CmaCh20G004500 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G004500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	glutamic acid-rich protein-like
Location	Cma_Chr20: 2133517 .. 2134572 (-)
RNA-Seq Expression	CmaCh20G004500
Synteny	CmaCh20G004500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAATCTTCGCGGTCCGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTGCCAGAGATAATCCACAATGGATCGAAGACGGCGAGAAGAAAAATCCCCTGTATCTAAGAGCAAAAGATGGAAAAAGTGGTAAGACGAGTCTCAATGTCCAATCTGAGGATGGGAAGGCGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGAAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTAGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACCAGAAAAAGAGCGAGGATAGATATGCTAAGATTGAAGATGATGAACATAAGGCTGGAGCCAGGCGAAGTTCTAGTAAATCGCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGCGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGTGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCACAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAATAAGGATAATGATGATGGAACAGAGTCGAGCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGATGATTTTCAGAATAACAGTGGAGGAGCTCTGGTGAAAGAGGAAATTCCAGTTTTGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGACTTGGAAGAAGGGGGTGATGATGGGTCTGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

mRNA sequence

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAATCTTCGCGGTCCGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTGCCAGAGATAATCCACAATGGATCGAAGACGGCGAGAAGAAAAATCCCCTGTATCTAAGAGCAAAAGATGGAAAAAGTGGTAAGACGAGTCTCAATGTCCAATCTGAGGATGGGAAGGCGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGAAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTAGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACCAGAAAAAGAGCGAGGATAGATATGCTAAGATTGAAGATGATGAACATAAGGCTGGAGCCAGGCGAAGTTCTAGTAAATCGCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGCGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGTGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCACAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAATAAGGATAATGATGATGGAACAGAGTCGAGCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGATGATTTTCAGAATAACAGTGGAGGAGCTCTGGTGAAAGAGGAAATTCCAGTTTTGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGACTTGGAAGAAGGGGGTGATGATGGGTCTGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

Coding sequence (CDS)

ATGAAGACCGTCACCGGAAGTATCGTTTCTTCGAAGCCAATCTCTATCTCAAAAGCGGCGTCCACTCTCTCCTCCTTTCTCTCCGTCGACAATGGCGCTTCGAAAGCAATCTGCGCCTATCTGAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAATCTTCGCGGTCCGATCGGAAGCACCGGCATCACGGATCCGAGGCTTCAAACGATCCAGAGGCTGCCAGAGATAATCCACAATGGATCGAAGACGGCGAGAAGAAAAATCCCCTGTATCTAAGAGCAAAAGATGGAAAAAGTGGTAAGACGAGTCTCAATGTCCAATCTGAGGATGGGAAGGCGGAAAAGGAAAGCGGTGGGAATGGTGATTTTGAGGATGCATCGGGTGAATATCGAAAGAGAAAGGTCGAGGACTTGAAGACTGAAATTGAAGATAAACCTAACCGAAAAGTAGAGATGGATGTAGAATCAAGTGATAAAGATAAGAGCGTTGTAGCAGTTGAGAAAAAAGGAAAAAAGCACCAGAAAAAGAGCGAGGATAGATATGCTAAGATTGAAGATGATGAACATAAGGCTGGAGCCAGGCGAAGTTCTAGTAAATCGCGAAATAGTGATAACAATGGCGAAATTGAAGCTTCTGCGAAGTTCGTCGAGAACAATATCGCAAGCGGAAAAGATAGAAAGAAGCACGTGGACAAGAAGAGTTTGGGTGACGATAAGGATCAAGTAAAGAGTGAAGGTCACAGAAGAAGAGACGCCGAGGAGGAAAAGAGCACAAATAAGGATAATGATGATGGAACAGAGTCGAGCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAACAGGGAAGAAGAAGATGATGATTTTCAGAATAACAGTGGAGGAGCTCTGGTGAAAGAGGAAATTCCAGTTTTGGATGACAAAGAGTTGAAAAGGAAAGAGAAGAAAAAAAGGAAGAATCGAGACTTGGAAGAAGGGGGTGATGATGGGTCTGAGGAACAACAGCGTACGAAGAGAAGAAAAGGAAATTTATGA

Protein sequence

MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKSSRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL

Homology

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BLAST of CmaCh20G004500 vs. ExPASy TrEMBL
Match: A0A6J1JCJ7 (cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 7.1e-174
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120
           SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120

Query: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180
           EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH
Sbjct: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180

Query: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240
           QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK
Sbjct: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240

Query: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300
           SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS
Sbjct: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300

Query: 301 GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 351

[Close]

BLAST of CmaCh20G004500 vs. ExPASy TrEMBL
Match: A0A6J1FSX8 (glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.0e-156
Identity = 327/354 (92.37%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120
           SRSDRKHRHHGSEASNDPEA+R NP WIED EKKNPLYLRAKDG+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSRNSDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRTKRRKGNL 353

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BLAST of CmaCh20G004500 vs. ExPASy TrEMBL
Match: A0A0A0KCS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.6e-96
Identity = 240/359 (66.85%), Postives = 273/359 (76.04%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTV GS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELKQLHKELKS
Sbjct: 1   MKTVNGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLR------AKDGKSGKTSLNVQ 120
           S S RKH HHGSE SN+ EAA  +   +EDG+K N            KD  + KTSL VQ
Sbjct: 61  SCSVRKHLHHGSEVSNEFEAAIHDQYRVEDGDKNNSSVSEKKKRPDRKDRTTDKTSLRVQ 120

Query: 121 S---EDGKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S   + GK   E+GGNG+ ED +G   K+K  +LK EIEDKP+ KVEMDVESSD+DKSVV
Sbjct: 121 SYNEQIGKTPMENGGNGNLEDVTG---KKKGSELKIEIEDKPSGKVEMDVESSDRDKSVV 180

Query: 181 AVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGK 240
           AVEKK K+H+KKSEDR+  IEDDE ++GAR    KS+N+DNN + EAS +FVENN+A+GK
Sbjct: 181 AVEKKRKRHKKKSEDRHDDIEDDERESGARLKHGKSQNTDNNCDAEASGEFVENNVANGK 240

Query: 241 DRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREE 300
            RKK  DKK L D KDQVKSE  RR D +E KSTN DND+GT+      KKKKK+  R E
Sbjct: 241 SRKKLEDKKRLDDVKDQVKSEDQRRGDVKEGKSTNNDNDNGTDHVDLSPKKKKKR--RRE 300

Query: 301 EDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDL-EEGGDDGSEEQQRTKRRKG 350
           EDDDFQ NSG A+VKEE+PVLD KELKRKEKKK KNR+L EEG DDGSEEQ  TKRRKG
Sbjct: 301 EDDDFQKNSGEAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGRDDGSEEQHSTKRRKG 354

[Close]

BLAST of CmaCh20G004500 vs. ExPASy TrEMBL
Match: A0A5A7SW64 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00720 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 3.9e-95
Identity = 244/360 (67.78%), Postives = 273/360 (75.83%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAK---DGK---SGKTSLNVQ 120
           S S RKH HHGS+ SN+ EAA DN   +EDG+KKN      K   D K   + KTSL VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SED---GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S+D   GK   E+GGNG+ ED SG   KRK   LK EIEDKP+ KVEMDVESSD    VV
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDVESSD----VV 180

Query: 181 AVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNN-GEIEASAKFVENNIASG 240
           AVEKK KKH+KKSEDR+  IEDDE ++GAR    KS+N+DNN    EAS +FVENN+A G
Sbjct: 181 AVEKKRKKHKKKSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 240

Query: 241 KDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNRE 300
           K RKK  DK+SLGD KDQVKSE  RR D +EE+ST+ DN +GT+      KKKKK+K R 
Sbjct: 241 KSRKKLEDKRSLGDVKDQVKSEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQR- 300

Query: 301 EEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDL-EEGGDDGSEEQQRTKRRKG 350
           EEDDDFQ NSGGA+VKEE+PVLD KELKRKEKKK KNR+L EEG DDGSEEQ   KRRKG
Sbjct: 301 EEDDDFQKNSGGAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRKG 352

[Close]

BLAST of CmaCh20G004500 vs. ExPASy TrEMBL
Match: A0A5D3CVE3 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00960 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 3.3e-94
Identity = 243/360 (67.50%), Postives = 272/360 (75.56%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGS+VSSKPISISKAASTLSSFLS DNGASKA+CAYLRRAS SFNELK LHKELKS
Sbjct: 1   MKTVTGSVVSSKPISISKAASTLSSFLSADNGASKALCAYLRRASDSFNELKHLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAK---DGK---SGKTSLNVQ 120
           S S RKH HHGS+ SN+ EAA DN   +EDG+KKN      K   D K   + KTSL VQ
Sbjct: 61  SPSVRKHLHHGSKVSNEFEAAMDNEYRVEDGDKKNSSVSEKKKRPDSKYRTTDKTSLRVQ 120

Query: 121 SED---GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVV 180
           S+D   GK   E+GGNG+ ED SG   KRK   LK EIEDKP+ KVEMDVESSD    VV
Sbjct: 121 SDDEQSGKTAMENGGNGNLEDVSG---KRKGGGLKIEIEDKPSGKVEMDVESSD----VV 180

Query: 181 AVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNN-GEIEASAKFVENNIASG 240
           AVEKK KKH+KKSEDR+  IEDDE ++GAR    KS+N+DNN    EAS +FVENN+A G
Sbjct: 181 AVEKKRKKHKKKSEDRHGDIEDDERESGARLKHGKSQNTDNNCDNAEASGEFVENNVAKG 240

Query: 241 KDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNRE 300
           K RKK  DK+SLGD KDQVKSE  RR D +EE+ST+ DN +GT+      KKKKK+K R 
Sbjct: 241 KSRKKLEDKRSLGDVKDQVKSEDQRRGDIKEERSTDNDNGNGTDLVDLSTKKKKKRKQR- 300

Query: 301 EEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNRDL-EEGGDDGSEEQQRTKRRKG 350
           EEDDDFQ NSG A+VKEE+PVLD KELKRKEKKK KNR+L EEG DDGSEEQ   KRRKG
Sbjct: 301 EEDDDFQKNSGEAMVKEEVPVLDSKELKRKEKKKSKNRELGEEGHDDGSEEQHSRKRRKG 352

[Close]

BLAST of CmaCh20G004500 vs. NCBI nr
Match: XP_022986894.1 (cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxima] >XP_022986896.1 cylicin-1-like [Cucurbita maxima])

HSP 1 Score: 619.8 bits (1597), Expect = 1.5e-173
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120
           SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA
Sbjct: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSEDGKA 120

Query: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180
           EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH
Sbjct: 121 EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKGKKH 180

Query: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240
           QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK
Sbjct: 181 QKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHVDKK 240

Query: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300
           SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS
Sbjct: 241 SLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQNNS 300

Query: 301 GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 GGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 351

[Close]

BLAST of CmaCh20G004500 vs. NCBI nr
Match: XP_022943393.1 (glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943395.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943397.1 glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943398.1 glutamic acid-rich protein-like [Cucurbita moschata])

HSP 1 Score: 562.8 bits (1449), Expect = 2.1e-156
Identity = 327/354 (92.37%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120
           SRSDRKHRHHGSEASNDPEA+R NP WIED EKKNPLYLRAKDG+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRGNPHWIEDDEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGG+GDFEDASGEYRKRKV DLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTEKESGGSGDFEDASGEYRKRKVGDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSRNSDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHKKKSEDRHAKIEDDEREDGARRSYSKSRNSDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRTKRRKGNL 353

[Close]

BLAST of CmaCh20G004500 vs. NCBI nr
Match: XP_023511985.1 (DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511987.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511988.1 DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155
Identity = 326/354 (92.09%), Postives = 335/354 (94.63%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120
           SRSDRKHRHHGSEASNDPEA R NP WIEDGEKKN  YLR KDG+SGK SLNVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEAPRVNPHWIEDGEKKNLEYLREKDGRSGKPSLNVQSEDGQD 120

Query: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK E +SGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG
Sbjct: 121 GKTETKSGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180

Query: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240
           KKH+KKSEDR+AKIEDDEH+AGARRS SKSRNSDNNGEIEAS KFVEN+IASGKDRKKH 
Sbjct: 181 KKHKKKSEDRHAKIEDDEHEAGARRSYSKSRNSDNNGEIEASGKFVENSIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKK+KKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKRKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRTKRRKGNL 353

[Close]

BLAST of CmaCh20G004500 vs. NCBI nr
Match: KAG7010591.1 (hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 325/354 (91.81%), Postives = 332/354 (93.79%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120
           SRSDRKHRHHGSEASNDPEA+RDNP WIEDGEKKNPLYLRAK G+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKVGRSGKPSFNVQSEDGKD 120

Query: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVE K 
Sbjct: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVETKR 180

Query: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSR SDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHKKKSEDRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300
           DKKSL DDKDQVKSEG RRRDAEEEKSTNKDNDDG ES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLVDDKDQVKSEGQRRRDAEEEKSTNKDNDDGAEST-KKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDGSEEQQRTKRRKGNL 352
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDGSEEQQRTKRRKGNL
Sbjct: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDGSEEQQRTKRRKGNL 353

[Close]

BLAST of CmaCh20G004500 vs. NCBI nr
Match: KAG6570745.1 (hypothetical protein SDJN03_29660, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 538.5 bits (1386), Expect = 4.3e-149
Identity = 313/340 (92.06%), Postives = 321/340 (94.41%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS
Sbjct: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60

Query: 61  SRSDRKHRHHGSEASNDPEAARDNPQWIEDGEKKNPLYLRAKDGKSGKTSLNVQSE---D 120
           SRSDRKHRHHGSEASNDPEA+RDNP WIEDGEKKNPLYLRAKDG+SGK S NVQSE   D
Sbjct: 61  SRSDRKHRHHGSEASNDPEASRDNPHWIEDGEKKNPLYLRAKDGRSGKPSFNVQSEDGKD 120

Query: 121 GKAEKESGGNGDFEDASGEYRKRKVEDLKTEIEDKPNRKVEMDVESSDKDKSVVAVEKKG 180
           GK EKESGGNGDFEDASGEYRKRKVEDLKTEIE+KPNRKVEMDVESSDKDKSVVAVE K 
Sbjct: 121 GKTEKESGGNGDFEDASGEYRKRKVEDLKTEIENKPNRKVEMDVESSDKDKSVVAVETKR 180

Query: 181 KKHQKKSEDRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEASAKFVENNIASGKDRKKHV 240
           KKH+KKSEDR+AKIEDDE + GARRS SKSR SDNNGEIEAS KFVENNIASGKDRKKH 
Sbjct: 181 KKHKKKSEDRHAKIEDDERENGARRSYSKSRISDNNGEIEASGKFVENNIASGKDRKKHE 240

Query: 241 DKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKKKKKKKKKKNREEEDDDFQ 300
           DKKSLGDDKDQVKSEG RRRDAEEEKSTNKDNDDGTES+ KKKKKKKKKKNREEEDDDFQ
Sbjct: 241 DKKSLGDDKDQVKSEGQRRRDAEEEKSTNKDNDDGTEST-KKKKKKKKKKNREEEDDDFQ 300

Query: 301 NNSGGALVKEEIPVLDDKELKRKEKKKRKNRDLEEGGDDG 338
           NNSGGA+VKEEIPV DDKELKRKEKKKRKNR LEEGGDDG
Sbjct: 301 NNSGGAMVKEEIPVSDDKELKRKEKKKRKNRGLEEGGDDG 339

[Close]

BLAST of CmaCh20G004500 vs. TAIR 10
Match: AT5G60030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-15
Identity = 108/307 (35.18%), Postives = 161/307 (52.44%), Query Frame = 0


Query: 1   MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
           MKTVTG +VS++PIS+SKAA  LS F S DNGAS+ + AYLRRASA+F ELK  H+E+KS
Sbjct: 1   MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60

Query: 61  SR----SDRKHRHHGSEASNDPEAARDNPQWIEDGEK----------KNPLYLRAKDGKS 120
                 SDR+ +   ++ S+D ++ R+      DG K             +Y R +D K 
Sbjct: 61  KETKPSSDRETKSTETKQSSDAKSERNVIDEF-DGRKIRYRNSEAVSVESVYGRERDEKK 120

Query: 121 GKTSLNVQSEDGKAEKESGGNGDFEDASGEYRKRKVEDLK---TEIEDKPNRKVEMDVES 180
            K S +    D K  ++     + E  S E R+RK E  K    + ED  + KV+  +E 
Sbjct: 121 MKKSKDADVVDEKVNEKL----EAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLE- 180

Query: 181 SDKDKSVVAVEKKGKKHQKKSE----DRYAKIEDDEHKAGARRSSSKSRNSDNNGEIEAS 240
            D+ KS    E+K KK +K ++    D   K+ED++  A  +    K +N D +   E  
Sbjct: 181 -DEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIK---EKKKNKDEDVVDEKE 240

Query: 241 AKFVENNIASGKDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKDNDDGTESSKKK 287
            + +E+   SG +RKK   KK   D  +++ SE     + + +K    D + G+E  K K
Sbjct: 241 KEKLEDEQRSG-ERKKEKKKKRKSD--EEIVSE-----ERKSKKKRKSDEEMGSEERKSK 289

[Close]

BLAST of CmaCh20G004500 vs. TAIR 10
Match: AT1G75335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-12
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 1  MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELK- 60
          MKTVTG + S+KPIS+SKAA+ LS F+S +NGAS+ + AYLRRAS +F ELK +H+E+K 
Sbjct: 1  MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60

Query: 61 -----SSRSDRK-HRHHGSEASNDPEAARDNPQ 87
               SS+  RK HR  GSE     +  R + +
Sbjct: 61 KETKLSSKKKRKSHREMGSEERKKSKKKRKSSE 93

The following BLAST results are available for this feature:

BLAST of CmaCh20G004500 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G004500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCJ7	7.1e-174	100.00	cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1	[more]
A0A6J1FSX8	1.0e-156	92.37	glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE...	[more]
A0A0A0KCS1	4.6e-96	66.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301030 PE=4 SV=1	[more]
A0A5A7SW64	3.9e-95	67.78	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3CVE3	3.3e-94	67.50	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of CmaCh20G004500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986894.1	1.5e-173	100.00	cylicin-1-like [Cucurbita maxima] >XP_022986895.1 cylicin-1-like [Cucurbita maxi...	[more]
XP_022943393.1	2.1e-156	92.37	glutamic acid-rich protein-like [Cucurbita moschata] >XP_022943394.1 glutamic ac...	[more]
XP_023511985.1	1.4e-155	92.09	DNA topoisomerase 1-like [Cucurbita pepo subsp. pepo] >XP_023511986.1 DNA topois...	[more]
KAG7010591.1	4.4e-154	91.81	hypothetical protein SDJN02_27385, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570745.1	4.3e-149	92.06	hypothetical protein SDJN03_29660, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh20G004500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60030.1	3.0e-15	35.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75335.1	2.4e-12	50.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..351
None	No IPR available	PANTHER	PTHR48227	DNA TOPOISOMERASE 1-LIKE	coord: 1..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G004500.1	CmaCh20G004500.1	mRNA