CmaCh20G000080 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGAGTGGGGAGGGGAGGTTGTGAATTCAGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGGTCATTTTCCTGAAGAGGGATTTGGGAAGGCAAGTTATTTTAGGGACATTCAAGTTGTTGACAGCTCNNNNNNNNNNATATTTTATTATAAGGCAAATATCTAATATTTATCTTATTATCATAGGTATCGTTATTTTCATTTATTACTATTTCCATATCATTGTAATTTATTTGATTATAAATAAGGTAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACATGGTATTAGAGCCCTCTCCGTTTCTTTTCAATGGCTTTTGAATCCTCTAATATTCTTCTCCACCACCCCTGCTGCTTTGACGCCGCAGGGGCAGTCTTCATGGCTGTCGTAGTCGGAGCCGATTGATTACTCTTCGGCTCCACCCTATTGACCTCTAAATCACCTTTCGTCATACTCTGTACATACAACCTCACCTTTTCCATCCATCCAACCCAATCGGTTTTCCCTTTGGCCAATATAGTCTCTCTCATTTTCTTCCCAATCAACCTTCATCCTTCACATAAACCCTAACCTAAACCTATCAACCTTTTGTAGAGATTTACCTTCGGAATCTGGGTGCCGCACTAGCCTATTCGCCAACCAAGTTGCCGCCGCCCTTCCTGCCAAAATTGGCTTCTTCGCCCGATGAGGCGACTCTTCCGACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCAATGTGGCGACTCTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCCTTCTACTTCTTGGGGTTAGAAATATTCTCACCAGAGCCAAGGCAGCATCGTCGCTAAGCGACAATCCCTCTTCATGGGTTAGACATATTCTCGCCGAAGCCAAGGCAGCATCGCCGCTGAGCGGCGATCCCTCTGCAATTTTTGATGGCCAAGAACCGAGTTGTTAGCATCTTCATGAAAAGTGTTTCTCAACCTCGTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGGTGGGGTGTTAAGGATATTTAATAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAATATTTATCTTATTATCATAGGTATCGTTATTTTCATTTATTACTATTTCCATATCATTGTAATTTATTTGATTATAAATAAGGTAACTTTCACACCATTTAGGTGTGGTGGATTAATCAAACATTCACACAATGAGTATGTGTTGGGATATTGGCCGTCTTTCTTATTCTTGTACCTGGCTAACAGTGCCTCCATGATTGAGTGGGGAGGGGAGGTTGTGAATTCAGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGGTCATTTTCCTGAAGAGGGATTTGGGAAGGCAAGTTATTTTAGGGACATTCAAGTTGTTGACAGCTCTAACAATCTCAAAGCTCTCAAAGGGATTAGTACTTTTACACACAAATCCAACTGCTATGGTGTCCAAACCGGATACAGTGGGGATTGGGGCCATTACTTTTACTATGGAGGCCCTAGCAGAAACCAAAACTGCCCATGA ATGATTGAGTGGGGAGGGGAGGTTGTGAATTCAGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGGTCATTTTCCTGAAGAGGGATTTGGGAAGGCAAGTTATTTTAGGGACATTCAAGTTGTTGACAGCTCTAACAATCTCAAAGCTCTCAAAGGGATTAGTACTTTTACACACAAATCCAACTGCTATGGTGTCCAAACCGGATACAGTGGGGATTGGGGCCATTACTTTTACTATGGAGGCCCTAGCAGAAACCAAAACTGCCCATGA ATGATTGAGTGGGGAGGGGAGGTTGTGAATTCAGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGAGGCTGGTGGACTGCACACCTTAACCCAGATGGGCAGTGGTCATTTTCCTGAAGAGGGATTTGGGAAGGCAAGTTATTTTAGGGACATTCAAGTTGTTGACAGCTCTAACAATCTCAAAGCTCTCAAAGGGATTAGTACTTTTACACACAAATCCAACTGCTATGGTGTCCAAACCGGATACAGTGGGGATTGGGGCCATTACTTTTACTATGGAGGCCCTAGCAGAAACCAAAACTGCCCATGA MIEWGGEVVNSEAGGLHTLTQMGSEAGGLHTLTQMGSGHFPEEGFGKASYFRDIQVVDSSNNLKALKGISTFTHKSNCYGVQTGYSGDWGHYFYYGGPSRNQNCP Homology
BLAST of CmaCh20G000080 vs. ExPASy TrEMBL
Match: A0A6J1J6Z9 (uncharacterized protein LOC111484047 OS=Cucurbita maxima OX=3661 GN=LOC111484047 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50 Identity = 105/145 (72.41%), Postives = 105/145 (72.41%), Query Frame = 0
BLAST of CmaCh20G000080 vs. ExPASy TrEMBL
Match: A0A5D3DDU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001080 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.8e-39 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. ExPASy TrEMBL
Match: A0A5A7TEM0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00860 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.8e-39 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. ExPASy TrEMBL
Match: A0A0A0KWZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268070 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.8e-39 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. ExPASy TrEMBL
Match: A0A1S3BN34 (uncharacterized protein LOC103491632 OS=Cucumis melo OX=3656 GN=LOC103491632 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.8e-39 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. NCBI nr
Match: XP_022986227.1 (uncharacterized protein LOC111484047 [Cucurbita maxima]) HSP 1 Score: 207.2 bits (526), Expect = 6.8e-50 Identity = 105/145 (72.41%), Postives = 105/145 (72.41%), Query Frame = 0
BLAST of CmaCh20G000080 vs. NCBI nr
Match: XP_038901449.1 (uncharacterized protein LOC120088312 [Benincasa hispida]) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. NCBI nr
Match: KAA0040111.1 (uncharacterized protein E6C27_scaffold366G00860 [Cucumis melo var. makuwa]) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. NCBI nr
Match: XP_004149643.1 (uncharacterized protein LOC101217856 [Cucumis sativus] >KGN54023.1 hypothetical protein Csa_021666 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. NCBI nr
Match: XP_008449889.1 (PREDICTED: uncharacterized protein LOC103491632 [Cucumis melo]) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of CmaCh20G000080 vs. TAIR 10
Match: AT3G13510.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 153.7 bits (387), Expect = 8.3e-38 Identity = 73/105 (69.52%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of CmaCh20G000080 vs. TAIR 10
Match: AT1G55360.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 148.7 bits (374), Expect = 2.7e-36 Identity = 71/105 (67.62%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of CmaCh20G000080 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 140.2 bits (352), Expect = 9.5e-34 Identity = 67/104 (64.42%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of CmaCh20G000080 vs. TAIR 10
Match: AT5G56530.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 140.2 bits (352), Expect = 9.5e-34 Identity = 67/104 (64.42%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of CmaCh20G000080 vs. TAIR 10
Match: AT2G44210.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29 Identity = 59/105 (56.19%), Postives = 71/105 (67.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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