CmaCh20G005680 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G005680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Location	Cma_Chr20: 2737501 .. 2738180 (-)
RNA-Seq Expression	CmaCh20G005680
Synteny	CmaCh20G005680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTTGGAAACCCTTCACACTCAAAGTAGGGTTTTAGCTTTAACCCTCTGCAGCCAAGAAGCAAGAGTCGAGTTCTTGTTGTTGTTGATAGTCTGTACCAAGAACAGACTTTCAGAATCTATCATTTCTTCAGATTAACAATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTTGTCATCAAGTACTCCCTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGCGTTGCTTAATGCTTTTGCGTCCATTTGAAGTGCCAAAGATTCTGTATCTAGAGATCTTGGAGTTTCTTTTCTCCAAAAGGAGTCAACGAAAACGGTGTTCCATCTTCCAATTTATTTCTCTCAGTTTTTTAGTTGCGATACTAAGCTCTAGAACTTTGAAATGACAACAAGATAGCCTTTCTCCTTTACCTTGTTTTTAAATAACGAGCTTGGCAAAACGCTTCAATAAATTAGGTAATGTATTTTGCCTGAAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCATCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAA

mRNA sequence

AGAAAGTTGGAAACCCTTCACACTCAAAGTAGGGTTTTAGCTTTAACCCTCTGCAGCCAAGAAGCAAGAGTCGAGTTCTTGTTGTTGTTGATAGTCTGTACCAAGAACAGACTTTCAGAATCTATCATTTCTTCAGATTAACAATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTTGTCATCAAGTACTCCCTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCATCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAA

Coding sequence (CDS)

ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTTGTCATCAAGTACTCCCTTTCGCATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCAGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCATCGTCTTCAGCTTTGATGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAA

Protein sequence

MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA

Homology

[Close]

BLAST of CmaCh20G005680 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-08
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 5  GARSVFRSFSGSARRAAAQIGSQAKLSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESM 64
          GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES+
Sbjct: 9  GARSMLR--AASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESL 68

Query: 65 MPFHSASSSALMTSMLSVSRSSCGWLPE 91
          +P+HSA++SALMTS LS+S  + GWL +
Sbjct: 69 LPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL
Match: A0A6J1JFZ5 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-39
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 93
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEG+
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGS 92

[Close]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL
Match: A0A6J1J7G1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.7e-39
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEG
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEG 91

[Close]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL
Match: A0A6J1JGE8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484153 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.3e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 91
          SMMPFHSASSSALMTSMLSVSRSSCGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90

[Close]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL
Match: A0A6J1FX39 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 93
          SMMPFHSASSSALMTSMLSVSRS CGWLPEG+
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEGS 92

[Close]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL
Match: A0A6J1FS03 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448284 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37
Identity = 89/91 (97.80%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          SMMPFHSASSSALMTSMLSVSRS CGWLPEG
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEG 91

[Close]

BLAST of CmaCh20G005680 vs. NCBI nr
Match: XP_022986409.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita maxima] >XP_022986410.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 93
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEG+
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGS 92

[Close]

BLAST of CmaCh20G005680 vs. NCBI nr
Match: XP_022986407.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEG
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEG 91

[Close]

BLAST of CmaCh20G005680 vs. NCBI nr
Match: KAG7010763.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 93
          SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 92

[Close]

BLAST of CmaCh20G005680 vs. NCBI nr
Match: XP_022986408.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 8.9e-38
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 91
          SMMPFHSASSSALMTSMLSVSRSSCGWLPE
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPE 90

[Close]

BLAST of CmaCh20G005680 vs. NCBI nr
Match: XP_022943543.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita moschata] >XP_022943544.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60
          MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLE
Sbjct: 1  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLE 60

Query: 61 SMMPFHSASSSALMTSMLSVSRSSCGWLPEGA 93
          SMMPFHSASSSALMTSMLSVSRS CGWLPEG+
Sbjct: 61 SMMPFHSASSSALMTSMLSVSRSCCGWLPEGS 92

[Close]

BLAST of CmaCh20G005680 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---LSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K    S+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          +P+H+A++SAL+ SMLSVSR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of CmaCh20G005680 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---LSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K    S+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          +P+H+A++SAL+ SMLSVSR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of CmaCh20G005680 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---LSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K    S+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWLPEG 92
          +P+H+A++SAL+ SMLSVSR   GW+ +G
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of CmaCh20G005680 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 6  ARSVFRSFSGSARRAAAQIGSQAKLSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPF 65
          ARSVFRS  G A  AA +       S+ + F++    PLSHR FR   E+S C+E+M+P+
Sbjct: 4  ARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPY 63

Query: 66 HSASSSALMTSMLSVSRSSCGWLPEG 92
          H+A++SAL+ SMLSVS  S  W  +G
Sbjct: 64 HTATASALLNSMLSVSGRSI-WTFQG 88

[Close]

BLAST of CmaCh20G005680 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 6  ARSVFRSFSGSARRAAAQIGSQAK---LSSSTPFRMATTKPLSHRTFRCAAEMSFCLESM 65
          ARSVFRS +  A   A +  +  K    S+ T FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSASSSALMTSMLSVSRSSCGWL 89
          +P+H+A++SAL+ SMLSVSR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

The following BLAST results are available for this feature:

BLAST of CmaCh20G005680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	7.7e-08	44.32	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmaCh20G005680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFZ5	6.7e-39	98.91	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]
A0A6J1J7G1	8.7e-39	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A6J1JGE8	4.3e-38	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A6J1FX39	1.3e-37	96.74	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]
A0A6J1FS03	1.6e-37	97.80	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]

BLAST of CmaCh20G005680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986409.1	1.4e-38	98.91	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]
XP_022986407.1	1.8e-38	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
KAG7010763.1	3.1e-38	98.91	Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurb...	[more]
XP_022986408.1	8.9e-38	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
XP_022943543.1	2.6e-37	96.74	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 ...	[more]

BLAST of CmaCh20G005680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28395.2	4.4e-11	46.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	4.4e-11	46.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	4.4e-11	46.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G33847.2	1.7e-10	46.51	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT1G28395.4	2.2e-10	46.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..91
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G005680.1	CmaCh20G005680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy