CmaCh20G000130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G000130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	importin-5
Location	Cma_Chr20: 33584 .. 35845 (-)
RNA-Seq Expression	CmaCh20G000130
Synteny	CmaCh20G000130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCCGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTTCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTTCGGAATCTTGCCGGATAGTGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCGGTGCTTGACGTCAGCCTCCTCAAGCACTGATGTGAAGATTGCGTCTTTCAATGCTGTTATCAGCTTCATACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATTACGCGGACACTAATGGAGTCGTTGAATAACGGGCAGGAGGCACCGCGCAAGAGGTACTTCAACTGCTGATCGAATTGGCCGGGATGGAGGCGAGGTTTTTAAGGCGGCAATTAGTGGATATAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTCGGACAAAGGAGCGAGGCACTTGGCGATTGAATTTGTGTTCGCTCTCGCAGAAGCCAGGGAGCGGCAGTTTTGGTTCGGCTCAGCTAATCTTCAATTTTTCCAAAAATTTATTTACACTGTTGGTGTAGGACCCTAACTTGGCTGTTATCCGAGAGAGTATGGGCAATGCCCCAAGTAAGAATTGCATGTTCACTTCTTCTGCTGAGTAAATGTACACAACTTGATTATTTTAGAACTTCTGTTGAGTAAATTTACGCAACTTGACTATCGTAGGACTTCTCCTGTTCAGTTGCTTTATGCTGATAATAAATTCTCAATTTCTTTTCTTTTATTGCTATCCATGCTCCAAGTAGGCTTATCACAAACTACTCCAACATTTCTACAGGACTCAATGGATACTTGATTGTGGTCTCTCATTCTCTATAAGTTGTGTACGGTTTTGACAGGTTGTTCCACCATGGTTAAACTGCCTACCAATAAAAGGTGACTAGGTTGAACCAAAAATTGTGCACGACCAACTTTGTTCTTTGGTGGAGAGGCAAGTTTTTAAGCTAATATTCCCTCCCCCATTGTAGTACTTGTAATTCTTACTTGAATTTTCTTTCTTATATTCCAACTATTATAGCACTAAGTTAATTTTATATATACAGGTCGGATATGGAACTCTTGGGTCCAAGTAACCAACATCTTCCCAAAATAGTTGCAGTTTTTGTCGAGGTCAGTTGGGAATTAGTATTTAATCGATTGATCATACTTAACAGTAACACGCCTGGAAGAGAACATAAAAATGGGAGGTAGGATAACGACAATTGCTTCTAACCATTAAACTGGGCGCTCTCAATCTCTTAAGTAGTGATTAAATCTAGGGTAGTGTTTGCTGGCCATATTTTAGAATGAGCCATTTATGACCCAATTCAGTGAGTGGGTGGAAATGATTTTCATGATGAGAACTACTGTAAGTTGCTCCCTTTGATTGACTGTATTCTGTATTCTGTATTCTTTATTGCATTATGATTTCAATGTTTGAGAAATGTGATCGGACAATTGGTTGTGCTGAATAGAACCAAACACATGCTAATGTGGTTGCTTTCAATGTTTTTCTTTAATCCTACCCAAAAGATGGTTTGAGACCTTCAACATTAATTGTGTGCAAAGTCGTTGATCGTTGCCTATATCTGTTTTGTATAAGCAGCGAGATGCTACTTGAGAAATTTGAGAAATGTGATCGGACAATTGGTTGTGCTGAATAGAACCAAACACATGCTAATGTGGTTGCTTTCAATGTTTTTCTTTAATCCTACCCAAAAGATGGTTTGAGACCTTCAACATTAATTGTGTGCAAAGTCGTTGATCGTTGCCTATATCTGTTTTGTATAAGCAGCGAGATGCTACTTGGTGCATGTTTAGATAACCTGGGTCAATGCTTCGTGCATCGTTCTTTTTCCTCGAGGGGAGTATTTGCTTGTGCAGGTTCTATGTGCGGGAAAGGATTTAGCAACATAGAAAACTGCCAGCCGAATGACAAGTTTGTTGAAACAGATGCAACAGAACCGCCTTCTACTTTAGCCTCAATTTGGTCCTACTTGCAACCTCAGCACCAACTTGCTTTGCAGCCTATCCTCTCATAG

mRNA sequence

ATGTCTGCCGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTTCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTTCGGAATCTTGCCGGATAGTGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCGGTGCTTGACGTCAGCCTCCTCAAGCACTGATGTGAAGATTGCGTCTTTCAATGCTGTTATCAGCTTCATACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATTACGCGGACACTAATGGAGTCGTTGAATAACGGGCAGGAGGCACCGCGCAAGAGGACCCTAACTTGGCTGTTATCCGAGAGAGTATGGGCAATGCCCCAAGTTGTTCCACCATGGTTAAACTGCCTACCAATAAAAGGTTCTATGTGCGGGAAAGGATTTAGCAACATAGAAAACTGCCAGCCGAATGACAAGTTTGTTGAAACAGATGCAACAGAACCGCCTTCTACTTTAGCCTCAATTTGGTCCTACTTGCAACCTCAGCACCAACTTGCTTTGCAGCCTATCCTCTCATAG

Coding sequence (CDS)

ATGTCTGCCGTTCTCCTCCGCAAGCAGCTAACTCGCGACGATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTATTCAAAGCGAGGACTTCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTTCGGAATCTTGCCGGATAGTGGCTGGCCAGAATGGTTGCCGTTCATGTTTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGGCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTGCACGGTGTGTTTTTGCGGTGCTTGACGTCAGCCTCCTCAAGCACTGATGTGAAGATTGCGTCTTTCAATGCTGTTATCAGCTTCATACAGTGCTTGTCCAACTCTGCTGATCGTGACAGGTTTCAGGATTTGCTGCGACCGATTACGCGGACACTAATGGAGTCGTTGAATAACGGGCAGGAGGCACCGCGCAAGAGGACCCTAACTTGGCTGTTATCCGAGAGAGTATGGGCAATGCCCCAAGTTGTTCCACCATGGTTAAACTGCCTACCAATAAAAGGTTCTATGTGCGGGAAAGGATTTAGCAACATAGAAAACTGCCAGCCGAATGACAAGTTTGTTGAAACAGATGCAACAGAACCGCCTTCTACTTTAGCCTCAATTTGGTCCTACTTGCAACCTCAGCACCAACTTGCTTTGCAGCCTATCCTCTCATAG

Protein sequence

MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGILPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTSASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTWLLSERVWAMPQVVPPWLNCLPIKGSMCGKGFSNIENCQPNDKFVETDATEPPSTLASIWSYLQPQHQLALQPILS

Homology

[Close]

BLAST of CmaCh20G000130 vs. ExPASy Swiss-Prot
Match: Q8BKC5 (Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14
Identity = 65/223 (29.15%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLR+ L+     ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  +
Sbjct: 61  MAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNL 120

Query: 61  LPDSG---WPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRC 120
           + + G   WPE L F+F  VSS ++ L+E+A  IF       G+    ++  +  + ++C
Sbjct: 121 IDEDGNNQWPEGLKFLFDSVSSQNMGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180

Query: 121 LTSASSSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 180
           +        ++  S  A  +FI     N A    F DLL    + + +S     ++  K 
Sbjct: 181 MQD-QEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKS 240

Query: 181 TLTWLLSERVWAMPQVVPPWLNC-LPIKGSMCGKGFSNIENCQ 219
                L E    +P+ + P L   L +   +CG   +N+ N Q
Sbjct: 241 -----LVEIADTVPKYLRPHLEATLQLSLKLCGD--TNLNNMQ 275

[Close]

BLAST of CmaCh20G000130 vs. ExPASy Swiss-Prot
Match: O00410 (Importin-5 OS=Homo sapiens OX=9606 GN=IPO5 PE=1 SV=4)

HSP 1 Score: 75.9 bits (185), Expect = 7.5e-13
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLR+ L+     ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  +
Sbjct: 61  MAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNL 120

Query: 61  LPDSG---WPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRC 120
           + + G   WPE L F+F  VSS ++ L+E+A  IF       G+    ++  +  + ++C
Sbjct: 121 IDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQC 180

Query: 121 LTSASSSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 180
           +        ++  S  A  +FI     N A    F DLL    + + +S     ++  K 
Sbjct: 181 MQD-QEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKS 240

Query: 181 TLTWLLSERVWAMPQVVPPWLNC-LPIKGSMCG 209
                L E    +P+ + P L   L +   +CG
Sbjct: 241 -----LVEIADTVPKYLRPHLEATLQLSLKLCG 267

[Close]

BLAST of CmaCh20G000130 vs. ExPASy Swiss-Prot
Match: Q54EW3 (Probable importin-5 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0291650 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.6e-08
Identity = 45/183 (24.59%), Postives = 92/183 (50.27%), Query Frame = 0


Query: 4   VLLRKQLTRDDS-YLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGILP 63
           VLLR  +  +DS  +   L P +  +LK+ L+  ++ E    I   + + ++ LA  ++P
Sbjct: 61  VLLRTLVNGNDSGNILKGLKPETLVTLKTELMFAVREEPKNHIRHSILNVIAILAIQLVP 120

Query: 64  DSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQL--SHSTGDTLVPHIKHLHGVFLRCLTS 123
           +  WPE L F+ +  SS    L+ES+F +   +       +TL PH      +  + L  
Sbjct: 121 EQKWPEILSFIIESSSSPEENLRESSFYLIGAIIDDSRVAETLAPHFDKFALLVEKGLND 180

Query: 124 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESL-NNGQEAPRKRTLT 183
            S+   V++++   V +FI   +N    + F+ L+  +  T+ +++ +N ++  +K  LT
Sbjct: 181 PSAK--VQVSALETVSTFID--ANPEKAEVFKPLIPAMLNTIQKTIESNLEKEAQKGILT 239

[Close]

BLAST of CmaCh20G000130 vs. ExPASy Swiss-Prot
Match: O74476 (Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sal3 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 42/156 (26.92%), Postives = 65/156 (41.67%), Query Frame = 0


Query: 21  LNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGILPDSG-WPEWLPFMFQCVSS 80
           ++  S+ SL+S LL+C   E   ++  KLCDT++E+A  I    G WPE +  +F  V+S
Sbjct: 91  ISNESKQSLQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQGEWPELINVIFNAVNS 150

Query: 81  DSLKLQESAFLIFAQLSH-------------STG---DTLVPHIKHLHGVFLRCLTSASS 140
                +ES F     L               +TG    ++   I          L S  S
Sbjct: 151 PDESFRESVFRTITSLPRLLSGQDSAVTPLFTTGLADPSIRVRISAARAYSAVILESKQS 210

Query: 141 STDVKIASFNAVISFIQCLSNSADRDRFQDLLRPIT 160
           + D  I    ++++ +  L    D D   D L  IT
Sbjct: 211 TRDQVIPLLPSLMNILPPLQQDRDSDNLADCLMAIT 246

[Close]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL
Match: A0A6J1JEL6 (uncharacterized protein LOC111483722 OS=Cucurbita maxima OX=3661 GN=LOC111483722 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI
Sbjct: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS
Sbjct: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 177
           ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR
Sbjct: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 176

[Close]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL
Match: A0A5A7TEZ0 (Importin-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001040 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.8e-79
Identity = 155/182 (85.16%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            +SSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL
Match: A0A0A0L0C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268110 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.8e-79
Identity = 155/182 (85.16%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            +SSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL
Match: A0A1S3BNQ2 (importin-5 OS=Cucumis melo OX=3656 GN=LOC103491628 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.8e-79
Identity = 155/182 (85.16%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 76  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            +SSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 196 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL
Match: A0A6J1DLM2 (importin-5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.4e-78
Identity = 154/182 (84.62%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ E+ KSISKKLCDTVSELA GI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREESKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            SSSTDVKIA+ NAVISFIQCLSNS DRDRFQDLL P+ RTLME+LNNGQE   +  L  
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSGDRDRFQDLLPPMMRTLMEALNNGQETTAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. NCBI nr
Match: XP_022985768.1 (uncharacterized protein LOC111483722 [Cucurbita maxima] >XP_022985769.1 uncharacterized protein LOC111483722 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-93
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI
Sbjct: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS
Sbjct: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 177
           ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR
Sbjct: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKR 176

[Close]

BLAST of CmaCh20G000130 vs. NCBI nr
Match: KAG6570316.1 (Importin-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.6 bits (841), Expect = 4.9e-86
Identity = 165/182 (90.66%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSED KSISKKLCDTVSELA GI
Sbjct: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGI 60

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFL+CLTS
Sbjct: 61  LPDNGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLQCLTS 120

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
           AS STDVKIASFNAVISF+QCLSNSADRDRFQDLLRP+TRTLMESL+N QEA  +  L  
Sbjct: 121 ASPSTDVKIASFNAVISFVQCLSNSADRDRFQDLLRPMTRTLMESLDNAQEATAQGVLEL 180

Query: 181 LL 183
           L+
Sbjct: 181 LI 182

[Close]

BLAST of CmaCh20G000130 vs. NCBI nr
Match: XP_038900350.1 (importin-5 isoform X1 [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 2.6e-79
Identity = 156/182 (85.71%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSD+ KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDTPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            SSSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. NCBI nr
Match: XP_038900351.1 (importin-5 isoform X2 [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 2.6e-79
Identity = 156/182 (85.71%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           MSAVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 76  MSAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSD+ KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 136 LPDNGWPELLPFMFQCVSSDTPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            SSSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 196 TSSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

[Close]

BLAST of CmaCh20G000130 vs. NCBI nr
Match: KAE8649420.1 (hypothetical protein Csa_021659 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 5.8e-79
Identity = 155/182 (85.16%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLRKQLTRDDSYLWPRLNPSSQ SLKSILLSCIQ ED KSISKKLCDTVSELA GI
Sbjct: 45  MAAVLLRKQLTRDDSYLWPRLNPSSQSSLKSILLSCIQREDSKSISKKLCDTVSELASGI 104

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LPD+GWPE LPFMFQCVSSDS KLQESAFLIFAQLSH  GDTLVPHIKHLHGVFL+CLTS
Sbjct: 105 LPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSHYIGDTLVPHIKHLHGVFLQCLTS 164

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            +SSTDVKIA+ NAVISFIQCLSNSADRDRFQDLL P+ RTLME+LNNGQEA  +  L  
Sbjct: 165 TTSSTDVKIAALNAVISFIQCLSNSADRDRFQDLLPPMMRTLMEALNNGQEATAQEALEL 224

Query: 181 LL 183
           L+
Sbjct: 225 LI 226

[Close]

BLAST of CmaCh20G000130 vs. TAIR 10
Match: AT5G19820.1 (ARM repeat superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-66
Identity = 126/182 (69.23%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           M+AVLLRK LTRDD+YLWPRL+ S+Q SLKS +L CIQ E+ KSISKK+CDTVSELA GI
Sbjct: 76  MAAVLLRKLLTRDDAYLWPRLSLSTQSSLKSSMLYCIQHEEAKSISKKICDTVSELASGI 135

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           LP++GWPE LPF+FQCV+S + KLQESAFLI AQLS   G+TL PHIK LHGVFL+CL+S
Sbjct: 136 LPENGWPELLPFVFQCVTSVTPKLQESAFLILAQLSQYVGETLTPHIKELHGVFLQCLSS 195

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQEAPRKRTLTW 180
            S+S+DVKIA+ NAVISF+QCL+NS +RDRFQD+L  + RTL ESLNNG EA  +  L  
Sbjct: 196 NSASSDVKIAALNAVISFVQCLANSTERDRFQDVLPAMIRTLTESLNNGNEATAQEALEL 255

Query: 181 LL 183
           L+
Sbjct: 256 LI 257

HSP 2 Score: 38.1 bits (87), Expect = 1.2e-02
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 0


Query: 229  TEPPSTLASIWSYLQPQHQLALQPILS 256
            T PPS LAS WS L+P+ QLALQ +LS
Sbjct: 1089 TLPPSALASTWSTLKPEQQLALQSMLS 1115

[Close]

BLAST of CmaCh20G000130 vs. TAIR 10
Match: AT4G27640.1 (ARM repeat superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-17
Identity = 50/171 (29.24%), Postives = 93/171 (54.39%), Query Frame = 0


Query: 1   MSAVLLRKQLTRDDSYLWPRLNPSSQFSLKSILLSCIQSEDFKSISKKLCDTVSELAFGI 60
           ++AVLLRK++T      W +L+P  +  +K  L+  I  E+   + +   + VS +A   
Sbjct: 55  LAAVLLRKRITGH----WAKLSPQLKQHVKQSLIESITVENSPPVRRASANVVSVVAKYA 114

Query: 61  LPDSGWPEWLPFMFQCVSSDSLKLQESAFLIFAQLSHSTGDTLVPHIKHLHGVFLRCLTS 120
           +P   WP+ L F+FQC  S     +E A ++F+ L+ + G+T  P+   L  + L+C+  
Sbjct: 115 VPAGEWPDLLTFLFQCSQSAQEDHREVALILFSSLTETIGNTFRPYFADLQALLLKCMQD 174

Query: 121 ASSSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPITRTLMESLNNGQE 172
            SSS  V++A+  AV SF++  ++  +  +F+D +  I     + + +G+E
Sbjct: 175 ESSSR-VRVAALKAVGSFLEFTNDGDEVVKFRDFIPSILDVSRKCIASGEE 220

The following BLAST results are available for this feature:

BLAST of CmaCh20G000130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BKC5	6.8e-14	29.15	Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3	[more]
O00410	7.5e-13	29.11	Importin-5 OS=Homo sapiens OX=9606 GN=IPO5 PE=1 SV=4	[more]
Q54EW3	5.6e-08	24.59	Probable importin-5 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0291650...	[more]
O74476	1.2e-05	26.92	Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O...	[more]

BLAST of CmaCh20G000130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEL6	2.0e-93	100.00	uncharacterized protein LOC111483722 OS=Cucurbita maxima OX=3661 GN=LOC111483722...	[more]
A0A5A7TEZ0	2.8e-79	85.16	Importin-5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001040 PE...	[more]
A0A0A0L0C1	2.8e-79	85.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268110 PE=4 SV=1	[more]
A0A1S3BNQ2	2.8e-79	85.16	importin-5 OS=Cucumis melo OX=3656 GN=LOC103491628 PE=4 SV=1	[more]
A0A6J1DLM2	1.4e-78	84.62	importin-5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021191 PE=4 S...	[more]

BLAST of CmaCh20G000130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985768.1	4.2e-93	100.00	uncharacterized protein LOC111483722 [Cucurbita maxima] >XP_022985769.1 uncharac...	[more]
KAG6570316.1	4.9e-86	90.66	Importin-5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038900350.1	2.6e-79	85.71	importin-5 isoform X1 [Benincasa hispida]	[more]
XP_038900351.1	2.6e-79	85.71	importin-5 isoform X2 [Benincasa hispida]	[more]
KAE8649420.1	5.8e-79	85.16	hypothetical protein Csa_021659 [Cucumis sativus]	[more]

BLAST of CmaCh20G000130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19820.1	1.2e-66	69.23	ARM repeat superfamily protein	[more]
AT4G27640.1	4.0e-17	29.24	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..184 e-value: 4.3E-41 score: 142.8
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 1..182
None	No IPR available	PANTHER	PTHR10527:SF79	ARM REPEAT SUPERFAMILY PROTEIN	coord: 1..182
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G000130.1	CmaCh20G000130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0061608	nuclear import signal receptor activity
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0031267	small GTPase binding