CmaCh20G002540 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G002540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	MADS-box transcription factor
Location	Cma_Chr20: 1241469 .. 1245199 (+)
RNA-Seq Expression	CmaCh20G002540
Synteny	CmaCh20G002540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATATGAAAAATTTCAATCTACTTTTCTCCTTTAAATACTTTTCCTATAAACCAAACCCTACACCTTTTTCCACCACACCCTTCACTAAAATCTGATCTCCCTTTTCTCTTCGTGTTCTTCCCTCAAAGTTGAGCTCACCCAGGTTTGTTTTCTTCAAAATCTTCAAACCCCATCTTCAAAGTTTGAATCTTTAGGTGATTTTGTGGCAGATCTAGTGACCAAAACCAAAACCCAAGTCTTTTTTTTGTGTGTTCTTTGGTTCAGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGGTAAGATTGAAATTAAACGAATTGAAAATACCACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGTTTGCTTAAAAAAGCTTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGGTTTCACAACTTCAAATTCTTCCTTCAAACAACAAAAAAATTAATCATTTCTATCTGAGCTATACAGATCTGTGGTTAAAGCTTAGGGTTTAACCTTAATTTTTTTTTTTTTGAGGAAATTAATGAATCCATGTTTTTAGGGTTTTTTTTGGCTAAAAATGTCATCCATCTATAATCCGTCACCCTAACCTGTCTGTCCCAGATGATGGTGTCATCGCCCTCATTATTTCCATTTTTTCACCCTTTTTCATTACTTTTAATGTTCTTGCTCAACTTTGCTTGGAAAAATCTGATTTTTTTCAAATGGGTTTGTTAGATAGCGTTTGATTTTATCTGGGTTTTTGTTTTTCTTCTTAATTTGTTTTTCTAAGCTTTGAATTTATTATTTTATCCTCTGATCTTAAGAGAATTGCTACAATTCAATTTCTTGATAATCAACTCATCTTGTTTAGTAAAATTAATTTTTTTTATATGATATTTGTTTTGAATTTTTAGGGTTTAATACAAAATATAATCAATTTCTTATTTACAATTTTGGCAGGTTTTTTAGTGTAGAAATTAATGAATTTTCCACACAAATGATCAAATTATGACAAAAAATTTTAAAAATTAAAAAAAAAAATTGAGAATGGATGAATAGTAATTAGAATAATTAAAAAAATGGAAAATAGTATTTTTTGTGGGTTGTACAATAATTAAATGAATAATATTAATACCATTTTCTTGCAATGTGGAAGGACCGTTCTGCCCTCTCAAACTTTAATTTGTAGCATAGAAATAGAAAAAGTTGGGAAATAGCTTCCTCTTCTTCATAGTTTCATATTTCATGCCTTTCAATCTCTCTCTCTCTCTATACCAATTTAGCTTCAGTCAACTCACAACTGGTATTCATATTAATCAAATCCGACAAGAAATTATTGTATTTTTATTATTATTATTATTATTATTATTATTATTATTTTGGGGAAATTTGAAAAATCCCATTTGAAATATTATTGATTTTAGGTTTGGGAGAGTGGAAGGGAAAGTGTGTGTAATTCATTTTCTTTTGCAATGCAAAAGAGAATCATTCTATTTCTATGAAACTTCGATCCTCTCCCCCTTATCACTAATTTAGACCCTTTTTTTCCCCTCCCTTTTTAATGATTTTAAAACCCATCAGACCCATTTATGATAGCCTCTCATTGATGCAAACAAATAGCTTAAAATCTTTCGACAAGAGCATCAATAACACGTTTTGTTAGATCCCACGTCGATTATAGAGTTACTTATAAGAGTTATGAGGCTTACGGCGATATTTAACGAGCTAAAACAGACAATATTTACTAGGTGTTTACATGTTTATGGGTATCTAGGAAGCTTAGATTTACGAAAATCATGTATTAGAGTACATATTTATCTGAGAATTACGGTGATATTAAGGGGCTAAATTGGACAATATTTGCTAGCTGTGAATTTCGATTTAGAAGTATGGATTTGTTCGAGAATTAAAGTGGATGAAGAAGAAATGGGGATGAATTTGAGAAGCATTGTCGAACGAGGAGGATTTAGAATTTAGGGTTTCGGGTTTAGAGTAATAGAAAAATGAAAAGAAATATAAAATAAGGTGGGGGGGTGTTTGTTCACACTGCAATCATGGTCGACGAAATTAAGGTATCACATGCCACCACCCATTTTCTTGGAATCCCTCCTGTCGGTTTTATTAGGTGTGATTCTCTTTCTTTTATCTATATATAATATTATATAATATTAAAGTATTTATATAATTATATTTAACATAATGTTTTTAGTTTATTAAATTTGTGGGTAATATATTTGTGAATGAATGGTTAAAAATGAGTACAATTTTTGCAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTTGCAGAAGCTAATGTACAGGTAATTACATGTTTTCTTTTTTTTTTTTTTTAAGGAACAAAAAAGTTAAAAACACAGATGAACAATTAAATATGAATTTTTTTTTACAGTTTTACCAGCAAGAAGCATCAAAGCTGAAGAGACAGATCCGAGAGATTCAGAACTCAAACAGGTTTGTTAATTAAAGTTCCAAAACACACACAAAAAAAAGAGTAAGTTTTGTATGAATTTACAGTGTGAATTTCATCTTGCTCAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGGTCTCCCCTTTTACTCGATTTCTTCAACGTTTTGATATAATTAGATTAAACTCATTACAATCGAGCGTAAGGAAATCTTTGTGTTCGAATCCCATAATGTTACTTTTCGTGTTAAAATCGTATATATTTATGCGTTTGAGTTCACTAGTGATTTAAAATCTATTCGGGTTCAAAATTGAGCGTTTTGATGGTGTGCAGAACGAAACCTTGTGTGCAGAGATGGAATTCATGCAAAAGAGGGTACGTATATAACATAATATACGAGATTATTTAGAATGATTTTTTAGATACTTAAAAAAGGGTTGAAGTTTTTCTTGGTGTAGGAAATGGAGCTTCAGAACCACAACAACTATCTAAGAGCACAGGTCAAATTCTTCACCTTTTCTCCTCGATAACACAAATCCCTCAAGAACAAAATACTCCATTTATTTCGATTATGTTGATACGTCACATTATTTATAACATCATTCACATAAATTTAGTTCGGTTTTAATAGATTGCTGAACATGAAAGAATACAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCCGACACCCATTACGCCCATCAAGACCATCTCACAGCCCTTCAGCTCGTTTAAGTGTATAACCCTCCAAACCAAAAAAAAAAAAAACACAAAAAAACACAAAAATCTTGTTGTTGTTATTATTATTATTATTATTATTCTGAATCTGCAACCAACCAACCACCGAGGATGTCAAATAATACTGCCTTTTGAAGCTCTCTGCTTCTGGCTGAGATAATCTCATGGTATTTATTTTTGTGTAGTGTTCTTATGCTTCATGCTACAATCAAAACCCTCAACATAGACTCCTTTTTATATATATATATATAAATATATTATAAAAC

mRNA sequence

ATGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGGTAAGATTGAAATTAAACGAATTGAAAATACCACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGTTTGCTTAAAAAAGCTTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTTGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCAAAGCTGAAGAGACAGATCCGAGAGATTCAGAACTCAAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGAACGAAACCTTGTGTGCAGAGATGGAATTCATGCAAAAGAGGGAAATGGAGCTTCAGAACCACAACAACTATCTAAGAGCACAGATTGCTGAACATGAAAGAATACAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCCGACACCCATTACGCCCATCAAGACCATCTCACAGCCCTTCAGCTCGTTTAAGTGTATAACCCTCCAAACCAAAAAAAAAAAAAACACAAAAAAACACAAAAATCTTGTTGTTGTTATTATTATTATTATTATTATTCTGAATCTGCAACCAACCAACCACCGAGGATGTCAAATAATACTGCCTTTTGAAGCTCTCTGCTTCTGGCTGAGATAATCTCATGGTATTTATTTTTGTGTAGTGTTCTTATGCTTCATGCTACAATCAAAACCCTCAACATAGACTCCTTTTTATATATATATATATAAATATATTATAAAAC

Coding sequence (CDS)

ATGATTTCAGCCACGGAGTTCCCAAGCCAAGCTGGAGAAGGATCTGCCTCTTCCCACAAAAAAATGGGAAGAGGTAAGATTGAAATTAAACGAATTGAAAATACCACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGTTTGCTTAAAAAAGCTTACGAGTTGTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATCGTCTTCTCCACTCGTGGCCGTCTCTATGAATATGCCAATAACAGTGTTAGAGGAACCATTGAAAGGTACAAGAAAGCATTTGCTGACTCTTCCAATTCTGGATTATCAGTTGCAGAAGCTAATGTACAGTTTTACCAGCAAGAAGCATCAAAGCTGAAGAGACAGATCCGAGAGATTCAGAACTCAAACAGGCATATTCTTGGTGAAGCACTCAGCTCATTGTCTTTAAAGGACCTGAAAAGCTTGGAGGGCAGATTGGAGAGAGGAATCAGCAAAGTTAGGGCTAAAAAGAACGAAACCTTGTGTGCAGAGATGGAATTCATGCAAAAGAGGGAAATGGAGCTTCAGAACCACAACAACTATCTAAGAGCACAGATTGCTGAACATGAAAGAATACAACAACAGCAACAAACGAACATGATGCAAAGGGGAACGTATGAGACAGTGGGAGGAGGGCAGTACGAGGAGAACAGAAGCTATGGCGGCGTGGGGCTTATGGATTCCGACACCCATTACGCCCATCAAGACCATCTCACAGCCCTTCAGCTCGTTTAA

Protein sequence

MISATEFPSQAGEGSASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV

Homology

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BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.6e-79
Identity = 168/230 (73.04%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVR TIERYKK  +DSSN+G SV+EAN QFYQQEASKL+RQIR+IQN NRHILGEALSSL
Sbjct: 61  SVRTTIERYKKVCSDSSNTG-SVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQ 201
           + K+LK+LE RLE+GIS++R+KKNE L AE+E+MQKRE+ELQN N +LRAQIAE+ER QQ
Sbjct: 121 NFKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSNLFLRAQIAENERAQQ 180

Query: 202 QQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
           Q   N+M    YE+V    Y ++++   V L+D + HY+  D  TALQLV
Sbjct: 181 QM--NLMPGSQYESVPQQPY-DSQNLLPVNLLDPNHHYSRHDQ-TALQLV 225

[Close]

BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot
Match: P29381 (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-76
Identity = 164/242 (67.77%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANNSVRGTIERYKKA +D+ N   SV EAN Q+YQQEASKL+RQIR+IQNSNRHI+G
Sbjct: 70  YEYANNSVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAE 195
           E+L SL+ K+LK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ++N YLRA+IAE
Sbjct: 130 ESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE 189

Query: 196 HERIQQQQQTNMMQRGT--YETVGGGQYEE----NRSYGGVGLMDSDTHYAHQDHLTALQ 252
             R+   QQ + + +GT  YE+ G   +++    NR+Y  V L++ +  ++ QD    LQ
Sbjct: 190 GARLNPDQQESSVIQGTTVYES-GVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQ 248

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BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot
Match: Q43585 (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.1e-75
Identity = 157/239 (65.69%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 17  SSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLY 76
           S  +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLY
Sbjct: 12  SPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLY 71

Query: 77  EYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGE 136
           EYANNSV+ TIERYKKA +DSSN+G S++EAN Q+YQQEASKL+ QI  +QN NR++LGE
Sbjct: 72  EYANNSVKATIERYKKACSDSSNTG-SISEANAQYYQQEASKLRAQIGNLQNQNRNMLGE 131

Query: 137 ALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEH 196
           +L++LSL+DLK+LE ++E+GISK+R+KKNE L AE+E+MQKRE++L N+N YLRA+IAE 
Sbjct: 132 SLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAET 191

Query: 197 ERIQQQQQTNMMQ----RGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
           ER QQQQQ   M       +YE V      + R+Y  V  + ++ HY  QD   +LQLV
Sbjct: 192 ERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQDQ-PSLQLV 248

[Close]

BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot
Match: P29385 (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.5e-74
Identity = 159/241 (65.98%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+YQQEASKL+RQIR+IQN NRHILG
Sbjct: 70  YEYANNSVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAE 195
           E+L SL+ K+LK+LE RLE+GIS+VR+KK+E L AE+E+MQKRE+ELQN N YLR++I E
Sbjct: 130 ESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE 189

Query: 196 HERIQQQQQTNMMQRGTYE-----TVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQL 252
              +QQQ+ + + Q   YE     +   GQY  NR+Y  V L++ + + ++QD    LQL
Sbjct: 190 RTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRNYIAVNLLEPNQNSSNQDQ-PPLQL 246

[Close]

BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.7e-73
Identity = 153/238 (64.29%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 14  GSASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 73
           G+ S  +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG
Sbjct: 9   GNLSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRG 68

Query: 74  RLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHI 133
           RLYEYANNSV+GTIERYKKA  DS N+  SV+EAN QFYQQEASKL+++I  IQ +NR++
Sbjct: 69  RLYEYANNSVKGTIERYKKACTDSPNTS-SVSEANAQFYQQEASKLRQEISSIQKNNRNM 128

Query: 134 LGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQI 193
           +GE+L SL+++DLK LE +LE+GIS++R+KKNE L AE+E+MQK+E++L N+N YLRA+I
Sbjct: 129 MGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKI 188

Query: 194 AEHERIQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
           AE+ER QQ    N+M   +   +   Q  + R+Y  +  +  + HY+ QD  TALQLV
Sbjct: 189 AENERAQQHM--NLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQ-TALQLV 242

[Close]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL
Match: A0A6J1FYQ9 (floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC111448972 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.2e-118
Identity = 230/233 (98.71%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
           SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIPQ 180

Query: 202 -QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
            QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV
Sbjct: 181 QQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL
Match: A0A0A0KC22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113
Identity = 231/256 (90.23%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 2   ISATEFPSQAGEGSASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCD 61
           IS TEFP+Q+GEGSASS KKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCD
Sbjct: 62  ISTTEFPNQSGEGSASSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCD 121

Query: 62  AEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKR 121
           AEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKR
Sbjct: 122 AEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKR 181

Query: 122 QIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREME 181
           QIREIQNSNRHILGEALSSL LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREME
Sbjct: 182 QIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREME 241

Query: 182 LQNHNNYLRAQIAEHERI----QQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDS 241
           LQ+HNNYLR QIAEHERI    QQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDS
Sbjct: 242 LQSHNNYLRTQIAEHERIQQQQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDS 301

Query: 242 DTHYAHQDHLTALQLV 252
           D+HYA QDHLTALQLV
Sbjct: 302 DSHYAPQDHLTALQLV 317

[Close]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL
Match: Q9ARE9 (MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.9e-105
Identity = 216/236 (91.53%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLRAQIAEHERI  
Sbjct: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRAQIAEHERIQQ 180

Query: 202 --QQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQLV 252
             QQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL
Match: A0A6J1D8F2 (agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC111017982 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96
Identity = 206/242 (85.12%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSV EANVQFYQQEASKLKRQIREIQNSNRHI+GEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVEEANVQFYQQEASKLKRQIREIQNSNRHIVGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQ 201
           SLKDLKSLEGRLERGI+KVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQI EHERI+Q
Sbjct: 121 SLKDLKSLEGRLERGITKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIGEHERIRQ 180

Query: 202 QQQTNMMQRGTYETVGGGQYE--ENRSYG--------GVGLMDSD-THYAH-QDHLTALQ 252
           QQ         YE+    QY+  ENR YG         VGLMDSD  HY H QDHLTALQ
Sbjct: 181 QQM-------QYES-AATQYDENENRGYGAAAAVAAAAVGLMDSDNNHYGHAQDHLTALQ 234

[Close]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL
Match: A0A0S3S854 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G262100 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.8e-85
Identity = 184/253 (72.73%), Postives = 213/253 (84.19%), Query Frame = 0


Query: 1   MISATEFPSQAGEGSASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC 60
           M+   E P+QA EG  SS KKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC
Sbjct: 1   MLQTMELPNQAQEG--SSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLC 60

Query: 61  DAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLK 120
           DAEVAL+VFS+RGRLYEYANNSVR TIERYKKA A S+N+  SV+E N QFYQQE+SKL+
Sbjct: 61  DAEVALVVFSSRGRLYEYANNSVRATIERYKKASAASTNAE-SVSEVNTQFYQQESSKLR 120

Query: 121 RQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREM 180
           RQIR+IQN NRHILGEAL SLSLK+LK+LEGRLE+G+S+VR++K+ETL A++EFMQKRE+
Sbjct: 121 RQIRDIQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREI 180

Query: 181 ELQNHNNYLRAQIAEHERI--QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTH 240
           ELQNHNNYLRA+IAEHER   QQQQQTNMMQ    E++    Y+  R++  V L+ SD  
Sbjct: 181 ELQNHNNYLRAKIAEHERAQQQQQQQTNMMQGTLCESLPSQSYD--RNFFPVNLIGSDQQ 240

Query: 241 YAHQDHLTALQLV 252
           Y+ QD  TALQLV
Sbjct: 241 YSRQDQ-TALQLV 247

[Close]

BLAST of CmaCh20G002540 vs. NCBI nr
Match: XP_022944555.1 (floral homeotic protein AGAMOUS-like [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 1.1e-117
Identity = 230/233 (98.71%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
           SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIPQ 180

Query: 202 -QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
            QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV
Sbjct: 181 QQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of CmaCh20G002540 vs. NCBI nr
Match: KAG6570568.1 (Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 433.7 bits (1114), Expect = 1.1e-117
Identity = 230/233 (98.71%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
           SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQ 180

Query: 202 -QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
            QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV
Sbjct: 181 QQQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of CmaCh20G002540 vs. NCBI nr
Match: XP_023512279.1 (agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 9.0e-117
Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQ 201
           SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYL+AQIAEHERIQQ
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLQAQIAEHERIQQ 180

Query: 202 QQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTAL 249
           QQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLT L
Sbjct: 181 QQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTLL 227

[Close]

BLAST of CmaCh20G002540 vs. NCBI nr
Match: XP_038900672.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900675.1 agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 417.5 bits (1072), Expect = 7.9e-113
Identity = 223/233 (95.71%), Postives = 225/233 (96.57%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
           SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERIQQ 180

Query: 202 -QQQQQTNMMQRGTYETVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQLV 252
            QQQQQTNMMQR TYETVGG   ++NRSYG VGLMDSDTHYAHQDHLTALQLV
Sbjct: 181 QQQQQQTNMMQRATYETVGGQYDDQNRSYGAVGLMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of CmaCh20G002540 vs. NCBI nr
Match: NP_001292697.1 (floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 6.1e-105
Identity = 216/236 (91.53%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 22  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 81
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 82  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 141
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120

Query: 142 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-- 201
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLRAQIAEHERI  
Sbjct: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRAQIAEHERIQQ 180

Query: 202 --QQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQLV 252
             QQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of CmaCh20G002540 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 287.7 bits (735), Expect = 8.8e-78
Identity = 164/242 (67.77%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANNSVRGTIERYKKA +D+ N   SV EAN Q+YQQEASKL+RQIR+IQNSNRHI+G
Sbjct: 70  YEYANNSVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAE 195
           E+L SL+ K+LK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ++N YLRA+IAE
Sbjct: 130 ESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE 189

Query: 196 HERIQQQQQTNMMQRGT--YETVGGGQYEE----NRSYGGVGLMDSDTHYAHQDHLTALQ 252
             R+   QQ + + +GT  YE+ G   +++    NR+Y  V L++ +  ++ QD    LQ
Sbjct: 190 GARLNPDQQESSVIQGTTVYES-GVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQ 248

[Close]

BLAST of CmaCh20G002540 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75
Identity = 159/241 (65.98%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+YQQEASKL+RQIR+IQN NRHILG
Sbjct: 70  YEYANNSVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAE 195
           E+L SL+ K+LK+LE RLE+GIS+VR+KK+E L AE+E+MQKRE+ELQN N YLR++I E
Sbjct: 130 ESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE 189

Query: 196 HERIQQQQQTNMMQRGTYE-----TVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTALQL 252
              +QQQ+ + + Q   YE     +   GQY  NR+Y  V L++ + + ++QD    LQL
Sbjct: 190 RTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRNYIAVNLLEPNQNSSNQDQ-PPLQL 246

[Close]

BLAST of CmaCh20G002540 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-74
Identity = 159/243 (65.43%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANNSVRGTIERYKKA +D+ N   ++ EAN Q+YQQEASKL+RQIR+IQN NRHILG
Sbjct: 70  YEYANNSVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKR--EMELQNHNNYLRAQI 195
           E+L SL+ K+LK+LE RLE+GIS+VR+KK+E L AE+E+MQKR  E+ELQN N YLR++I
Sbjct: 130 ESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKEIELQNDNMYLRSKI 189

Query: 196 AEHERIQQQQQTNMMQRGTYE-----TVGGGQYEENRSYGGVGLMDSDTHYAHQDHLTAL 252
            E   +QQQ+ + + Q   YE     +   GQY  NR+Y  V L++ + + ++QD    L
Sbjct: 190 TERTGLQQQESSVIHQGTVYESGVTSSHQSGQY--NRNYIAVNLLEPNQNSSNQDQ-PPL 248

[Close]

BLAST of CmaCh20G002540 vs. TAIR 10
Match: AT3G58780.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-73
Identity = 164/267 (61.42%), Postives = 199/267 (74.53%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNS-------------------------VRGTIERYKKAFADSSNSGLSVAEANVQ 135
           YEYANNS                         VRGTIERYKKA +D+ N   SV EAN Q
Sbjct: 70  YEYANNSFIYLLLEKKKKKKKKKNLWIYSSHVVRGTIERYKKACSDAVNPP-SVTEANTQ 129

Query: 136 FYQQEASKLKRQIREIQNSNRHILGEALSSLSLKDLKSLEGRLERGISKVRAKKNETLCA 195
           +YQQEASKL+RQIR+IQNSNRHI+GE+L SL+ K+LK+LEGRLE+GIS+VR+KKNE L A
Sbjct: 130 YYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVA 189

Query: 196 EMEFMQKREMELQNHNNYLRAQIAEHERIQQQQQTNMMQRGT--YETVGGGQYEE----N 252
           E+E+MQKREMELQ++N YLRA+IAE  R+   QQ + + +GT  YE+ G   +++    N
Sbjct: 190 EIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYES-GVSSHDQSQHYN 249

[Close]

BLAST of CmaCh20G002540 vs. TAIR 10
Match: AT3G58780.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 268.1 bits (684), Expect = 7.2e-72
Identity = 157/242 (64.88%), Postives = 192/242 (79.34%), Query Frame = 0


Query: 16  ASSHKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRL 75
           A S KK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRL
Sbjct: 10  AESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRL 69

Query: 76  YEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILG 135
           YEYANN       RYKKA +D+ N   SV EAN Q+YQQEASKL+RQIR+IQNSNRHI+G
Sbjct: 70  YEYANN-------RYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVG 129

Query: 136 EALSSLSLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAE 195
           E+L SL+ K+LK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ++N YLRA+IAE
Sbjct: 130 ESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE 189

Query: 196 HERIQQQQQTNMMQRGT--YETVGGGQYEE----NRSYGGVGLMDSDTHYAHQDHLTALQ 252
             R+   QQ + + +GT  YE+ G   +++    NR+Y  V L++ +  ++ QD    LQ
Sbjct: 190 GARLNPDQQESSVIQGTTVYES-GVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQ 241

The following BLAST results are available for this feature:

BLAST of CmaCh20G002540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XH4	4.6e-79	73.04	Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=...	[more]
P29381	1.2e-76	67.77	Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 ...	[more]
Q43585	3.1e-75	65.69	Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1	[more]
P29385	1.5e-74	65.98	Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 ...	[more]
Q40872	3.7e-73	64.29	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]

BLAST of CmaCh20G002540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYQ9	5.2e-118	98.71	floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A0A0KC22	1.0e-113	90.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1	[more]
Q9ARE9	2.9e-105	91.53	MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1	[more]
A0A6J1D8F2	2.5e-96	85.12	agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC11101798...	[more]
A0A0S3S854	5.8e-85	72.73	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G...	[more]

BLAST of CmaCh20G002540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944555.1	1.1e-117	98.71	floral homeotic protein AGAMOUS-like [Cucurbita moschata]	[more]
KAG6570568.1	1.1e-117	98.71	Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023512279.1	9.0e-117	99.12	agamous-like MADS-box protein AGL1 [Cucurbita pepo subsp. pepo]	[more]
XP_038900672.1	7.9e-113	95.71	agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-...	[more]
NP_001292697.1	6.1e-105	91.53	floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cuc...	[more]

BLAST of CmaCh20G002540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58780.1	8.8e-78	67.77	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	1.1e-75	65.98	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	3.5e-74	65.43	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.3	1.3e-73	61.42	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.2	7.2e-72	64.88	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..129
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 15..225
None	No IPR available	PANTHER	PTHR48019:SF103	MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN	coord: 15..225
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 24..44 score: 72.99 coord: 59..80 score: 64.02 coord: 44..59 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 22..81 e-value: 9.4E-42 score: 154.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 31..78 e-value: 2.8E-26 score: 90.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 24..78
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 22..82 score: 33.963795
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 35..97 e-value: 3.7E-28 score: 99.1
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 23..94
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 108..193 e-value: 1.3E-25 score: 89.4
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 109..199 score: 14.977144
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 23..99 e-value: 7.75781E-45 score: 143.462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G002540.1	CmaCh20G002540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding