CmaCh20G000380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G000380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	Cma_Chr20: 164000 .. 165229 (-)
RNA-Seq Expression	CmaCh20G000380
Synteny	CmaCh20G000380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTTTATTTCCCATCCGCCATATCACACACCATAAAGCCCCCACTCCCCTTCCTCCCCATCCATTCTGCCGCGCATTGCCATCCCTCCCAACCAAAATCATGGCCTCCAAATCCTCTTCAACTAATTATACGGCTCTCATCTCATGCGCCATCGCGCTCCTTTTTGTGGGGTTTGTGAGCTCCAACGTAGACCAGGACAGGGCAGAGTGCGCGGACCAGGTGGTTGGGCTGGCCACTTGCTTGCCGTACGTGGGCGGGGAGGCGAGAGCACCGACGCCGGACTGTTGCAGTGGGCTCAAGGTTGTGCTTGAGAAGAGTAAGAAATGTCTTTGTGTGTTGATAAAGGACCGTAATGATCCAAGCCTGGGACTTAAAGTTAATCTTACGCTTGCTCTTGGACTGCCAAATGCATGCCATGCCCCTGCCAACATCCAAGACTGCATCGGTATATTTCATCGTTATTATTCCTGTGGCTTTAGTTTGAATTTTGATGCACAATTAATCCGAAAATTAAACATAATATACAAGTTTATGTATTCTTGTTTTTGGTAATTGAGTATGTGGGTTATAGGGCTTCTCCATCTGTCGCCCAACTCCCAAGATGCTAAGGATTTTATGGGCTCCAAGGGAGCTAACACTACAGCCGCACCTGCTACTGCTGGTAATCCATATTTGTGTTTATCTCTTAATTATTTATTAAAGCGTATTTCTAAATGTTTATTAAAATAATGGTTTGCAGCGCCTGGGAATTCCACCCAAACTCCCATGGAGAAAGGTAGCGGAATGAGGAATCAATGGTTGGGTGCGGAGATGTTCATTGCGTTTCTCACTTCATCGCTTCTATTCACTTGTGTTTGGTAGTTCTATTTTAACCTTTTGTTCTTCCCTAATGTCCCAAAAATGTGAACCATCATATATGTGCTAAACTAATTGAAGTATGATTAAATGGTTAAAAGTTTTATTCTCATGGAGTTACAAATGTATATTTATATAAGGAACTGGCCTAGGATTTATCATCTCTCCTTCATAAATTAAGTTGAAAAACAACTAAATCGGACTCACTAAGGGTCTCCTAGGTTGTAGGCGTGCATAACGCACAACCCATTTGACAAACAGCCGTAATTCCTTTCTTCTCACAACCGACTATCTACTGTCTCGTCTCAAAGTTCGAGTGTTTTGCCTTCATCTTCATCTTATTTTACCCCCCTCCTTCTAAACATCTAAAAT

mRNA sequence

CTTCCTTTATTTCCCATCCGCCATATCACACACCATAAAGCCCCCACTCCCCTTCCTCCCCATCCATTCTGCCGCGCATTGCCATCCCTCCCAACCAAAATCATGGCCTCCAAATCCTCTTCAACTAATTATACGGCTCTCATCTCATGCGCCATCGCGCTCCTTTTTGTGGGGTTTGTGAGCTCCAACGTAGACCAGGACAGGGCAGAGTGCGCGGACCAGGTGGTTGGGCTGGCCACTTGCTTGCCGTACGTGGGCGGGGAGGCGAGAGCACCGACGCCGGACTGTTGCAGTGGGCTCAAGGTTGTGCTTGAGAAGAGTAAGAAATGTCTTTGTGTGTTGATAAAGGACCGTAATGATCCAAGCCTGGGACTTAAAGTTAATCTTACGCTTGCTCTTGGACTGCCAAATGCATGCCATGCCCCTGCCAACATCCAAGACTGCATCGGGCTTCTCCATCTGTCGCCCAACTCCCAAGATGCTAAGGATTTTATGGGCTCCAAGGGAGCTAACACTACAGCCGCACCTGCTACTGCTGCGCCTGGGAATTCCACCCAAACTCCCATGGAGAAAGGTAGCGGAATGAGGAATCAATGGTTGGGTGCGGAGATGTTCATTGCGTTTCTCACTTCATCGCTTCTATTCACTTGTGTTTGGTAGTTCTATTTTAACCTTTTGTTCTTCCCTAATGTCCCAAAAATGTGAACCATCATATATGTGCTAAACTAATTGAAGTATGATTAAATGGTTAAAAGTTTTATTCTCATGGAGTTACAAATGTATATTTATATAAGGAACTGGCCTAGGATTTATCATCTCTCCTTCATAAATTAAGTTGAAAAACAACTAAATCGGACTCACTAAGGGTCTCCTAGGTTGTAGGCGTGCATAACGCACAACCCATTTGACAAACAGCCGTAATTCCTTTCTTCTCACAACCGACTATCTACTGTCTCGTCTCAAAGTTCGAGTGTTTTGCCTTCATCTTCATCTTATTTTACCCCCCTCCTTCTAAACATCTAAAAT

Coding sequence (CDS)

ATGGCCTCCAAATCCTCTTCAACTAATTATACGGCTCTCATCTCATGCGCCATCGCGCTCCTTTTTGTGGGGTTTGTGAGCTCCAACGTAGACCAGGACAGGGCAGAGTGCGCGGACCAGGTGGTTGGGCTGGCCACTTGCTTGCCGTACGTGGGCGGGGAGGCGAGAGCACCGACGCCGGACTGTTGCAGTGGGCTCAAGGTTGTGCTTGAGAAGAGTAAGAAATGTCTTTGTGTGTTGATAAAGGACCGTAATGATCCAAGCCTGGGACTTAAAGTTAATCTTACGCTTGCTCTTGGACTGCCAAATGCATGCCATGCCCCTGCCAACATCCAAGACTGCATCGGGCTTCTCCATCTGTCGCCCAACTCCCAAGATGCTAAGGATTTTATGGGCTCCAAGGGAGCTAACACTACAGCCGCACCTGCTACTGCTGCGCCTGGGAATTCCACCCAAACTCCCATGGAGAAAGGTAGCGGAATGAGGAATCAATGGTTGGGTGCGGAGATGTTCATTGCGTTTCTCACTTCATCGCTTCTATTCACTTGTGTTTGGTAG

Protein sequence

MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLLFTCVW

Homology

[Close]

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.9e-39
Identity = 91/197 (46.19%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 13  LISCAIALLFVGFVSSNVD---QDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVV 72
           L++ AIAL+ V  V +  D   +D+ EC +Q+VG+ATCLPYV G+A++PTPDCCSGLK V
Sbjct: 8   LMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 67

Query: 73  LEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKD 132
           L  +KKCLCV+I+DRNDP LGL++N++LAL LP+ CHA A++  C  LLHL PNS DA+ 
Sbjct: 68  LNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQV 127

Query: 133 FMG-SKGANTT---AAPATAAPG--------------NSTQTPMEKG----SGMRNQWLG 185
           F   +KG N T   +AP  ++PG              NS +T    G         QWLG
Sbjct: 128 FYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG 187

[Close]

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 7.8e-36
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 11  TALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVL 70
           T  I+  I  + +GF +S++ QDR EC +Q++ L+TC+PYVGG+A+APT DCC+G   V+
Sbjct: 7   TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 66

Query: 71  EKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPA-NIQDCIGLLHLSPNSQDAKD 130
            KS+KC+C+L++D++DP LG+K+N TLA  LP+ACH  A NI DCI +LHL  NS  AK+
Sbjct: 67  RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 126

Query: 131 F--MGSKGANTTAAPATA----APGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLLF 182
           F  +G    N  +   T       G     P++        WLG E+ I  L S + F
Sbjct: 127 FENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLVSLIFF 184

[Close]

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 85/198 (42.93%), Postives = 117/198 (59.09%), Query Frame = 0


Query: 13  LISCAIALLFVGFV----SSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKV 72
           +++ AIAL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+A++PTPDCCSGLK 
Sbjct: 8   VMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQ 67

Query: 73  VLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAK 132
           V+    KCLC++I++RNDP LGL+VN++LAL LP+ CHA A+I  C  LLHL PNS DA+
Sbjct: 68  VINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQ 127

Query: 133 DFMG-SKGANTT-----------------AAPATAAPGNSTQTPMEKGS----GMRNQWL 185
            F   +KG N T                 + P ++A  NS +T    G+        QWL
Sbjct: 128 VFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWL 187

[Close]

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.2e-25
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 18  IALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVLEK--SKK 77
           +A++F+G V S + QD   C D +  L +CLP+V  +A+AP   CCS LKV ++K  ++K
Sbjct: 20  VAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRK 79

Query: 78  CLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKDF 131
           CLC L+KDR+DP LG KV+   A+ LP+ACH PANI  C  LLHL P+S  ++ F
Sbjct: 80  CLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIF 133

[Close]

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.7e-11
Identity = 45/145 (31.03%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 21  LFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVLEKSKKCLCVL 80
           +F+  +SS +   ++ C + ++ ++ CL Y+ G + +P   CC+ L  V++ S  CLC +
Sbjct: 12  VFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQV 71

Query: 81  IKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKDFMGSKGANTTA 140
           + +     LG+ VN T ALGLP AC    N+Q         P S+   +  G  G +T+ 
Sbjct: 72  L-NGGGSQLGINVNQTQALGLPRAC----NVQ-------TPPVSR--CNTGGGGGGSTSD 131

Query: 141 APA----TAAPGNSTQT-PMEKGSG 161
           +PA    ++ PGN ++T P+ +G G
Sbjct: 132 SPAESPNSSGPGNGSKTVPVGEGDG 142

[Close]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL
Match: A0A6J1JBX4 (protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180

Query: 181 FTCVW 186
           FTCVW
Sbjct: 181 FTCVW 185

[Close]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL
Match: A0A6J1J894 (protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.7e-97
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAP  AAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAP--AAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180

Query: 181 FTCVW 186
           FTCVW
Sbjct: 181 FTCVW 183

[Close]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL
Match: A0A6J1FVR4 (protein YLS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.9e-95
Identity = 176/185 (95.14%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALI CA+ALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALIPCAMALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAPA AAPGNSTQ+PMEKGSGMRNQW   EMFI FLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAPAFAAPGNSTQSPMEKGSGMRNQWSSVEMFIGFLTSSLL 180

Query: 181 FTCVW 186
           FTC+W
Sbjct: 181 FTCIW 185

[Close]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL
Match: A0A6J1FYE4 (protein YLS3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 175/185 (94.59%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALI CA+ALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALIPCAMALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAP  AAPGNSTQ+PMEKGSGMRNQW   EMFI FLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAP--AAPGNSTQSPMEKGSGMRNQWSSVEMFIGFLTSSLL 180

Query: 181 FTCVW 186
           FTC+W
Sbjct: 181 FTCIW 183

[Close]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL
Match: A0A0A0KZ48 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280560 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.0e-67
Identity = 133/174 (76.44%), Postives = 150/174 (86.21%), Query Frame = 0


Query: 17  AIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVLEKSKKC 76
           A+ALL VGFVSSN+DQDRAECADQVVGLATCLPYVGGEA+APTPDCCSGLK+VL+KS+KC
Sbjct: 12  ALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKC 71

Query: 77  LCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKDFMG---S 136
           LCVLIKDR+DPSLGLKVNL+LALGLP+ACHAPANI+DC+GLLHLSPNS +AKDF+G   S
Sbjct: 72  LCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNS 131

Query: 137 KGANT-TAAPATAAPGNSTQTPMEKGSG-MRNQWLGAEMFIAFLTSSLLFTCVW 186
           K  NT T A AT   G+S+Q    K  G  RNQWLG EMFI F+TSS LFTC+W
Sbjct: 132 KETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLFTCIW 185

[Close]

BLAST of CmaCh20G000380 vs. NCBI nr
Match: XP_022986686.1 (protein YLS3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180

Query: 181 FTCVW 186
           FTCVW
Sbjct: 181 FTCVW 185

[Close]

BLAST of CmaCh20G000380 vs. NCBI nr
Match: XP_022986687.1 (protein YLS3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 7.7e-97
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAP  AAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAP--AAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180

Query: 181 FTCVW 186
           FTCVW
Sbjct: 181 FTCVW 183

[Close]

BLAST of CmaCh20G000380 vs. NCBI nr
Match: XP_023512874.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 178/185 (96.22%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALISCA+ALL VGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALISCAMALLLVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMG+KGANTTAAPATAAPGNSTQTP+EKGSGMRNQWLG EMFI FLTSSLL
Sbjct: 121 SPNSQDAKDFMGTKGANTTAAPATAAPGNSTQTPVEKGSGMRNQWLGVEMFIGFLTSSLL 180

Query: 181 FTCVW 186
           FTC+W
Sbjct: 181 FTCIW 185

[Close]

BLAST of CmaCh20G000380 vs. NCBI nr
Match: KAG7010231.1 (Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTAL+SCA+ALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALMSCAMALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQ+P+EKGSGMRNQW   EMFI FLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQSPIEKGSGMRNQWSSVEMFIGFLTSSLL 180

Query: 181 FTCVW 186
           FTC+W
Sbjct: 181 FTCIW 185

[Close]

BLAST of CmaCh20G000380 vs. NCBI nr
Match: XP_022943979.1 (protein YLS3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 176/185 (95.14%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60
           MASKSSSTNYTALI CA+ALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP
Sbjct: 1   MASKSSSTNYTALIPCAMALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120
           DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 SPNSQDAKDFMGSKGANTTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLL 180
           SPNSQDAKDFMGSKGANTTAAPA AAPGNSTQ+PMEKGSGMRNQW   EMFI FLTSSLL
Sbjct: 121 SPNSQDAKDFMGSKGANTTAAPAFAAPGNSTQSPMEKGSGMRNQWSSVEMFIGFLTSSLL 180

Query: 181 FTCVW 186
           FTC+W
Sbjct: 181 FTCIW 185

[Close]

BLAST of CmaCh20G000380 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.0e-40
Identity = 91/197 (46.19%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 13  LISCAIALLFVGFVSSNVD---QDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVV 72
           L++ AIAL+ V  V +  D   +D+ EC +Q+VG+ATCLPYV G+A++PTPDCCSGLK V
Sbjct: 8   LMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 67

Query: 73  LEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKD 132
           L  +KKCLCV+I+DRNDP LGL++N++LAL LP+ CHA A++  C  LLHL PNS DA+ 
Sbjct: 68  LNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQV 127

Query: 133 FMG-SKGANTT---AAPATAAPG--------------NSTQTPMEKG----SGMRNQWLG 185
           F   +KG N T   +AP  ++PG              NS +T    G         QWLG
Sbjct: 128 FYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG 187

[Close]

BLAST of CmaCh20G000380 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 8.6e-38
Identity = 77/175 (44.00%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 11  TALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVL 70
           T  I+  I  + +GF +S++ QDR EC +Q++ L+TC+PYVGG+A+APT DCC+G   V+
Sbjct: 50  TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 109

Query: 71  EKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPA-NIQDCIGLLHLSPNSQDAKD 130
            KS+KC+C+L++D++DP LG+K+N TLA  LP+ACH  A NI DCI +LHL  NS  AK+
Sbjct: 110 RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 169

Query: 131 F--MGSKGAN-TTAAPATAAPGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLLF 182
           F  +G    N  + +P     G     P++        WLG E+ I  L S + F
Sbjct: 170 FENLGRIEDNYNSTSPTQIHKGGGKAEPVKSNGWKEKSWLGVELLIYLLVSLIFF 224

[Close]

BLAST of CmaCh20G000380 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 11  TALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVL 70
           T  I+  I  + +GF +S++ QDR EC +Q++ L+TC+PYVGG+A+APT DCC+G   V+
Sbjct: 50  TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 109

Query: 71  EKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPA-NIQDCIGLLHLSPNSQDAKD 130
            KS+KC+C+L++D++DP LG+K+N TLA  LP+ACH  A NI DCI +LHL  NS  AK+
Sbjct: 110 RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 169

Query: 131 F--MGSKGANTTAAPATA----APGNSTQTPMEKGSGMRNQWLGAEMFIAFLTSSLLF 182
           F  +G    N  +   T       G     P++        WLG E+ I  L S + F
Sbjct: 170 FENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLVSLIFF 227

[Close]

BLAST of CmaCh20G000380 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 9.5e-37
Identity = 85/198 (42.93%), Postives = 117/198 (59.09%), Query Frame = 0


Query: 13  LISCAIALLFVGFV----SSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKV 72
           +++ AIAL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+A++PTPDCCSGLK 
Sbjct: 8   VMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQ 67

Query: 73  VLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAK 132
           V+    KCLC++I++RNDP LGL+VN++LAL LP+ CHA A+I  C  LLHL PNS DA+
Sbjct: 68  VINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQ 127

Query: 133 DFMG-SKGANTT-----------------AAPATAAPGNSTQTPMEKGS----GMRNQWL 185
            F   +KG N T                 + P ++A  NS +T    G+        QWL
Sbjct: 128 VFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWL 187

[Close]

BLAST of CmaCh20G000380 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-26
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 18  IALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTPDCCSGLKVVLEK--SKK 77
           +A++F+G V S + QD   C D +  L +CLP+V  +A+AP   CCS LKV ++K  ++K
Sbjct: 20  VAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRK 79

Query: 78  CLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHLSPNSQDAKDF 131
           CLC L+KDR+DP LG KV+   A+ LP+ACH PANI  C  LLHL P+S  ++ F
Sbjct: 80  CLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIF 133

The following BLAST results are available for this feature:

BLAST of CmaCh20G000380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64865	9.9e-39	46.19	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
F4I082	7.8e-36	43.26	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
O64864	1.3e-35	42.93	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
Q9M2G1	6.2e-25	48.70	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	8.7e-11	31.03	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CmaCh20G000380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBX4	1.4e-99	100.00	protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV...	[more]
A0A6J1J894	3.7e-97	98.92	protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV...	[more]
A0A6J1FVR4	5.9e-95	95.14	protein YLS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 ...	[more]
A0A6J1FYE4	2.5e-93	94.59	protein YLS3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 ...	[more]
A0A0A0KZ48	4.0e-67	76.44	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280560 PE=4 SV...	[more]

BLAST of CmaCh20G000380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986686.1	2.8e-99	100.00	protein YLS3-like isoform X1 [Cucurbita maxima]	[more]
XP_022986687.1	7.7e-97	98.92	protein YLS3-like isoform X2 [Cucurbita maxima]	[more]
XP_023512874.1	2.2e-96	96.22	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
KAG7010231.1	3.2e-95	95.14	Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943979.1	1.2e-94	95.14	protein YLS3-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh20G000380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44300.1	7.0e-40	46.19	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.2	8.6e-38	44.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	5.6e-37	43.26	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	9.5e-37	42.93	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	4.4e-26	48.70	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..114 e-value: 2.9E-5 score: 33.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 28..114 e-value: 7.4E-12 score: 45.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 34..113 e-value: 9.3E-14 score: 53.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 36..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..159
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 11..176
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..16 score: 5.0
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 44..106 e-value: 2.08985E-16 score: 68.2222
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 11..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G000380.1	CmaCh20G000380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane