CmaCh20G001510 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G001510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NDR1/HIN1-like protein 1
Location	Cma_Chr20: 747877 .. 748512 (+)
RNA-Seq Expression	CmaCh20G001510
Synteny	CmaCh20G001510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCAACAATTCCTCCGCCGCCTCGGCATCGTGGTCCTGACCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCTTCCACATACCAAGGCCACAGAGACGTCGTCGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGTGGCCTTGTCCTTGCAGCAGGACCAGAACGTTGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACCTGGATTTCGGGGAGGTACCATTTGAACGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

mRNA sequence

ATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCAACAATTCCTCCGCCGCCTCGGCATCGTGGTCCTGACCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCTTCCACATACCAAGGCCACAGAGACGTCGTCGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGTGGCCTTGTCCTTGCAGCAGGACCAGAACGTTGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACCTGGATTTCGGGGAGGTACCATTTGAACGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

Coding sequence (CDS)

ATGAGCGCCAAGGACAAGGAAAGCGCCCACCACGACGAGGACTACCAACAATTCCTCCGCCGCCTCGGCATCGTGGTCCTGACCTTAATCATCATCCTGGGCATTGTCATCTTCATCGTATGGGCCGTCCTCCGCCCCACAAAGCCCAATTTCATCCTCCAAGACGTCACCGTTTTCGGCCTCAACGCCTCATCCTCCCCAAATCTCTTGTCCCTCAGCATGCAAGTCACCATCTCTTCCCACAACCCCAACGACCGCATCGGCATTTATTACGTCACCATGGATGTCTATGGCGCATACCGTGGCCAGCAGCTCACTCTTCCGACTCTCCTCCCTTCCACATACCAAGGCCACAGAGACGTCGTCGTTTGGTCCCCTTTCCTTAGTGGCGATGCCGTCCCCGTGGCCCCTGACGTGGCCTTGTCCTTGCAGCAGGACCAGAACGTTGGGGCGGTGTTGTTCAATGTGAAAATAGACGGGCAGGTGAAGTGGAAGGTTGGCACCTGGATTTCGGGGAGGTACCATTTGAACGTTAACTGTCCCGCGTTTATTAAATTTAGGAACCCTGACCACGCCATCGCTGTGGGTTCTGCCATGAAGTTCCAGATTGTCCAAAGCTGCAACGTTGAAGTCTGA

Protein sequence

MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV

Homology

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BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-55
Identity = 98/208 (47.12%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 6   KESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASS 65
           K+  +H    ++ +RR+   ++ ++ I+ + I ++WA+L+P+KP FILQD TV+  N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 66  S-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 125
           + PNLL+ + Q+T+SS NPN++IGIYY  +DVY  YR QQ+T PT +P TYQGH+DV +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 126 SPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G +VP+AP   +SL  D++ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 186 KFRNPDHAIAVG-SAMKFQIVQSCNVEV 212
            F N  + + VG +A+K+    SC+V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

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BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48
Identity = 95/188 (50.53%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 25  VVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPN 84
           V++  III+ I IF+VW +L+PTKP FILQD TV+  N  S PNLL+ + Q+TI+S N N
Sbjct: 24  VIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL-SQPNLLTSNFQITIASRNRN 83

Query: 85  DRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPDVALSLQ 144
            RIGIYY  + VY  YR QQ+TL T +P TYQGH++  VWSPF+ G++VP+AP  A++L 
Sbjct: 84  SRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALG 143

Query: 145 QDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFIKFRNPDHAIAVG-SAMKFQI 204
            +QN G V   ++ DG+V+WKVGT I+G+YHL+V C AFI   +    + VG +A+K+ +
Sbjct: 144 DEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYML 203

Query: 205 VQSCNVEV 212
           +  C+V V
Sbjct: 204 INKCSVNV 210

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BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 67/168 (39.88%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 20  RRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLN-ASSSPNLLSLSMQVTI 79
           ++L     T    L ++IF+VW +L P +P F L +  ++ LN  +SS +LL+ S+Q+T+
Sbjct: 25  KKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTL 84

Query: 80  SSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSGDAVPVAPD 139
            S NPN ++GIYY  + VY AYRGQQ+T    LP  YQ H ++ + + FL G  +PVA  
Sbjct: 85  FSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQS 144

Query: 140 VALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFIKF 187
               + ++++ G ++  +K+DG+++WK+GTW+SG Y  NVNC A + F
Sbjct: 145 FGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.6e-14
Identity = 46/157 (29.30%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 25  VVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASSSPNLLSLSMQVTISSHNPN 84
           V+++LI+ILG+   I W ++RP    F + D ++   + +S  N+L  ++ +T+   NPN
Sbjct: 44  VIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPN 103

Query: 85  DRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWSPFLSG-DAVPVAPDVALSL 144
            RIG+YY  ++ +  Y G++ +  TL P  YQGH++  V +P   G + V      + +L
Sbjct: 104 KRIGLYYDRIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL 163

Query: 145 QQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 181
             ++  G     +K   +V++K+G     R    V+C
Sbjct: 164 NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-10
Identity = 43/159 (27.04%), Postives = 79/159 (49.69%), Query Frame = 0


Query: 25  VVLTLIIILGIVIFIVWAVLRPTKPNFILQD--VTVFGLNASSSPNLLSLSMQVTISSHN 84
           +++T+ ++LGI   I+W + RP    F + D  +T F L+ +   N L  ++ +  +  N
Sbjct: 51  ILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPT---NNLRYNLDLNFTIRN 110

Query: 85  PNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD-VVVWSPFLSGDAVPVAPDVAL 144
           PN RIG+YY  ++V G Y  Q+  +   +   YQGH++  VV +  +    V +      
Sbjct: 111 PNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERK 170

Query: 145 SLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 181
            L +D N      + K+  ++++K G   S R+   + C
Sbjct: 171 DLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206

[Close]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL
Match: A0A6J1JI72 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484581 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 5.9e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL
Match: A0A6J1FYJ2 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448735 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDY QFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYHQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPD ALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL
Match: A0A5D3BAB6 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00260 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 188/211 (89.10%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKD++   HD+DYQQFLRRLGIV+L LIII+GI+IFIVWAVLRP+KP+FILQDVTVFG
Sbjct: 1   MSAKDEKDCGHDDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNAS SPNLLSL++QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL
Match: A0A1S3BNB5 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103491431 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 188/211 (89.10%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKD++   HD+DYQQFLRRLGIV+L LIII+GI+IFIVWAVLRP+KP+FILQDVTVFG
Sbjct: 1   MSAKDEKDCGHDDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNAS SPNLLSL++QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL
Match: A0A0A0KI64 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.8e-103
Identity = 188/212 (88.68%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MSAK-DKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVF 60
           MSAK DK+  HH++DYQQFLRRLGIV+L LIII+GI+IFIVWAVLRP+KP+FILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  GLNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHR 120
           GLNAS +PNLLSL +QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 121 DVVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180
           DVVVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 181 CPAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           CPAFIKF NPD AIA+GSAMKFQIVQSCNVEV
Sbjct: 181 CPAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 212

[Close]

BLAST of CmaCh20G001510 vs. NCBI nr
Match: XP_022987003.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. NCBI nr
Match: XP_022944220.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023513033.1 NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDY QFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYHQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPD ALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. NCBI nr
Match: KAG7010333.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417.5 bits (1072), Expect = 6.7e-113
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDY QFLRRLGIVVL LIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 287 MSAKDKESAHHDEDYHQFLRRLGIVVLILIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 346

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 347 LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 406

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPD ALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 407 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 466

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV
Sbjct: 467 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 497

[Close]

BLAST of CmaCh20G001510 vs. NCBI nr
Match: KAG6570468.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 207/211 (98.10%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDKESAHHDEDY QFLRRLGIVVL LIIILGIVIFIVWAVLRPTKPNFILQDVTVFG
Sbjct: 1   MSAKDKESAHHDEDYHQFLRRLGIVVLILIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPD ALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDAALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKFRNP+HAIAVGSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFRNPNHAIAVGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. NCBI nr
Match: XP_038901816.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.5e-107
Identity = 193/211 (91.47%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MSAKDKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFG 60
           MSAKDK+  HHD+DYQQFLRRLGIV+L LIIILG++IFI+WAVLRP+KP+FILQDVTVFG
Sbjct: 1   MSAKDKDCGHHDDDYQQFLRRLGIVLLILIIILGLIIFIIWAVLRPSKPHFILQDVTVFG 60

Query: 61  LNASSSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASSSPNLLSLS+QVTISS NPNDRIGIYY+TMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 VVVWSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180
           VVVWSPFLSGDAVPVAPDVALSLQQD+NVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVALSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           PAFIKF NPDHAIA+GSAMKFQIVQSCNVEV
Sbjct: 181 PAFIKFGNPDHAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of CmaCh20G001510 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 229.2 bits (583), Expect = 3.1e-60
Identity = 108/207 (52.17%), Postives = 147/207 (71.01%), Query Frame = 0


Query: 5   DKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNAS 64
           +KE  HH ++ ++  +R+G +VL  +  +  V+F+VWA+L P  P F+LQD T++  N  
Sbjct: 3   EKECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNV- 62

Query: 65  SSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 124
           S PN L+ ++QVT+SS NPND+IGI+Y  +D+Y +YR QQ+TL TLLP+TYQGH DV +W
Sbjct: 63  SQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIW 122

Query: 125 SPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 184
           SPFL G  VPVAP  + +L QD   G VL N+KIDG V+WKVGTW+SGRY L+VNCPA+I
Sbjct: 123 SPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYI 182

Query: 185 KFRNPDHAIAVGSAMKFQIVQSCNVEV 212
                 H    G A+K+Q+VQ C V+V
Sbjct: 183 TLAG--HFSGDGPAVKYQLVQRCAVDV 206

[Close]

BLAST of CmaCh20G001510 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-56
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 0


Query: 5   DKESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNAS 64
           D+ + + +   +  +RR+    L LI+ +  V+F+VWA+L P  P F+LQDVT+   N  
Sbjct: 7   DQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNV- 66

Query: 65  SSPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 124
           S PN LS ++QVT+SS NPND+IGI+Y  +D+Y  YR Q++TL  LLPSTYQGH +V VW
Sbjct: 67  SQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVW 126

Query: 125 SPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 184
           SPFL G AVPVAP ++ +L +D   G VL N+KIDG V+WKVG+W+SG Y L+VNCPAFI
Sbjct: 127 SPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFI 186

Query: 185 KFRNPDHAIAVGSAMKFQIVQSCNVEV 212
                      G A+K+Q+VQ C V+V
Sbjct: 187 TVTG--KLTGTGPAIKYQLVQRCAVDV 210

[Close]

BLAST of CmaCh20G001510 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 214.9 bits (546), Expect = 6.1e-56
Identity = 98/208 (47.12%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 6   KESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASS 65
           K+  +H    ++ +RR+   ++ ++ I+ + I ++WA+L+P+KP FILQD TV+  N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 66  S-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVW 125
           + PNLL+ + Q+T+SS NPN++IGIYY  +DVY  YR QQ+T PT +P TYQGH+DV +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 126 SPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G +VP+AP   +SL  D++ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 186 KFRNPDHAIAVG-SAMKFQIVQSCNVEV 212
            F N  + + VG +A+K+    SC+V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of CmaCh20G001510 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51
Identity = 98/208 (47.12%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 6   KESAHHDEDYQQFLRRLGIVVLTLIIIL-GIVIFIVWAVLRPTKPNFILQDVTVFGLNAS 65
           K+   HD  +    R++ I  +++I++L  +VI +VWA+L+P+KP F+LQD TVF  N S
Sbjct: 4   KDCGSHD-SHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVS 63

Query: 66  SS-PNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVV 125
            + PNLL+ + Q T+SS NPND+IGIYY  +DVY +YR QQ+TLP+ + +TYQGH++V V
Sbjct: 64  GNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNV 123

Query: 126 WSPFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAF 185
           WSPF+ G +VPVAP  A  L QD + GA++  + +DG+V+WKVG++I+G+YHL+V C A 
Sbjct: 124 WSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHAL 183

Query: 186 IKFRNPDHAIAVGSAMKFQIVQSCNVEV 212
           I F +    + VG   K+ + ++C+V V
Sbjct: 184 INFGSSAAGVIVG---KYMLTETCSVSV 207

[Close]

BLAST of CmaCh20G001510 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 195.3 bits (495), Expect = 5.0e-50
Identity = 95/207 (45.89%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 6   KESAHHDEDYQQFLRRLGIVVLTLIIILGIVIFIVWAVLRPTKPNFILQDVTVFGLNASS 65
           K+  +H    +  +R+L   ++  I+I+ I IF+VW +LRPTKP F+LQD TV+  N  S
Sbjct: 3   KDCGNHGGGKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNL-S 62

Query: 66  SPNLLSLSMQVTISSHNPNDRIGIYYVTMDVYGAYRGQQLTLPTLLPSTYQGHRDVVVWS 125
            PNLL+ + QVTI+S NPN +IGIYY  + VY  Y  QQ+TL T +P TYQGH++V VWS
Sbjct: 63  QPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWS 122

Query: 126 PFLSGDAVPVAPDVALSLQQDQNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCPAFIK 185
           PF+ G AVP+AP  +++L ++++ G V   ++ DG V+WKV T I+G+YH++V C AFI 
Sbjct: 123 PFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFIN 182

Query: 186 FRNPDHAIAVG-SAMKFQIVQSCNVEV 212
             N    + VG +A+K+ +   C+V V
Sbjct: 183 LGNKAAGVLVGDNAVKYTLANKCSVNV 208

The following BLAST results are available for this feature:

BLAST of CmaCh20G001510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	8.6e-55	47.12	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	1.6e-48	50.53	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	4.9e-34	39.88	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	9.6e-14	29.30	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	3.8e-10	27.04	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of CmaCh20G001510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JI72	5.9e-115	100.00	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484581 PE=4 SV=1	[more]
A0A6J1FYJ2	6.5e-114	99.05	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448735 PE=4 SV=1	[more]
A0A5D3BAB6	1.8e-103	89.10	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BNB5	1.8e-103	89.10	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103491431 PE=4 SV=1	[more]
A0A0A0KI64	8.8e-103	88.68	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 ...	[more]

BLAST of CmaCh20G001510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987003.1	1.2e-114	100.00	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_022944220.1	1.3e-113	99.05	NDR1/HIN1-like protein 1 [Cucurbita moschata] >XP_023513033.1 NDR1/HIN1-like pro...	[more]
KAG7010333.1	6.7e-113	98.58	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570468.1	2.5e-112	98.10	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901816.1	5.5e-107	91.47	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]

BLAST of CmaCh20G001510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44220.1	3.1e-60	52.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22200.1	2.1e-56	50.72	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	6.1e-56	47.12	NDR1/HIN1-like 1	[more]
AT5G06330.1	7.7e-51	47.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	5.0e-50	45.89	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 77..180 e-value: 1.5E-11 score: 44.7
None	No IPR available	PANTHER	PTHR31415:SF127	PROTEIN YLS9-LIKE	coord: 9..211
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 9..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G001510.1	CmaCh20G001510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma