CmaCh20G004090 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh20G004090
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionS-acyltransferase
LocationCma_Chr20: 1960213 .. 1961947 (-)
RNA-Seq ExpressionCmaCh20G004090
SyntenyCmaCh20G004090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTTTTACACAATCGAGTGGCGGTGAATTTTTGGTTGGAAAGAAATGGTGCAATTACACGAGCGGAAGAATCCGGCGAGCTTGCCGGAGCTGATCGGCGGTTCCGTAGTCTCTCTAACACTTGGTTTGCTAACTCAATGTATCCAGTTTCTTGTTCCTCACTTCTTCTCCGATTTGTCCGCCTTCATTCAACTACCATTTTCAGGTCTCTCTCTCAATCTCTCTATATACTGTTCTTCTTTGGAGCTTGATTGATGGTTGCCATTAACTGTGAGGTTATTTTAGTTCATCTTCTTCAGATGCAATTTTCCGAAGTTTAGTTTTAGAAATCGAATTCCTCTATAAACAGAAAGCCTAAGCTGAATTTTCAGATTTGGCGAAGTATGAACTTCTTGGTGGGGATGGAACTAGATTAGAGGTTGTCTCTGCATTCTTTGCCTTGGTTGCTGACTGCTACTTGTATTATCATGCTTAGGATTGGTTAGAATCCGTTCCTCTGCATCTCCTTCAGATGCAATTTCCCAAAGCGTATTTCTGTCATTTGTAGTTCATGTGGAGGCAGTTACTTTTAGGTGACACAACTCATTAAGATACTGTTTTCGTAGAAATGTGATAGATATTTTACTGCTTTTAGGTGGTGTTCGTCATCTGGCACATAATATTGTATTTGCTTCAATATTAGAACAGATGAATGGGTAAGTTCCTTACTGCTATGGCCTAAAGGAGTGAGTAGAAACACTACTAACAGTGCATCTATTTGATATCTTTTAAATTCAGGGATTTATTAGACCCAAAATATTAGGGCTCTAATTGATCTTTTGTGGATGTAGTCTGTGAATTTTAATATATTGTAGACCTATTAGATACAAAATTAGAAGTTCGTGAATTGATACAAAATTCCAGAACCTATTAGACACGAAGTTGAAGGTTCATAGATATATTTGACACTTTTTTAAATTTAAAGATCCATCCTAACACTACCGCACATACTTTGTAGATTACAAACAAACTCAGTGTAACAGAGTCGTTTCCACACACTTATAAATAATGTTTCTTTTCCCTCCCAATATGGGATCTCACAATTCATCCTCCTTGTGGGTCCACCGTCCTTGCTAGCACACCGTCGGGTGTTTGGCTCTAATACCATCATTTGTAACCGCCCAAGCCACTGCTAACAAATATTGTCCTCTTTGAGCTTTCCCTTATGGGTTTCCCTAAAGATTTTAAAACACGTCAATTAGAAAGAGTTTCCACATCATATAAAGAATGTTTCGTTCCCCTCTCCAACCAACGTGGGATCTTCTCACACACCGTTTCACTAATAGAACTTATCTGCTTTCTAAAGCTTTTTCTTTCAATGTTTTGTTCATTTCACCACATGGGTCAACCTCCGTTTCAGATTCACTGGAAGAGGAACTGAGAATTTCAAATTTTGTTCATTCTGAGCAGGGTAAGATTACATTGCAGAGCTTTATGACTTTAGTTATAGGAATGAATATTTTTATATAATTGTTGTGTAACTCGGTCCTCAGGTCAAAGGTCCAGTGAAATGAGGCTCAGAAACCCATATGACAAAGGAGTTTTACAGAATGTGGAGGAGTTTATGGCGTCAAAACGATGAGAGTGGTGTTATAACGGACCATTCTCGGACAACGAATTCTTACTTTAATTTTCTGTGATCTTATATATTCTTAAAGAACATATAGATCTTATATATTCTTAAAGAACATATAG

mRNA sequence

TCTCTTTTACACAATCGAGTGGCGGTGAATTTTTGGTTGGAAAGAAATGGTGCAATTACACGAGCGGAAGAATCCGGCGAGCTTGCCGGAGCTGATCGGCGGTTCCGTAGTCTCTCTAACACTTGGTTTGCTAACTCAATGTATCCAGTTTCTTGTTCCTCACTTCTTCTCCGATTTGTCCGCCTTCATTCAACTACCATTTTCAGATTCACTGGAAGAGGAACTGAGAATTTCAAATTTTGTTCATTCTGAGCAGGGTCAAAGGTCCAGTGAAATGAGGCTCAGAAACCCATATGACAAAGGAGTTTTACAGAATGTGGAGGAGTTTATGGCGTCAAAACGATGAGAGTGGTGTTATAACGGACCATTCTCGGACAACGAATTCTTACTTTAATTTTCTGTGATCTTATATATTCTTAAAGAACATATAGATCTTATATATTCTTAAAGAACATATAG

Coding sequence (CDS)

ATGGTGCAATTACACGAGCGGAAGAATCCGGCGAGCTTGCCGGAGCTGATCGGCGGTTCCGTAGTCTCTCTAACACTTGGTTTGCTAACTCAATGTATCCAGTTTCTTGTTCCTCACTTCTTCTCCGATTTGTCCGCCTTCATTCAACTACCATTTTCAGATTCACTGGAAGAGGAACTGAGAATTTCAAATTTTGTTCATTCTGAGCAGGGTCAAAGGTCCAGTGAAATGAGGCTCAGAAACCCATATGACAAAGGAGTTTTACAGAATGTGGAGGAGTTTATGGCGTCAAAACGATGA

Protein sequence

MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFSDSLEEELRISNFVHSEQGQRSSEMRLRNPYDKGVLQNVEEFMASKR
Homology
[Close]
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match: A0A0A0KBT1 (S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G191000 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.1e-10
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLLLVLLTQSTQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match: A0A0A0KBT1 (S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G191000 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.0e-06
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 66  VHSEQGQRSSEMRLRNPYDKGVLQNVEEFMASKR 100
           V SEQGQRSSEM+ RNPYDKG+LQNV+EFM SK+
Sbjct: 284 VQSEQGQRSSEMKFRNPYDKGILQNVKEFMVSKQ 317


HSP 2 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match: A0A1S3CKT2 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match: A0A1S3CKT2 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.0e-06
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 66  VHSEQGQRSSEMRLRNPYDKGVLQNVEEFMASKR 100
           V SEQGQRSSEM+ RNPYDKG+LQNV+EFM SK+
Sbjct: 284 VQSEQGQRSSEMKFRNPYDKGILQNVKEFMVSKQ 317


HSP 2 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match: A0A1S3CMB4 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. NCBI nr
Match: KAG6570712.1 (hypothetical protein SDJN03_29627, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 6.9e-44
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFSDSLEEEL 60
           MVQLHERKNPASLPELIGGSVVSLTL LLTQCIQFLV HFFSDLSAFIQLPFSDSLEEEL
Sbjct: 1   MVQLHERKNPASLPELIGGSVVSLTLALLTQCIQFLVSHFFSDLSAFIQLPFSDSLEEEL 60

Query: 61  RISNFVHSEQGQRSSEMRLRNPYDKGVLQNVEEFMASKR 100
           RISNFVHSEQGQRSS+MR RNPYDKGVLQNVEEFMASKR
Sbjct: 61  RISNFVHSEQGQRSSDMRFRNPYDKGVLQNVEEFMASKR 99

[Close]
BLAST of CmaCh20G004090 vs. NCBI nr
Match: XP_011657160.1 (probable protein S-acyltransferase 15 [Cucumis sativus] >KGN47160.1 hypothetical protein Csa_020869 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLLLVLLTQSTQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. NCBI nr
Match: XP_011657160.1 (probable protein S-acyltransferase 15 [Cucumis sativus] >KGN47160.1 hypothetical protein Csa_020869 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-05
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 66  VHSEQGQRSSEMRLRNPYDKGVLQNVEEFMASKR 100
           V SEQGQRSSEM+ RNPYDKG+LQNV+EFM SK+
Sbjct: 284 VQSEQGQRSSEMKFRNPYDKGILQNVKEFMVSKQ 317


HSP 2 Score: 72.4 bits (176), Expect = 2.5e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. NCBI nr
Match: XP_008464143.1 (PREDICTED: probable palmitoyltransferase ZDHHC21 isoform X4 [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

[Close]
BLAST of CmaCh20G004090 vs. NCBI nr
Match: KAA0061923.1 (palmitoyltransferase akr1-like isoform X5 [Cucumis melo var. makuwa] >TYK24005.1 palmitoyltransferase akr1-like isoform X5 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0 

Query: 1  MVQLHERKNPASLPELIGGSVVSLTLGLLTQCIQFLVPHFFSDLSAFIQLPFS 54
          MV+LH+RK PA  P+LIG  +VSL L LLTQ  QFLVPHFFSDLS FIQL  S
Sbjct: 1  MVELHDRKKPAKWPDLIGRCIVSLILVLLTQSSQFLVPHFFSDLSFFIQLLLS 53

The following BLAST results are available for this feature:
BLAST of CmaCh20G004090 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh20G004090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBT19.1e-1069.81S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G191000 PE=3 SV=1[more]
A0A0A0KBT18.0e-0679.41S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G191000 PE=3 SV=1[more]
A0A1S3CKT21.2e-0969.81S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1[more]
A0A1S3CKT28.0e-0679.41S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1[more]
A0A1S3CMB41.2e-0969.81S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103502092 PE=3 SV=1[more]
BLAST of CmaCh20G004090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570712.16.9e-4495.96hypothetical protein SDJN03_29627, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011657160.11.9e-0969.81probable protein S-acyltransferase 15 [Cucumis sativus] >KGN47160.1 hypothetical... [more]
XP_011657160.11.7e-0579.41probable protein S-acyltransferase 15 [Cucumis sativus] >KGN47160.1 hypothetical... [more]
XP_008464143.12.5e-0969.81PREDICTED: probable palmitoyltransferase ZDHHC21 isoform X4 [Cucumis melo][more]
KAA0061923.12.5e-0969.81palmitoyltransferase akr1-like isoform X5 [Cucumis melo var. makuwa] >TYK24005.1... [more]
BLAST of CmaCh20G004090 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G004090.1CmaCh20G004090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018230 peptidyl-L-cysteine S-palmitoylation
biological_process GO:0006612 protein targeting to membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity