Homology
BLAST of CmaCh20G003830 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 391.0 bits (1003), Expect = 2.6e-107
Identity = 217/622 (34.89%), Postives = 339/622 (54.50%), Query Frame = 0
Query: 15 LKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVDIQFLVQ-------- 74
LK + S+ AL+S + S + N+SQ+ ++ N I L Q
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 75 -----LLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDMY 134
+ +G P + L+ + AC+ G L G Q+H+ KLGF+ N I AL+++Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 135 GKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSLS 194
KC + A F E + NVV WN ++ Y + +F +M + I P ++
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 195 GVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDK 254
+L C +L +LG Q+H +K F N V + LIDMY+K L+ + + + K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 255 NVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQIH 314
+V +WT+MI GY + +A+ R+ML ++ + + + +S+ + + +QIH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 315 CRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGIG 374
+ V GF S+ LVT YS C +E+ D I+WNA+++GF G
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 674
Query: 375 EEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNGL 434
EEAL F++M RE ID + FTF S +A + +++G+Q+H ++ KTGY V N L
Sbjct: 675 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 734
Query: 435 VSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPDD 494
+SMYA+CG+ISD++K F ++ + +SWN++++ + HG G E +D F+QM ++V+P+
Sbjct: 735 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 794
Query: 495 TSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFIE 554
+ + VL+ACSH+GL+DKG+ YF M + PK EHY VVD+ RAG L A+ FI+
Sbjct: 795 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 854
Query: 555 NIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDD 614
+PI+P +++ LLSAC+VH N +I A LLEL P DSATY++LSN+ WD
Sbjct: 855 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 914
Query: 615 AARIRRLMSNRGVKKNPGFSWM 624
R+ M +GVKK PG SW+
Sbjct: 915 RDLTRQKMKEKGVKKEPGQSWI 935
BLAST of CmaCh20G003830 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 387.9 bits (995), Expect = 2.2e-106
Identity = 187/561 (33.33%), Postives = 330/561 (58.82%), Query Frame = 0
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
+QF V++ + P + + + C L +G ++H +VK GFSL+ + + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Y KC ++ A+KVFD M ++V+WN++V GY Q G MA+ + M ++ ++P+ ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
VL S L+ +G ++HG +++ F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
+NV +W SMI Y +N+ P EAM++ ++ML +KP ++ L + + ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
H + G + N + +L++ Y + C ++ + + +SWNA+I GF+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
+AL F QMR + D FT+ S+ AI S + IHG+V ++ N+FV
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LV MYA+CGAI ++ +F M++ + +WN+++ G HG G+ +++FE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
+FL+V++ACSH GL++ GL+ F +M+ ++HY +VDL GRAG L+EA FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
+P++P +++Y A+L AC +H N + A + A++L EL P D +++L+N+ W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659
Query: 601 DAARIRRLMSNRGVKKNPGFS 622
++R M +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679
BLAST of CmaCh20G003830 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 377.9 bits (969), Expect = 2.3e-103
Identity = 195/568 (34.33%), Postives = 321/568 (56.51%), Query Frame = 0
Query: 59 VDIQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 118
V +Q QL+ + P +ILS +SAC+ L+ G Q+H+ I++ G ++ + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPF 178
D Y KC + A K+F+ M N+++W +L++GY Q A+ LF M K G++P +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
+ S +L C+ L A GTQ+H ++K ++ V LIDMY+KC L D+R+VFDI
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFD 298
+ +V + +MI GY+R + HEA+ + R+M ++P+ +T+ SLL + +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 299 QCKQIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGF 358
KQIH + G + + + L+ YS C L+D R V + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531
Query: 359 SNLGIGEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNL 418
EEAL F++++ D FTF ++ A G ++++ G++ H + K G N
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591
Query: 419 FVQNGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRT 478
++ N L+ MYA+CG+ D+ K F D++ WNS++S A HG G++ + M E+M
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651
Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHE 538
++P+ +F+ VL+ACSH GL++ GL+ F LM +E P+ EHY +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE-PETEHYVCMVSLLGRAGRLNK 711
Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
A IE +P +P ++++LLS C GN ++A A+ + P DS ++ MLSN+
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771
Query: 599 DGYWDDAARIRRLMSNRGVKKNPGFSWM 624
G W +A ++R M GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797
BLAST of CmaCh20G003830 vs. ExPASy Swiss-Prot
Match:
P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)
HSP 1 Score: 370.5 bits (950), Expect = 3.6e-101
Identity = 200/549 (36.43%), Postives = 311/549 (56.65%), Query Frame = 0
Query: 79 LSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
L + CT+ GL D G QVH ++K G LN S+ L+DMY KC A KVFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 139 CPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
NVV+W++L++G++ G +++LF EM +QGI P F+ S L C L A + G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
+HG LK+ F V VG L+DMYSKC + ++ +VF + D+++ +W +MI G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSFSCPHHFDQCKQIHCRVIVQGFE--SNNY 318
+A+ M ++K P+ T SLL + S KQIH ++ GF S+
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 319 IAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGIGEEALESFIQMRRE 378
I +LV Y + C L RK + ISW+++I G++ G EA+ F +++
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308
Query: 379 NIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
N +D F +SI + L +G+Q+ L K GL V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368
Query: 439 KKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPDDTSFLAVLTACSHV 498
+K F+ M D+ISW +++G HG G++ + +F +M R +++PD+ +LAVL+ACSH
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428
Query: 499 GLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
G++ +G E F+ + P++EHYA VVDL GRAG L EA+ I+ +PI+P + I++
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488
Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAARIRRLMSNRGV 618
LLS C VHG+ ++ K LL + + A Y+M+SN+ G+ GYW++ R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548
Query: 619 KKNPGFSWM 624
KK G SW+
Sbjct: 549 KKEAGMSWV 556
BLAST of CmaCh20G003830 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 1.1e-100
Identity = 187/530 (35.28%), Postives = 308/530 (58.11%), Query Frame = 0
Query: 95 GIQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQ 154
G Q+H I+K GF + ++LV Y K + +A+KVFDEM +V++WNS++ GY+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 155 AGCPLMAITLFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
G +++F++ML GIE ++ V GC+ + LG +H + +K FS
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
L+DMYSKC +L+ ++ VF MSD++V ++TSMI GYAR EA+ L EM +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 275 KPNYMTYNSLLSSFSCPHHFDQCKQIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYR 334
P+ T ++L+ + D+ K++H + + +++ L+ Y++ C S+++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453
Query: 335 KVCSIVTISDQISWNAVIAGFSNLGIGEEALESF-IQMRRENIDVDFFTFTSIFRAIGIG 394
V S + + D ISWN +I G+S EAL F + + + D T + A
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513
Query: 395 SALEEGRQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLL 454
SA ++GR+IHG + + GY + V N LV MYA+CGA+ + +F + DL+SW ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573
Query: 455 SGCAYHGCGEEVIDMFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLE 514
+G HG G+E I +F QMR+ ++ D+ SF+++L ACSH GL+D+G +FN+MR+
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633
Query: 515 PPKLEHYATVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
P +EHYA +VD+ R G+L +A FIEN+PI P +I+ ALL C +H + +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693
Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAARIRRLMSNRGVKKNPGFSWM 624
K+ EL P ++ Y++++N+ W+ R+R+ + RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
BLAST of CmaCh20G003830 vs. ExPASy TrEMBL
Match:
A0A6J1J8K5 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484444 PE=4 SV=1)
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD
Sbjct: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAARIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. ExPASy TrEMBL
Match:
A0A6J1FYL3 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448803 PE=4 SV=1)
HSP 1 Score: 1235.3 bits (3195), Expect = 0.0e+00
Identity = 601/623 (96.47%), Postives = 614/623 (98.56%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPL+SAAHFLKASWKSNHVSFRALISC++KDYEDD IQPSLQN+SQ QNLS+NVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVI QGFES+NYIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRREN+DVDFFTFTSIFRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAI DSKKVFSRMN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. ExPASy TrEMBL
Match:
A0A6J1D410 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica charantia OX=3673 GN=LOC111017068 PE=4 SV=1)
HSP 1 Score: 1050.8 bits (2716), Expect = 2.2e-303
Identity = 526/623 (84.43%), Postives = 566/623 (90.85%), Query Frame = 0
Query: 3 CSTRPLQSAAHFLKAS-WKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVDI 62
CSTR L+SA H LKAS W +HVSFRA IS N+ E PSL++++QK NLSDN DI
Sbjct: 5 CSTRRLRSAVHLLKASFWIPSHVSFRASISRNHTHSE-----PSLRHVTQKHNLSDNFDI 64
Query: 63 QFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDMY 122
+ L+QLLRN S PTPH+LS+TISACTKSG LDLGIQVHSAIVKLGFSLN YISSALVDMY
Sbjct: 65 ELLLQLLRNASSPTPHLLSKTISACTKSGYLDLGIQVHSAIVKLGFSLNAYISSALVDMY 124
Query: 123 GKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSLS 182
GK SMSNAQKVFDEM+CPNVV+WN+LVT YLQAG P MAITLFLEML GIEPTPFSLS
Sbjct: 125 GKYCSMSNAQKVFDEMECPNVVSWNALVTCYLQAGRPEMAITLFLEMLNVGIEPTPFSLS 184
Query: 183 GVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDK 242
GVLVGCSQLQ GKLG+QLH SLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVF+IMS++
Sbjct: 185 GVLVGCSQLQDGKLGSQLHCFSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFNIMSNR 244
Query: 243 NVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQIH 302
NVFTWTSMI+GYARNQ+P EAMVL+R ML LDLKPNYMTYNSLLSSFS H+F QCKQIH
Sbjct: 245 NVFTWTSMISGYARNQKPDEAMVLVRAMLRLDLKPNYMTYNSLLSSFSSSHNFHQCKQIH 304
Query: 303 CRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGIG 362
CR+I +GFESNNYIAA+LVTAYSECCSSLEDYRKVCS +T+ DQISWNAVIAGFSNLGIG
Sbjct: 305 CRIIAEGFESNNYIAASLVTAYSECCSSLEDYRKVCSAITMFDQISWNAVIAGFSNLGIG 364
Query: 363 EEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNGL 422
EEALE FIQMR+ NIDVDFFTFTSIFRAIGI SALEEGRQIHGLVYKTG+ LNLFVQNGL
Sbjct: 365 EEALECFIQMRQANIDVDFFTFTSIFRAIGITSALEEGRQIHGLVYKTGFALNLFVQNGL 424
Query: 423 VSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPDD 482
VSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHG GEE ID+FEQMRRTSVKPD+
Sbjct: 425 VSMYARCGAISDSKKVFSMMNEHDLISWNSLLSGCAYHGRGEEAIDLFEQMRRTSVKPDN 484
Query: 483 TSFLAVLTACSHVGLLDKGLEYFNLMRN-RLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 542
TSFL+VLTACSHVGLLDKGLEYFNLM N LLEPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 485 TSFLSVLTACSHVGLLDKGLEYFNLMINSNLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 544
Query: 543 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 602
E+I +EPG SIYK+LLSACL+HGNKDIAIRTAKK+L+LYPHD ATYIMLSNVL RDG WD
Sbjct: 545 ESITVEPGPSIYKSLLSACLIHGNKDIAIRTAKKILQLYPHDPATYIMLSNVLVRDGNWD 604
Query: 603 DAARIRRLMSNRGVKKNPGFSWM 624
DAAR+RRLMSNRGVKKNPGFSWM
Sbjct: 605 DAARVRRLMSNRGVKKNPGFSWM 622
BLAST of CmaCh20G003830 vs. ExPASy TrEMBL
Match:
A0A5A7V802 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00240 PE=4 SV=1)
HSP 1 Score: 1047.3 bits (2707), Expect = 2.5e-302
Identity = 519/626 (82.91%), Postives = 561/626 (89.62%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKAS--WKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDN 60
MYCS R L SA H LK S SNH R LISC+Y EDDSI+P LQ +
Sbjct: 1 MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60
Query: 61 VDIQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 120
VD+QFLVQLLRNGSPPTP IL++TIS CTKS LLD GIQVHSAI+KLGFSLNPYI +ALV
Sbjct: 61 VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120
Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPF 180
DMYGKCWS+S+A KVF+EM P+VV+WNSLVTGYLQAG PLMA++LFLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180
Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240
Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCK 300
+KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+SFSCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300
Query: 301 QIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNL 360
QIHCR+I +GFESNNYIAATLVTAYSEC SSLEDYRK+CS + +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360
Query: 361 GIGEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQ 420
GIGEEALE FIQMRREN DVDFFTFTSIF+AIGI SALEEG+QIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420
Query: 421 NGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVK 480
NGLVSMYARCGAI DSKKVFS MN+HDLISWNSLLSGCAYHGCGEE ID+FE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480
Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLLEPPKLEHYATVVDLFGRAGNLHEAE 540
PD+TSFLAVLTACSHVGLLDKGLEYF LMRN L+EPPKLEHYATVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540
Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600
Query: 601 YWDDAARIRRLMSNRGVKKNPGFSWM 624
YWDDAARIRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616
BLAST of CmaCh20G003830 vs. ExPASy TrEMBL
Match:
A0A1S3CKQ6 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502059 PE=4 SV=1)
HSP 1 Score: 1047.3 bits (2707), Expect = 2.5e-302
Identity = 519/626 (82.91%), Postives = 561/626 (89.62%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKAS--WKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDN 60
MYCS R L SA H LK S SNH R LISC+Y EDDSI+P LQ +
Sbjct: 1 MYCSIRLLHSAVHLLKPSSTLNSNH---RPLISCHYTHSEDDSIKPLLQT-------HNV 60
Query: 61 VDIQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 120
VD+QFLVQLLRNGSPPTP IL++TIS CTKS LLD GIQVHSAI+KLGFSLNPYI +ALV
Sbjct: 61 VDLQFLVQLLRNGSPPTPPILTKTISICTKSTLLDFGIQVHSAIIKLGFSLNPYIFTALV 120
Query: 121 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPF 180
DMYGKCWS+S+A KVF+EM P+VV+WNSLVTGYLQAG PLMA++LFLEMLK+GIEPTPF
Sbjct: 121 DMYGKCWSISDAHKVFEEMSRPSVVSWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPF 180
Query: 181 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 240
SLSGVLV CSQLQ G+LG+QLH +SLKLRFSSNVVVGTGLID+YSKCCNL+DSRRVFDIM
Sbjct: 181 SLSGVLVACSQLQKGELGSQLHAMSLKLRFSSNVVVGTGLIDVYSKCCNLDDSRRVFDIM 240
Query: 241 SDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCK 300
+KNVFTWTSMI+GYARNQ PHEAM+LMREMLHLDLKPN MTYNSLL+SFSCP HFDQCK
Sbjct: 241 QNKNVFTWTSMISGYARNQLPHEAMILMREMLHLDLKPNGMTYNSLLNSFSCPRHFDQCK 300
Query: 301 QIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNL 360
QIHCR+I +GFESNNYIAATLVTAYSEC SSLEDYRK+CS + +SDQISWNAVIAGF+NL
Sbjct: 301 QIHCRIIAEGFESNNYIAATLVTAYSECSSSLEDYRKLCSNIRMSDQISWNAVIAGFTNL 360
Query: 361 GIGEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQ 420
GIGEEALE FIQMRREN DVDFFTFTSIF+AIGI SALEEG+QIHGLVYKTGY LNL VQ
Sbjct: 361 GIGEEALECFIQMRRENFDVDFFTFTSIFKAIGITSALEEGKQIHGLVYKTGYALNLSVQ 420
Query: 421 NGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVK 480
NGLVSMYARCGAI DSKKVFS MN+HDLISWNSLLSGCAYHGCGEE ID+FE+MRRT +K
Sbjct: 421 NGLVSMYARCGAIRDSKKVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 480
Query: 481 PDDTSFLAVLTACSHVGLLDKGLEYFNLMRN-RLLEPPKLEHYATVVDLFGRAGNLHEAE 540
PD+TSFLAVLTACSHVGLLDKGLEYF LMRN L+EPPKLEHYATVVDLFGRAG L EAE
Sbjct: 481 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELIEPPKLEHYATVVDLFGRAGKLREAE 540
Query: 541 AFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDG 600
AFIE+IPIEPGISIYKALLSACL+HGNKDIAIRTAKKLLELYP+D ATYIMLSN LGRDG
Sbjct: 541 AFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDG 600
Query: 601 YWDDAARIRRLMSNRGVKKNPGFSWM 624
YWDDAARIRRLMSNRGVKK PGFSWM
Sbjct: 601 YWDDAARIRRLMSNRGVKKEPGFSWM 616
BLAST of CmaCh20G003830 vs. NCBI nr
Match:
XP_022986802.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD
Sbjct: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAARIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. NCBI nr
Match:
XP_022944325.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1235.3 bits (3195), Expect = 0.0e+00
Identity = 601/623 (96.47%), Postives = 614/623 (98.56%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPL+SAAHFLKASWKSNHVSFRALISC++KDYEDD IQPSLQN+SQ QNLS+NVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCSHKDYEDDFIQPSLQNVSQNQNLSENVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVI QGFES+NYIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAV+AGFSNLGI
Sbjct: 301 HCRVIAQGFESHNYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVLAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRREN+DVDFFTFTSIFRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENVDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAI DSKKVFSRMN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAIRDSKKVFSRMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. NCBI nr
Match:
KAG6570686.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 602/623 (96.63%), Postives = 612/623 (98.23%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPL+SAAHFLKASWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1 MYCSTRPLRSAAHFLKASWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGCPLMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL+EPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. NCBI nr
Match:
XP_023512803.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 600/623 (96.31%), Postives = 612/623 (98.23%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPL+SAA FLKASWKSNHVSFRALISCN++DYEDDSIQ SLQN+SQ QNLSDNVD
Sbjct: 1 MYCSTRPLRSAARFLKASWKSNHVSFRALISCNHEDYEDDSIQSSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMS AQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSKAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYA NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYAWNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVI QGFESNNYIAATLVTAYSECCSSLEDYRKVCS + ISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNNYIAATLVTAYSECCSSLEDYRKVCSNIKISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRRENIDVDFFTFTSIFRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFS MN+HDLISWN+LLSGCAYHGCGEEVI++FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNTLLSGCAYHGCGEEVINLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL+EPPKLEHYATVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLVEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAARIRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAARIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. NCBI nr
Match:
KAG7010533.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 598/623 (95.99%), Postives = 608/623 (97.59%), Query Frame = 0
Query: 1 MYCSTRPLQSAAHFLKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVD 60
MYCSTRPL+SAAHFLK SWKSNHVSFRALISCN+KDYEDDSIQPSLQN+SQ QNLSDNVD
Sbjct: 1 MYCSTRPLRSAAHFLKTSWKSNHVSFRALISCNHKDYEDDSIQPSLQNVSQNQNLSDNVD 60
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
IQFLVQLLRNGSPPTPHILS+TISAC KSGLLDLG+QVHSAIVKLGFSLNPYISSALVDM
Sbjct: 61 IQFLVQLLRNGSPPTPHILSKTISACAKSGLLDLGMQVHSAIVKLGFSLNPYISSALVDM 120
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYL AGC LMAIT FLEMLKQGIEPTPFSL
Sbjct: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLHAGCSLMAITWFLEMLKQGIEPTPFSL 180
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD
Sbjct: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSS SCPHHFDQCKQI
Sbjct: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSLSCPHHFDQCKQI 300
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
HCRVI QGFESN YIAATLVTAYSECCSSLEDYRKVCS +TISDQISWNAVIAGFSNLGI
Sbjct: 301 HCRVIAQGFESNKYIAATLVTAYSECCSSLEDYRKVCSNITISDQISWNAVIAGFSNLGI 360
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
GEEALE FIQMRRENIDVDFFTFTS+FRAIGIGSALEEG+QIHGLVYKTGYGLNLFVQNG
Sbjct: 361 GEEALECFIQMRRENIDVDFFTFTSMFRAIGIGSALEEGKQIHGLVYKTGYGLNLFVQNG 420
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LVSMYARCGAISDSKKVFS MN+HDLISWNSLLSGCAYHGCGEEVID+FEQMRRTSVKPD
Sbjct: 421 LVSMYARCGAISDSKKVFSTMNEHDLISWNSLLSGCAYHGCGEEVIDLFEQMRRTSVKPD 480
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
DTSFLAVLTACSHVGLLDKGLEYFNLMRNRL EPPKLEHY TVVDLFGRAGNLHEAEAFI
Sbjct: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLFEPPKLEHYTTVVDLFGRAGNLHEAEAFI 540
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD
Sbjct: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
Query: 601 DAARIRRLMSNRGVKKNPGFSWM 624
DAA IRRLMSNRGVKKNPGFSWM
Sbjct: 601 DAAGIRRLMSNRGVKKNPGFSWM 623
BLAST of CmaCh20G003830 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 391.0 bits (1003), Expect = 1.8e-108
Identity = 217/622 (34.89%), Postives = 339/622 (54.50%), Query Frame = 0
Query: 15 LKASWKSNHVSFRALISCNYKDYEDDSIQPSLQNISQKQNLSDNVDIQFLVQ-------- 74
LK + S+ AL+S + S + N+SQ+ ++ N I L Q
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 75 -----LLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDMY 134
+ +G P + L+ + AC+ G L G Q+H+ KLGF+ N I AL+++Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 135 GKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSLS 194
KC + A F E + NVV WN ++ Y + +F +M + I P ++
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 195 GVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDK 254
+L C +L +LG Q+H +K F N V + LIDMY+K L+ + + + K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 255 NVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQIH 314
+V +WT+MI GY + +A+ R+ML ++ + + + +S+ + + +QIH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 315 CRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGIG 374
+ V GF S+ LVT YS C +E+ D I+WNA+++GF G
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSR-CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 674
Query: 375 EEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNGL 434
EEAL F++M RE ID + FTF S +A + +++G+Q+H ++ KTGY V N L
Sbjct: 675 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 734
Query: 435 VSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPDD 494
+SMYA+CG+ISD++K F ++ + +SWN++++ + HG G E +D F+QM ++V+P+
Sbjct: 735 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 794
Query: 495 TSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFIE 554
+ + VL+ACSH+GL+DKG+ YF M + PK EHY VVD+ RAG L A+ FI+
Sbjct: 795 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 854
Query: 555 NIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDD 614
+PI+P +++ LLSAC+VH N +I A LLEL P DSATY++LSN+ WD
Sbjct: 855 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 914
Query: 615 AARIRRLMSNRGVKKNPGFSWM 624
R+ M +GVKK PG SW+
Sbjct: 915 RDLTRQKMKEKGVKKEPGQSWI 935
BLAST of CmaCh20G003830 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 387.9 bits (995), Expect = 1.6e-107
Identity = 187/561 (33.33%), Postives = 330/561 (58.82%), Query Frame = 0
Query: 61 IQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDM 120
+QF V++ + P + + + C L +G ++H +VK GFSL+ + + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 121 YGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSL 180
Y KC ++ A+KVFD M ++V+WN++V GY Q G MA+ + M ++ ++P+ ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 181 SGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSD 240
VL S L+ +G ++HG +++ F S V + T L+DMY+KC +LE +R++FD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 241 KNVFTWTSMITGYARNQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFDQCKQI 300
+NV +W SMI Y +N+ P EAM++ ++ML +KP ++ L + + ++ + I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 301 HCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGI 360
H + G + N + +L++ Y + C ++ + + +SWNA+I GF+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCK-CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 419
Query: 361 GEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNG 420
+AL F QMR + D FT+ S+ AI S + IHG+V ++ N+FV
Sbjct: 420 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 479
Query: 421 LVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPD 480
LV MYA+CGAI ++ +F M++ + +WN+++ G HG G+ +++FE+M++ ++KP+
Sbjct: 480 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 539
Query: 481 DTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFI 540
+FL+V++ACSH GL++ GL+ F +M+ ++HY +VDL GRAG L+EA FI
Sbjct: 540 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 599
Query: 541 ENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWD 600
+P++P +++Y A+L AC +H N + A + A++L EL P D +++L+N+ W+
Sbjct: 600 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 659
Query: 601 DAARIRRLMSNRGVKKNPGFS 622
++R M +G++K PG S
Sbjct: 660 KVGQVRVSMLRQGLRKTPGCS 679
BLAST of CmaCh20G003830 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 377.9 bits (969), Expect = 1.6e-104
Identity = 195/568 (34.33%), Postives = 321/568 (56.51%), Query Frame = 0
Query: 59 VDIQFLVQLLRNGSPPTPHILSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALV 118
V +Q QL+ + P +ILS +SAC+ L+ G Q+H+ I++ G ++ + + L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 119 DMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPF 178
D Y KC + A K+F+ M N+++W +L++GY Q A+ LF M K G++P +
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 179 SLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIM 238
+ S +L C+ L A GTQ+H ++K ++ V LIDMY+KC L D+R+VFDI
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 239 SDKNVFTWTSMITGYAR---NQQPHEAMVLMREMLHLDLKPNYMTYNSLLSSFSCPHHFD 298
+ +V + +MI GY+R + HEA+ + R+M ++P+ +T+ SLL + +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 299 QCKQIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGF 358
KQIH + G + + + L+ YS C L+D R V + + D + WN++ AG+
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CYCLKDSRLVFDEMKVKDLVIWNSMFAGY 531
Query: 359 SNLGIGEEALESFIQMRRENIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNL 418
EEAL F++++ D FTF ++ A G ++++ G++ H + K G N
Sbjct: 532 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 591
Query: 419 FVQNGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRT 478
++ N L+ MYA+CG+ D+ K F D++ WNS++S A HG G++ + M E+M
Sbjct: 592 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 651
Query: 479 SVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHE 538
++P+ +F+ VL+ACSH GL++ GL+ F LM +E P+ EHY +V L GRAG L++
Sbjct: 652 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE-PETEHYVCMVSLLGRAGRLNK 711
Query: 539 AEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGR 598
A IE +P +P ++++LLS C GN ++A A+ + P DS ++ MLSN+
Sbjct: 712 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 771
Query: 599 DGYWDDAARIRRLMSNRGVKKNPGFSWM 624
G W +A ++R M GV K PG SW+
Sbjct: 772 KGMWTEAKKVRERMKVEGVVKEPGRSWI 797
BLAST of CmaCh20G003830 vs. TAIR 10
Match:
AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 370.5 bits (950), Expect = 2.6e-102
Identity = 200/549 (36.43%), Postives = 311/549 (56.65%), Query Frame = 0
Query: 79 LSQTISACTKSGLLDLGIQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQ 138
L + CT+ GL D G QVH ++K G LN S+ L+DMY KC A KVFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 139 CPNVVTWNSLVTGYLQAGCPLMAITLFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQ 198
NVV+W++L++G++ G +++LF EM +QGI P F+ S L C L A + G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 199 LHGVSLKLRFSSNVVVGTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQ 258
+HG LK+ F V VG L+DMYSKC + ++ +VF + D+++ +W +MI G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 259 PHEAMVLMREMLHLDLK--PNYMTYNSLLSSFSCPHHFDQCKQIHCRVIVQGFE--SNNY 318
+A+ M ++K P+ T SLL + S KQIH ++ GF S+
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 319 IAATLVTAYSECCSSLEDYRKVCSIVTISDQISWNAVIAGFSNLGIGEEALESFIQMRRE 378
I +LV Y + C L RK + ISW+++I G++ G EA+ F +++
Sbjct: 249 ITGSLVDLYVK-CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 308
Query: 379 NIDVDFFTFTSIFRAIGIGSALEEGRQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDS 438
N +D F +SI + L +G+Q+ L K GL V N +V MY +CG + ++
Sbjct: 309 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 368
Query: 439 KKVFSRMNKHDLISWNSLLSGCAYHGCGEEVIDMFEQMRRTSVKPDDTSFLAVLTACSHV 498
+K F+ M D+ISW +++G HG G++ + +F +M R +++PD+ +LAVL+ACSH
Sbjct: 369 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 428
Query: 499 GLLDKGLEYFNLMRNRLLEPPKLEHYATVVDLFGRAGNLHEAEAFIENIPIEPGISIYKA 558
G++ +G E F+ + P++EHYA VVDL GRAG L EA+ I+ +PI+P + I++
Sbjct: 429 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 488
Query: 559 LLSACLVHGNKDIAIRTAKKLLELYPHDSATYIMLSNVLGRDGYWDDAARIRRLMSNRGV 618
LLS C VHG+ ++ K LL + + A Y+M+SN+ G+ GYW++ R L + +G+
Sbjct: 489 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 548
Query: 619 KKNPGFSWM 624
KK G SW+
Sbjct: 549 KKEAGMSWV 556
BLAST of CmaCh20G003830 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 369.0 bits (946), Expect = 7.5e-102
Identity = 187/530 (35.28%), Postives = 308/530 (58.11%), Query Frame = 0
Query: 95 GIQVHSAIVKLGFSLNPYISSALVDMYGKCWSMSNAQKVFDEMQCPNVVTWNSLVTGYLQ 154
G Q+H I+K GF + ++LV Y K + +A+KVFDEM +V++WNS++ GY+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 155 AGCPLMAITLFLEMLKQGIEPTPFSLSGVLVGCSQLQAGKLGTQLHGVSLKLRFSSNVVV 214
G +++F++ML GIE ++ V GC+ + LG +H + +K FS
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 215 GTGLIDMYSKCCNLEDSRRVFDIMSDKNVFTWTSMITGYARNQQPHEAMVLMREMLHLDL 274
L+DMYSKC +L+ ++ VF MSD++V ++TSMI GYAR EA+ L EM +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 275 KPNYMTYNSLLSSFSCPHHFDQCKQIHCRVIVQGFESNNYIAATLVTAYSECCSSLEDYR 334
P+ T ++L+ + D+ K++H + + +++ L+ Y++ C S+++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK-CGSMQEAE 453
Query: 335 KVCSIVTISDQISWNAVIAGFSNLGIGEEALESF-IQMRRENIDVDFFTFTSIFRAIGIG 394
V S + + D ISWN +I G+S EAL F + + + D T + A
Sbjct: 454 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 513
Query: 395 SALEEGRQIHGLVYKTGYGLNLFVQNGLVSMYARCGAISDSKKVFSRMNKHDLISWNSLL 454
SA ++GR+IHG + + GY + V N LV MYA+CGA+ + +F + DL+SW ++
Sbjct: 514 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 573
Query: 455 SGCAYHGCGEEVIDMFEQMRRTSVKPDDTSFLAVLTACSHVGLLDKGLEYFNLMRNRLLE 514
+G HG G+E I +F QMR+ ++ D+ SF+++L ACSH GL+D+G +FN+MR+
Sbjct: 574 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 633
Query: 515 PPKLEHYATVVDLFGRAGNLHEAEAFIENIPIEPGISIYKALLSACLVHGNKDIAIRTAK 574
P +EHYA +VD+ R G+L +A FIEN+PI P +I+ ALL C +H + +A + A+
Sbjct: 634 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 693
Query: 575 KLLELYPHDSATYIMLSNVLGRDGYWDDAARIRRLMSNRGVKKNPGFSWM 624
K+ EL P ++ Y++++N+ W+ R+R+ + RG++KNPG SW+
Sbjct: 694 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9SVP7 | 2.6e-107 | 34.89 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| Q3E6Q1 | 2.2e-106 | 33.33 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Q9SVA5 | 2.3e-103 | 34.33 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
| P0C898 | 3.6e-101 | 36.43 | Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... | [more] |
| Q9SN39 | 1.1e-100 | 35.28 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1J8K5 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
| A0A6J1FYL3 | 0.0e+00 | 96.47 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
| A0A6J1D410 | 2.2e-303 | 84.43 | putative pentatricopeptide repeat-containing protein At3g23330 OS=Momordica char... | [more] |
| A0A5A7V802 | 2.5e-302 | 82.91 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CKQ6 | 2.5e-302 | 82.91 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022986802.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
| XP_022944325.1 | 0.0e+00 | 96.47 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
| KAG6570686.1 | 0.0e+00 | 96.63 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| XP_023512803.1 | 0.0e+00 | 96.31 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
| KAG7010533.1 | 0.0e+00 | 95.99 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G13650.1 | 1.8e-108 | 34.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 1.6e-107 | 33.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G39530.1 | 1.6e-104 | 34.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G15130.1 | 2.6e-102 | 36.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 7.5e-102 | 35.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
