CmaCh20G001960 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G001960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Cma_Chr20: 927193 .. 929263 (-)
RNA-Seq Expression	CmaCh20G001960
Synteny	CmaCh20G001960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCGTCCCATCTTCTTCACTTTCCCTTCCTTTTTCTATTTCCGTAGAATTACAGATACCCTCGCTCTCCCCTTTTCTCGTCCCTATATAAACACCCTTCAAAACTCACCATCACTCTGTTCTTAATTTTACGCCCATTTAGCCCTTTTCAACTAAGCTTCTTACTCATCCCGCGATTCGGTTTCGGTACGTTTCTATTCCGCCCTTTTCTCTCTGTGTGTTACTTCTAGATGGGGTTGTGATTCTCAGGGGAATGGACTTTTTAGATCTGTTTGCTAATGGAGATGGGGTTTTTGTTCTTCAGTTTCTTGGTTTAGGTTTCTCTAATGGAGATGGGGTTCTTTGTTTTTGAGTTGATTTTCGTCGCTTCCAACTCCAACCCCGTTCTCCTGAATGGATTTTTATTGGGTTTTCTTTGTTTTCTGGAAACTGTTCTATTTGTTGAACAGTAGGCAATTTTTCATGCTCTGTTTTTGCTCTGTTTTGTGTGGTGGAGCGTGGTGATGGCTTCATTGAATCATTTTGTTTTCTGGGTGTTCTTATTTGCCAAAGATCATAAGCCAATAGAACTTTTCTCAAGTGATAAACATCGATAATCTTGTTTTCTGGGTGTTCTTATTGGCTCCTTGAATCGGAAGTTCATCATGGTTTTATTAATTGTAGCTTGGGCTTGAATTCACTTTTATTAATTGTTGGGATTGATGCCTTTTTGATTTCTTCTACGCATGATTATGCCTTTCGGATCTGTTTCCCAAGTAATAGACTGATGATTCTTTTCACTTTCTAGTGGTTTGCTTGCATATGAGTGTATCTGCTTCAAAAGAAAGCTTATAGATGCTTGAATTTCTTAATTAAATAAATTGAATCATCTGGGTCTGTCAAGATCATCGTATTCTGATATTTATGGGAACTTCAGAAATCATCCAAATCATATCCCAGTTGGAGGTTTCGTGAAAGAATGTTCCAAGAACTGGCCCTTCAGATTACAATAATCTATGAGCTCAGGAACCAATGGATTAGGATGATTGTTTGGTATCTTATCACTGCTGCAATGGATGGGATGTTTTTGGTTTATTGATGAGTGCCTAGTTCGGCGTGTCTTCATAGCTTCATCTTATCCAAATTCCTGTGTTTTTTTGTCTGTTTCTGTGTGATTTTCTGATCAAATTCTGCAAGATTAATGAAATCTTGTATTGGAATTTTGTTGTCCTCTTGTTCTTCTGAGTTCTGACATTGTTTTTTGGACATGAAAACAAGACATGGAGCAGCTATACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCTTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGCCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACAGCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCTCTCAACTTCATCATCACAACTATTCTCAGTCACACAACGATTACATCGCTTCATCGATGCTTAGCTCAAGCAGTATTACAACGAACATTATCCATCCTGTGATTGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACGACAAACCTATATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTTCTTCTATTATTCTAAGCAGCTCGCTTTAGATCATTTCTAGCCATTGGATGTATATATATATAGATATAAATGTTAATACGAGCTTAGTGTAATCATGAATGGATTCACATTGCTTTGATTTGGACATTTCGTAAGCAATCGGCAAGTTGCTGCATTTGTGACCC

mRNA sequence

CATCGTCCCATCTTCTTCACTTTCCCTTCCTTTTTCTATTTCCGTAGAATTACAGATACCCTCGCTCTCCCCTTTTCTCGTCCCTATATAAACACCCTTCAAAACTCACCATCACTCTGTTCTTAATTTTACGCCCATTTAGCCCTTTTCAACTAAGCTTCTTACTCATCCCGCGATTCGGTTTCGATGGAGCAGCTATACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCTTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGCCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACAGCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCTCTCAACTTCATCATCACAACTATTCTCAGTCACACAACGATTACATCGCTTCATCGATGCTTAGCTCAAGCAGTATTACAACGAACATTATCCATCCTGTGATTGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACGACAAACCTATATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTTCTTCTATTATTCTAAGCAGCTCGCTTTAGATCATTTCTAGCCATTGGATGTATATATATATAGATATAAATGTTAATACGAGCTTAGTGTAATCATGAATGGATTCACATTGCTTTGATTTGGACATTTCGTAAGCAATCGGCAAGTTGCTGCATTTGTGACCC

Coding sequence (CDS)

ATGGAGCAGCTATACCTTGTTCCAGATGCTGATGAAGGAGTATCCCATGGCTTTGAATGCAACATATGCTTAGACTCAGTTCAAGATCCTGTTGTAACACTTTGTGGCCATCTCTTCTGTTGGCCCTGCATTTACAAATGGATCCATTACAAGAGCTTGTCCTCACAGCAACAATGCCAGCAAGAGGAATGTCGATGTCCCGTTTGCAAGGCCGAGGTCTCCCACGCCACGCTCGTCCCACTTTACGGCAAATTTCAGACTACAGCTCCCTCCAAAACTAAACCACCATCAAATCTTGGTCCAGCCATCCCACGCCGGCCTCTTGGTCCTGCCTGTGGGGCAGAGCCACCAGCATCTCCAAGCTCTCAACTTCATCATCACAACTATTCTCAGTCACACAACGATTACATCGCTTCATCGATGCTTAGCTCAAGCAGTATTACAACGAACATTATCCATCCTGTGATTGGAATGTTCGGTGACGCAGTTTACACAAGAACGTTTGGAAACACGACGACAAACCTATATACTTATCCTAATTCATATGGTCATGTAAGCAATAGTAGTGTAAGGCTGAGGAGGCACATAATGCAGGCTGATGAGTCGCTGAGCAGAATCTGTTTCTTCCTGTTTTGTTGCTTAGTGTTTCTTCTATTATTCTAA

Protein sequence

MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASPSSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF

Homology

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BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 112/225 (49.78%), Postives = 145/225 (64.44%), Query Frame = 0


Query: 9   DADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPV 68
           + +E +S GF+CNICLD V +PV+TLCGHL+CWPCIYKWI+++S+SS+   QQ+  +CPV
Sbjct: 30  EVEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQP-QCPV 89

Query: 69  CKAEVSHATLVPLYGK-FQTTAPSKTKPPSNLGPAIPRRPLGPACGAE-----PPASPSS 128
           CKAEVS  TL+PLYG+  Q+T PS+ K P NLG  IP+RP  P CG         ++PS 
Sbjct: 90  CKAEVSEKTLIPLYGRGGQSTKPSEGKAP-NLGIVIPQRPPSPRCGGHFLLPTTDSNPSQ 149

Query: 129 QLHHHNYSQS--------HNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTN 188
            L    Y Q            Y++S MLS    T N++     M G+  Y R FGN++T 
Sbjct: 150 LLQRRGYQQQSQTRQPAYQGSYMSSPMLSPGGATANMLQH--SMIGEVAYARIFGNSSTT 209

Query: 189 LYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           +YTYPNSY    +SS R+RR + QAD SL RICFFLFCC V  L+
Sbjct: 210 MYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLI 250

[Close]

BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-43
Identity = 99/218 (45.41%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 10  ADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVC 69
           +D+     F+CNICLDSVQ+PVVTLCGHLFCWPCI+KW+  +S S+  + Q+   +CPVC
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHR-QCPVC 97

Query: 70  KAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP-------SS 129
           K++VSH+TLVPLYG+ + T   + K       ++P+RP+GP    E P SP        S
Sbjct: 98  KSKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVGPVYRLEMPNSPYASTDLRLS 157

Query: 130 QLHHHNYSQSHNDYIASSMLSSSSIT-TNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNS 189
           Q  H N S     Y  S ++SS+S++ + ++ PV+ M G+ V TR FG    + + YP++
Sbjct: 158 QRVHFN-SPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDT 217

Query: 190 YGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           Y     S  R+RR IMQAD+SL RI FF  CC+V  LL
Sbjct: 218 YNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLL 247

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BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 93/232 (40.09%), Postives = 124/232 (53.45%), Query Frame = 0


Query: 4   LYLVPDADEGVSHG-FECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQE 63
           L   P A +    G F+CNICLD+  DPVVTLCGHLFCWPCIYKW+H +   S     Q 
Sbjct: 27  LTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQ--LSSVSVDQH 86

Query: 64  ECRCPVCKAEVSHATLVPLYGKFQTTAPSKT---KPPSNLGPAIPRRPLGPACGAEPPAS 123
           +  CPVCK+ ++  +LVPLYG+   ++PS T   K    L   IPRRP  P+    P  S
Sbjct: 87  QNNCPVCKSNITITSLVPLYGR-GMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITS 146

Query: 124 PSS------------QLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRT 183
            SS              H+H YS        S+ L ++++  + ++PVIGMFGD VYTR 
Sbjct: 147 ASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDL-ANAVMMSFLYPVIGMFGDLVYTRI 206

Query: 184 FGNTTTNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           FG T TN    P              + +MQ ++SL+R+  F  CC++  LL
Sbjct: 207 FG-TFTNTIAQPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLL 241

[Close]

BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.9e-29
Identity = 85/208 (40.87%), Postives = 112/208 (53.85%), Query Frame = 0


Query: 18  FECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQ-----EECRCPVCKAE 77
           F+CNICLD V+DPVVTLCGHLFCWPCI+KW  Y S +S+Q+  Q     E  +CPVCK++
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWT-YASNNSRQRVDQYDHKREPPKCPVCKSD 78

Query: 78  VSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASPSSQLHHHNYSQS 137
           VS ATLVP+YG+ Q       K P + G  +P RP GP            +     Y   
Sbjct: 79  VSEATLVPIYGRGQ-------KAPQS-GSNVPSRPTGPVYDLRGVGQRLGEGESQRYMYR 138

Query: 138 HNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNSYGHVSNSSVRL 197
             D                  PV+G+  + VY R FG +++N+  Y        + +VR 
Sbjct: 139 MPD------------------PVMGVVCEMVYRRLFGESSSNMAPY-------RDMNVRS 191

Query: 198 RRHIMQADESLSRICFFLFCCLVFLLLF 221
           RR  MQA+ESLSR+  FL  C +F+ LF
Sbjct: 199 RRRAMQAEESLSRVYLFLL-CFMFMCLF 191

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BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot
Match: Q96GF1 (E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 13  GVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVCKAE 72
           G    FECNICLD+ +D V++LCGHLFCWPC+++W+         + +     CPVCKA 
Sbjct: 32  GQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWL---------ETRPNRQVCPVCKAG 91

Query: 73  VSHATLVPLYGKFQT--TAPSKTKPPSNLG 101
           +S   ++PLYG+  T    P +  PP   G
Sbjct: 92  ISRDKVIPLYGRGSTGQQDPREKTPPRPQG 112

[Close]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL
Match: A0A6J1J9X8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111483889 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.5e-125
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ
Sbjct: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120

Query: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180
           SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN
Sbjct: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180

Query: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF 221
           SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF
Sbjct: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF 220

[Close]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL
Match: A0A6J1FXR1 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111448157 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.8e-120
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVP+ADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ
Sbjct: 1   MEQLYLVPEADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTT PSKTKPPSNLGPAIPRRPLGPACG EPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGGEPPASP 120

Query: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180
           S+QLHHHNYSQSH+DYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTT+NLYTYPN
Sbjct: 121 SAQLHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTSNLYTYPN 180

Query: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLV  LL
Sbjct: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLL 219

[Close]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL
Match: A0A6J1CHP4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111010997 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 173/223 (77.58%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 7   VPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRC 66
           V DAD G SHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKW+HYK+LS+QQQCQ +E  C
Sbjct: 29  VSDADGGASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHYKNLSAQQQCQPQENCC 88

Query: 67  PVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACG-AEPPASPSSQLH 126
           PVCKAEVSHA+LVPLYG+FQTT PS+TK  S LGPAIPRRPLGPACG AE PASPS QLH
Sbjct: 89  PVCKAEVSHASLVPLYGRFQTTNPSETK-ASQLGPAIPRRPLGPACGAAEAPASPSPQLH 148

Query: 127 HHNYSQSH---------NDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLY 186
            HNY   H          DYI SSML SSSITTNIIHPVIG FG+A+Y R FGNTTT+L+
Sbjct: 149 PHNYYLPHAHSYHPRTTQDYITSSMLGSSSITTNIIHPVIGTFGEAIYARAFGNTTTSLH 208

Query: 187 TYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           TYPNSYGHVSNSS RLRRH+MQADESLSRICFF FCCLV   L
Sbjct: 209 TYPNSYGHVSNSSARLRRHMMQADESLSRICFFFFCCLVLCFL 250

[Close]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL
Match: A0A1S3BJB6 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.1e-91
Identity = 172/222 (77.48%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 7   VPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRC 66
           + DA++  SHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKW+H K LS+ QQCQQ ECRC
Sbjct: 30  ISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHSKKLSA-QQCQQVECRC 89

Query: 67  PVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLG-PACGAEPPASPSSQLH 126
           PVCKA+VS ATL+P+YGKFQTT  SK K P NLGPAIPRRPLG  AC AE PASP+ QLH
Sbjct: 90  PVCKAKVSRATLIPIYGKFQTTDASKAKAPPNLGPAIPRRPLGWHACEAETPASPTPQLH 149

Query: 127 HHN--------YSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYT 186
            HN        YSQ+ N+YI+SSMLSSSSITTNIIHPVIGMFGD +Y RT GNTTTNLY+
Sbjct: 150 SHNYSPQSHSYYSQTQNEYISSSMLSSSSITTNIIHPVIGMFGDTIYPRTLGNTTTNLYS 209

Query: 187 YPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           YPNSYG+VSNSSVRLRRHIMQADESLSRICFF FCCLV  LL
Sbjct: 210 YPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLL 250

[Close]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL
Match: A0A0A0KB39 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.7e-91
Identity = 174/226 (76.99%), Postives = 191/226 (84.51%), Query Frame = 0


Query: 3   QLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQE 62
           Q+Y + DA++  SHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKW+H K LS+ Q+CQQ 
Sbjct: 27  QIY-ISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSA-QRCQQV 86

Query: 63  ECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLG-PACGAEPPASPS 122
           ECRCPVCKA+VS ATLVP+YGKFQTT  SK + P NLGPAIPRRPLG  AC AE PASP+
Sbjct: 87  ECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPT 146

Query: 123 SQLHHHNYS--------QSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTT 182
            QLH  NYS        Q+ N+YIASSMLSSSSITTNIIHPVIGMFGD +Y RTFGNTTT
Sbjct: 147 PQLHSDNYSPQSHSYYAQTQNEYIASSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTT 206

Query: 183 NLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           NLYTYPNSYG+V+NSSVRLRRHIMQADESLSRICFF FCCLV  LL
Sbjct: 207 NLYTYPNSYGNVNNSSVRLRRHIMQADESLSRICFFFFCCLVICLL 250

[Close]

BLAST of CmaCh20G001960 vs. NCBI nr
Match: XP_022986029.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022986030.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022986031.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 456.4 bits (1173), Expect = 1.3e-124
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ
Sbjct: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120

Query: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180
           SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN
Sbjct: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180

Query: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF 221
           SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF
Sbjct: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLLF 220

[Close]

BLAST of CmaCh20G001960 vs. NCBI nr
Match: XP_023513341.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ
Sbjct: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTT PSKTKPPSNLGPAIPRRPLGPACGAEPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120

Query: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180
           S+QLHHHNYSQSH+DYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN
Sbjct: 121 SAQLHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180

Query: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLV  LL
Sbjct: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLL 219

[Close]

BLAST of CmaCh20G001960 vs. NCBI nr
Match: XP_022943375.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022943376.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata])

HSP 1 Score: 441.0 bits (1133), Expect = 5.9e-120
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVP+ADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ
Sbjct: 1   MEQLYLVPEADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTT PSKTKPPSNLGPAIPRRPLGPACG EPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGGEPPASP 120

Query: 121 SSQLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPN 180
           S+QLHHHNYSQSH+DYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTT+NLYTYPN
Sbjct: 121 SAQLHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTSNLYTYPN 180

Query: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLV  LL
Sbjct: 181 SYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLL 219

[Close]

BLAST of CmaCh20G001960 vs. NCBI nr
Match: KAG7010371.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.4 bits (1121), Expect = 1.4e-118
Identity = 212/220 (96.36%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWI YKSLSSQQQCQ
Sbjct: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIQYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTT PSKTKPPSNLGPAIPRRPLGPACG EPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGGEPPASP 120

Query: 121 SSQL-HHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP 180
           S+QL HHHNYSQSH+DYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP
Sbjct: 121 SAQLHHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP 180

Query: 181 NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLV  LL
Sbjct: 181 NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLL 220

[Close]

BLAST of CmaCh20G001960 vs. NCBI nr
Match: KAG6570508.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.3 bits (1118), Expect = 3.2e-118
Identity = 211/220 (95.91%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MEQLYLVPDADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQ 60
           MEQLYLVPDADEGVSHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKWI YKSLSSQQQCQ
Sbjct: 1   MEQLYLVPDADEGVSHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWIQYKSLSSQQQCQ 60

Query: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP 120
           QEECRCPVCKAEVSHATLVPLYGKFQTT PSKTKPPSNLGPAIPRRPLGPACG EPPASP
Sbjct: 61  QEECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLGPACGGEPPASP 120

Query: 121 SSQL-HHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP 180
           S+QL HHHNYSQSH+DYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP
Sbjct: 121 SAQLHHHHNYSQSHDDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYP 180

Query: 181 NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLV  LL
Sbjct: 181 NSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLL 220

[Close]

BLAST of CmaCh20G001960 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44
Identity = 99/218 (45.41%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 10  ADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVC 69
           +D+     F+CNICLDSVQ+PVVTLCGHLFCWPCI+KW+  +S S+  + Q+   +CPVC
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHR-QCPVC 97

Query: 70  KAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP-------SS 129
           K++VSH+TLVPLYG+ + T   + K       ++P+RP+GP    E P SP        S
Sbjct: 98  KSKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVGPVYRLEMPNSPYASTDLRLS 157

Query: 130 QLHHHNYSQSHNDYIASSMLSSSSIT-TNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNS 189
           Q  H N S     Y  S ++SS+S++ + ++ PV+ M G+ V TR FG    + + YP++
Sbjct: 158 QRVHFN-SPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDT 217

Query: 190 YGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           Y     S  R+RR IMQAD+SL RI FF  CC+V  LL
Sbjct: 218 YNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLL 247

[Close]

BLAST of CmaCh20G001960 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44
Identity = 99/218 (45.41%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 10  ADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPVC 69
           +D+     F+CNICLDSVQ+PVVTLCGHLFCWPCI+KW+  +S S+  + Q+   +CPVC
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHR-QCPVC 97

Query: 70  KAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASP-------SS 129
           K++VSH+TLVPLYG+ + T   + K       ++P+RP+GP    E P SP        S
Sbjct: 98  KSKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVGPVYRLEMPNSPYASTDLRLS 157

Query: 130 QLHHHNYSQSHNDYIASSMLSSSSIT-TNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNS 189
           Q  H N S     Y  S ++SS+S++ + ++ PV+ M G+ V TR FG    + + YP++
Sbjct: 158 QRVHFN-SPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDT 217

Query: 190 YGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           Y     S  R+RR IMQAD+SL RI FF  CC+V  LL
Sbjct: 218 YNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLL 247

[Close]

BLAST of CmaCh20G001960 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-34
Identity = 93/232 (40.09%), Postives = 124/232 (53.45%), Query Frame = 0


Query: 4   LYLVPDADEGVSHG-FECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQE 63
           L   P A +    G F+CNICLD+  DPVVTLCGHLFCWPCIYKW+H +   S     Q 
Sbjct: 27  LTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQ--LSSVSVDQH 86

Query: 64  ECRCPVCKAEVSHATLVPLYGKFQTTAPSKT---KPPSNLGPAIPRRPLGPACGAEPPAS 123
           +  CPVCK+ ++  +LVPLYG+   ++PS T   K    L   IPRRP  P+    P  S
Sbjct: 87  QNNCPVCKSNITITSLVPLYGR-GMSSPSSTFGSKKQDALSTDIPRRP-APSALRNPITS 146

Query: 124 PSS------------QLHHHNYSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRT 183
            SS              H+H YS        S+ L ++++  + ++PVIGMFGD VYTR 
Sbjct: 147 ASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDL-ANAVMMSFLYPVIGMFGDLVYTRI 206

Query: 184 FGNTTTNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVFLLL 220
           FG T TN    P              + +MQ ++SL+R+  F  CC++  LL
Sbjct: 207 FG-TFTNTIAQPYQ-----------SQRMMQREKSLNRVSIFFLCCIILCLL 241

[Close]

BLAST of CmaCh20G001960 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 129.4 bits (324), Expect = 3.5e-30
Identity = 85/208 (40.87%), Postives = 112/208 (53.85%), Query Frame = 0


Query: 18  FECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQ-----EECRCPVCKAE 77
           F+CNICLD V+DPVVTLCGHLFCWPCI+KW  Y S +S+Q+  Q     E  +CPVCK++
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWT-YASNNSRQRVDQYDHKREPPKCPVCKSD 78

Query: 78  VSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASPSSQLHHHNYSQS 137
           VS ATLVP+YG+ Q       K P + G  +P RP GP            +     Y   
Sbjct: 79  VSEATLVPIYGRGQ-------KAPQS-GSNVPSRPTGPVYDLRGVGQRLGEGESQRYMYR 138

Query: 138 HNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLYTYPNSYGHVSNSSVRL 197
             D                  PV+G+  + VY R FG +++N+  Y        + +VR 
Sbjct: 139 MPD------------------PVMGVVCEMVYRRLFGESSSNMAPY-------RDMNVRS 191

Query: 198 RRHIMQADESLSRICFFLFCCLVFLLLF 221
           RR  MQA+ESLSR+  FL  C +F+ LF
Sbjct: 199 RRRAMQAEESLSRVYLFLL-CFMFMCLF 191

[Close]

BLAST of CmaCh20G001960 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 0


Query: 9   DADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQEECRCPV 68
           D +   S  FECNICLD  QDP+VTLCGHLFCWPC+YKW+H  S S           CPV
Sbjct: 12  DTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD---------CPV 71

Query: 69  CKAEVSHATLVPLYGKFQTTAPSKTKPPSNLGPAIPRRPLGPACGAEPPASPSSQLHHHN 128
           CKA +    LVPLYG+ +++A  ++K  S  G  +P RP G       P  P+    HH+
Sbjct: 72  CKAVIEEDRLVPLYGRGKSSADPRSK--SIPGLEVPNRPSGQRPETAQPPDPNHGFAHHH 131

Query: 129 YSQSHNDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFGNTTTNLY 177
                    A+ M S+              FG+   +  FG    +L+
Sbjct: 132 GFGGFMGGFAAPMASA-------------RFGNVTLSAAFGGLIPSLF 155

The following BLAST results are available for this feature:

BLAST of CmaCh20G001960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	1.3e-53	49.78	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	1.6e-43	45.41	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	1.3e-32	40.09	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	4.9e-29	40.87	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q96GF1	2.4e-15	42.22	E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1	[more]

BLAST of CmaCh20G001960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9X8	6.5e-125	100.00	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]
A0A6J1FXR1	2.8e-120	96.35	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CHP4	1.2e-91	77.58	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3BJB6	2.1e-91	77.48	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 ...	[more]
A0A0A0KB39	4.7e-91	76.99	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 P...	[more]

BLAST of CmaCh20G001960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986029.1	1.3e-124	100.00	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022986030.1 E3 ub...	[more]
XP_023513341.1	2.4e-121	97.72	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943375.1	5.9e-120	96.35	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022943376.1 E3 ...	[more]
KAG7010371.1	1.4e-118	96.36	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6570508.1	3.2e-118	95.91	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of CmaCh20G001960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	1.1e-44	45.41	RING membrane-anchor 1	[more]
AT4G03510.2	1.1e-44	45.41	RING membrane-anchor 1	[more]
AT4G27470.1	8.9e-34	40.09	RING membrane-anchor 3	[more]
AT4G28270.1	3.5e-30	40.87	RING membrane-anchor 2	[more]
AT1G19310.1	1.7e-24	37.50	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 20..69 e-value: 2.4E-8 score: 43.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 20..70 score: 12.858103
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 7..83 e-value: 9.2E-17 score: 62.2
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 20..67 e-value: 5.6E-8 score: 32.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..125
None	No IPR available	PANTHER	PTHR12313:SF75	SUBFAMILY NOT NAMED	coord: 8..219
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 18..71 e-value: 5.52402E-24 score: 88.13
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 14..82
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 8..219
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 35..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G001960.1	CmaCh20G001960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity