CmaCh20G005640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G005640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BPTI/Kunitz domain-containing protein 2-like isoform X2
Location	Cma_Chr20: 2725162 .. 2726107 (-)
RNA-Seq Expression	CmaCh20G005640
Synteny	CmaCh20G005640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACCAAAACATTCATAACATATCCATCCCTGTTTCCCACCATATAAATACACCCCCATCTTGTTCCAAGATTACACCATCTTTTCTTTTTCTTTCGGAACTGAAGAATACAATGAAGTCCAAAGCTGTTGTGGTTGCGTGTCTGTTGCTGTTCTTGTTGGTCTCTATCTCTGTTTCTGCGTCGGCAGTGTCCGAAGGAAGCCAACAGCAGCCTGACAAAGCTGAAGGTATTGTAATTAATTGCGCCAATAATGATCAAATAAATTTAAATCTATAAGTATTATTGATAATTGGTTGTTGGGTTGTGAATTAATTAACGTAGGAGCAAATGCAAATACCGTGGAAGAGTCAAAGCTACACTGCTACCACGGATGCTGCAAACGGTATGGGTATCGCTGCGTGAAATGCTGCGGTAGCGCTGCAGAAGCGCAGGCCAATACCAATGCCAACACCAATGGTGAGGCGCATCAGGAGCGTGCAGAAGTCGAAGCAGCCGCGCATAGATGGGGAGGCCACGGCGGATGGCGAGGTGGAGGCGGACATAGAGGCGGACGGGGCGGCGGTGGAGGTGGGAAGTGATTAGTGTGTGTGTGTGTGTAAGTGTGGTGGTACAAAGAATAAGGTAGGAGGGAAGGAAAATGAATAAATAATTAAGAATGAAGGGTCATAGTGCCCTACAATAGAAGGGTTAGATCCCTTCACTGCTACGCTACTCTTACATGTGAAATATATATATATATATATATTATGTCTTTCGTGTTACACATTGCTAGATCTACTAGATTTACTAGCCGTGGATTTAAACGATTACCAACAGTATTAGAGTTTCGAGTTAGAAACTGTGTTTCAACCATCAAAGGACCCCAGAATAAACGGTTACCAACTGTGTTTCCATTTTTAAAAGTTTTTATATGAATATTATGTTAAGGATGAAAGTCTCACGGG

mRNA sequence

TCAACCAAAACATTCATAACATATCCATCCCTGTTTCCCACCATATAAATACACCCCCATCTTGTTCCAAGATTACACCATCTTTTCTTTTTCTTTCGGAACTGAAGAATACAATGAAGTCCAAAGCTGTTGTGGTTGCGTGTCTGTTGCTGTTCTTGTTGGTCTCTATCTCTGTTTCTGCGTCGGCAGTGTCCGAAGGAAGCCAACAGCAGCCTGACAAAGCTGAAGGAGCAAATGCAAATACCGTGGAAGAGTCAAAGCTACACTGCTACCACGGATGCTGCAAACGGTATGGGTATCGCTGCGTGAAATGCTGCGGTAGCGCTGCAGAAGCGCAGGCCAATACCAATGCCAACACCAATGGTGAGGCGCATCAGGAGCGTGCAGAAGTCGAAGCAGCCGCGCATAGATGGGGAGGCCACGGCGGATGGCGAGGTGGAGGCGGACATAGAGGCGGACGGGGCGGCGGTGGAGGTGGGAAGTGATTAGTGTGTGTGTGTGTGTAAGTGTGGTGGTACAAAGAATAAGGTAGGAGGGAAGGAAAATGAATAAATAATTAAGAATGAAGGGTCATAGTGCCCTACAATAGAAGGGTTAGATCCCTTCACTGCTACGCTACTCTTACATGTGAAATATATATATATATATATATTATGTCTTTCGTGTTACACATTGCTAGATCTACTAGATTTACTAGCCGTGGATTTAAACGATTACCAACAGTATTAGAGTTTCGAGTTAGAAACTGTGTTTCAACCATCAAAGGACCCCAGAATAAACGGTTACCAACTGTGTTTCCATTTTTAAAAGTTTTTATATGAATATTATGTTAAGGATGAAAGTCTCACGGG

Coding sequence (CDS)

ATGAAGTCCAAAGCTGTTGTGGTTGCGTGTCTGTTGCTGTTCTTGTTGGTCTCTATCTCTGTTTCTGCGTCGGCAGTGTCCGAAGGAAGCCAACAGCAGCCTGACAAAGCTGAAGGAGCAAATGCAAATACCGTGGAAGAGTCAAAGCTACACTGCTACCACGGATGCTGCAAACGGTATGGGTATCGCTGCGTGAAATGCTGCGGTAGCGCTGCAGAAGCGCAGGCCAATACCAATGCCAACACCAATGGTGAGGCGCATCAGGAGCGTGCAGAAGTCGAAGCAGCCGCGCATAGATGGGGAGGCCACGGCGGATGGCGAGGTGGAGGCGGACATAGAGGCGGACGGGGCGGCGGTGGAGGTGGGAAGTGA

Protein sequence

MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRYGYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGGGGK

Homology

[Close]

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL
Match: A0A6J1JB01 (CYC02 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484148 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.6e-56
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120
           GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120

Query: 121 GGK 124
           GGK
Sbjct: 121 GGK 123

[Close]

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL
Match: A0A6J1FYL2 (CYC02 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448800 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 118/122 (96.72%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASA SEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAASEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120
           GYRCVKCCGSAAEAQANTNANTNGEA QERAEVEAAAHRWGGHGGWRGGGGH GG GGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRGGGGHGGGWGGGG 120

Query: 121 GG 123
           GG
Sbjct: 121 GG 122

[Close]

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL
Match: A0A5D3BV93 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00080 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGAN-ANTVEESKLHCYHGCCKR 60
           M SKAVV ACLLL +   ++++A    EG+Q+QP  A+G N    VEESK+ CYHGCC+ 
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIAA----EGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRY 60

Query: 61  YGYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRG------GGGHR 120
           YG+ CV+CCGS AEAQ +  A  N  A +E  EVE     WGGHGGW G      GGG R
Sbjct: 61  YGHDCVRCCGSLAEAQ-DAAAAANAAAEEEN-EVEVTPQGWGGHGGWGGGGRSGWGGGGR 120

Query: 121 GGRGGGGGG 123
           GGRGGGG G
Sbjct: 121 GGRGGGGRG 123

[Close]

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL
Match: A0A1S3C295 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGAN-ANTVEESKLHCYHGCCKR 60
           M SKAVV ACLLL +   ++++A    EG+Q+QP  A+G N    VEESK+ CYHGCC+ 
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIAA----EGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRY 60

Query: 61  YGYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRG------GGGHR 120
           YG+ CV+CCGS AEAQ +  A  N  A +E  EVE     WGGHGGW G      GGG R
Sbjct: 61  YGHDCVRCCGSLAEAQ-DAAAAANAAAEEEN-EVEVTPQGWGGHGGWGGGGRSGWGGGGR 120

Query: 121 GGRGGGGGG 123
           GGRGGGG G
Sbjct: 121 GGRGGGGRG 123

[Close]

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL
Match: A0A5A7UI77 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00550 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.3e-17
Identity = 68/123 (55.28%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGAN-ANTVEESKLHCYHGCCKR 60
           M SKAVV ACLLL +   ++++A    EG+Q+QP  A+G N    VEESK+ CYHGCC+ 
Sbjct: 1   MNSKAVVFACLLLLVSAVVAIAA----EGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRY 60

Query: 61  YGYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGG 120
           YG+ CV+CCGS AEAQ +  A  N  A +E  EVE     WGGHGGW  GGG RGG GGG
Sbjct: 61  YGHDCVRCCGSLAEAQ-DAAAAANAAAEEEN-EVEVTPQGWGGHGGW--GGGGRGGWGGG 115

Query: 121 GGG 123
           G G
Sbjct: 121 GRG 115

[Close]

BLAST of CmaCh20G005640 vs. NCBI nr
Match: XP_022986401.1 (CYC02 protein-like [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120
           GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120

Query: 121 GGK 124
           GGK
Sbjct: 121 GGK 123

[Close]

BLAST of CmaCh20G005640 vs. NCBI nr
Match: XP_022944320.1 (CYC02 protein-like [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52
Identity = 118/122 (96.72%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASA SEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAASEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120
           GYRCVKCCGSAAEAQANTNANTNGEA QERAEVEAAAHRWGGHGGWRGGGGH GG GGGG
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRGGGGHGGGWGGGG 120

Query: 121 GG 123
           GG
Sbjct: 121 GG 122

[Close]

BLAST of CmaCh20G005640 vs. NCBI nr
Match: XP_023513181.1 (cold and drought-regulated protein CORA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.2 bits (544), Expect = 6.5e-52
Identity = 118/122 (96.72%), Postives = 118/122 (96.72%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGGRGGGG 120
           GYRCVKCCGSAAEAQANTNANTNGEA QERAEVEAAAHRWGGHGGWRGGGGH GG GGG 
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRGGGGHGGGHGGGH 120

Query: 121 GG 123
           GG
Sbjct: 121 GG 122

[Close]

BLAST of CmaCh20G005640 vs. NCBI nr
Match: KAG6570923.1 (hypothetical protein SDJN03_29838, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY
Sbjct: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60

Query: 61  GYRCVKCCGSAAEAQANTNANTNGEAHQERAEVEAAAHRWGGHGGWRG----GGGHRGGR 120
           GYRCVKCCGSAAEAQANTNANTNGEA QERAEVEAAAHRWGGHGGWRG    GGGHRGG 
Sbjct: 61  GYRCVKCCGSAAEAQANTNANTNGEAQQERAEVEAAAHRWGGHGGWRGGGGHGGGHRGGW 120

Query: 121 GGGGGG 123
           GGGGGG
Sbjct: 121 GGGGGG 126

[Close]

BLAST of CmaCh20G005640 vs. NCBI nr
Match: XP_038902766.1 (CYC02 protein-like isoform X1 [Benincasa hispida])

HSP 1 Score: 104.0 bits (258), Expect = 9.5e-19
Identity = 71/127 (55.91%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 1   MKSKAVVVACLLLFLLVSISVSASAVSEGSQQQPDKAEGANANTVEESKLHCYHGCCKRY 60
           MKSKAVV  CLL  +L  +     A++EG+Q+QP  A+G+N N VEESKL CYHGCC  Y
Sbjct: 1   MKSKAVVFVCLLFLILAVL-----AIAEGNQEQPQNAKGSNENRVEESKLRCYHGCCHYY 60

Query: 61  GYRCVKCCGSAAEAQ-----ANTNANTNGEAHQERAEVEAAAHRWGGHGGWRGGGGHRGG 120
           GY CVKCC + AEAQ     A  N N N  A  E  ++EA  H   GHGG RGG G  GG
Sbjct: 61  GYNCVKCCRNLAEAQAAAAAAAANNNNNNNAAAEERDMEAVPHGGRGHGGHRGGWG--GG 120

Query: 121 RGGGGGG 123
           RGGGGGG
Sbjct: 121 RGGGGGG 120

The following BLAST results are available for this feature:

BLAST of CmaCh20G005640 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G005640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JB01	3.6e-56	100.00	CYC02 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484148 PE=4 SV=1	[more]
A0A6J1FYL2	2.4e-52	96.72	CYC02 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448800 PE=4 SV=1	[more]
A0A5D3BV93	1.5e-17	54.26	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. mak...	[more]
A0A1S3C295	1.5e-17	54.26	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UI77	4.3e-17	55.28	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. mak...	[more]

BLAST of CmaCh20G005640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986401.1	7.4e-56	100.00	CYC02 protein-like [Cucurbita maxima]	[more]
XP_022944320.1	5.0e-52	96.72	CYC02 protein-like [Cucurbita moschata]	[more]
XP_023513181.1	6.5e-52	96.72	cold and drought-regulated protein CORA-like [Cucurbita pepo subsp. pepo]	[more]
KAG6570923.1	1.5e-51	95.24	hypothetical protein SDJN03_29838, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038902766.1	9.5e-19	55.91	CYC02 protein-like isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh20G005640 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G005640.1	CmaCh20G005640.1	mRNA