57	uncharacterized protein LOC111777232 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh20G006080 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G006080.1	CmaCh20G006080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity