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CmaCh20G004800 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCAATTCACAAGCATGCCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGGTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCTTCGCTATTGCTAGTTCATTTTGTAGATGAATATGAATTGTTGTCTTATTGTGGCGCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTTCATAACTTGGTTTATTCCTCTTTCCTCTACATATTGCATCTATAATTGCACAAAATCGAACATAGGAATAGCCTAAAAGTTGAAGCATCTTGCATTCAATCGTGATTAAGCCGACATCTAATCTTTATTTCCCGATGCTATTACCCCGCTAAAGCTGTTTTCGCAGATTAGTTATATCAGACATCTCAAATTGATGGTCTCATTATCATCTAGCTTAGAATTAGAATTAGAATTAGAATCGAGTGTATTTATGTTGTAGTTTTGTATATTTCCAGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGTGGATTTCCTTCCTCTTTTCCTCACCATCTCAACATCAATAAAATGCTTGAAATGCGTTCTAAACTTGGTATGGATACATGTATTTTCAGGGCAGAAAACTGGTGGACAGGAACTTGTTGGAGGGCTGGATTGTACAGTCCACAGAAACTTCTTTGGCAGTCAGGTAACTCTTGTTGCTTTCTCTTATTCGGTTCTGATTATCTAGATGCACGAGAGATAACTAGAGAACAGAAGGAACTAGGAAATTGGCATGGAATGTGTTCAGGAATCAAATTTGCATGAAGCTATCTCTGCCTGTGTGGCACTGTGGCCGACATGAATTTTTCCCTTCAAGTCATCCTACTAGTTGAATCAGCTTCTGATGTTTTTTTAAATCATAGCATGTTGGAAAAATACAGCCATAAATAATCTGAGTTAAAAGACACTGGTTAATCATCAAATCACATACCTCTACCATAGTATGGTATTGTTCACTTTGATATTGTCCACTTTGATGATAAGCTCTCATGGCTTTGCTTTTAGTTTTTCCAACAATGGAGATGTATTCCTTACTTATAAACTCATGATCAACTCCTTAATTAGTCAAAGTGATCCCTCTTAACAATCCTCACTAAGTTATTTTAAAATCTACCAGTTTACTGGCTCAGATAACGACTTTCCCCAATATAAATGTTCAAACTGTTGTGCGTTGAAAGCGGAACAAATGTACTCACAACACCAATGAACGAAACTACACAAAAAAGACACCAAGATATTTACGTGGTTCGGAGAGAAGAAGTTCCCCTACATCCACGGGTAGCAACCAATCACTAATAAACAAAGTGTTACAAGTGAACCTCACTATCACACTACAAAGACTTTCACCAATGTGTCACTCAACAAATACAATGTATCACTCAACAAATACATGTGACACCCAAAACTCTCCCAAATCCTGATATCCCTAGTTAGGAATGGAGGGAGAAATCTCTCCTTCATTAGCTATTAGCTATTATATAGTATTACAGAATCAAATCTCCGATATACTAAATCTGATTAAATCTAATTCAAATAACCAAATCAAATCTAATCCAAATAACCAATCAAATCTAATCTAAATAATCAAATCTAATCAAAACTTATGAAAATTTACCAGACATACAAATCCTCCATCTCACACAAAATATGAGATCTTCATTGAAGCATGGAGTTCAGAATCCAGAATCCTTGATGGTTTTGTTTGTACACAAGCTGATCCAAACACATTTATTGAAAGAAGTTCTTTGATGTTGATTCCAAATGTTCTGTTTTTTTCCCGGATACATGTTATCAGCTTATTGTTGAAGTTCGCTTAATATTCACTGTCCATTTCTTGAGTTCAGATTTTCCTAATTTAAGAAGAGATCATTATTATGTAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGACCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGGATTCAGATTCCTCTGGTGAAGGCAAAGAGGTTTGTTGTATCATCTCTACACTGCCAGTGCCTCTAATTTGAACACCTAAATGATTGTAATCTGTATATATGAGTCACAAGTTTCAGACGGTACATATGACGGTTTTGAGTCATAGTTCAGTAGAATTATAATTTCACTGTCACACGGAGTGTGCTCGTCGTGTTCCAAATGGATCAGAAGAAGAATTAGGCAAAAAATTAGGACGCATTCTAAGAAAAAAATAAAGCTTCCATTGAAGAGAAGCAAATGAAAGTCTTTGATAAAAATTCTTGTAGAATCGAGAATGAAATTTTCATTCTGTATATACTAGATCATGAATTAATAACGTTCATCCAATCTCCAAAAGAAAAAAAAATTCCAATTGTTTCAAACTTTCTCACCCCTTCACATTATGGTTTAATGAATATCGCAGGAAAAAAGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGTATAGTGTAGTTCTAACTTGAAATACCACACAGCATATTATGATGATCATCTCAAGTGAGTTACGACAATGGACTATGCAGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAGCTAGTACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAGAAATCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAATCCCTCCTTCCTCCTCAACCCACACTTACATTTTCAAGTTTCATTCTAGGTTTAAGTTATCTATTTTACAATTTGGACCATGTTTTATGTTCCTTACGTTATGTTACAGGATTCTTCTGTTGTATTAATTTGTTTATGACACGTTTGATGTTCCTTATGTCATGTTACATGGAGTTTTGTGTTTTAGTACTTCAAAATTCCTTCTCTCATAACTAAACGAGC ATGCTCCAATTCACAAGCATGCCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTTCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGGCAGAAAACTGGTGGACAGGAACTTGTTGGAGGGCTGGATTGTACAGTCCACAGAAACTTCTTTGGCAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGACCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGGATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAAAAAGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAGCTAGTACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAGAAATCAAAGATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAATCCCTCCTTCCTCCTCAACCCACACTTACATTTTCAAGTTTCATTCTAGGTTTAAGTTATCTATTTTACAATTTGGACCATGTTTTATGTTCCTTACGTTATGTTACAGGATTCTTCTGTTGTATTAATTTGTTTATGACACGTTTGATGTTCCTTATGTCATGTTACATGGAGTTTTGTGTTTTAGTACTTCAAAATTCCTTCTCTCATAACTAAACGAGC ATGCTCCAATTCACAAGCATGCCTATCGTCGGCGTTCTAGCTTTGCAGGGATCTTTTAACGAGCACATCGCAGCTTTGAGAAGGCTCGGAGTGAAGGGCGTAGAGATAAGGAAGCCTGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGAGAAAGCACCACCATGGCCAAACTTGCGGATCTTCATAACTTGTTTCCTGCTTTGCGTGAGTTCGTTAGAATGGGGAAGCCCGTGTGGGGCACCTGTGCAGGGCTCATCTTTTTGGCAAACAAGGCTACTGGGCAGAAAACTGGTGGACAGGAACTTGTTGGAGGGCTGGATTGTACAGTCCACAGAAACTTCTTTGGCAGTCAGCTTCAAAGCTTTGAGGCAGAGCTGTCGATACCAGAGCTAGTGTCTACTGAAGGTGGTCCGGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGAAGTGGGACCAGACGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTTCCTTGGATTCAGATTCCTCTGGTGAAGGCAAAGAGGAAAAAAGTTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTACTCGCAACAGCCTTCCATCCTGAATTAACATCAGATAACAGATGGCACAGTTACTTCCTGAAGATGGCTGGCGATGTTGAAGAATCCTCAGCTAGTACAGCAGCAGACATAGTAGATAACGATTCGAGATTCGAGAAATCAAAGATCGACCTTCCGATTTTTCTTTAG MLQFTSMPIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLADLHNLFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILEVGPDVQVLAHCPVSSNSSLDSDSSGEGKEEKSSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSASTAADIVDNDSRFEKSKIDLPIFL Homology
BLAST of CmaCh20G004800 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.5e-98 Identity = 182/252 (72.22%), Postives = 214/252 (84.92%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.9e-44 Identity = 103/218 (47.25%), Postives = 133/218 (61.01%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy Swiss-Prot
Match: Q2RMI9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=pdxT PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 8.3e-44 Identity = 105/217 (48.39%), Postives = 124/217 (57.14%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy Swiss-Prot
Match: A0LUK9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) OX=351607 GN=pdxT PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.1e-43 Identity = 102/220 (46.36%), Postives = 131/220 (59.55%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy Swiss-Prot
Match: Q6AFB8 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=pdxT PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 7.0e-43 Identity = 102/215 (47.44%), Postives = 121/215 (56.28%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy TrEMBL
Match: A0A6J1JFE0 (Glutaminase OS=Cucurbita maxima OX=3661 GN=LOC111483918 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.4e-140 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy TrEMBL
Match: A0A6J1FUQ8 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111448973 PE=3 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 9.9e-133 Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.3e-121 Identity = 226/251 (90.04%), Postives = 240/251 (95.62%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy TrEMBL
Match: A0A0A0KAR5 (Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121 Identity = 227/251 (90.44%), Postives = 239/251 (95.22%), Query Frame = 0
BLAST of CmaCh20G004800 vs. ExPASy TrEMBL
Match: A0A6J1CIP7 (Glutaminase OS=Momordica charantia OX=3673 GN=LOC111011333 PE=3 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120 Identity = 223/251 (88.84%), Postives = 241/251 (96.02%), Query Frame = 0
BLAST of CmaCh20G004800 vs. NCBI nr
Match: XP_022986058.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita maxima]) HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
BLAST of CmaCh20G004800 vs. NCBI nr
Match: XP_022944556.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita moschata] >KAG7010623.1 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132 Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CmaCh20G004800 vs. NCBI nr
Match: KAG6570776.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131 Identity = 242/251 (96.41%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of CmaCh20G004800 vs. NCBI nr
Match: XP_023511885.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 478.8 bits (1231), Expect = 3.0e-131 Identity = 243/251 (96.81%), Postives = 245/251 (97.61%), Query Frame = 0
BLAST of CmaCh20G004800 vs. NCBI nr
Match: XP_038900301.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Benincasa hispida]) HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121 Identity = 227/251 (90.44%), Postives = 238/251 (94.82%), Query Frame = 0
BLAST of CmaCh20G004800 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 ) HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99 Identity = 182/252 (72.22%), Postives = 214/252 (84.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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