CmaCh20G004870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G004870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr20: 2361657 .. 2364293 (-)
RNA-Seq Expression	CmaCh20G004870
Synteny	CmaCh20G004870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGATCAACGACTATTGTTATAAACCCTTCGTCGCCGGTCTGCGCTTGCCGTTTCGATCGAAGAACTAACGACCTATGATTCTCCGATTCGTCCCTTCCGGTTGGATAATTCCATAATCAAGTGAACCAGAGAAGAATTTTGAATCTTAGAATTATTGGATTCGTTTGATTGTTACTGTTTTTTTTATCTAGGGCGAAAAACGGCAGGATCAGAGGCTGATTTCGGTGGATACCTGGGATGTGATCGACGAATTAAGGAGTATATGTTCGAAGGAGAAATGAATTGATTGCATTGTTGGGAGAGATGAGCGCGAGCTCTGCGTCAATTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTTGCACCGATTGTGAGTATGAAGAACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCCCTTCGCTGCTTCCAGTTAGGGTTCGCCTCTGCTGCTTTTGGTATCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGGTGATTTTTCCTTAACTTGATCAAAAAAAAAAAATTCTTTAATTCTCACGAATTCTTATTCAAACTTGTTTGATAGCATACTCATAAACGCTGATGAAGGAAGAACTATAATCGTTCTTCAAATTTGACTTTACAAGGCACTATAATCGTCCCCTGAATCTAATACGCTACTAAATTTCCAGTATTTTATTAGTTCATTTCTACGTGCGTTCAGTGTTGTGAATTAATAACTATGCAGTTTTTTTTAGCCTAAATTCTTCAATTATCACGTCTGAATGAGCTTAACTGTTGAGGGCTTTGCATTTTCTACTGGATAACAATGGCTGATACACTCCATGTTTTTCTTTGCTTCAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGGTAAGTTCGTTTAACACCTAAATCCATCTGAAACCAATTGGCTCGTTGAAATGCTTTTACAATCTTCTTCTGTTTGTCCATTTTAACTTCTCATGTATCAAACATTTCCTATCAATGTCTGTCTGAGATCCCACATTGATGGGAGAGAGGAACGAATGCTAGCAAGGACGTTGGGTTCCGAAGGGAGTGGATTGTGAGATTCCATAGTGGTTGGAGAGGGAAGCAAAACATTCTTTTATAAGGGTGTGGAAACTTCTCTCTAGTAAATGCGTTTTAAAAACCTTGAGGGGAAGCTTGAAATGGAAAACTCAAATAGGACAACATCTGTTAGTGATGGGTTTGGGCTGTTAGAGTCTACAAAAAAACCTTGAGGGGAAGCCCGAATGGGAACACCTAAAGAGAACAATATCTACTAGCGGTGAGCTTGGGCTGTTAGAGTCTGCGAAAAACCTTGAGGAGAAGCCCGAAAGGGAAAACCTAAAGAAAACAATATCTGCTAGCGATGGGCTTGGGCTGTTACAGTCTGCGAAAAACCTTGAGGGGAAGCCCGAAAGAGAAAACCTAAAGAGAACAATATCTATTACCGGTGGATTTAGGTTGTTAGAATCTGCGAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAACCTAACGAGAACACTATCTACTAGTGGTGAGCTTGGACTGTTACAGTCTGCGAAGAATCTTGAGGGGAAGCCCGAAAGGGAAAATTTAAAGACAATATCTGCTAGTGGTGGGCTTGAGCAGTTAAAGATAGTCAAAACGAAGCTACTGATTACCAATGTTGCTAAGTATCTGAGAACTGTTGTCTTCTGACCCATGTTGATAATTTTATCATCATCACAACCATCAAATTTTGAGTACATGGGGCTTGCTTGCTATGTCGGTTATAAACAGTGAAATAGTTGGCTCTCTTGTCTCCTCCTACAGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTCGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGGTAACTCGACCAAACATCAGTAAATACCCCCTTCCCCTTCCCCTTCCCCTTGCATTCATCTTTATTTGTTCCTTCCTACCGTCAGTTTTGTTGGGATTCTACACTTCATTTACTGAAACCTTTACATTTTCAAATACTATATATGATATTAGTTTGATGTTCTTCATTGTTTATGATACTATTCTTGGAGGAATGTAGAATCCAATGCTGCTGTCTTAAAAAAAGGTGGATTTTTTGTGTCGCTTCCTCCGGATGTCCTGTGCACTAATTGAAAATACAAACGTTTTGTCATTATCTCTCGTGTGTATTATGGGAAAGAATCATTTACCCATTGTGAGCTTCATAAGCGTACATGTTTCTTAGTCTTGGATTGAACAGAACGACATTCTTCTCGTTGTGGCCTTATTAGGTGGAATATTGTGAAACTCTGTCGAGTAAAGGACTACATGTCAACTATTGCTAAGATATATTCATAATGGTCTAGTCTTTCA

mRNA sequence

CCGATCAACGACTATTGTTATAAACCCTTCGTCGCCGGTCTGCGCTTGCCGTTTCGATCGAAGAACTAACGACCTATGATTCTCCGATTCGTCCCTTCCGGTTGGATAATTCCATAATCAAGTGAACCAGAGAAGAATTTTGAATCTTAGAATTATTGGATTCGTTTGATTGTTACTGTTTTTTTTATCTAGGGCGAAAAACGGCAGGATCAGAGGCTGATTTCGGTGGATACCTGGGATGTGATCGACGAATTAAGGAGTATATGTTCGAAGGAGAAATGAATTGATTGCATTGTTGGGAGAGATGAGCGCGAGCTCTGCGTCAATTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTTGCACCGATTGTGAGTATGAAGAACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCCCTTCGCTGCTTCCAGTTAGGGTTCGCCTCTGCTGCTTTTGGTATCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTCGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGAAAGAATCCAATGCTGCTGTCTTAAAAAAAGGTGGATTTTTTGTGTCGCTTCCTCCGGATGTCCTGTGCACTAATTGAAAATACAAACGTTTTGTCATTATCTCTCGTGTGTATTATGGGAAAGAATCATTTACCCATTGTGAGCTTCATAAGCGTACATGTTTCTTAGTCTTGGATTGAACAGAACGACATTCTTCTCGTTGTGGCCTTATTAGGTGGAATATTGTGAAACTCTGTCGAGTAAAGGACTACATGTCAACTATTGCTAAGATATATTCATAATGGTCTAGTCTTTCA

Coding sequence (CDS)

ATGAGCGCGAGCTCTGCGTCAATTCATCCTGTGGAGGAAACACCGGCGACCGATGTCGGAGACGTTGCACCGATTGTGAGTATGAAGAACATAGAGGGCATGCCCGGCACTCGCGGTGGTCTCGCCCTTCGCTGCTTCCAGTTAGGGTTCGCCTCTGCTGCTTTTGGTATCATGGCCGCCTCCAGCGACTTCGCTTCTGTCTCTGCATTTAGCTACCTTGTCGCAGCTGCCGGTTTGCAGGGCTTATGGAGTTTTTTCCTAGCAGTTATTGACATTTATGCTCTTTTAGTGAAGCGGAACTTGCATAATCGTCCAATTGTTACTTTTTTTGCTGTAGGTGATGGGATCACCACCACGCTCACATTTGCAGCAGCATGTGCTTGTGCGGGCATCACAGTCCTAATAGACAACGACCTCGACCTTTGTTCGGTGAACAAGTGTGTGCAGCTTCAATCAGCAACTGCAATGGCATTCCTCTGCTGGCTCACCACATTGCCTTCATTTTTCTTCAACTTCTGGTCACTTGCATCAAGATGA

Protein sequence

MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAASSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR

Homology

[Close]

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.7e-54
Identity = 113/180 (62.78%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MSASSASIHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIM 60
           M+ S AS+HPVE+ P  AT+V +  P V M ++EGMPGT  GLALR FQ  FA+AA  +M
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITT 120
           A++SDF SV+AF YLVAA GLQ LWS  LA++D+YA++VKR+L NR +V+ FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ W   LPSF FNFWSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.0e-50
Identity = 107/177 (60.45%), Postives = 127/177 (71.75%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M AS  ++HPVE  P  D  +    V MK++ GMPGT GGL LR  Q  FA+ A  +MA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           ++DF SV++F +LVAAA LQ LWSF LA++DIYALLVKR L NR  V  FA+GDGIT  L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLAS 178
           TF+AACA +GITVLIDNDLDLCS N C   +SATAMAFL W    PSF  NFWS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.9e-48
Identity = 103/178 (57.87%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M AS  ++HPVE  P TD  +    V MK++ GMPGT GGL LR  Q  FA  A  +MA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           +SDF SV+AF YLVAA  +Q LWSF LA++DIYALLVKR L NR  V  FA+GDGIT  L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TF AAC+ AGITVLIDNDL++C+ N C   ++ATA+AF+ W    PSF  NFWS+A+R
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 108/178 (60.67%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  ++HPV E P TDV   AP V MK+ +GMPGT GGLALR  Q  FA  AF IM +
Sbjct: 1   MNPSHPAVHPV-EAPPTDVHH-APRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLS 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           + DF++V+AF YLVAA  LQ LWS  LAVID YALLVKR+L N  +V+ F VGDG+T TL
Sbjct: 61  TDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACA AGITVLI NDL  C  N C + ++ATAMAFL W    PSF   FW LASR
Sbjct: 121 TFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot
Match: P0DI27 (CASP-like protein 5A1 OS=Pteridium aquilinum subsp. aquilinum OX=104588 GN=PtaqContig9166 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.4e-44
Identity = 99/178 (55.62%), Postives = 123/178 (69.10%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M  S  ++HPV   P   + +    V MK+ +GMPGT GGLALR  QLGFA  +F IM +
Sbjct: 1   MEVSHPAVHPVAVPPV--LTEPPARVRMKDYQGMPGTLGGLALRLGQLGFAVLSFSIMVS 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           + DF+ V+AF YLVAA  LQ LWS   AV+DIYAL V+R+LH+  +V  FAVGDG+T+TL
Sbjct: 61  TPDFSQVTAFCYLVAATVLQTLWSSITAVVDIYALSVRRSLHHSLLVGLFAVGDGVTSTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACA AGITVLIDNDLD C  N C + ++A AMAFL W+   PSF   FWS  ++
Sbjct: 121 TFAAACATAGITVLIDNDLDECGQNHCGRFEAAAAMAFLSWIMAAPSFLLAFWSFGNK 176

[Close]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL
Match: A0A6J1JE54 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483628 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA
Sbjct: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL
Match: A0A6J1FWR8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89
Identity = 174/178 (97.75%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           MSASSAS+HPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFA+AAFG+MAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDFASVSAFSYLVAAAGLQGLWSFFLAV+DIYALLVKRNLHNRPIVTFFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL
Match: A0A1S3CKE0 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.0e-77
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  S+HPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF +MAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           S DF SVSAFSYLVAAA LQGLWSF LA+IDIYALLVKR L NRPIV+FFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL
Match: A0A5D3CR88 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00140 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.0e-77
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  S+HPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF +MAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           S DF SVSAFSYLVAAA LQGLWSF LA+IDIYALLVKR L NRPIV+FFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL
Match: A0A0A0KAS5 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 149/178 (83.71%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  S+HPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF +MAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAIAAFSVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           S DF+SVSAFSYLVAAA LQG+WSF LA+ID YALLVKR L NR IV+FFAVGDGITTTL
Sbjct: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDTYALLVKRTLQNRSIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. NCBI nr
Match: XP_022985617.1 (CASP-like protein 5A2 [Cucurbita maxima] >XP_022985618.1 CASP-like protein 5A2 [Cucurbita maxima] >XP_022985619.1 CASP-like protein 5A2 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA
Sbjct: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. NCBI nr
Match: XP_023512454.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010631.1 CASP-like protein 5A2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           MSASSAS+HPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFA+AAFG+MAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. NCBI nr
Match: XP_022943338.1 (CASP-like protein 5A2 [Cucurbita moschata])

HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 174/178 (97.75%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           MSASSAS+HPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFA+AAFG+MAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDFASVSAFSYLVAAAGLQGLWSFFLAV+DIYALLVKRNLHNRPIVTFFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. NCBI nr
Match: XP_038900719.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  S+HPVEETP TDVGDVAP+V MK+IEGMPGTRGGLALR  QLGFA AAF IMAA
Sbjct: 1   MNGSHGSVHPVEETPTTDVGDVAPMVRMKDIEGMPGTRGGLALRGIQLGFAVAAFAIMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           SSDF SVSAFSYLVAAA LQGLWSF LAVIDIYALLVKR LHNRPIV+FFAVGDGITTTL
Sbjct: 61  SSDFPSVSAFSYLVAAASLQGLWSFALAVIDIYALLVKRTLHNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQ QSATAMAFLCW +TLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQFQSATAMAFLCWFSTLPSFFFNYWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. NCBI nr
Match: XP_008463948.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0035346.1 CASP-like protein 5A2 [Cucumis melo var. makuwa] >TYK14291.1 CASP-like protein 5A2 [Cucumis melo var. makuwa])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60
           M+ S  S+HPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF +MAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120
           S DF SVSAFSYLVAAA LQGLWSF LA+IDIYALLVKR L NRPIV+FFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of CmaCh20G004870 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 212.2 bits (539), Expect = 3.3e-55
Identity = 113/180 (62.78%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MSASSASIHPVEETP--ATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIM 60
           M+ S AS+HPVE+ P  AT+V +  P V M ++EGMPGT  GLALR FQ  FA+AA  +M
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITT 120
           A++SDF SV+AF YLVAA GLQ LWS  LA++D+YA++VKR+L NR +V+ FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ W   LPSF FNFWSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of CmaCh20G004870 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 95/179 (53.07%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 1   MSASSASIHPVEETP-ATDVGDV-APIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIM 60
           M+ S  +IHPV+  P A   G +  P V MK+++GMPGT GGL LR  Q   A  +  +M
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  AASSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITT 120
             +SDF S +AF  LV A  LQ LWS  L +ID YALLV+R+L N  +V  F +GDG+T+
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLAS 178
           TLTFAAA A AGITVLI NDL  C+VN C + ++ATAMAF+ W    PSF  NFWSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of CmaCh20G004870 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 70/151 (46.36%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 28  MKNIEGMPGTRGGLALRCFQLGFASAAFGIMAASSDFASVSAFSYLVAAAGLQGLWSFFL 87
           M +I G PGT  GL LR  Q  FA+ +   M  S  F S +AF YL+AA GLQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 88  AVIDIYALLVKRNLHNRPIVTFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-K 147
           A++D +AL+ K+ L +  +V+ F VGD +T+TL+ A A + AGITVL   DL  CS   +
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 148 CVQLQSATAMAFLCWLTTLPSFFFNFWSLAS 178
           C + Q + A+AFLCW+T   S     W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmaCh20G004870 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-26
Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 28  MKNIEGMPGTRGGLALRCFQLGFASAAFGIMAASSDFASVSAFSYLVAAAGLQGLWSFFL 87
           MK + G PGT  GL LR  Q   A+A+ G+M ++ +F+  +AF YL+A+ GLQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 88  AVIDIYALLVKRNLHNRPIVTFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNK- 147
           A +D+YAL  K++L N  +V+ F VGD +T  L+ AAAC+ AG+ VL + D+  C+    
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 148 --CVQLQSATAMAFLCWLTTLPSFFFNFWSLAS 178
             C++ + A A++F+ W+    S    FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of CmaCh20G004870 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 5.7e-23
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 28  MKNIEGMPGTRGGLALRCFQLGFASAAFGIMAASSDFASVSAFSYLVAAAGLQGLWSFFL 87
           MK + G PGT  GL LR  Q   A+A+ G+M +S DF++ +AF +LVA+ GLQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 88  AVIDIYALLVKRNLHNRPIVTFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-- 147
           A +D+YA+  K +L +  +++ F VGD +T  L  AAAC+ AG+TVL   D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 148 -KCVQLQSATAMAFLCWLTTLPSFFFNFWSL 176
             C + Q +  ++F  W     S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of CmaCh20G004870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	4.7e-54	62.78	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
Q10Q78	7.0e-50	60.45	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	3.9e-48	57.87	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
P0DI70	1.4e-45	60.67	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
P0DI27	4.4e-44	55.62	CASP-like protein 5A1 OS=Pteridium aquilinum subsp. aquilinum OX=104588 GN=PtaqC...	[more]

BLAST of CmaCh20G004870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JE54	2.5e-90	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483628 PE=3 SV=1	[more]
A0A6J1FWR8	1.6e-89	97.75	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1	[more]
A0A1S3CKE0	7.0e-77	84.83	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1	[more]
A0A5D3CR88	7.0e-77	84.83	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001...	[more]
A0A0A0KAS5	1.0e-75	83.71	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1	[more]

BLAST of CmaCh20G004870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985617.1	5.1e-90	100.00	CASP-like protein 5A2 [Cucurbita maxima] >XP_022985618.1 CASP-like protein 5A2 [...	[more]
XP_023512454.1	1.9e-89	98.31	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like prote...	[more]
XP_022943338.1	3.3e-89	97.75	CASP-like protein 5A2 [Cucurbita moschata]	[more]
XP_038900719.1	1.7e-77	87.64	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_008463948.1	1.4e-76	84.83	PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-...	[more]

BLAST of CmaCh20G004870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	3.3e-55	62.78	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	1.0e-40	53.07	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	1.9e-26	46.36	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	4.3e-26	42.48	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	5.7e-23	40.40	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 35..162 e-value: 4.5E-23 score: 81.7
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 16..178
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 16..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G004870.1	CmaCh20G004870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane