CmaCh20G004240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G004240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ras-related protein Rab-8A
Location	Cma_Chr20: 2009615 .. 2015041 (+)
RNA-Seq Expression	CmaCh20G004240
Synteny	CmaCh20G004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCATCCAAAGGAGTCACTGTCTTTCTCCCGTTCTTGGTTCATATCACGAATCAATCTTCATAGTGAATTGTATGCTGTATGCTTTATACACCTAACGAAAAAACATCTTTCCATTTTTTCCCATTTTTCATTTAAATGGAAATTTTCCACCTACTCCGAAAAAAACATTATGGATAAAACATGTCTTTAGGCAATCATTTACATGTTTTTTTTATTTTTTTTTTATTTTTATAAATATATTGTCAAAAAAAAAAGTTTCATAAATTCTATAATAATAATGACAATAATAAAACATATTTAACAAATGGATTGCAAAACCAAACGTGTTTTTGTTTGTTGTTTATTGTTTATTTTTCACATTATTTGTCTTAAAATCCTTACTTAATCAAATACTAAATAAGCCATTAATTTCACTTTAATTGTCGCAATTTTGCATTTCAAAACCCTAATTATTTGCTTATTATTGTTAAATAAGATAAATAGTAAAATGGACTTAATCTAATTTACCCAAATAAATAGAAATTAATTAAAAAGACGCAAATTTCTTAATAGGGAAAACCTAGCGGGAAATTTGAAAATTTTCGATGAAAAACACAAAAGAATTAAAATCTCTATACTCGCTTTTCATTGGTCCATTCAAAAGCGCCACGGATCGGTAACATAATTCATTCACAACCGTCGACCAAATATCAATCCAACAGATCACGTTCTTCCAACACATTCGCCGGTTCCCGCTGCGTTATAAAATCAGCGGCAACTCGCAAACCTGATCCGAACCAAACCCGCCAATTTGCTTAACCATCGACTATAACTCTCCGGCGAGCAGCGGCTTCGTTCTTTTCATAGTAGGACCTTCAGGCAACATTCAATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAATCGGTTTCCCGTTCCGTTAAGGCCGGCTTGCAGTTCCCCGTCGGTCGTATCGCTCGTTATCTGAAGAAAGGAAGATACTCTCAGCGTGTCGGCACCGGCGCTCCGGTCTATTTAGCAGCAGTCATGGAGTATCTAGCCGCTGAGGTAATCAATTGGATCGCGATTTTCCTCTCCTTTTTTTTGTTAGATGAACAGACTCTCCACACTCAACAACCATATGATATTGTTCATTTTTTCTTTTTTGTGCTTTAACAAAATGCTTAGTACTAATAAAATTATTTTTAGATTATAAACTCATGATTAACACTTCTTTCGATTATAAATTCATGATCAACACTTTCCTTCCCCTTGAACAAAGTATGTTTTTCTTTTTTCGAGGCTGACTCCTTTGGAATCTTAATCATTTTTTATTGTCTTAGGCTTGATTTCTCTTTTTTTTTTTTTTTAGAGTTGTTTGTTTGACATTCCGGATTAAATTGGCATGAATAGCATCCCACACTTTTCATTTCTCTCATTAGAATTGCCATTTTCGCTTATCTAACTACGCGATTTACAGGTTCTTGAGTTAGCTGGAAATGCCGCTAGAGACAACAAGAAGAACAGAATCATTCCAAGGCACGTTCTATTAGCGATTAGGAACGACGAAGAACTCGGAAAATTGCTCGCCGGCGTAACCATTGCCAGTGGTGGTGTTCTTCCAAACATCAACCCGGTGCTGTTGCCGAAGAAGACGGACAAGGCTTTGAAAGAGCCGAAATCTCCATCGAAGGCCGGTAAGTCGCCGAGCAAGGTGGCTTGATCGTAGAATTACAGAGTTTGAGTTGGATGATTCTGTAATTTATGACGGTGTTTTGGATTTTGTTTGTAATGGTAGACGAAGATTAGGGATTAGGGCCTTGGAATGCAATACTGTAATCGATAATGGCTATTTAGGGATTTTCCGGCGAGGAATCAAACCAGAAGCTCTACTCGTAGTTAATCGTTAATCACAAACTTATTAATGATTGATAGTAATGAAATGGAATTAATTAAGTCAAAAAAAATGTTTTAAATGATTTATTAATTATTATTTATATAAATAACGTTTTATTCTGTTGTTATTTATAGGAAAATATATGTTCGTAGTTTTTTTAGGCGAGAAAAATATTATTGGTTTAAATATTAATGGGATATTATTAAAAGAATATTCAAATTAGAGTGGGACCCACCGTTGGGCAATTTGCTGAGGTGGCCAACTAATTGACACCAAATTTCATTTCCGTTTCAATAATGCATTGGGGAATCTTAATTAAGAGTAATAATAAATTTGTAGTAATTTTAAATAATATATTAACTATTACACGTGGCATAAAAGAAAGTGAAAAATATGTTGACGACAGGTGTCAGCATATAATTGGTCAAACTATTTCATAGGGTTCACGGTCTGGTCCCGCTAAAGAAAGGGAATAAGGTCCGAGATAAAGGTCTCTTTATAGGCGATGAGCCTCTGAACGAATTTTTTTTTCCTGTTTCTCGCTAATATCGCCAAATTAACCAACGAATCACTGTCGATCTCTCTCTAAACTCGCACGCGCCACCTTACGCGCCTCGCCGGTGACTTGGTTGTTTCTGTCTTGGAATCGGTACATTTCTCTAGCATTTTGGAGTTTTATGCCTTTCTGTATTTTGTTCGTTTATGGAGTTGGTGTTTTTTTTTTTTTTTTTTTCATTTCGGGTTGTTTTGATGATGTTTTAGGTTATTTCCAAGGGAGGCTTGTCTTTTTCTTGATCGATTTGATTGGAATTGTAATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTGTAATTTTCTTTTCGGTTTCAAATAGAGCCTCATTTTCTAATATTTTCTTTGAGGTTGTCTCATTATGGTTTGTTGATTCGGAACGCGCGAAAATTTTCCTTTGGGAATGCTTGTTTTTCTTGGATCTGGGATCGCTCTCCCTGATCCCTCAGGTTTTTTTTGGATGATAATATCATTACTCATTGCGCTGAAATTGATTTGGTGATTGAGGAAGCTTGTTGCTGATTGGATATATTTTACACGATGTAAATTTGAACATCTTCATTTTATCGACGGCATTCTTTCTGTTGAATTGCTGATTCTGTTCGCATTGTAATGCCACCTAATGATGTTCTTTGTTTCTGTTCATTTGGTTGCTTATTCGTGCAGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTTTCAGATGGATCCTTCACCACTAGTTTTATCACTACCATTGGGTGTGTATGATCTTCAATTTTCTAGATGAATGCAAATGCCCATGTCTAGTGGGATTAAGGAAGTAAAAAGTTTACATCTGGACTAACTATGTCATTTTTTCCTCCTGCAGTATTGATTTCAAAATCAGAACCATTGAGCTTGATGGAAAGCGGATCAAGCTCCAAATTTGGGATACGGCTGGTCAAGAGCGCTTCCGTACAATCACCACAGGTATTCTTTTCCACCCTTCGTGATCATACACTTGTCTGTTGCTGGGAGGTGGAATCATGATAGATATATATAACATTGTGTTTGAATGAAATTGATTTGTGGCTCTTCTTTTCTACATCTCTGTCTAAATTGTAAATCTTTCATGGAATGGCTAATTGTTTTACCTTTAAGATTCGAGTTGAAATTGGAGTTGAGTGTCTTGGGATTGTTTGTTGAGTTGAACTTGGAGTTGAGTGTCTTGGGATTGTTTGTTGTTGCTGATCTCGTATTAGGCCTATGAATGATGATGTTTGACAGCATAGGTTGCAGTTTCTTCTTTGCTAATTGATTCTCTTTTCTTTGTTTGACAAGATGTTTGTGAGATCTCATGTCGGTTGGAGAGGGGAACGAAACATTTTTTATAAGGATGTAGAAACCTCTCCCTAACAGACGTGTTTTAAAATGTTTTTATCATGTGCTAGATTGTATCATTAGCATTAATCATCTTAACAAACATTCCAATTAGCAGAGTTTCTCAACTCTTCCGTTTGTTGTTTTCAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAGTAATCACCATGTTTACCATTTTTGCTTGCAGATTTTTCTTTTGGTGAATTACATTCAATCTTTGTACAAAATTTTATTGAATCCAATGTATCCTTCCATCATTTATTATGCTTTTTCCTATGTGGTGGATGGTCAAGGACGTTTGATAGACTTATGAGCTGATGTAGTACTCGCCCCTATCTCTAACAGGGCTTATGCATTCCACTCGCTATTGTATAAACGAGCGTTTTCTTCCATTTTTGTTATCATTTTGCCTACTCATTTCTTATTCTCTAACCATTTTCAGATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAACGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGTATGTCATATTCTGCTATAAAAGCTGAAAAGAAAGGCATAAACTGATTTTATCTCCTTGGATATTCAGTCTAGCCTAGTATCTGGAGCACAGAATATATGAAATAGATTCCAAACTATTATAAAAAATATTAGAACTATGATTCATACTTATCAGACCTCGTGGCCGGACTCCGAAAAAAGAGCTAAATGGTTATGCCACTCACCTCGTGCTTTTAATATCCTTCTCTGTCAGGCTGTGCCTAAATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTCGAAACTGTGAGTTGCTTGCTTGCTCTTCCTTTTGTCTAATTTTTCCACAAGAGTGTGTAAAGTTGGAGGCTGAAAGATATTTGCATTACAGAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAAACAGCGTCTCTCTGATACTGATTCAAAAGCCGAGGTATTCTATTGTTATGCTATTAGATCACCCAATAATTAAGAACAACATAAGCTCTATTACCTTTTATTTTTCTGAATTCACGAACTAAAAAGTCGGGCTTTTGTTACGTTTGCTCGCAGTCGTCGACGATCAAGATTAATCAACAAGACCAGGGAGACAATGCTGGTCAGGCTGCGCAAAAATCAAGCTGCTGTGGTTCTTAAGATGATCAATCCCTTTGAAGTAGTCATGATATTGAAGCCACACTTCATTGATGGTGGGGGCATCTTAGTTATTTCGTGATTCTTTTGAATTTCATTTAGTGTGTGTAATAGATACATAGGTAATTTCACGTTTTAGAATTTCATTTATGGTCATTGTCTATAATGATAAAGAGATTTATTTGGTCTGTTTACCTTTCCTTTTTGGCTTTTGAGGAACAATGTTATCCCCAATTATTTGTTTGCTATAAGAAGGTTTGTATATAAGCAACTATTTTTACTTCAAAATGACTAATTATTTCCGTC

mRNA sequence

ATGTTGCATCCAAAGGAGTCACTGTCTTTCTCCCGTTCTTGGTTCATATCACGAATCAATCTTCATAGTGAATTGTATGCTCGGCTTCGTTCTTTTCATAGTAGGACCTTCAGGCAACATTCAATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAATCGGTTTCCCGTTCCGTTAAGGCCGGCTTGCAGTTCCCCGTCGGTCGTATCGCTCGTTATCTGAAGAAAGGAAGATACTCTCAGCGTGTCGGCACCGGCGCTCCGGTCTATTTAGCAGCAGTCATGGAGTATCTAGCCGCTGAGGTTCTTGAGTTAGCTGGAAATGCCGCTAGAGACAACAAGAAGAACAGAATCATTCCAAGGCACGTTCTATTAGCGATTAGGAACGACGAAGAACTCGGAAAATTGCTCGCCGGCGTAACCATTGCCAGTGGTGGTGTTCTTCCAAACATCAACCCGGTGCTGCCGGTAAGTCGCCGAGCAAGGTGGCTTGATCGTAGAATTACAGAGTTTGAGTTGGATGATTCTGTAATTTATGACGGTGTTTTGGATTTTGTTTGTAATGGTAGACGAAGATTAGGGATTAGGGCCTTGGAATGCAATACTGTAATCGATAATGGCTATTTAGGGATTTTCCGGCGAGGAATCAAACCAGAAGCTCTACTCGTAGTTAATCGTTATTTCCAAGGGAGGCTTGTCTTTTTCTTGATCGATTTGATTGGAATTGTAATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTTTCAGATGGATCCTTCACCACTAGTTTTATCACTACCATTGGTATTGATTTCAAAATCAGAACCATTGAGCTTGATGGAAAGCGGATCAAGCTCCAAATTTGGGATACGGCTGGTCAAGAGCGCTTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAACGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTGCCTAAATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTCGAAACTAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAAACAGCGTCTCTCTGATACTGATTCAAAAGCCGAGTCGTCGACGATCAAGATTAATCAACAAGACCAGGGAGACAATGCTGGTCAGGCTGCGCAAAAATCAAGCTGCTGTGGTTCTTAAGATGATCAATCCCTTTGAAGTAGTCATGATATTGAAGCCACACTTCATTGATGGTGGGGGCATCTTAGTTATTTCGTGATTCTTTTGAATTTCATTTAGTGTGTGTAATAGATACATAGGTAATTTCACGTTTTAGAATTTCATTTATGGTCATTGTCTATAATGATAAAGAGATTTATTTGGTCTGTTTACCTTTCCTTTTTGGCTTTTGAGGAACAATGTTATCCCCAATTATTTGTTTGCTATAAGAAGGTTTGTATATAAGCAACTATTTTTACTTCAAAATGACTAATTATTTCCGTC

Coding sequence (CDS)

ATGTTGCATCCAAAGGAGTCACTGTCTTTCTCCCGTTCTTGGTTCATATCACGAATCAATCTTCATAGTGAATTGTATGCTCGGCTTCGTTCTTTTCATAGTAGGACCTTCAGGCAACATTCAATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAATCGGTTTCCCGTTCCGTTAAGGCCGGCTTGCAGTTCCCCGTCGGTCGTATCGCTCGTTATCTGAAGAAAGGAAGATACTCTCAGCGTGTCGGCACCGGCGCTCCGGTCTATTTAGCAGCAGTCATGGAGTATCTAGCCGCTGAGGTTCTTGAGTTAGCTGGAAATGCCGCTAGAGACAACAAGAAGAACAGAATCATTCCAAGGCACGTTCTATTAGCGATTAGGAACGACGAAGAACTCGGAAAATTGCTCGCCGGCGTAACCATTGCCAGTGGTGGTGTTCTTCCAAACATCAACCCGGTGCTGCCGGTAAGTCGCCGAGCAAGGTGGCTTGATCGTAGAATTACAGAGTTTGAGTTGGATGATTCTGTAATTTATGACGGTGTTTTGGATTTTGTTTGTAATGGTAGACGAAGATTAGGGATTAGGGCCTTGGAATGCAATACTGTAATCGATAATGGCTATTTAGGGATTTTCCGGCGAGGAATCAAACCAGAAGCTCTACTCGTAGTTAATCGTTATTTCCAAGGGAGGCTTGTCTTTTTCTTGATCGATTTGATTGGAATTGTAATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTTTCAGATGGATCCTTCACCACTAGTTTTATCACTACCATTGGTATTGATTTCAAAATCAGAACCATTGAGCTTGATGGAAAGCGGATCAAGCTCCAAATTTGGGATACGGCTGGTCAAGAGCGCTTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTAACAGATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAATATCGAACAACATGCTTCTGATAACGTCAACAAAATATTGGTTGGAAACAAGGCTGACATGGATGAAAGCAAAAGGGCTGTGCCTAAATCCAAAGGACAAGCGCTTGCTGATGAGTATGGGATCAAATTCTTCGAAACTAGTGCAAAGACAAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAAACAGCGTCTCTCTGATACTGATTCAAAAGCCGAGTCGTCGACGATCAAGATTAATCAACAAGACCAGGGAGACAATGCTGGTCAGGCTGCGCAAAAATCAAGCTGCTGTGGTTCTTAA

Protein sequence

MLHPKESLSFSRSWFISRINLHSELYARLRSFHSRTFRQHSMEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLAAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPVLPVSRRARWLDRRITEFELDDSVIYDGVLDFVCNGRRRLGIRALECNTVIDNGYLGIFRRGIKPEALLVVNRYFQGRLVFFLIDLIGIVMAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS

Homology

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BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.6e-109
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDS+AE +TIKI+Q DQ   AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

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BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.0e-108
Identity = 200/216 (92.59%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           L+DTD++AE  TIKINQ DQG    QA QKS+CCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 6.5e-103
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESS-TIKINQQDQGDNAGQAAQKSSCCGS 469
           L+D+D++ E+  +I I   DQ  N  QAA KS+CCGS
Sbjct: 181 LADSDTRQEAQPSITIKPADQSGN--QAAAKSACCGS 215

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BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 4.8e-98
Identity = 183/214 (85.51%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVE VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCC 467
           L++TD+KAE   IKI +QD   ++   A+KS+CC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASS-STAEKSACC 213

[Close]

BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 3.4e-96
Identity = 180/215 (83.72%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTN NVE+VF SIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGD-NAGQAAQKSSCC 467
           L+++D+KAE   IKI +QD    ++    +KS+CC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL
Match: A0A6J1JI01 (ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111484528 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 4.9e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 216

[Close]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL
Match: A0A6J1FYD5 (ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 4.2e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDSKAESSTIKINQQDQG NAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 216

[Close]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL
Match: A0A1S3BJJ0 (ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 211/216 (97.69%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           L+DTDSKAE STIKINQQDQG NAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL
Match: A0A0A0KHW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 209/216 (96.76%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNK+LVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           L+DTDSKAE STIKINQQDQG NAGQAAQKS+CCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL
Match: A0A6J1G6M1 (ras-related protein RABE1c OS=Cucurbita moschata OX=3662 GN=LOC111451346 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 4.8e-109
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDSK+E STIKIN QDQG NAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKSEPSTIKIN-QDQGANAGQAAQKSSCCGS 215

[Close]

BLAST of CmaCh20G004240 vs. NCBI nr
Match: KAG6570726.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010570.1 Ras-related protein RABE1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 648.3 bits (1671), Expect = 5.1e-182
Identity = 355/427 (83.14%), Postives = 359/427 (84.07%), Query Frame = 0


Query: 42  MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYLA 101
           MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLK GRYSQRVGTGAPVYLA
Sbjct: 1   MEASGKAKKGAGGRRGGEKKKSVSRSVKAGLQFPVGRIARYLKNGRYSQRVGTGAPVYLA 60

Query: 102 AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 161
           AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN
Sbjct: 61  AVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNIN 120

Query: 162 PVLPVSRRARWLDRRITEFELDDSVIYDGVLDFVCNGRRRLGIRALECNTVIDNGYLGIF 221
           PVL   +     D+ + E +                                        
Sbjct: 121 PVLLPKK----TDKALKEPKSPSKA----------------------------------- 180

Query: 222 RRGIKPEALLVVNRYFQGRLVFFLIDLIGIVMAAPPARARADYDYLIKLLLIGDSGVGKS 281
                         YFQGR VFFLIDLIGIVMAAPPARARADYDYLIKLLLIGDSGVGKS
Sbjct: 181 -------------GYFQGRFVFFLIDLIGIVMAAPPARARADYDYLIKLLLIGDSGVGKS 240

Query: 282 CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM 341
           CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM
Sbjct: 241 CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM 300

Query: 342 GILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALAD 401
           GILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALAD
Sbjct: 301 GILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALAD 360

Query: 402 EYGIKFFETSAKTNLNVEEVFFSIARDIKQRLSDTDSKAESSTIKINQQDQGDNAGQAAQ 461
           EYGIKFFETSAKTNLNVEEVFFSIARDIKQRLSDTDSKAESSTIKINQQDQG NAGQAAQ
Sbjct: 361 EYGIKFFETSAKTNLNVEEVFFSIARDIKQRLSDTDSKAESSTIKINQQDQGANAGQAAQ 375

Query: 462 KSSCCGS 469
           KSSCCGS
Sbjct: 421 KSSCCGS 375

[Close]

BLAST of CmaCh20G004240 vs. NCBI nr
Match: CAG7910545.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 511.5 bits (1316), Expect = 7.5e-141
Identity = 322/611 (52.70%), Postives = 370/611 (60.56%), Query Frame = 0


Query: 42  MEASGKAKKGAGGRR-GGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYL 101
           ME +GK KK  GGR+ GG K KSVS+S+KAGLQFPVGRI R+LKKGRY+QR+G GAPVY+
Sbjct: 1   METTGKVKKAFGGRKAGGPKTKSVSKSIKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYM 60

Query: 102 AAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPN- 161
           AAV+EYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIA GG++   
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGLIVRR 120

Query: 162 ---------------INPVLPVSRRARWLDRRI--------------TEFELDDSVI--- 221
                           +P+  ++ R     +                 EFE    VI   
Sbjct: 121 HHQMFLTKLSHRVYLSSPLRCIATRGSCSSKLFVGGLNYDTNEPVLKNEFEKYGQVINVR 180

Query: 222 -------------------------------------------------YDGVLD----- 281
                                                            Y  VL      
Sbjct: 181 VICDHMSGKSKGYGFVLFDSEDAAASALASMNNQVCYTQLSQTEILFSLYKFVLTCRCSA 240

Query: 282 ------FVCNGRRRLG----------IRALECNTVIDNGYLGIF---RRG-----IKPEA 341
                 FVC+ R   G          +R++   +V+++    +F   +RG     I+P +
Sbjct: 241 FFQLCFFVCSRRVLCGCHFDFKVRPILRSMVRISVLNDALKSMFNAEKRGKRQVMIRPSS 300

Query: 342 LLV------------------VNRYFQGRLVFFL---IDLIGIV---------------- 401
            ++                  V+ +  G++V  L   ++  G++                
Sbjct: 301 KVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTA 360

Query: 402 -----------------------------------MAAPPARARADYDYLIKLLLIGDSG 461
                                              MAAPPARARADYDYLIKLLLIGDSG
Sbjct: 361 RLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKISMAAPPARARADYDYLIKLLLIGDSG 420

Query: 462 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 469
           VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY
Sbjct: 421 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 480

[Close]

BLAST of CmaCh20G004240 vs. NCBI nr
Match: CAF2335311.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 506.5 bits (1303), Expect = 2.4e-139
Identity = 318/608 (52.30%), Postives = 371/608 (61.02%), Query Frame = 0


Query: 42  MEASGKAKKGAGGRR-GGEKKKSVSRSVKAGLQFPVGRIARYLKKGRYSQRVGTGAPVYL 101
           ME +GK KK  GGR+ GG K KSVS+S+KAGLQFPVGRI R+LKKGRY+QR+G GAPVY+
Sbjct: 1   METTGKVKKAFGGRKAGGPKTKSVSKSIKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYM 60

Query: 102 AAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASG------ 161
           AAV+EYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIA G      
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGANRYQM 120

Query: 162 --------------------------------------------------GVLPNINPVL 221
                                                             G + N+  + 
Sbjct: 121 FLTRLSHRVCYLASPLRCIASRGSCSSKLFVGGLNYDTNEPVLKNESEKYGQVINVRVIC 180

Query: 222 P-VSRRARW------------------LDRRITEFELDDSVIYDGVLDFV---------- 281
             VS +++                   ++ ++   +L  + I   +  FV          
Sbjct: 181 DHVSGKSKGYGFVLFDSEEAAASALASMNNQVCYTQLSQTEILFSLYKFVLTCRCSAFFQ 240

Query: 282 ----CNGRR-----------RLGIRALECNTVIDNGYLGIF---RRG-----IKPEALLV 341
                + RR           R  +R++   +V+++    +F   +RG     I+P + ++
Sbjct: 241 LCFFVSSRRVLCGCRFDFKVRPILRSMVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVI 300

Query: 342 ------------------VNRYFQGRLVFFL---IDLIGIV------------------- 401
                             V+ +  G++V  L   ++  G++                   
Sbjct: 301 IKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLL 360

Query: 402 --------------------------------MAAPPARARADYDYLIKLLLIGDSGVGK 461
                                           MAAPPARARADYDYLIKLLLIGDSGVGK
Sbjct: 361 PSRQFGYIVLTTSAGIMDHEEARRKNVGGKISMAAPPARARADYDYLIKLLLIGDSGVGK 420

Query: 462 SCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGA 469
           SCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGA
Sbjct: 421 SCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGA 480

[Close]

BLAST of CmaCh20G004240 vs. NCBI nr
Match: XP_022986938.1 (ras-related protein RABE1c-like [Cucurbita maxima])

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 216

[Close]

BLAST of CmaCh20G004240 vs. NCBI nr
Match: XP_022943935.1 (ras-related protein RABE1c-like [Cucurbita moschata] >XP_023512009.1 ras-related protein RABE1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 8.7e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDSKAESSTIKINQQDQG NAGQAAQKSSCCGS
Sbjct: 181 LSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 216

[Close]

BLAST of CmaCh20G004240 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 400.2 bits (1027), Expect = 2.3e-111
Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           L+DTDS+AE +TIKI+Q DQ   AGQA QKS+CCGS
Sbjct: 181 LADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of CmaCh20G004240 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-110
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDS+AE +TIKI+Q DQ   AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CmaCh20G004240 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-110
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDS+AE +TIKI+Q DQ   AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CmaCh20G004240 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-110
Identity = 202/216 (93.52%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVP +KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           LSDTDS+AE +TIKI+Q DQ   AGQA QKS+CCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of CmaCh20G004240 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 395.2 bits (1014), Expect = 7.3e-110
Identity = 200/216 (92.59%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 253 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 312
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 313 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 372
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 373 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 432
           VNKILVGNKADMDESKRAVPKSKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 433 LSDTDSKAESSTIKINQQDQGDNAGQAAQKSSCCGS 469
           L+DTD++AE  TIKINQ DQG    QA QKS+CCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of CmaCh20G004240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	4.6e-109	93.52	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	1.0e-108	92.59	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	6.5e-103	90.32	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	4.8e-98	85.51	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	3.4e-96	83.72	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of CmaCh20G004240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JI01	4.9e-114	100.00	ras-related protein RABE1c-like OS=Cucurbita maxima OX=3661 GN=LOC111484528 PE=4...	[more]
A0A6J1FYD5	4.2e-113	99.54	ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE...	[more]
A0A1S3BJJ0	3.9e-111	97.69	ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1	[more]
A0A0A0KHW0	1.5e-110	96.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1	[more]
A0A6J1G6M1	4.8e-109	97.22	ras-related protein RABE1c OS=Cucurbita moschata OX=3662 GN=LOC111451346 PE=4 SV...	[more]

BLAST of CmaCh20G004240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570726.1	5.1e-182	83.14	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
CAG7910545.1	7.5e-141	52.70	unnamed protein product [Brassica rapa]	[more]
CAF2335311.1	2.4e-139	52.30	unnamed protein product [Brassica napus]	[more]
XP_022986938.1	1.0e-113	100.00	ras-related protein RABE1c-like [Cucurbita maxima]	[more]
XP_022943935.1	8.7e-113	99.54	ras-related protein RABE1c-like [Cucurbita moschata] >XP_023512009.1 ras-related...	[more]

BLAST of CmaCh20G004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59840.1	2.3e-111	94.44	Ras-related small GTP-binding family protein	[more]
AT3G46060.1	3.3e-110	93.52	RAB GTPase homolog 8A	[more]
AT3G46060.2	3.3e-110	93.52	RAB GTPase homolog 8A	[more]
AT3G46060.3	3.3e-110	93.52	RAB GTPase homolog 8A	[more]
AT3G53610.1	7.3e-110	92.59	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 91..106 score: 81.37 coord: 62..84 score: 69.98 coord: 148..166 score: 67.47 coord: 120..134 score: 73.78 coord: 106..119 score: 89.46
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 51..171 e-value: 2.0E-73 score: 259.9
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 60..164 e-value: 6.21089E-69 score: 213.351
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 249..433 e-value: 0.0015 score: 5.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 273..467 e-value: 1.1E-9 score: 48.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 268..432 e-value: 8.6E-107 score: 370.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 269..432 e-value: 2.7E-35 score: 133.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..468
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 234..466
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 234..466
None	No IPR available	PROSITE	PS51420	RHO	coord: 261..430 score: 11.300058
None	No IPR available	PROSITE	PS51419	RAB	coord: 263..466 score: 38.372303
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 265..432 e-value: 1.75919E-121 score: 349.644
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 270..432 e-value: 3.4E-14 score: 61.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 269..430 e-value: 2.0E-65 score: 219.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 258..468 score: 21.113075
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 266..422 e-value: 1.5E-30 score: 104.1
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 54..137 e-value: 1.5E-13 score: 51.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 49..173 e-value: 4.0E-59 score: 200.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 48..146
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 140..164 e-value: 7.9E-13 score: 47.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 261..466 e-value: 4.6E-76 score: 256.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 263..451
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 70..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G004240.1	CmaCh20G004240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046982	protein heterodimerization activity